CmUC07G131260 (gene) Watermelon (USVL531) v1

Overview
NameCmUC07G131260
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr07: 5643134 .. 5643535 (-)
RNA-Seq ExpressionCmUC07G131260
SyntenyCmUC07G131260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAAGAATTTGACAGCAGTGTGCAAAGTAATGAAAATGAAGGAGAAATTGCGGGAGTGAGTCCAATTTTGAGAGTACGTGAGGACATAATTATCTCCTCAAAGCTACTCTCTTTGAGCCTATACACAAGAAAGTTTGTTATCACCTAGGAGGATTTAATTTTAGAGTACTATCTAGTAGTACTTATCCTGATTTTTTTTCAGGATTTTAAAGCACTAATGAAGGAGCAATGTTGCCCACATGTGAGGTACAAAACAAAGACATTACTTAGAAAATATTGCTCCAAACTTGTTTACGACCTCATCAATAGTCGAAAGTTCAAGAATGATCAAAAGAGAGCTAGAACATTAACATCTCATGACTACAGATTTGCTCTACAAGGTGACAATTTACATTAA

mRNA sequence

ATGAAAGAAGAATTTGACAGCAGTGTGCAAAGTAATGAAAATGAAGGAGAAATTGCGGGAGTGAGTCCAATTTTGAGAGATTTTAAAGCACTAATGAAGGAGCAATGTTGCCCACATGTGAGGTACAAAACAAAGACATTACTTAGAAAATATTGCTCCAAACTTGTTTACGACCTCATCAATAGTCGAAAGTTCAAGAATGATCAAAAGAGAGCTAGAACATTAACATCTCATGACTACAGATTTGCTCTACAAGGTGACAATTTACATTAA

Coding sequence (CDS)

ATGAAAGAAGAATTTGACAGCAGTGTGCAAAGTAATGAAAATGAAGGAGAAATTGCGGGAGTGAGTCCAATTTTGAGAGATTTTAAAGCACTAATGAAGGAGCAATGTTGCCCACATGTGAGGTACAAAACAAAGACATTACTTAGAAAATATTGCTCCAAACTTGTTTACGACCTCATCAATAGTCGAAAGTTCAAGAATGATCAAAAGAGAGCTAGAACATTAACATCTCATGACTACAGATTTGCTCTACAAGGTGACAATTTACATTAA

Protein sequence

MKEEFDSSVQSNENEGEIAGVSPILRDFKALMKEQCCPHVRYKTKTLLRKYCSKLVYDLINSRKFKNDQKRARTLTSHDYRFALQGDNLH
Homology
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BLAST of CmUC07G131260 vs. NCBI nr
Match: KGN64815.1 (hypothetical protein Csa_014179 [Cucumis sativus])

HSP 1 Score: 57.4 bits (137), Expect = 7.5e-05
Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 0 

Query: 1  MKEEFDSSVQSNENEGEIAGVSPILRDFKALMKEQCCPHV 41
          +K+ FDSSVQ NENEGEI GVSPILR   AL+KEQC  HV
Sbjct: 34 VKKGFDSSVQCNENEGEIEGVSPILRVRLALVKEQCYSHV 73

[Close]
BLAST of CmUC07G131260 vs. ExPASy TrEMBL
Match: A0A0A0LSC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G110870 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.6e-05
Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 0 

Query: 1  MKEEFDSSVQSNENEGEIAGVSPILRDFKALMKEQCCPHV 41
          +K+ FDSSVQ NENEGEI GVSPILR   AL+KEQC  HV
Sbjct: 34 VKKGFDSSVQCNENEGEIEGVSPILRVRLALVKEQCYSHV 73

The following BLAST results are available for this feature:
BLAST of CmUC07G131260 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64815.17.5e-0572.50hypothetical protein Csa_014179 [Cucumis sativus][more]
BLAST of CmUC07G131260 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC07G131260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSC13.6e-0572.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G110870 PE=4 SV=1[more]
BLAST of CmUC07G131260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC07G131260.1CmUC07G131260.1mRNA