CmUC07G133760 (gene) Watermelon (USVL531) v1

Overview
NameCmUC07G133760
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
LocationCmU531Chr07: 20117331 .. 20128012 (+)
RNA-Seq ExpressionCmUC07G133760
SyntenyCmUC07G133760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAGAAGAAGGGAAATACGAAGAAAGGAGCATCTAACCCCACATCCGGTCCTCAAGATTCGATCACTCTGAGGCAGGAAATTACTGGGAAGATCAAACCCAAAGTCCCTAACAATGTCAAAGTTTATTTGAACCATTTAGAAAACTTAGCGACTTGGGCTAGTGGTCAACCGTCTATTCCTTCATTGGCTGCTTTCTTTGGGCAGCGCCTCGCAGCTGCAGCAGAGTCTTTGGCGGTCACTCCCGACGCTTCTCTATTTCTCTGCCAGAGGTTCGTATGTCTTCTCCCCTTTACATTCGTTTAGCTTTGCATGCCTAGGTTTGTTGTTTTTGTAGTGTTTATAATAGGGTAAGTTCATGACTATTGATTGTATTTGGGAATTGGAAGATTTTATTTAACTTTTCTGATTAGTTCTAAGTGACAGTAATCTGATGTAATTGAAATTTGAGTATGGAGAATGAATGCTCTTTATGGGGCAAAATGTTGTTTTACTGCAAAGATTGTATTCTGCCCTTTGCATTTGTTTGGCTTGCTACAAAAATTGTGATTGAGAAGTACTTTCAAAAACATGTTTAGTAATATGCAGGAGATATCATCTAGCAACAATTTAACAGAATAGGTTTTATATTTCATATCTTGTCCAGGAGTTTGTATTGTAGCAGGGTTGGGGTGTAAGGTTGTGTATTGTGCTTATCTTATTCGGGCAGATGCCCTCGGGTGATAATCAAATAACCCCAGAGACTAAAGTTTTGGGGACCTATGAAGGAAAAAGTCTCATTTAAGCTTGACAAAGGGTGGAAATTAACTGTAGCTTTAATCAAGAGGAAAAGGAGGAACTTTTCTTGGAATGGTTCTTTAGAGGGTAGCCATCTGGTGAATTGGAAGGGAGTATCCTTGCCCTTGTTAAATGGAAGCTTCGGAATTGGAAACTTGAGGAGAGGCAGTGAAGCCCTTGTGGCAAAGTGGTTTTGACACTGCTAGGGGAGCCTGACTTAATCAGGCACCAAGTAGTGCATGGTGTCTATGAGTTTGGACAGGTATGCAAAGAAGCAAAATGGAGGTAGTGGTAGAAGCCCTTGGTGGAATATTACTATGTTGAAGGGTGTAGATTTCATTTTCAATCACTCTATGGTCAAAGTTGGAGATGGAAAGAACAAAATTTTGGAGGATCTGGATGGATAGTCAACCATTAGCCATGAATTTTCCTAAGTTAATGCAATGGTGGAATCCAAACTTTAAGCAATCAATGGGTGCGGGATAGCCCCCTCCGCTCTGTGTTTCCTCATCTATGTTACTTGTCATCCTTTAAAAATCATCCGGTCTCTCGTATTTTGGTCTGGTCAAGGATCTCTGTGTCTTTTTCTTTTGGGTTTTGTCGTAATTTATCCAATAAGGAGACAACGGAGGTTGCCTTTCTTCTTTCTTTGTTGGAAGAGTGTAATTTTAGGGTGGGGAGAAGAGATGTTCGTGTTTGGAGTCCTAATCCTATTGAAGACTTTTCGTGTAAATCTTTCCTTAGGTTGTTATTGGATCCATCTTTTGTTAATGAGTCGGTCTTTGATGTGCTTTAGAGGATGAAGATACCAAAGAAAATAAAGTTCTTTACTTGGCAAGTTTTGCTATGTCTAGTGAATACTTTGGATAGGCTTGTTAGGAAGATGACTTCGTTAATGGGTCATTTTTGCTCTATTCTTTTTCGGAACACGGAGGAAGACTTGGATCACCTTCTTTAGGATTGTCAGTTTGCTAGGGCTATGTGGATTTTTTTCTTGCAGGAGTTTAATATTCAGGTTGTTTGGACATAGGGATATTTGTGCGCTAATTGGGGAGTTCCTCCTCCATCTGCCTTTCAGAGAGAAAGGTCATTTTTTTTTGTTTGTTTGTTGAGGCATGCGCTTTATTATGGGATATTTGGGAGGAGAGGAACAATAGAGTGTTAAGAGGTTTGAACAGGGACCTGAATGAGGTTTGGTCCTAGGTTTCATGTTTTGCTTTGGGCTTCAGTTTTAAAGCTTTTTTGTAATTATTCCTAGGTAACATCTTACTTAGTTGCTAAGAAGCACCCACTTTATTTTGGCTAGCGTGTCCATGTTCAACACGTGTCAGACACTTGGACACCGACATTTGTTGGACATGTATCGGACACTTAAAGTGCAACAAATGTGTTACACATGCATTGAACACTTGTTGAGTAGACTAAAAAGACACATATGAGTCTGACAATAATAACTTTTGAGTGTGAAATACATCAAGCTAAGTCTTTTAAGCATATAAATGCATCGATCATTTACTTTGAATTTTATTTTGGTATGAAAATGATATATATTTTTAAAAATGTATATTTTAATAAACGTATCCTTGTCATGTCATGTCCTAAAATTTAAAATATGTCGTGTGGTTGTGTCTGTGTCGTATTCATGTCTCGTATATGTATCTGTGCTTCTTAGCTTAGTTGGAAGTCCTTTATTTAGAATGGGTGCTTTTGTGGGCTTTCTTTTTATATGCCCTTGTATTCTTCAATTTTTTCTCAATGAAAGTTGTTGATTCTATCCAAAAAAGAAAAAAAAAAAACTTTAAGCAATCAACAAGCACTGATATTAGCTATCAAGAAACTGGAATATAATGACAAGGAGGAATCTTTCGGGTGAAGATTTGAAGAGTTCGATGCTATTTTGAGACTACCAGTAAACAGACTAATTGGTGCTGGAGTGGATGAAAGAAGCTGGAATTTTGTACCTCTGGCAATCGCAGTGGCTTTGCCTGAATGATTGCAGGAGCTCTAAGAAGAGAGCTTTCAGAGGTAGTGGGAAAAATAACATGCCTCAGAAAGATCTAGCCTGCTTGAATGGTCTTTTTTTCCCTTAGTTTTTGTTTGTTTGTTGAGAACGTTACAACAAAGATGCGCTATGGTGGTCTTGAATCTTTATGGGCGCTTACATTCCATGGAAGAGTACGGAGGAACTGACCACCTTGTCTTCCCCGGCTTTTTTGGCGATTGATTTTTGGAACTCATTAGTCATGATTGTAAATTTTTGGATACTTTGGGGTTTTTGGTTGCTCTTTGAAGGCTTGCATATCCCGTATGCTATGTGGTCATCTTTCAAGAGAAAGGCAGGAAGCTGTGTGCAATCAAATTTGTTATTTGGAGCATGTGAGTTGGGAAGAAACAGAAAGCGTGTAACAGAAGGCTAAAGACCTGACCACCTTGTTCTTTAATAGTTCTTTAGATCGTGGGTTTAACCACTATATTCCCCTCGTAGTTAGTACTAATTGAGGTGGGTTTTGTTTTGTTTTATTTTTTTATGACAGAATTCTCTTCTTTCTCCTATGATTTCCATCATTCCACGGAACTCATAATCAAATAATGTTTCCATGGATCTCAGTACTCATAGGACAAGTCTGAGGAAATTACAATATTAGTTAAAGATCAGTTATTCTTTTTATGCTTATTGGTTACTGTCTTATTGTTAAATTTTTACAATCATGTCCAAAAAAACCCACTGATGTTTTTAATTCAATACTCGTATGGAGTGGGCACCTGATTCGAACCTTGTTCCATGTTAAGGTCTTCATATCACATTTGAATGTTGTTTTGGCATCTTACTTGAATTTTCTTTGGCCACAAAACTAGCCAATCTTACCTGCTCCATTGTATTACATTTAGGTGTGAAACAATTCTTCAACCTGGTTCTAACTGCTCAGTACGAATAGAGAAGAATAACGTCAAGAGATGTCGGAGACGCAACAAATCAAGTAATTTGACACAGAACGTTGTGGTGTATTATTGCCACTACTGCTCATGTAGGAACAGAAAGAGAGGTACTCCCAAAGGTCATATGAAAGGGCTTTATGACACGAAGTTTGTAAGCAAGGTGAAATCTGTGGATGTCAAGGATGGTAAACAATGTGAAAACGAGAGTCTTACCATGGATGTTCCTAAAATTCTTCCTTCTACAACCAGAGACAGTCTAACTATTGATACTCCTCCAACTGAGGACATTCCCACGGTAGATGCTCCTGCAACTCCTCCAACCATGACCGGAATGACTCTGTTGAATTTGAAGAGGAGAAAGCGGAAGAAACCATCATCTAAGAATCAAACTGAACCTGAAAGTTGTTTGGCTTCAACAGCAGATGGGGACAAAACTGAAGGCACATCCAAAAGGAAGCGTAATAGAAAATCATGGGCAAGTTTGAAGGAAATTGCTAAGAGGAATGAAGAGAGTGGTAAACAAAACGTGGCTGTATTGGCAATTCCATTCTCCTTATGACAAAGACACTTTCTAAACACCAAATAGACAACTTGTTTTGTAAATTTGTAGGCGTTTCTCATTGGTGTGTGCGCGAGCTTATTATTGAACCAAATCTATAAAATGAGGAATTGATTTTATTTTTTACCTTCTGTTCTCTTTTCAGCAATTGTTTGGTTTTCAAATGGGATGATTTGAATTTGCCATTGTAGACTTGTTGAGAGTAGACCATTATGAAAAATACTCATGAACATATTAATAATAATATTATTATAACTTATTTTTATTACTATTTTTCTTTTTCTAAGGTTGCAATGTTACCCTAACCATTTGTAAATATTTTTAATTCAATCTTAGTTTTCATTCAACGTTCAATTAGAATTTTTACTCTAAGTAGTTTTGAAACAATTATTAAAGGTCAAAGGTAAAGTATTGCAATTTTTTTTGTTTGGAAGAAAAGATACTTTTTAAACAAATAATAAAGTTGAAGGGTTCTTAAGTTTATGTAATTAAAAAAAAAAATCAATTATGGTGGGTTAAAATTTGAAAGAAAGGATAACGGAAATCATACAAAATTGATAAGAAGATTTGGAGACAATGAAAATGTTTTCAAATGTTTGAAAATAGTTAGTAGTTAGTTTAGTGAAAGGATTACTGGAACTACCCACTTTTGTTAAGATGGCCTATTTGAACTCATTTGGGAAAAAATGTTCTTTTGTCTCATTCGTGTTTCATTTAAATATTTTTTTATGAGAACTGTTAGAAGTGTTCAAAAAAATCTGATGGCCCAAAAACTCAATTAACCAAACCCAACTCGTACGATTTAGGTTGGGTTATCAACTCATTTGGATTCAAATAAATGAAAATGTTGATTATTTCCTTTTTTTTGTTTATATTCTCCCTTTATATTTATTGTAAAAATATTTGCTATATTTATTTTTTTCTTATTTGTAATAGGTTTTCTTTTATTTAAGAAAACCCTTGTCTAATAAAGAAAATAAGAGAAATAAACTATTTTCAGCATGGTATCATAGCATATTACTTGAAACTCTAATTTTTCTGAAAAAGAAACATAAACCCTAATCTAACCTAATTTGTCGCCGCCAACTTGCCGCCGCCGTCGCGCTCCAGATCTTCGTCGGACGTCTCGCCTCAGTCACCGAACGACGCCCAGGCTCCTAGTTGATGCTAGACCGCCGGTTGTTTATGGATCTCGTGAGCGCAGAAGAAAGCCGTGTGCCCTAGCCGTCACCGACGCCGACGCTGCTGTGACCTGGGTTCACTCCTTCTCTGCCGGCCGACCAAGTCTACACCATTGGCCGAGGGATTCCCGGCCAGTTCCAGCGATTCTCTGGTGGTTCCTTATTCTATCGCTGAGTGGAAGTTTTTTGGGTTTGTTAAAACCGTTTTTTGTTCTTTTTTTTTTTTTCCTTTTCAGATCTATTTTTGTTTGGGTTGTGTGCTTTTATCTCTTCAATATGTCAAAGACTAAGGTATCTGCCACCAAAGTCTTCGACAATCAGATCCATTCCAACACTCTCACTGTCCAAATCACCACCATTCGACTTAACGGGGATAACTTTCTTCGTTGGTCCCAAAGTGTTCGGATGTACATTCGTGGCCAAGGGAAGATAGGGTATCTCACTGGAGAAAAAATCGCTCCAAGTCTGATGACCCTTTATTTGCTATGTGGGACGTGAAAAACTCCATGGTTATGATATGGCTCGTCAACTCTATGGTGGAAAACATCCGTAGTAACTACATGTGCTACACTACGACCAAGGAATTATGGGACATGTGACTCAAATGTATTCTGATTTGGGTAACCAGTCACAAGTGTTCGAGGTGAATCTTAAGTTGGGTGATATACAACAAGGAGGTAACTCAGTTACACAATATTCTCACTCTATGAAGAGGATGTGGCAAGAACTTGATCTATTTGATACGTATGAGTGGAAGTCCACAGACGACCAAAAACATTATCGGAAAACTGTTGAAGATGATCGCATTTACAAATTCCTTGCTGGCCTCAATGTTGAGTTTGATAAGGTTAGAGGTAGGATACTTGGAAAAGTACTCTTCCAAATATTAACGATGTTTTTTCTAAAGTTCGCAGGGTGGAAAGTCGCAGGAATGTTATGATTAGAAAGAAGGCAGTTGACTCAGTTGAAAGTTCCGCGTTAGTGATTGAAAATACTGCAATTAAAGCTTTTGATCAATCCAAAAAAAATCATGACAAGCCTCGTGTCTAGTGTGATCACTACAACAAACCCCATCATACGAGGGAAACTTGTTGGAAACTACATGGCAAACCTGCAAATTAGAAGAGCAAAATCATACTACGTTCTATCCTTCATGTTCCTCAACTAGCTTGTAATTTATTATCTGTGAGCAAAATATCTAAGGATGTTAATTGACGTGTTATCTTTTGTGAAACTCATTGTCTCTTTCAGGATCAAGACTTGGGGTAGACGATTGGATGTGCTAGGATGATTGATGGTCTCTATTACTTTGATGAAGTTTCAGCTAGTCATAAAAAGATTCAGGGCTTGAGTAGTGTCAGTTCTCTATGCTTTGGCATCATAGATTAGGATATCCTAATTTCGTTTATTTAAAGTACTTGTTTCCTGATTTATTTAAAGGAATTGATTGTTTTGTTTTTCCATGCGAAGATAGCATTTTTGCCAAACATCATCAATCTACTTTTTCGCCCAAATCTTATAAATCTTCATCACCTTTTTACTTAATTCATACTAATGTTTCGGGTCCGTCTAAGGTTTTGACTAAAAATGGCAAGCATTAGTTTGTTACCTTTATGATGATCACATCCGTTTAACTTGGCTTTACTTGCTAACAAAAAAGTCGAATGTATTAGAGATCTTTGTTCGTTTTTATAAAATGATTGAGACTCAATTTCAAGCTAAAATTTGCATTCTTCACTCGGATAATGGAACTGAATTTTTTAACGAACCACTAACTGATGGATAATTAAACATGCAGCGGAAGTTAATTTGATTAATTTTCATGCTAAGATGCTTAATTTAGAGGATTAAACATGCAATTAAAAAGAAAAACTAAAGTTTCAAGAACACTTACATTTGAAGCTCCAAATTCTCCTTCAATTCTTAATGAATTTCAGCACCACTTGGTTGTAGACCACCACAAGAGTCTTTTCTACTATTCTCTAGGCTTAGATTGGATGGTGGGATCCAAATTTGTGGTGAATTTGAGTAGGAATGAAGGTTGGGAAGAAGATGAACAATTGATGGAATTTTGCAAAATTAACCCTTTAATTTCACAAAATTCTTAACCATTTTTATGTCAAAATCATCTCTATTTATTAAAGAATAACATGCAATTCAATTGTATCAAAATTTGACAACACAAAATGGTTAATTTGTTGGTTAATTGTGAAGAAGACAACCAAACTCCTAGCTTAGTTAGGAGGAAATTCCAATCTTCAAAAATCAATTTTAAAATCAATTTTCAATGAATTTCCAACAATTGAATTAAAATTGATTTTTAATTTCAAAAAATAATTAAATAATTAAATAAATAAATAATAATTTAATATTTAATTAATTAAATATTATTTTAATATTAAATAATAAAATAATATTATTTTTTCCACTTGTCCCAATTTTCTAAAAACCGATATGAATCTCTATTCATATGATTAATATTTAAATCATATTTAAATATTATAATTAACTTTATTTGCATGTTTAATTCGTAATTAAACGTCGATATATCGTATATATTTGACTTTCATTCCTTAAGCCAATATTTGAACGGTTCAAACTTATTCACCACACTATCTAAGATTTTAGTTCATTTATGAGTTAGTAGAGGGACCTAATAAACCTACAGATCATGAGCTCCAATGATTCAAGATTAACCGGTCAAACTCTTTAACATAGTTAACCAACATTCGTTAACTAACGGGACACTCCACTAAAGCCCGTAGCTGCACTCTCCTCACTGTAGATATATTTGTGTCCATTTGATATAATTGTCATCGATAAGTCAATCCTTCACAGGTCGTTCATAACTTCAGCTAAGTCAAATACCGATCTACCTCTGAATTACATCTTTTCTCCTTAAGTACCACTGTCCCTCTGATGAACAATTGATTTAGGATCTAATCACTAAATCCATTCCCTCTCGGCCTAGTGAGAGGATGGAGCCCCTTGTTCAAGTCCTGGGAACAATACTTAAGATAACAACCTTTCTACTATCCCTAACTTGGGTAGGAGTGAATTTCGTCTTGCAAATTCTATGTCCCCAACTATCTACCGGGTCTTATCCCTGAAATAGGAGGAATGTTAAGCAGCGCTATTGAGCTTACTCTCACCTATGCAGATCAAGGGATAATTCTGAATAAACAGGAGTTCATAGATAACTCAAGATTCAGATCAAGTTATCTAGGTCATCGATAAGTGAAATTAATCAGTGTTAATCGTAAACGGTGTTAATACATATCCCTGATTATTTCAGGGTCAGTCTTACACAATCTTATTATGTAGAATACCCCCGCTCATATGTCTCTACATGAATAAATCAGGATCACTTCATTTATGCACCTTACAACATTTGTACCAATCATGAAGTGGACCATATTCAATAGTGTCTCTAGGAAGAGGTACCCGACCTGATCCATGTACTATAGACTTATTTAGGCTACTTACTCGAACTTGATTCTGTTTATGTCTCTACATAAAGTCCAAGTACTCATGATAATAGCCAAGGGTTCGTAGTTTAATTGGATTTAGAGTTAATAAATAATTAATTCACTTGAATAACTTCATATGTACTAAAATTCATTTATTTACAAAAACTACGAGTTTTTAGGACATACAACCCAACACTAAACACCTTTTACATGATAAGGGCATCTTTCATCAAGCTACATGTCGCGATACTCCTCAGCAAAATGGTGTTGCTGAATGGAAAAATCGACATTTGCTTGAAGTTGCTCGTGCCCTTATGTTTTCTATACATGTTCCAAAATATTTATGGGGGGATGTTGTTCTAACCGCTGCTTACCTAATCAATAGAATGCCTACTAAGGTGTTGAATTTTAAAACTCCACTACAGCACCTCAAAGAATTTTTTCCTACTACCCGACTATTCTCAGAGTTACCTTTAAAAGTTTTTGGGTGTACTGCTTATGTTCATCGAACCCTCCTTTCCCAAACTAAATTAGACCCTCGGGCCATTAAATGTGTTTTTGTAGGCTATGTTTCCCTTAAGAAAGCATACAAATGTTTGACCCCCTAGCTAACAAGTATTTTGAGAGTATGGATGTGTCCTTCGTAGAAAATCAATCTTTTTTTAGCCCAACTTCTCTTTAGAGGGAGTCATCTCTTATTGAAGAGAATTTTTGGGACACTTCACCTCTCCCAAACATCATTAGTCCTGAAATTATGAGCCCTAGTCCTTCGATCCCAAGTGTGGAAAATTCTCCGACAGGGGGAGAAACACTACAAACAGATCTGACAGGTCGAAATCCTAAACTTCAGATTTATACTAGAAGAAACATAACTCAAAGGGATAGAAATCAGACAGTCGAGCTAACACATGACTAATTTGATACTCTAGTGAATGATCCTGAAAATCCGAATATGTCTCTTAGTCCTTCCTCTCATAATATGTTGCTTGATGTCTTTGATCTTGATATTTCAATTGCCCAGAGAAAAGGTACCCGCCAATGTACAAAATATCACATTGTGAACTATCTTTCCTATCATAGATTGTCTGATAGTCATAGAGCTTTCACATCCAAAATAACCAACCTATTTGTACCAAGGAATATACAGGAAGCTCTAAATGATTCGAATTGAAAATTAGTAGTGATGGAAGAGATGAACGCGCTGAAACAAAGTGGTACTTGGGGCATAGTTGATCTACCAGAAGACAAGATAGCAATGGGATGTAAGTGAGTTTTCACGATAAAATGTAATGTTGATGGTAGTATCGAAAGGTACAAGGTCAGATTAGTGGCTAAGGGATTCACCCAGACCTATGGAATTGATTATCAAGAGACATTTGCCCCGTAGCTAAAATTAACTCAATTAGAATTTTGCTCTCTGTTGCAGTTAATTTTGATTGGTCACTTTATCAACTTGATGTTAAAAATGCATTTCTTAATGGGGAACTTGAAGAAGAAGTATTTATGGATTTACCACTTGGTTTTGAAGCTGACCTTGGGATTAACAAGGTATGTAAATTAAAAAAATCACTATACGGCCTTAAACAGTCTCCTAGAGCTTGGTTTGAACGTTTTGGAAAGGCAGTCACAAGCTATGGATTCAGCCAAAGTCAAGTCGATCACACTATGTTCTACAAGCATACGAGAAATGACAAGGTTGTTGTTCTGATAGTGTATGTCGATGATATCATTCTTACAGGCAATGATGAGACATGA

