CmUC07G134780 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC07G134780
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	nuclear transcription factor Y subunit B-1-like
Location	CmU531Chr07: 22922329 .. 22923006 (-)
RNA-Seq Expression	CmUC07G134780
Synteny	CmUC07G134780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGGCCACAAACGAAACTTCACCACCACAGCCGCCGCCGTCAGTCCCATCGGCAGCCCCACCTCCGGCAACATCTCGGACAGCTCCACAAAAGAACAGGACAGGTTCCTTCCGATTGCAAACGTGAGCCGAATCATGAAAAAATCTCTTCCGGCGAACGCCAAAATCTCAAAAGAAGCAAAAGAGACCGTCCAGGAATGTGTGTCGGAATTCATCAGCTTCATCACCGGCGAGGCCTCCGACAAGTGCCAAAGGGAAAAACGGAAGACGATCAACGGAGACGATTTGTTGTGGGCGATGACTACTTTGGGATTCGAAAATTACGTCGGCCCTTTGAAGATTTATCTCAACAAATACAGAGAAACAGAGGAAGAGAAACATTCTTTAGCCAGACAGGACGATCCCTCCCTGTCTCCGGCGAAATCCGCCACCGAACAAATTATTGGTGGGAAATCGGCGAATTCGGTGATGGATTTTCAGAATTTCAATCCTGGGTTTTATTCATTTGGAAATCAAAATCAAAATCAGGGGAACCAGAAGAGTTTCAATATAATCGATGGCGTTGGATTTGGGGAAAGTTTGAGGAGTTTCAATATGAATGGAGTCCATGAAAATGGAGAAGGGAATCGAGCTCGAGCTATGGCGGCTCATCTTCAACAGAGCTCTGGTTGGTGA

mRNA sequence

ATGAGCGGCCACAAACGAAACTTCACCACCACAGCCGCCGCCGTCAGTCCCATCGGCAGCCCCACCTCCGGCAACATCTCGGACAGCTCCACAAAAGAACAGGACAGGTTCCTTCCGATTGCAAACGTGAGCCGAATCATGAAAAAATCTCTTCCGGCGAACGCCAAAATCTCAAAAGAAGCAAAAGAGACCGTCCAGGAATGTGTGTCGGAATTCATCAGCTTCATCACCGGCGAGGCCTCCGACAAGTGCCAAAGGGAAAAACGGAAGACGATCAACGGAGACGATTTGTTGTGGGCGATGACTACTTTGGGATTCGAAAATTACGTCGGCCCTTTGAAGATTTATCTCAACAAATACAGAGAAACAGAGGAAGAGAAACATTCTTTAGCCAGACAGGACGATCCCTCCCTGTCTCCGGCGAAATCCGCCACCGAACAAATTATTGGTGGGAAATCGGCGAATTCGGTGATGGATTTTCAGAATTTCAATCCTGGGTTTTATTCATTTGGAAATCAAAATCAAAATCAGGGGAACCAGAAGAGTTTCAATATAATCGATGGCGTTGGATTTGGGGAAAGTTTGAGGAGTTTCAATATGAATGGAGTCCATGAAAATGGAGAAGGGAATCGAGCTCGAGCTATGGCGGCTCATCTTCAACAGAGCTCTGGTTGGTGA

Coding sequence (CDS)

ATGAGCGGCCACAAACGAAACTTCACCACCACAGCCGCCGCCGTCAGTCCCATCGGCAGCCCCACCTCCGGCAACATCTCGGACAGCTCCACAAAAGAACAGGACAGGTTCCTTCCGATTGCAAACGTGAGCCGAATCATGAAAAAATCTCTTCCGGCGAACGCCAAAATCTCAAAAGAAGCAAAAGAGACCGTCCAGGAATGTGTGTCGGAATTCATCAGCTTCATCACCGGCGAGGCCTCCGACAAGTGCCAAAGGGAAAAACGGAAGACGATCAACGGAGACGATTTGTTGTGGGCGATGACTACTTTGGGATTCGAAAATTACGTCGGCCCTTTGAAGATTTATCTCAACAAATACAGAGAAACAGAGGAAGAGAAACATTCTTTAGCCAGACAGGACGATCCCTCCCTGTCTCCGGCGAAATCCGCCACCGAACAAATTATTGGTGGGAAATCGGCGAATTCGGTGATGGATTTTCAGAATTTCAATCCTGGGTTTTATTCATTTGGAAATCAAAATCAAAATCAGGGGAACCAGAAGAGTTTCAATATAATCGATGGCGTTGGATTTGGGGAAAGTTTGAGGAGTTTCAATATGAATGGAGTCCATGAAAATGGAGAAGGGAATCGAGCTCGAGCTATGGCGGCTCATCTTCAACAGAGCTCTGGTTGGTGA

