CmUC07G134260 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACATTACCAAAACCAGTACTGCGCACAATCAGGAACCGACCAGTACGGCTACCCAATTCGCCAGACCGATGAATACGGCAATGTCATCTCCGAGACCGGTCAGTATGCCGACACAGTCCGCCGGACCGATGAGTTCCGACAGACCGACCAGTACGGCAACCCAATTCATGGGAGCAAGGACCAGCAGCAGGGTGGAATATTTCATCATGATAAGGTGGTGTTGACGGCAACCACGGAGAAGGGCGGTGGGCATCAGAAGAAGAAGGGGATAATGGAGAAGATTAAGGAGAAGCTGCCGGGAGGACACCATTGA ATGGAACATTACCAAAACCAGTACTGCGCACAATCAGGAACCGACCAGTACGGCTACCCAATTCGCCAGACCGATGAATACGGCAATGTCATCTCCGAGACCGGTCAGTATGCCGACACAGTCCGCCGGACCGATGAGTTCCGACAGACCGACCAGTACGGCAACCCAATTCATGGGAGCAAGGACCAGCAGCAGGGTGGAATATTTCATCATGATAAGGTGGTGTTGACGGCAACCACGGAGAAGGGCGGTGGGCATCAGAAGAAGAAGGGGATAATGGAGAAGATTAAGGAGAAGCTGCCGGGAGGACACCATTGA ATGGAACATTACCAAAACCAGTACTGCGCACAATCAGGAACCGACCAGTACGGCTACCCAATTCGCCAGACCGATGAATACGGCAATGTCATCTCCGAGACCGGTCAGTATGCCGACACAGTCCGCCGGACCGATGAGTTCCGACAGACCGACCAGTACGGCAACCCAATTCATGGGAGCAAGGACCAGCAGCAGGGTGGAATATTTCATCATGATAAGGTGGTGTTGACGGCAACCACGGAGAAGGGCGGTGGGCATCAGAAGAAGAAGGGGATAATGGAGAAGATTAAGGAGAAGCTGCCGGGAGGACACCATTGA MEHYQNQYCAQSGTDQYGYPIRQTDEYGNVISETGQYADTVRRTDEFRQTDQYGNPIHGSKDQQQGGIFHHDKVVLTATTEKGGGHQKKKGIMEKIKEKLPGGHH Homology
BLAST of CmUC07G134260 vs. NCBI nr
Match: XP_038888416.1 (dehydrin Xero 1-like [Benincasa hispida]) HSP 1 Score: 180.3 bits (456), Expect = 8.9e-42 Identity = 86/105 (81.90%), Postives = 91/105 (86.67%), Query Frame = 0
BLAST of CmUC07G134260 vs. NCBI nr
Match: KAE8649181.1 (hypothetical protein Csa_015017 [Cucumis sativus]) HSP 1 Score: 157.1 bits (396), Expect = 8.1e-35 Identity = 75/105 (71.43%), Postives = 86/105 (81.90%), Query Frame = 0
BLAST of CmUC07G134260 vs. NCBI nr
Match: XP_011653150.2 (dehydrin Rab18 [Cucumis sativus]) HSP 1 Score: 154.1 bits (388), Expect = 6.8e-34 Identity = 74/104 (71.15%), Postives = 85/104 (81.73%), Query Frame = 0
BLAST of CmUC07G134260 vs. NCBI nr
Match: KAA0044784.1 (dehydrin DHN1 [Cucumis melo var. makuwa] >TYK16681.1 dehydrin DHN1 [Cucumis melo var. makuwa]) HSP 1 Score: 151.0 bits (380), Expect = 5.8e-33 Identity = 75/105 (71.43%), Postives = 84/105 (80.00%), Query Frame = 0
BLAST of CmUC07G134260 vs. NCBI nr
Match: KAG7015320.1 (hypothetical protein SDJN02_22955, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 139.4 bits (350), Expect = 1.7e-29 Identity = 76/130 (58.46%), Postives = 85/130 (65.38%), Query Frame = 0
BLAST of CmUC07G134260 vs. ExPASy Swiss-Prot
Match: P28639 (Dehydrin DHN1 OS=Pisum sativum OX=3888 GN=DHN1 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 9.7e-07 Identity = 45/135 (33.33%), Postives = 58/135 (42.96%), Query Frame = 0
BLAST of CmUC07G134260 vs. ExPASy Swiss-Prot
Match: P09442 (Late embryogenesis abundant protein D-11 OS=Gossypium hirsutum OX=3635 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.6e-06 Identity = 40/110 (36.36%), Postives = 53/110 (48.18%), Query Frame = 0
BLAST of CmUC07G134260 vs. ExPASy Swiss-Prot
Match: P28640 (Dehydrin DHN2 OS=Pisum sativum OX=3888 GN=DHN2 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 4.8e-06 Identity = 47/132 (35.61%), Postives = 58/132 (43.94%), Query Frame = 0
BLAST of CmUC07G134260 vs. ExPASy Swiss-Prot
Match: P25863 (Dehydrin Xero 1 OS=Arabidopsis thaliana OX=3702 GN=XERO1 PE=2 SV=2) HSP 1 Score: 48.5 bits (114), Expect = 5.3e-05 Identity = 44/128 (34.38%), Postives = 61/128 (47.66%), Query Frame = 0
BLAST of CmUC07G134260 vs. ExPASy Swiss-Prot
Match: A8CVF3 (Dehydrin DHN1 OS=Avicennia marina OX=82927 GN=DHN1 PE=1 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.5e-04 Identity = 50/150 (33.33%), Postives = 60/150 (40.00%), Query Frame = 0
BLAST of CmUC07G134260 vs. ExPASy TrEMBL
Match: A0A0A0KUH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G045050 PE=3 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 3.9e-35 Identity = 75/105 (71.43%), Postives = 86/105 (81.90%), Query Frame = 0
BLAST of CmUC07G134260 vs. ExPASy TrEMBL
Match: A0A5D3CXL0 (Dehydrin DHN1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005130 PE=3 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 2.8e-33 Identity = 75/105 (71.43%), Postives = 84/105 (80.00%), Query Frame = 0
BLAST of CmUC07G134260 vs. ExPASy TrEMBL
Match: A0A6J1EUD8 (dehydrin DHN1-like OS=Cucurbita moschata OX=3662 GN=LOC111436004 PE=3 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 4.2e-29 Identity = 75/132 (56.82%), Postives = 86/132 (65.15%), Query Frame = 0
BLAST of CmUC07G134260 vs. ExPASy TrEMBL
Match: A0A6J1C526 (dehydrin DHN1-like OS=Momordica charantia OX=3673 GN=LOC111008439 PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.7e-22 Identity = 67/123 (54.47%), Postives = 76/123 (61.79%), Query Frame = 0
BLAST of CmUC07G134260 vs. ExPASy TrEMBL
Match: A0A6J1C5G3 (dehydrin Xero 1-like OS=Momordica charantia OX=3673 GN=LOC111008435 PE=3 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 8.4e-22 Identity = 65/136 (47.79%), Postives = 78/136 (57.35%), Query Frame = 0
BLAST of CmUC07G134260 vs. TAIR 10
Match: AT3G50980.1 (dehydrin xero 1 ) HSP 1 Score: 48.5 bits (114), Expect = 3.8e-06 Identity = 44/128 (34.38%), Postives = 61/128 (47.66%), Query Frame = 0
BLAST of CmUC07G134260 vs. TAIR 10
Match: AT5G66400.2 (Dehydrin family protein ) HSP 1 Score: 40.8 bits (94), Expect = 7.9e-04 Identity = 40/142 (28.17%), Postives = 58/142 (40.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|