mRNA sequence

ATGGCAAAGAAGAAGGGAAATACGAAGAAAGGAGCATCTAACCCCACATCCGGTCCTCAAGATTCGATCACTCTGAGGCAGGAAATTACTGGGAAGATCAAACCCAAAGTCCCTAACAATGTCAAAGTTTATTTGAACCATTTAGAAAACTTAGCGACTTGGGCTAGTGGTCAACCGTCTATTCCTTCATTGGCTGCTTTCTTTGGGCAGCGCCTCGCAGCTGCAGCAGAGTCTTTGGCGGTCACTCCCGACGCTTCTCTATTTCTCTGCCAGAGGTGTGAAACAATTCTTCAACCTGGTTCTAACTGCTCAGTACGAATAGAGAAGAATAACGTCAAGAGATGTCGGAGACGCAACAAATCAAGTAATTTGACACAGAACGTTGTGGTGTATTATTGCCACTACTGCTCATGTAGGAACAGAAAGAGAGGTACTCCCAAAGGTCATATGAAAGGGCTTTATGACACGAAGTTTGTAAGCAAGGTGAAATCTGTGGATGTCAAGGATGGTAAACAATGTGAAAACGAGAGTCTTACCATGGATGTTCCTAAAATTCTTCCTTCTACAACCAGAGACAGTCTAACTATTGATACTCCTCCAACTGAGGACATTCCCACGGTAGATGCTCCTGCAACTCCTCCAACCATGACCGGAATGACTCTGTTGAATTTGAAGAGGAGAAAGCGGAAGAAACCATCATCTAAGAATCAAACTGAACCTGAAAGTTGTTTGGCTTCAACAGCAGATGGGGACAAAACTGAAGGCACATCCAAAAGGAAGCGTAATAGAAAATCATGGGCAAGTTTGAAGGAAATTGCTAAGAGGAATGAAGAGAGTGATCTTCGTCGGACGTCTCGCCTCAGTCACCGAACGACGCCCAGGCTCCTAGTTGATGCTAGACCGCCGGTTGTTTATGGATCTCGTGAGCGCAGAAGAAAGCCGTGTGCCCTAGCCGTCACCGACGCCGACGCTGCTGTGACCTGGGTTCACTCCTTCTCTGCCGGCCGACCAAGTCTACACCATTGGCCGAGGGATTCCCGGCCAGTTCCAGCGATTCTCTGGTGGTTCCTTATTCTATCGCTGAGTGGAAGTTTTTTGGGAATTATGGGACATGTGACTCAAATGTATTCTGATTTGGGTAACCAGTCACAAGTGTTCGAGGTGAATCTTAAGTTGGGTGATATACAACAAGGAGGTAACTCAGTTACACAATATTCTCACTCTATGAAGAGGATGTGGCAAGAACTTGATCTATTTGATACGTATGAGTGGAAGTCCACAGACGACCAAAAACATTATCGGAAAACTGTTGAAGATGATCGCATTTACAAATTCCTTGCTGGCCTCAATGTTGAGTTTGATAAGGGCATCTTTCATCAAGCTACATGTCGCGATACTCCTCAGCAAAATGGTGTTGCTGAATGGAAAAATCGACATTTGCTTGAAGTTGCTCGTGCCCTTATGTTTTCTATACATGTTCCAAAATATTTATGGGGGGATGTTGTTCTAACCGCTGCTTACCTAATCAATAGAATGCCTACTAAGAGGGAGTCATCTCTTATTGAAGAGAATTTTTGGGACACTTCACCTCTCCCAAACATCATTAGTCCTGAAATTATGAGCCCTAGTCCTTCGATCCCAAGTGTGGAAAATTCTCCGACAGGGGGAGAAACACTACAAACAGATCTGACAGTGAATGATCCTGAAAATCCGAATATGTCTCTTAGTCCTTCCTCTCATAATATGTTGCTTGATGTCTTTGATCTTGATATTTCAATTGCCCAGAGAAAAGTAGTGATGGAAGAGATGAACGCGCTGAAACAAAGTGGTACTTGGGGCATAGTTGATCTACCAGAAGACAAGATAGCAATGGGATTTAATTTTGATTGGTCACTTTATCAACTTGATGTTAAAAATGCATTTCTTAATGGGGAACTTGAAGAAGAAGTATTTATGGATTTACCACTTGGTTTTGAAGCTGACCTTGGGATTAACAAGGTATGTAAATTAAAAAAATCACTATACGGCCTTAAACAGTCTCCTAGAGCTTGGTTTGAACGTTTTGGAAAGGCAGTCACAAGCTATGGATTCAGCCAAAGTCAAGTCGATCACACTATGTTCTACAAGCATACGAGAAATGACAAGGTTGTTGTTCTGATAGTGTATGTCGATGATATCATTCTTACAGGCAATGATGAGACATGA

Coding sequence (CDS)

ATGGCAAAGAAGAAGGGAAATACGAAGAAAGGAGCATCTAACCCCACATCCGGTCCTCAAGATTCGATCACTCTGAGGCAGGAAATTACTGGGAAGATCAAACCCAAAGTCCCTAACAATGTCAAAGTTTATTTGAACCATTTAGAAAACTTAGCGACTTGGGCTAGTGGTCAACCGTCTATTCCTTCATTGGCTGCTTTCTTTGGGCAGCGCCTCGCAGCTGCAGCAGAGTCTTTGGCGGTCACTCCCGACGCTTCTCTATTTCTCTGCCAGAGGTGTGAAACAATTCTTCAACCTGGTTCTAACTGCTCAGTACGAATAGAGAAGAATAACGTCAAGAGATGTCGGAGACGCAACAAATCAAGTAATTTGACACAGAACGTTGTGGTGTATTATTGCCACTACTGCTCATGTAGGAACAGAAAGAGAGGTACTCCCAAAGGTCATATGAAAGGGCTTTATGACACGAAGTTTGTAAGCAAGGTGAAATCTGTGGATGTCAAGGATGGTAAACAATGTGAAAACGAGAGTCTTACCATGGATGTTCCTAAAATTCTTCCTTCTACAACCAGAGACAGTCTAACTATTGATACTCCTCCAACTGAGGACATTCCCACGGTAGATGCTCCTGCAACTCCTCCAACCATGACCGGAATGACTCTGTTGAATTTGAAGAGGAGAAAGCGGAAGAAACCATCATCTAAGAATCAAACTGAACCTGAAAGTTGTTTGGCTTCAACAGCAGATGGGGACAAAACTGAAGGCACATCCAAAAGGAAGCGTAATAGAAAATCATGGGCAAGTTTGAAGGAAATTGCTAAGAGGAATGAAGAGAGTGATCTTCGTCGGACGTCTCGCCTCAGTCACCGAACGACGCCCAGGCTCCTAGTTGATGCTAGACCGCCGGTTGTTTATGGATCTCGTGAGCGCAGAAGAAAGCCGTGTGCCCTAGCCGTCACCGACGCCGACGCTGCTGTGACCTGGGTTCACTCCTTCTCTGCCGGCCGACCAAGTCTACACCATTGGCCGAGGGATTCCCGGCCAGTTCCAGCGATTCTCTGGTGGTTCCTTATTCTATCGCTGAGTGGAAGTTTTTTGGGAATTATGGGACATGTGACTCAAATGTATTCTGATTTGGGTAACCAGTCACAAGTGTTCGAGGTGAATCTTAAGTTGGGTGATATACAACAAGGAGGTAACTCAGTTACACAATATTCTCACTCTATGAAGAGGATGTGGCAAGAACTTGATCTATTTGATACGTATGAGTGGAAGTCCACAGACGACCAAAAACATTATCGGAAAACTGTTGAAGATGATCGCATTTACAAATTCCTTGCTGGCCTCAATGTTGAGTTTGATAAGGGCATCTTTCATCAAGCTACATGTCGCGATACTCCTCAGCAAAATGGTGTTGCTGAATGGAAAAATCGACATTTGCTTGAAGTTGCTCGTGCCCTTATGTTTTCTATACATGTTCCAAAATATTTATGGGGGGATGTTGTTCTAACCGCTGCTTACCTAATCAATAGAATGCCTACTAAGAGGGAGTCATCTCTTATTGAAGAGAATTTTTGGGACACTTCACCTCTCCCAAACATCATTAGTCCTGAAATTATGAGCCCTAGTCCTTCGATCCCAAGTGTGGAAAATTCTCCGACAGGGGGAGAAACACTACAAACAGATCTGACAGTGAATGATCCTGAAAATCCGAATATGTCTCTTAGTCCTTCCTCTCATAATATGTTGCTTGATGTCTTTGATCTTGATATTTCAATTGCCCAGAGAAAAGTAGTGATGGAAGAGATGAACGCGCTGAAACAAAGTGGTACTTGGGGCATAGTTGATCTACCAGAAGACAAGATAGCAATGGGATTTAATTTTGATTGGTCACTTTATCAACTTGATGTTAAAAATGCATTTCTTAATGGGGAACTTGAAGAAGAAGTATTTATGGATTTACCACTTGGTTTTGAAGCTGACCTTGGGATTAACAAGGTATGTAAATTAAAAAAATCACTATACGGCCTTAAACAGTCTCCTAGAGCTTGGTTTGAACGTTTTGGAAAGGCAGTCACAAGCTATGGATTCAGCCAAAGTCAAGTCGATCACACTATGTTCTACAAGCATACGAGAAATGACAAGGTTGTTGTTCTGATAGTGTATGTCGATGATATCATTCTTACAGGCAATGATGAGACATGA