Protein sequence

MSGHKRNFTTTAAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLARQDDPSLSPAKSATEQIIGGKSANSVMDFQNFNPGFYSFGNQNQNQGNQKSFNIIDGVGFGESLRSFNMNGVHENGEGNRARAMAAHLQQSSGW

Homology

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BLAST of CmUC07G134780 vs. NCBI nr
Match: XP_038898148.1 (nuclear transcription factor Y subunit B-like [Benincasa hispida])

HSP 1 Score: 424.5 bits (1090), Expect = 5.8e-115
Identity = 217/226 (96.02%), Postives = 220/226 (97.35%), Query Frame = 0


Query: 1   MSGHKRNFTTT-AAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISK 60
           MSGHKRNFTTT AAAVSP+GSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISK
Sbjct: 1   MSGHKRNFTTTAAAAVSPVGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISK 60

Query: 61  EAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNK 120
           EAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLK+YLNK
Sbjct: 61  EAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKMYLNK 120

Query: 121 YRETEEEKHSLARQDDPSLSPAKSATEQIIGGKSANSVMDFQNFNPGFYSFGNQNQNQGN 180
           YRETEEEKHSLARQDDPSLSPAKSA EQII GKSANSVMDFQNFN GFYS GNQNQNQGN
Sbjct: 121 YRETEEEKHSLARQDDPSLSPAKSAAEQIISGKSANSVMDFQNFNSGFYSLGNQNQNQGN 180

Query: 181 QKSFNIIDGVGFGESLRSFNMNGVHENGEGNRARAMAAHLQQSSGW 226
           QKSFNIIDGVGFGESLR FN+NGVHENGEGNRARAMAAHLQQSSGW
Sbjct: 181 QKSFNIIDGVGFGESLRGFNINGVHENGEGNRARAMAAHLQQSSGW 226

[Close]

BLAST of CmUC07G134780 vs. NCBI nr
Match: XP_008453748.1 (PREDICTED: nuclear transcription factor Y subunit B-1-like [Cucumis melo] >KAA0044740.1 nuclear transcription factor Y subunit B-1-like [Cucumis melo var. makuwa] >TYK16723.1 nuclear transcription factor Y subunit B-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 412.1 bits (1058), Expect = 3.0e-111
Identity = 208/225 (92.44%), Postives = 216/225 (96.00%), Query Frame = 0


Query: 1   MSGHKRNFTTTAAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60
           MSG KRNFTTT A VSP+GSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISK+
Sbjct: 1   MSGQKRNFTTTTAVVSPVGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKD 60

Query: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120
           AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY
Sbjct: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120

Query: 121 RETEEEKHSLARQDDPSLSPAKSATEQIIGGKSANSVMDFQNFNPGFYSFGNQNQNQGNQ 180
           RETEEEKHSLARQ+DPSLSPAKS+ E IIGGKSANSVMDFQNFN GFYS GNQ Q+QG+Q
Sbjct: 121 RETEEEKHSLARQEDPSLSPAKSSAEHIIGGKSANSVMDFQNFNSGFYSLGNQIQSQGSQ 180

Query: 181 KSFNIIDGVGFGESLRSFNMNGVHENGEGNRARAMAAHLQQSSGW 226
           KSFNIIDGVGFGE+LR FN+NGVHENGEGNRARAMAAHLQQSSGW
Sbjct: 181 KSFNIIDGVGFGENLRGFNINGVHENGEGNRARAMAAHLQQSSGW 225

[Close]

BLAST of CmUC07G134780 vs. NCBI nr
Match: XP_004149164.1 (nuclear transcription factor Y subunit B [Cucumis sativus] >XP_031745819.1 nuclear transcription factor Y subunit B-like [Cucumis sativus])

HSP 1 Score: 412.1 bits (1058), Expect = 3.0e-111
Identity = 209/225 (92.89%), Postives = 213/225 (94.67%), Query Frame = 0


Query: 1   MSGHKRNFTTTAAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60
           MSG KRNF  T A VSP+GSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE
Sbjct: 1   MSGQKRNFMATTAVVSPVGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60

Query: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120
           AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY
Sbjct: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120

Query: 121 RETEEEKHSLARQDDPSLSPAKSATEQIIGGKSANSVMDFQNFNPGFYSFGNQNQNQGNQ 180
           RETEEEKHSLARQ+DPSLSP KSA E IIGGKSANSVMDFQNFN GFYS GNQ QNQGNQ
Sbjct: 121 RETEEEKHSLARQEDPSLSPPKSAAEHIIGGKSANSVMDFQNFNSGFYSLGNQIQNQGNQ 180

Query: 181 KSFNIIDGVGFGESLRSFNMNGVHENGEGNRARAMAAHLQQSSGW 226
           KSFNIIDGVGFGE+LR FN+NGVHENGEGNRARAMAAHLQQSSGW
Sbjct: 181 KSFNIIDGVGFGENLRGFNINGVHENGEGNRARAMAAHLQQSSGW 225

[Close]

BLAST of CmUC07G134780 vs. NCBI nr
Match: KAE8637572.1 (hypothetical protein CSA_017849 [Cucumis sativus] >KAE8649163.1 hypothetical protein Csa_014945 [Cucumis sativus])

HSP 1 Score: 407.5 bits (1046), Expect = 7.3e-110
Identity = 208/224 (92.86%), Postives = 212/224 (94.64%), Query Frame = 0


Query: 1   MSGHKRNFTTTAAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60
           MSG KRNF  T A VSP+GSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE
Sbjct: 1   MSGQKRNFMATTAVVSPVGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60

Query: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120
           AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY
Sbjct: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120

Query: 121 RETEEEKHSLARQDDPSLSPAKSATEQIIGGKSANSVMDFQNFNPGFYSFGNQNQNQGNQ 180
           RETEEEKHSLARQ+DPSLSP KSA E IIGGKSANSVMDFQNFN GFYS GNQ QNQGNQ
Sbjct: 121 RETEEEKHSLARQEDPSLSPPKSAAEHIIGGKSANSVMDFQNFNSGFYSLGNQIQNQGNQ 180

Query: 181 KSFNIIDGVGFGESLRSFNMNGVHENGEGNRARAMAAHLQQSSG 225
           KSFNIIDGVGFGE+LR FN+NGVHENGEGNRARAMAAHLQQSSG
Sbjct: 181 KSFNIIDGVGFGENLRGFNINGVHENGEGNRARAMAAHLQQSSG 224

[Close]

BLAST of CmUC07G134780 vs. NCBI nr
Match: XP_022136742.1 (nuclear transcription factor Y subunit B-1-like [Momordica charantia])

HSP 1 Score: 374.8 bits (961), Expect = 5.3e-100
Identity = 196/225 (87.11%), Postives = 205/225 (91.11%), Query Frame = 0


Query: 1   MSGHKRNFTTTAAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60
           MSGHKRN  +TAAAVSP+GSPTSG+ISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE
Sbjct: 1   MSGHKRN--STAAAVSPVGSPTSGDISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60

Query: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120
           AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYV PLKIYLNKY
Sbjct: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVAPLKIYLNKY 120

Query: 121 RETEEEKHSLARQDDPSLSPAKSATEQIIGGKSANSVMDFQNFNPGFYSFGNQNQNQGNQ 180
           RETEEEKHS ARQDD   +P   + EQIIGGKSA+SVMDFQNFN GFYS GNQNQ    Q
Sbjct: 121 RETEEEKHSFARQDDQ--APPPGSAEQIIGGKSASSVMDFQNFNSGFYSLGNQNQTA--Q 180

Query: 181 KSFNIIDGVGFGESLRSFNMNGVHENGEGNRARAMAAHLQQSSGW 226
           KSFNIIDGVGFGE+ R FN++GVHENGEGNR RAMAAHLQQSSGW
Sbjct: 181 KSFNIIDGVGFGENFRGFNVSGVHENGEGNRGRAMAAHLQQSSGW 219

[Close]

BLAST of CmUC07G134780 vs. ExPASy Swiss-Prot
Match: Q0J7P4 (Nuclear transcription factor Y subunit B-11 OS=Oryza sativa subsp. japonica OX=39947 GN=HD5 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.0e-45
Identity = 91/104 (87.50%), Postives = 95/104 (91.35%), Query Frame = 0