Protein sequence

MAKKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVPNNVKVYLNHLENLATWASGQPSIPSLAAFFGQRLAAAAESLAVTPDASLFLCQRCETILQPGSNCSVRIEKNNVKRCRRRNKSSNLTQNVVVYYCHYCSCRNRKRGTPKGHMKGLYDTKFVSKVKSVDVKDGKQCENESLTMDVPKILPSTTRDSLTIDTPPTEDIPTVDAPATPPTMTGMTLLNLKRRKRKKPSSKNQTEPESCLASTADGDKTEGTSKRKRNRKSWASLKEIAKRNEESDLRRTSRLSHRTTPRLLVDARPPVVYGSRERRRKPCALAVTDADAAVTWVHSFSAGRPSLHHWPRDSRPVPAILWWFLILSLSGSFLGIMGHVTQMYSDLGNQSQVFEVNLKLGDIQQGGNSVTQYSHSMKRMWQELDLFDTYEWKSTDDQKHYRKTVEDDRIYKFLAGLNVEFDKGIFHQATCRDTPQQNGVAEWKNRHLLEVARALMFSIHVPKYLWGDVVLTAAYLINRMPTKRESSLIEENFWDTSPLPNIISPEIMSPSPSIPSVENSPTGGETLQTDLTVNDPENPNMSLSPSSHNMLLDVFDLDISIAQRKVVMEEMNALKQSGTWGIVDLPEDKIAMGFNFDWSLYQLDVKNAFLNGELEEEVFMDLPLGFEADLGINKVCKLKKSLYGLKQSPRAWFERFGKAVTSYGFSQSQVDHTMFYKHTRNDKVVVLIVYVDDIILTGNDET
Homology
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BLAST of CmUC07G133760 vs. NCBI nr
Match: XP_038906436.1 (uncharacterized protein LOC120092350 isoform X1 [Benincasa hispida])

HSP 1 Score: 406.8 bits (1044), Expect = 4.1e-109
Identity = 232/348 (66.67%), Postives = 246/348 (70.69%), Query Frame = 0 

Query: 1   MAKKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVPNNVKVYLNHLENLATWASGQPS 60
           MAKKKGN KKG+SNPTSGPQDSITLRQEITGKIKPKV NNVKVYLNHLENLATWA GQPS
Sbjct: 1   MAKKKGNAKKGSSNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLENLATWACGQPS 60

Query: 61  IPSLAAFFGQRLAAAAESLAVTPDASLFLCQRCETILQPGSNCSVRIEKNNVKRCRRRNK 120
           IPSLA FFGQRLAAAAESLAV PDASLFLCQRCETILQPGSNCS+RIEKNN KR R+ NK
Sbjct: 61  IPSLATFFGQRLAAAAESLAVAPDASLFLCQRCETILQPGSNCSIRIEKNNAKRRRKHNK 120

Query: 121 SSNLTQNVVVYYCHYCSCRNRKRGTPKGHMKGLYDTKFVSKVKSVDVKDGKQCENE---- 180
            SNLTQNVV YYCHYCSCRN KRGTPKGHMK LY T+FVSK+KSV V+DGK+CEN+    
Sbjct: 121 CSNLTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTEFVSKLKSVGVEDGKECENKISPL 180

Query: 181 ----SLTMDVPKILPSTTRDSLTIDT---PPT---------------------------- 240
                LT+D P I PSTT +   IDT   PPT                            
Sbjct: 181 PTGNRLTIDTPAIPPSTTGEDQNIDTRAIPPTGDISVVDGPVFSSPRTKDILNINAPATP 240

Query: 241 -------------------------------EDIPTVDAPATPPTMTGMTLLNLKRRKRK 279
                                           DIPTVDAPATPPTMTG+TLL+ KRRKRK
Sbjct: 241 STLSVQTLSRSQKMKLLSNKQTGPASVEERVGDIPTVDAPATPPTMTGITLLDSKRRKRK 300

[Close]
BLAST of CmUC07G133760 vs. NCBI nr
Match: XP_008452026.1 (PREDICTED: uncharacterized protein LOC103493157 [Cucumis melo] >TYK16632.1 Rpr2 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 405.6 bits (1041), Expect = 9.1e-109
Identity = 223/342 (65.20%), Postives = 248/342 (72.51%), Query Frame = 0 

Query: 1   MAKKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVPNNVKVYLNHLENLATWASGQPS 60
           MA+KKGNTK+G+SNPTSGPQ+SITLRQE TGKIKPKV NN KVYLNHLENLATWASGQPS
Sbjct: 1   MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60

Query: 61  IPSLAAFFGQRLAAAAESLAVTPDASLFLCQRCETILQPGSNCSVRIEKNNVKRCRRRNK 120
           +PSLAAFFGQRLAAAAESLAV PD SLFLC RCET+LQPGSNC +RIEKNN K+ RR  K
Sbjct: 61  LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120

Query: 121 SSNLTQNVVVYYCHYCSCRNRKRGTPKGHMKGLYDTKFVSKVKSVDVKDGKQCENESLTM 180
           +SN+TQNVV YYCHYCSCRN KRGTPKGHMK LY T+ VSKVKSV VKDGK+CEN+ LT+
Sbjct: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV 180

Query: 181 DVPKILPSTTRDSLTIDT--------------------PPTE------------------ 240
           D P   P TT D LTIDT                    PPTE                  
Sbjct: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA 240

Query: 241 ----------------DIPTVDAPATPPTMTGMTLLNLKRRKRKKPSSKNQTEPESCLAS 289
                           DIPT+DAPATP T+T MTLL+ KRRKRKKPSSKN+TEPESC A 
Sbjct: 241 IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP 300

[Close]
BLAST of CmUC07G133760 vs. NCBI nr
Match: KAA0044832.1 (Rpr2 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 404.4 bits (1038), Expect = 2.0e-108
Identity = 223/342 (65.20%), Postives = 247/342 (72.22%), Query Frame = 0 

Query: 1   MAKKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVPNNVKVYLNHLENLATWASGQPS 60
           MA+KKGNTK+G+SNPTSGPQ+SITLRQE TGKIKPKV NN KVYLNHLENLATWASGQPS
Sbjct: 1   MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60

Query: 61  IPSLAAFFGQRLAAAAESLAVTPDASLFLCQRCETILQPGSNCSVRIEKNNVKRCRRRNK 120
           +PSLAAFFGQRLAAAAESLAV PD SLFLC RCET+LQPGSNC +RIEKNN K+  R  K
Sbjct: 61  LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRGRHKK 120

Query: 121 SSNLTQNVVVYYCHYCSCRNRKRGTPKGHMKGLYDTKFVSKVKSVDVKDGKQCENESLTM 180
           +SN+TQNVV YYCHYCSCRN KRGTPKGHMK LY T+ VSKVKSV VKDGK+CEN+ LTM
Sbjct: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTM 180

Query: 181 DVPKILPSTTRDSLTIDT--------------------PPTE------------------ 240
           D P   P TT D LTIDT                    PPTE                  
Sbjct: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA 240

Query: 241 ----------------DIPTVDAPATPPTMTGMTLLNLKRRKRKKPSSKNQTEPESCLAS 289
                           DIPT+DAPATP T+T MTLL+ KRRKRKKPSSKN+TEPESC A 
Sbjct: 241 IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP 300

[Close]
BLAST of CmUC07G133760 vs. NCBI nr
Match: XP_004146565.1 (uncharacterized protein LOC101220608 [Cucumis sativus] >KGN53340.1 hypothetical protein Csa_014704 [Cucumis sativus])

HSP 1 Score: 401.4 bits (1030), Expect = 1.7e-107
Identity = 222/342 (64.91%), Postives = 244/342 (71.35%), Query Frame = 0 