Query: 24  GNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDK 83
           G   DS  KEQDRFLPIANVSRIMK+SLPANAKISKE+KETVQECVSEFISF+TGEASDK
Sbjct: 49  GGGGDSPAKEQDRFLPIANVSRIMKRSLPANAKISKESKETVQECVSEFISFVTGEASDK 108

Query: 84  CQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEK 128
           CQREKRKTINGDDLLWAMTTLGFE YVGPLK YLN+YRE E EK
Sbjct: 109 CQREKRKTINGDDLLWAMTTLGFEAYVGPLKSYLNRYREAEGEK 152

[Close]

BLAST of CmUC07G134780 vs. ExPASy Swiss-Prot
Match: O23310 (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NFYB3 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.0e-45
Identity = 93/109 (85.32%), Postives = 101/109 (92.66%), Query Frame = 0


Query: 28  DSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQRE 87
           ++ST+EQDRFLPIANVSRIMKK+LPANAKISK+AKETVQECVSEFISFITGEASDKCQRE
Sbjct: 16  NASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE 75

Query: 88  KRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLA-RQDD 136
           KRKTINGDDLLWAMTTLGFE+YV PLK+YL KYRE E EK + A RQ D
Sbjct: 76  KRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTTAGRQGD 124

[Close]

BLAST of CmUC07G134780 vs. ExPASy Swiss-Prot
Match: Q69J40 (Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB10 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.6e-43
Identity = 85/99 (85.86%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 29  SSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREK 88
           +S +EQDRFLPIANVSRIMK++LPANAKISK+AKETVQECVSEFISFITGEASDKCQREK
Sbjct: 18  ASAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEFISFITGEASDKCQREK 77

Query: 89  RKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEK 128
           RKTINGDDLLWAMTTLGFE+Y+ PLK+YL+K+RE E EK
Sbjct: 78  RKTINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGEK 116

[Close]

BLAST of CmUC07G134780 vs. ExPASy Swiss-Prot
Match: Q75IZ7 (Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB8 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 6.2e-43
Identity = 87/99 (87.88%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 29  SSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREK 88
           SS +EQDRFLPIANVSRIMKK+LPANAKISK+AKETVQECVSEFISFITGEASDKCQREK
Sbjct: 20  SSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREK 79

Query: 89  RKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEK 128
           RKTINGDDLLWAMTTLGFE+YV PLK YL+K+RE E E+
Sbjct: 80  RKTINGDDLLWAMTTLGFEDYVDPLKHYLHKFREIEGER 118

[Close]

BLAST of CmUC07G134780 vs. ExPASy Swiss-Prot
Match: Q9FGJ3 (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NFYB2 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 8.0e-43
Identity = 85/106 (80.19%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 27  SDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQR 86
           S  S +EQDRFLPIANVSRIMKK+LPANAKISK+AKET+QECVSEFISF+TGEASDKCQ+
Sbjct: 21  SSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQK 80

Query: 87  EKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLAR 133
           EKRKTINGDDLLWAMTTLGFE+YV PLK+YL ++RE E E+  L R
Sbjct: 81  EKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERTGLGR 126

[Close]

BLAST of CmUC07G134780 vs. ExPASy TrEMBL
Match: A0A5D3CXU2 (Nuclear transcription factor Y subunit B-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005600 PE=3 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.4e-111
Identity = 208/225 (92.44%), Postives = 216/225 (96.00%), Query Frame = 0


Query: 1   MSGHKRNFTTTAAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60
           MSG KRNFTTT A VSP+GSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISK+
Sbjct: 1   MSGQKRNFTTTTAVVSPVGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKD 60

Query: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120
           AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY
Sbjct: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120

Query: 121 RETEEEKHSLARQDDPSLSPAKSATEQIIGGKSANSVMDFQNFNPGFYSFGNQNQNQGNQ 180
           RETEEEKHSLARQ+DPSLSPAKS+ E IIGGKSANSVMDFQNFN GFYS GNQ Q+QG+Q
Sbjct: 121 RETEEEKHSLARQEDPSLSPAKSSAEHIIGGKSANSVMDFQNFNSGFYSLGNQIQSQGSQ 180

Query: 181 KSFNIIDGVGFGESLRSFNMNGVHENGEGNRARAMAAHLQQSSGW 226
           KSFNIIDGVGFGE+LR FN+NGVHENGEGNRARAMAAHLQQSSGW
Sbjct: 181 KSFNIIDGVGFGENLRGFNINGVHENGEGNRARAMAAHLQQSSGW 225

[Close]

BLAST of CmUC07G134780 vs. ExPASy TrEMBL
Match: A0A0A0KXV6 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G037610 PE=3 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.4e-111
Identity = 209/225 (92.89%), Postives = 213/225 (94.67%), Query Frame = 0


Query: 1   MSGHKRNFTTTAAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60
           MSG KRNF  T A VSP+GSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE
Sbjct: 1   MSGQKRNFMATTAVVSPVGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60

Query: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120
           AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY
Sbjct: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120

Query: 121 RETEEEKHSLARQDDPSLSPAKSATEQIIGGKSANSVMDFQNFNPGFYSFGNQNQNQGNQ 180
           RETEEEKHSLARQ+DPSLSP KSA E IIGGKSANSVMDFQNFN GFYS GNQ QNQGNQ
Sbjct: 121 RETEEEKHSLARQEDPSLSPPKSAAEHIIGGKSANSVMDFQNFNSGFYSLGNQIQNQGNQ 180

Query: 181 KSFNIIDGVGFGESLRSFNMNGVHENGEGNRARAMAAHLQQSSGW 226
           KSFNIIDGVGFGE+LR FN+NGVHENGEGNRARAMAAHLQQSSGW
Sbjct: 181 KSFNIIDGVGFGENLRGFNINGVHENGEGNRARAMAAHLQQSSGW 225

[Close]

BLAST of CmUC07G134780 vs. ExPASy TrEMBL
Match: A0A1S3BY72 (nuclear transcription factor Y subunit B-1-like OS=Cucumis melo OX=3656 GN=LOC103494392 PE=3 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.4e-111
Identity = 208/225 (92.44%), Postives = 216/225 (96.00%), Query Frame = 0


Query: 1   MSGHKRNFTTTAAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60
           MSG KRNFTTT A VSP+GSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISK+
Sbjct: 1   MSGQKRNFTTTTAVVSPVGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKD 60

Query: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120
           AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY
Sbjct: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120

Query: 121 RETEEEKHSLARQDDPSLSPAKSATEQIIGGKSANSVMDFQNFNPGFYSFGNQNQNQGNQ 180
           RETEEEKHSLARQ+DPSLSPAKS+ E IIGGKSANSVMDFQNFN GFYS GNQ Q+QG+Q
Sbjct: 121 RETEEEKHSLARQEDPSLSPAKSSAEHIIGGKSANSVMDFQNFNSGFYSLGNQIQSQGSQ 180

Query: 181 KSFNIIDGVGFGESLRSFNMNGVHENGEGNRARAMAAHLQQSSGW 226
           KSFNIIDGVGFGE+LR FN+NGVHENGEGNRARAMAAHLQQSSGW
Sbjct: 181 KSFNIIDGVGFGENLRGFNINGVHENGEGNRARAMAAHLQQSSGW 225

[Close]

BLAST of CmUC07G134780 vs. ExPASy TrEMBL
Match: A0A6J1C6A6 (nuclear transcription factor Y subunit B-1-like OS=Momordica charantia OX=3673 GN=LOC111008372 PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.6e-100
Identity = 196/225 (87.11%), Postives = 205/225 (91.11%), Query Frame = 0


Query: 1   MSGHKRNFTTTAAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60
           MSGHKRN  +TAAAVSP+GSPTSG+ISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE
Sbjct: 1   MSGHKRN--STAAAVSPVGSPTSGDISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60

Query: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120
           AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYV PLKIYLNKY
Sbjct: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVAPLKIYLNKY 120

Query: 121 RETEEEKHSLARQDDPSLSPAKSATEQIIGGKSANSVMDFQNFNPGFYSFGNQNQNQGNQ 180
           RETEEEKHS ARQDD   +P   + EQIIGGKSA+SVMDFQNFN GFYS GNQNQ    Q
Sbjct: 121 RETEEEKHSFARQDDQ--APPPGSAEQIIGGKSASSVMDFQNFNSGFYSLGNQNQTA--Q 180

Query: 181 KSFNIIDGVGFGESLRSFNMNGVHENGEGNRARAMAAHLQQSSGW 226
           KSFNIIDGVGFGE+ R FN++GVHENGEGNR RAMAAHLQQSSGW
Sbjct: 181 KSFNIIDGVGFGENFRGFNVSGVHENGEGNRGRAMAAHLQQSSGW 219