Query: 1   MAKKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVPNNVKVYLNHLENLATWASGQPS 60
           MA+KK NT +G+SNP  GPQ+SITLRQE TGKIKPKV NN KVYLNHLENLATWASGQPS
Sbjct: 1   MARKKSNTNRGSSNPGFGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60

Query: 61  IPSLAAFFGQRLAAAAESLAVTPDASLFLCQRCETILQPGSNCSVRIEKNNVKRCRRRNK 120
           +PSLAAFFGQRLAAAAESLAV+PD SLFLC RCETILQPGSNC++RIEKN  K+ RR  K
Sbjct: 61  LPSLAAFFGQRLAAAAESLAVSPDPSLFLCARCETILQPGSNCNIRIEKNTAKKRRRHKK 120

Query: 121 SSNLTQNVVVYYCHYCSCRNRKRGTPKGHMKGLYDTKFVSKVKSVDVKDGKQCENESLTM 180
            SNLTQNVV YYCHYCSCRN KRGTPKGHMK LY T+ VSKVKSV VKDGK+CEN+  TM
Sbjct: 121 GSNLTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKIFTM 180

Query: 181 DVPKILPSTTRDSLTIDTP--------------------PT------------------- 240
           D PKI P TT D LTIDTP                    PT                   
Sbjct: 181 DTPKIPPLTTVDCLTIDTPAIPSLSTTRDDLTIDTSAISPTGDISVVDGPAISSPRTTPA 240

Query: 241 ---------------EDIPTVDAPATPPTMTGMTLLNLKRRKRKKPSSKNQTEPESCLAS 289
                           DIPT+DAPATP T+TGMTLL+ KRRKRKKPSSKNQTEPESC   
Sbjct: 241 ISSTLSVTSISRSQVRDIPTLDAPATPLTLTGMTLLDSKRRKRKKPSSKNQTEPESCSGP 300

[Close]
BLAST of CmUC07G133760 vs. NCBI nr
Match: XP_022984531.1 (uncharacterized protein LOC111482797 [Cucurbita maxima])

HSP 1 Score: 381.3 bits (978), Expect = 1.8e-101
Identity = 214/342 (62.57%), Postives = 236/342 (69.01%), Query Frame = 0 

Query: 1   MAKKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVPNNVKVYLNHLENLATWASGQPS 60
           MAK+KGNTKKGASNPTSGPQDSIT+RQEITGK KPKV NNVK YLNHLENLATWASG+ S
Sbjct: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60

Query: 61  IPSLAAFFGQRLAAAAESLAVTPDASLFLCQRCETILQPGSNCSVRIEKNNVKRCRRRNK 120
           IPSLAAFFGQRLA AAESLAV PDASLF CQRCETILQPGSNCS+RIEKNN KR RR+ K
Sbjct: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK 120

Query: 121 SSNLTQNVVVYYCHYCSCRNRKRGTPKGHMKGLYDTKFVSKVKSVDVKDGKQCE------ 180
            SN  QN V YYCH+CSCRN KRGTPKGHMK LYD  F  +VK VDVKDGK+CE      
Sbjct: 121 CSNSRQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 180

Query: 181 -NESLTMDVPKI-----LPST--------------TRDSLTIDTPPTED----------- 240
             E LT+D PKI     +P T              T+  L I++P T             
Sbjct: 181 PTEILTIDAPKIPDASAIPPTGDITALDNPAIQLQTKGILNINSPATPSTLSVTTLLKSQ 240

Query: 241 --------------------------IPTVDAPATPPTMTGMTLLNLKRRKRKKPSSKNQ 280
                                     +PTVDAPATP T TG+TLL+ K+RKR KPSSKNQ
Sbjct: 241 KREMTTLSEKHIGHDIRTDEEKKTGAVPTVDAPATPSTSTGVTLLDSKKRKRNKPSSKNQ 300

[Close]
BLAST of CmUC07G133760 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 2.8e-20
Identity = 45/112 (40.18%), Postives = 75/112 (66.96%), Query Frame = 0 

Query: 622  IAMGFNFDWSLYQLDVKNAFLNGELEEEVFMDLPLGFEADLGINKVCKLKKSLYGLKQSP 681
            +++  + D  + QLDVK AFL+G+LEEE++M+ P GFE     + VCKL KSLYGLKQ+P
Sbjct: 908  LSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAP 967

Query: 682  RAWFERFGKAVTSYGFSQSQVDHTMFYKHTRNDKVVVLIVYVDDIILTGNDE 734
            R W+ +F   + S  + ++  D  +++K    +  ++L++YVDD+++ G D+
Sbjct: 968  RQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDK 1019


HSP 2 Score: 67.0 bits (162), Expect = 1.0e-09
Identity = 32/71 (45.07%), Postives = 42/71 (59.15%), Query Frame = 0 

Query: 456 GIFHQATCRDTPQQNGVAEWKNRHLLEVARALMFSIHVPKYLWGDVVLTAAYLINRMPTK 515
           GI H+ T   TPQ NGVAE  NR ++E  R+++    +PK  WG+ V TA YLINR P+ 
Sbjct: 568 GIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSV 627

Query: 516 RESSLIEENFW 527
             +  I E  W
Sbjct: 628 PLAFEIPERVW 638

[Close]
BLAST of CmUC07G133760 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 4.8e-20
Identity = 53/116 (45.69%), Postives = 72/116 (62.07%), Query Frame = 0 

Query: 621  KIAMGFNFD--WSLYQLDVKNAFLNGELEEEVFMDLPLGFEADLGINKVCKLKKSLYGLK 680
            +I +G   D  W + QLDV NAFL G L ++V+M  P GF      N VCKL+K+LYGLK
Sbjct: 1048 RIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLK 1107

Query: 681  QSPRAWFERFGKAVTSYGFSQSQVDHTMFYKHTRNDKVVVLIVYVDDIILTGNDET 735
            Q+PRAW+      + + GF  S  D ++F    R   +V ++VYVDDI++TGND T
Sbjct: 1108 QAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQ-RGKSIVYMLVYVDDILITGNDPT 1162


HSP 2 Score: 54.7 bits (130), Expect = 5.2e-06
Identity = 24/59 (40.68%), Postives = 34/59 (57.63%), Query Frame = 0 

Query: 456 GIFHQATCRDTPQQNGVAEWKNRHLLEVARALMFSIHVPKYLWGDVVLTAAYLINRMPT 515
           GI H  +   TP+ NG++E K+RH++E    L+    +PK  W      A YLINR+PT
Sbjct: 608 GISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPT 666

[Close]
BLAST of CmUC07G133760 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.6e-18
Identity = 49/114 (42.98%), Postives = 71/114 (62.28%), Query Frame = 0 

Query: 621  KIAMGFNFD--WSLYQLDVKNAFLNGELEEEVFMDLPLGFEADLGINKVCKLKKSLYGLK 680
            +I +G   D  W + QLDV NAFL G L +EV+M  P GF      + VC+L+K++YGLK
Sbjct: 1031 RIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLK 1090

Query: 681  QSPRAWFERFGKAVTSYGFSQSQVDHTMFYKHTRNDKVVVLIVYVDDIILTGND 733
            Q+PRAW+      + + GF  S  D ++F    R   ++ ++VYVDDI++TGND
Sbjct: 1091 QAPRAWYVELRTYLLTVGFVNSISDTSLFVLQ-RGRSIIYMLVYVDDILITGND 1143


HSP 2 Score: 54.7 bits (130), Expect = 5.2e-06
Identity = 25/59 (42.37%), Postives = 35/59 (59.32%), Query Frame = 0 

Query: 456 GIFHQATCRDTPQQNGVAEWKNRHLLEVARALMFSIHVPKYLWGDVVLTAAYLINRMPT 515
           GI H  +   TP+ NG++E K+RH++E+   L+    VPK  W      A YLINR+PT
Sbjct: 587 GISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPT 645

[Close]
BLAST of CmUC07G133760 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 89.7 bits (221), Expect = 1.5e-16
Identity = 46/115 (40.00%), Postives = 72/115 (62.61%), Query Frame = 0 

Query: 622  IAMGFNFDWSLYQLDVKNAFLNGELEEEVFMDLPLGFEADLGINKVCKLKKSLYGLKQSP 681
            +++   ++  ++Q+DVK AFLNG L+EE++M LP G   +   + VCKL K++YGLKQ+ 
Sbjct: 988  LSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGISCN--SDNVCKLNKAIYGLKQAA 1047

Query: 682  RAWFERFGKAVTSYGFSQSQVDHTMFY--KHTRNDKVVVLIVYVDDIILTGNDET 735
            R WFE F +A+    F  S VD  ++   K   N+ + VL+ YVDD+++   D T
Sbjct: 1048 RCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLL-YVDDVVIATGDMT 1099


HSP 2 Score: 60.1 bits (144), Expect = 1.2e-07
Identity = 31/74 (41.89%), Postives = 42/74 (56.76%), Query Frame = 0 

Query: 455 KGIFHQATCRDTPQQNGVAEWKNRHLLEVARALMFSIHVPKYLWGDVVLTAAYLINRMPT 514
           KGI +  T   TPQ NGV+E   R + E AR ++    + K  WG+ VLTA YLINR+P+
Sbjct: 567 KGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPS 626

Query: 515 KR--ESSLIEENFW 527
           +   +SS      W
Sbjct: 627 RALVDSSKTPYEMW 640

[Close]
BLAST of CmUC07G133760 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 3.8e-09
Identity = 30/94 (31.91%), Postives = 55/94 (58.51%), Query Frame = 0 

Query: 635 LDVKNAFLNGELEEEVFMDLPLGFEADLGINKVCKLKKSLYGLKQSPRAWFERFGKAVTS 694
           +DV  AFLN  ++E +++  P GF  +   + V +L   +YGLKQ+P  W E     +  
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 695 YGFSQSQVDHTMFYKHTRNDKVVVLIVYVDDIIL 729
            GF + + +H ++++ T +D  + + VYVDD+++
Sbjct: 61  IGFCRHEGEHGLYFRST-SDGPIYIAVYVDDLLV 93

[Close]
BLAST of CmUC07G133760 vs. ExPASy TrEMBL
Match: A0A5D3CYJ3 (Rpr2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004600 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 4.4e-109
Identity = 223/342 (65.20%), Postives = 248/342 (72.51%), Query Frame = 0 

Query: 1   MAKKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVPNNVKVYLNHLENLATWASGQPS 60
           MA+KKGNTK+G+SNPTSGPQ+SITLRQE TGKIKPKV NN KVYLNHLENLATWASGQPS
Sbjct: 1   MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60

Query: 61  IPSLAAFFGQRLAAAAESLAVTPDASLFLCQRCETILQPGSNCSVRIEKNNVKRCRRRNK 120
           +PSLAAFFGQRLAAAAESLAV PD SLFLC RCET+LQPGSNC +RIEKNN K+ RR  K
Sbjct: 61  LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120

Query: 121 SSNLTQNVVVYYCHYCSCRNRKRGTPKGHMKGLYDTKFVSKVKSVDVKDGKQCENESLTM 180
           +SN+TQNVV YYCHYCSCRN KRGTPKGHMK LY T+ VSKVKSV VKDGK+CEN+ LT+
Sbjct: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV 180

Query: 181 DVPKILPSTTRDSLTIDT--------------------PPTE------------------ 240
           D P   P TT D LTIDT                    PPTE                  
Sbjct: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA 240

Query: 241 ----------------DIPTVDAPATPPTMTGMTLLNLKRRKRKKPSSKNQTEPESCLAS 289
                           DIPT+DAPATP T+T MTLL+ KRRKRKKPSSKN+TEPESC A 
Sbjct: 241 IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP 300

[Close]
BLAST of CmUC07G133760 vs. ExPASy TrEMBL
Match: A0A1S3BU13 (uncharacterized protein LOC103493157 OS=Cucumis melo OX=3656 GN=LOC103493157 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 4.4e-109
Identity = 223/342 (65.20%), Postives = 248/342 (72.51%), Query Frame = 0 

Query: 1   MAKKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVPNNVKVYLNHLENLATWASGQPS 60
           MA+KKGNTK+G+SNPTSGPQ+SITLRQE TGKIKPKV NN KVYLNHLENLATWASGQPS
Sbjct: 1   MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60

Query: 61  IPSLAAFFGQRLAAAAESLAVTPDASLFLCQRCETILQPGSNCSVRIEKNNVKRCRRRNK 120
           +PSLAAFFGQRLAAAAESLAV PD SLFLC RCET+LQPGSNC +RIEKNN K+ RR  K
Sbjct: 61  LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120

Query: 121 SSNLTQNVVVYYCHYCSCRNRKRGTPKGHMKGLYDTKFVSKVKSVDVKDGKQCENESLTM 180
           +SN+TQNVV YYCHYCSCRN KRGTPKGHMK LY T+ VSKVKSV VKDGK+CEN+ LT+
Sbjct: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV 180

Query: 181 DVPKILPSTTRDSLTIDT--------------------PPTE------------------ 240
           D P   P TT D LTIDT                    PPTE                  
Sbjct: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA 240

Query: 241 ----------------DIPTVDAPATPPTMTGMTLLNLKRRKRKKPSSKNQTEPESCLAS 289
                           DIPT+DAPATP T+T MTLL+ KRRKRKKPSSKN+TEPESC A 
Sbjct: 241 IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP 300

[Close]
BLAST of CmUC07G133760 vs. ExPASy TrEMBL
Match: A0A5A7TNC0 (Rpr2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001240 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 9.8e-109
Identity = 223/342 (65.20%), Postives = 247/342 (72.22%), Query Frame = 0 

Query: 1   MAKKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVPNNVKVYLNHLENLATWASGQPS 60
           MA+KKGNTK+G+SNPTSGPQ+SITLRQE TGKIKPKV NN KVYLNHLENLATWASGQPS
Sbjct: 1   MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60

Query: 61  IPSLAAFFGQRLAAAAESLAVTPDASLFLCQRCETILQPGSNCSVRIEKNNVKRCRRRNK 120
           +PSLAAFFGQRLAAAAESLAV PD SLFLC RCET+LQPGSNC +RIEKNN K+  R  K
Sbjct: 61  LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRGRHKK 120

Query: 121 SSNLTQNVVVYYCHYCSCRNRKRGTPKGHMKGLYDTKFVSKVKSVDVKDGKQCENESLTM 180
           +SN+TQNVV YYCHYCSCRN KRGTPKGHMK LY T+ VSKVKSV VKDGK+CEN+ LTM
Sbjct: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTM 180

Query: 181 DVPKILPSTTRDSLTIDT--------------------PPTE------------------ 240
           D P   P TT D LTIDT                    PPTE                  
Sbjct: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPPTEDISVDDGPAISSPRTTPA 240

Query: 241 ----------------DIPTVDAPATPPTMTGMTLLNLKRRKRKKPSSKNQTEPESCLAS 289
                           DIPT+DAPATP T+T MTLL+ KRRKRKKPSSKN+TEPESC A 
Sbjct: 241 IPSTSSVTSMSRSQVRDIPTLDAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAP 300

[Close]
BLAST of CmUC07G133760 vs. ExPASy TrEMBL
Match: A0A0A0KUP1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G048010 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 8.3e-108
Identity = 222/342 (64.91%), Postives = 244/342 (71.35%), Query Frame = 0 

Query: 1   MAKKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVPNNVKVYLNHLENLATWASGQPS 60
           MA+KK NT +G+SNP  GPQ+SITLRQE TGKIKPKV NN KVYLNHLENLATWASGQPS
Sbjct: 1   MARKKSNTNRGSSNPGFGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60

Query: 61  IPSLAAFFGQRLAAAAESLAVTPDASLFLCQRCETILQPGSNCSVRIEKNNVKRCRRRNK 120
           +PSLAAFFGQRLAAAAESLAV+PD SLFLC RCETILQPGSNC++RIEKN  K+ RR  K
Sbjct: 61  LPSLAAFFGQRLAAAAESLAVSPDPSLFLCARCETILQPGSNCNIRIEKNTAKKRRRHKK 120