[Close]

BLAST of CmUC07G134780 vs. ExPASy TrEMBL
Match: A0A6J1IZK6 (nuclear transcription factor Y subunit B-1-like OS=Cucurbita maxima OX=3661 GN=LOC111481354 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.5e-95
Identity = 193/234 (82.48%), Postives = 202/234 (86.32%), Query Frame = 0


Query: 1   MSGHKRNFTTTAAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60
           M+GHKRN  TTA   SP+GSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLP NAKISKE
Sbjct: 1   MNGHKRN-PTTATISSPVGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPVNAKISKE 60

Query: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120
           AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYV  LK YLNKY
Sbjct: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVSTLKTYLNKY 120

Query: 121 RETEEEKHSLARQDDPSLSPAKS-----ATEQIIGGKSANSVMDFQNFNPGFYSFG---- 180
           RETEEEKHSLARQDD S SPAKS     + E IIGGKSANSVMDFQN N GFYS G    
Sbjct: 121 RETEEEKHSLARQDDHSPSPAKSTAAVCSAEPIIGGKSANSVMDFQNLNSGFYSLGAHNH 180

Query: 181 NQNQNQGNQKSFNIIDGVGFGESLRSFNMNGVHENGEGNRARAMAAHLQQSSGW 226
           N N + GNQKS++IIDGVGFGE+LR FN++ VHEN EGNR RAMAAHLQQSSGW
Sbjct: 181 NHNHHPGNQKSYHIIDGVGFGENLRGFNLSAVHEN-EGNRGRAMAAHLQQSSGW 232

[Close]

BLAST of CmUC07G134780 vs. TAIR 10
Match: AT4G14540.1 (nuclear factor Y, subunit B3 )

HSP 1 Score: 183.3 bits (464), Expect = 2.1e-46
Identity = 93/109 (85.32%), Postives = 101/109 (92.66%), Query Frame = 0


Query: 28  DSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQRE 87
           ++ST+EQDRFLPIANVSRIMKK+LPANAKISK+AKETVQECVSEFISFITGEASDKCQRE
Sbjct: 16  NASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE 75

Query: 88  KRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLA-RQDD 136
           KRKTINGDDLLWAMTTLGFE+YV PLK+YL KYRE E EK + A RQ D
Sbjct: 76  KRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTTAGRQGD 124

[Close]

BLAST of CmUC07G134780 vs. TAIR 10
Match: AT5G47640.1 (nuclear factor Y, subunit B2 )

HSP 1 Score: 175.3 bits (443), Expect = 5.7e-44
Identity = 85/106 (80.19%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 27  SDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQR 86
           S  S +EQDRFLPIANVSRIMKK+LPANAKISK+AKET+QECVSEFISF+TGEASDKCQ+
Sbjct: 21  SSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQK 80

Query: 87  EKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLAR 133
           EKRKTINGDDLLWAMTTLGFE+YV PLK+YL ++RE E E+  L R
Sbjct: 81  EKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERTGLGR 126

[Close]

BLAST of CmUC07G134780 vs. TAIR 10
Match: AT2G13570.1 (nuclear factor Y, subunit B7 )

HSP 1 Score: 174.1 bits (440), Expect = 1.3e-43
Identity = 98/169 (57.99%), Postives = 116/169 (68.64%), Query Frame = 0


Query: 19  GSPTS-GNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFIT 78
           GSP+S  N ++++ KEQDRFLPIANV RIMKK LP N KISK+AKETVQECVSEFISF+T
Sbjct: 21  GSPSSKTNNNNNNNKEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVT 80

Query: 79  GEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLARQDDPS 138
           GEASDKCQREKRKTINGDD++WA+TTLGFE+YV PLK+YL KYR+TE EK      + P 
Sbjct: 81  GEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEK-----VNSPK 140

Query: 139 LSPAKSATEQIIGGKSANSVMDFQNFNPGFYSFGNQNQNQGNQKSFNII 187
               +   +QI            Q  N   Y F  Q+QN  N    + I
Sbjct: 141 QQQQRQQQQQI------------QQQNHHNYQFQEQDQNNNNMSCTSYI 172

[Close]

BLAST of CmUC07G134780 vs. TAIR 10
Match: AT2G38880.2 (nuclear factor Y, subunit B1 )

HSP 1 Score: 163.3 bits (412), Expect = 2.2e-40
Identity = 81/124 (65.32%), Postives = 95/124 (76.61%), Query Frame = 0