Query: 121 SSNLTQNVVVYYCHYCSCRNRKRGTPKGHMKGLYDTKFVSKVKSVDVKDGKQCENESLTM 180
            SNLTQNVV YYCHYCSCRN KRGTPKGHMK LY T+ VSKVKSV VKDGK+CEN+  TM
Sbjct: 121 GSNLTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKIFTM 180

Query: 181 DVPKILPSTTRDSLTIDTP--------------------PT------------------- 240
           D PKI P TT D LTIDTP                    PT                   
Sbjct: 181 DTPKIPPLTTVDCLTIDTPAIPSLSTTRDDLTIDTSAISPTGDISVVDGPAISSPRTTPA 240

Query: 241 ---------------EDIPTVDAPATPPTMTGMTLLNLKRRKRKKPSSKNQTEPESCLAS 289
                           DIPT+DAPATP T+TGMTLL+ KRRKRKKPSSKNQTEPESC   
Sbjct: 241 ISSTLSVTSISRSQVRDIPTLDAPATPLTLTGMTLLDSKRRKRKKPSSKNQTEPESCSGP 300

[Close]
BLAST of CmUC07G133760 vs. ExPASy TrEMBL
Match: A0A6J1J5I6 (uncharacterized protein LOC111482797 OS=Cucurbita maxima OX=3661 GN=LOC111482797 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 8.9e-102
Identity = 214/342 (62.57%), Postives = 236/342 (69.01%), Query Frame = 0 

Query: 1   MAKKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVPNNVKVYLNHLENLATWASGQPS 60
           MAK+KGNTKKGASNPTSGPQDSIT+RQEITGK KPKV NNVK YLNHLENLATWASG+ S
Sbjct: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60

Query: 61  IPSLAAFFGQRLAAAAESLAVTPDASLFLCQRCETILQPGSNCSVRIEKNNVKRCRRRNK 120
           IPSLAAFFGQRLA AAESLAV PDASLF CQRCETILQPGSNCS+RIEKNN KR RR+ K
Sbjct: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK 120

Query: 121 SSNLTQNVVVYYCHYCSCRNRKRGTPKGHMKGLYDTKFVSKVKSVDVKDGKQCE------ 180
            SN  QN V YYCH+CSCRN KRGTPKGHMK LYD  F  +VK VDVKDGK+CE      
Sbjct: 121 CSNSRQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 180

Query: 181 -NESLTMDVPKI-----LPST--------------TRDSLTIDTPPTED----------- 240
             E LT+D PKI     +P T              T+  L I++P T             
Sbjct: 181 PTEILTIDAPKIPDASAIPPTGDITALDNPAIQLQTKGILNINSPATPSTLSVTTLLKSQ 240

Query: 241 --------------------------IPTVDAPATPPTMTGMTLLNLKRRKRKKPSSKNQ 280
                                     +PTVDAPATP T TG+TLL+ K+RKR KPSSKNQ
Sbjct: 241 KREMTTLSEKHIGHDIRTDEEKKTGAVPTVDAPATPSTSTGVTLLDSKKRKRNKPSSKNQ 300

[Close]
BLAST of CmUC07G133760 vs. TAIR 10
Match: AT5G41270.1 (CONTAINS InterPro DOMAIN/s: RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 136.3 bits (342), Expect = 9.6e-32
Identity = 100/239 (41.84%), Postives = 133/239 (55.65%), Query Frame = 0 

Query: 47  HLENLATWAS-GQPSIPSLAAFFGQRLAAAAESLAVTPDASLFLCQRCETILQPGSNCSV 106
           HL+NLA W+S G   IPSLA+  G+RLAA  ES  +T D  L  CQRCETIL+PG NC+V
Sbjct: 28  HLKNLALWSSTGDTPIPSLASLLGRRLAADTESTGITTDPDLVSCQRCETILKPGFNCNV 87

Query: 107 RIEK--NNVKRCRRRNKSSN---LTQNVVVYYCHYCSCRNRKRGTPKGHMKGLYDTKFVS 166
           RIEK   NVK+ R R K SN     QN VVY+C++CS RN KRGT KG MK LY  K   
Sbjct: 88  RIEKVSANVKKKRNRCKKSNNICFPQNNVVYHCNFCSHRNLKRGTAKGQMKELYPFK-PK 147

Query: 167 KVKSVDVKDGKQCENESLTMDVPKILPSTTRDSLTIDTPPTEDIPTVDAPATPPTMTGMT 226
             +S   K  K+       M +P+ + S       + +P       V+  +   T   M 
Sbjct: 148 TARSSRPKIKKE-------MTMPQEIQSN-----MLSSPERSVKDQVEEKSVGDTPKPMM 207

Query: 227 LLNLKRRKRKKPSSKNQTEPESCLASTADGDKTEGTSKRKRNRKSWASLKEIAKRNEES 280
           L   + R+ +KP SK  +EP+S        +KT G S +++ +  W S+KEIA+ N+ S
Sbjct: 208 LTLERDRRIRKPKSKKPSEPQSV------PEKTVGGSNKRKRKSPWTSMKEIAETNKSS 247

[Close]
BLAST of CmUC07G133760 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 107.8 bits (268), Expect = 3.7e-23
Identity = 56/116 (48.28%), Postives = 78/116 (67.24%), Query Frame = 0 

Query: 622 IAMGFNFDWSLYQLDVKNAFLNGELEEEVFMDLPLGFEA----DLGINKVCKLKKSLYGL 681
           +A+   ++++L+QLD+ NAFLNG+L+EE++M LP G+ A     L  N VC LKKS+YGL
Sbjct: 180 LAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGL 239

Query: 682 KQSPRAWFERFGKAVTSYGFSQSQVDHTMFYKHTRNDKVVVLIVYVDDIILTGNDE 734
           KQ+ R WF +F   +  +GF QS  DHT F K T    + VL VYVDDII+  N++
Sbjct: 240 KQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVL-VYVDDIIICSNND 294

The following BLAST results are available for this feature:
BLAST of CmUC07G133760 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038906436.14.1e-10966.67uncharacterized protein LOC120092350 isoform X1 [Benincasa hispida][more]
XP_008452026.19.1e-10965.20PREDICTED: uncharacterized protein LOC103493157 [Cucumis melo] >TYK16632.1 Rpr2 ... [more]
KAA0044832.12.0e-10865.20Rpr2 domain-containing protein [Cucumis melo var. makuwa][more]
XP_004146565.11.7e-10764.91uncharacterized protein LOC101220608 [Cucumis sativus] >KGN53340.1 hypothetical ... [more]
XP_022984531.11.8e-10162.57uncharacterized protein LOC111482797 [Cucurbita maxima][more]
BLAST of CmUC07G133760 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P109782.8e-2040.18Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
Q94HW24.8e-2045.69Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT942.6e-1842.98Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P041461.5e-1640.00Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P256003.8e-0931.91Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
BLAST of CmUC07G133760 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CYJ34.4e-10965.20Rpr2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S3BU134.4e-10965.20uncharacterized protein LOC103493157 OS=Cucumis melo OX=3656 GN=LOC103493157 PE=... [more]
A0A5A7TNC09.8e-10965.20Rpr2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A0A0KUP18.3e-10864.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G048010 PE=4 SV=1[more]
A0A6J1J5I68.9e-10262.57uncharacterized protein LOC111482797 OS=Cucurbita maxima OX=3661 GN=LOC111482797... [more]
BLAST of CmUC07G133760 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G41270.19.6e-3241.84CONTAINS InterPro DOMAIN/s: RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175); Ha... [more]
AT4G23160.13.7e-2348.28cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007175Ribonuclease P subunit, Rpr2/Snm1/Rpp21PFAMPF04032Rpr2coord: 45..136
e-value: 3.2E-11
score: 43.4
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 623..733
e-value: 6.5E-30
score: 104.5
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 427..520
e-value: 3.7E-10
score: 41.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..23
NoneNo IPR availablePANTHERPTHR36072OS01G0541600 PROTEINcoord: 201..285
coord: 1..171
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 454..515
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 626..732

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC07G133760.1CmUC07G133760.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006396 RNA processing
cellular_component GO:0032991 protein-containing complex
molecular_function GO:0003676 nucleic acid binding