Query: 14  AVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFI 73
           A +P      G  S  S +EQDR+LPIAN+SRIMKK+LP N KI K+AK+TVQECVSEFI
Sbjct: 2   ADTPSSPAGDGGESGGSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFI 61

Query: 74  SFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLARQ 133
           SFIT EASDKCQ+EKRKT+NGDDLLWAM TLGFE+Y+ PLKIYL +YRE E +     + 
Sbjct: 62  SFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGDNKGSGKS 121

Query: 134 DDPS 138
            D S
Sbjct: 122 GDGS 125

[Close]

BLAST of CmUC07G134780 vs. TAIR 10
Match: AT2G38880.3 (nuclear factor Y, subunit B1 )

HSP 1 Score: 163.3 bits (412), Expect = 2.2e-40
Identity = 81/124 (65.32%), Postives = 95/124 (76.61%), Query Frame = 0


Query: 14  AVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFI 73
           A +P      G  S  S +EQDR+LPIAN+SRIMKK+LP N KI K+AK+TVQECVSEFI
Sbjct: 2   ADTPSSPAGDGGESGGSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFI 61

Query: 74  SFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLARQ 133
           SFIT EASDKCQ+EKRKT+NGDDLLWAM TLGFE+Y+ PLKIYL +YRE E +     + 
Sbjct: 62  SFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGDNKGSGKS 121

Query: 134 DDPS 138
            D S
Sbjct: 122 GDGS 125

The following BLAST results are available for this feature:

BLAST of CmUC07G134780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898148.1	5.8e-115	96.02	nuclear transcription factor Y subunit B-like [Benincasa hispida]	[more]
XP_008453748.1	3.0e-111	92.44	PREDICTED: nuclear transcription factor Y subunit B-1-like [Cucumis melo] >KAA00...	[more]
XP_004149164.1	3.0e-111	92.89	nuclear transcription factor Y subunit B [Cucumis sativus] >XP_031745819.1 nucle...	[more]
KAE8637572.1	7.3e-110	92.86	hypothetical protein CSA_017849 [Cucumis sativus] >KAE8649163.1 hypothetical pro...	[more]
XP_022136742.1	5.3e-100	87.11	nuclear transcription factor Y subunit B-1-like [Momordica charantia]	[more]

BLAST of CmUC07G134780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0J7P4	3.0e-45	87.50	Nuclear transcription factor Y subunit B-11 OS=Oryza sativa subsp. japonica OX=3...	[more]
O23310	3.0e-45	85.32	Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q69J40	3.6e-43	85.86	Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q75IZ7	6.2e-43	87.88	Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q9FGJ3	8.0e-43	80.19	Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of CmUC07G134780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CXU2	1.4e-111	92.44	Nuclear transcription factor Y subunit B-1-like OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0KXV6	1.4e-111	92.89	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G0376...	[more]
A0A1S3BY72	1.4e-111	92.44	nuclear transcription factor Y subunit B-1-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1C6A6	2.6e-100	87.11	nuclear transcription factor Y subunit B-1-like OS=Momordica charantia OX=3673 G...	[more]
A0A6J1IZK6	1.5e-95	82.48	nuclear transcription factor Y subunit B-1-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CmUC07G134780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14540.1	2.1e-46	85.32	nuclear factor Y, subunit B3	[more]
AT5G47640.1	5.7e-44	80.19	nuclear factor Y, subunit B2	[more]
AT2G13570.1	1.3e-43	57.99	nuclear factor Y, subunit B7	[more]
AT2G38880.2	2.2e-40	65.32	nuclear factor Y, subunit B1	[more]
AT2G38880.3	2.2e-40	65.32	nuclear factor Y, subunit B1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 113..133
None	No IPR available	PRINTS	PR00615	CCAATSUBUNTA	coord: 103..121 score: 41.63 coord: 84..102 score: 38.52 coord: 65..83 score: 50.24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..146
None	No IPR available	PANTHER	PTHR11064:SF98	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-11	coord: 18..185
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 37..101 e-value: 6.6E-27 score: 93.6
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 24..157 e-value: 3.6E-47 score: 161.7
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 34..136
IPR027113	Transcription factor NFYB/HAP3	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 18..185
IPR003956	Transcription factor, NFYB/HAP3, conserved site	PROSITE	PS00685	NFYB_HAP3	coord: 68..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC07G134780.1	CmUC07G134780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding