CmUC07G130340 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAATCCTCAGTTGGAATGCCGGGGGTATTGGTAACCCTAAGGCATTCCGGGCATTGTCTGACCTTCTAAGGATCAGGCATCCTGTGATTGTGTTTCTATCTGAGACAAAGTGTGGTGAAGAGACTACGGATAGAATCAAGAGAAGTGGGAATTTCCTTGGATGCTTTGCGGTTAAAAGCATTGGTTCAAAAGGTGGCCTGTGTCTACTTTGGAAAGCTAAGGTCGATTTGAGAGTAATCAAATCAATGGAGATTTTCTGGCATATATGGTTTCCCGCAAGGTGA ATGAAAATCCTCAGTTGGAATGCCGGGGGTATTGGTAACCCTAAGGCATTCCGGGCATTGTCTGACCTTCTAAGGATCAGGCATCCTGTGATTGTGTTTCTATCTGAGACAAAGTGTGGTGAAGAGACTACGGATAGAATCAAGAGAAGTGGGAATTTCCTTGGATGCTTTGCGGTTAAAAGCATTGGTTCAAAAGGTGGCCTGTGTCTACTTTGGAAAGCTAAGGTCGATTTGAGAGTAATCAAATCAATGGAGATTTTCTGGCATATATGGTTTCCCGCAAGGTGA ATGAAAATCCTCAGTTGGAATGCCGGGGGTATTGGTAACCCTAAGGCATTCCGGGCATTGTCTGACCTTCTAAGGATCAGGCATCCTGTGATTGTGTTTCTATCTGAGACAAAGTGTGGTGAAGAGACTACGGATAGAATCAAGAGAAGTGGGAATTTCCTTGGATGCTTTGCGGTTAAAAGCATTGGTTCAAAAGGTGGCCTGTGTCTACTTTGGAAAGCTAAGGTCGATTTGAGAGTAATCAAATCAATGGAGATTTTCTGGCATATATGGTTTCCCGCAAGGTGA MKILSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVIKSMEIFWHIWFPAR Homology
BLAST of CmUC07G130340 vs. NCBI nr
Match: XP_042962545.1 (uncharacterized protein LOC122296814 [Carya illinoinensis]) HSP 1 Score: 89.0 bits (219), Expect = 2.4e-14 Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 0
BLAST of CmUC07G130340 vs. NCBI nr
Match: XP_042958050.1 (uncharacterized protein LOC122293561 [Carya illinoinensis]) HSP 1 Score: 88.2 bits (217), Expect = 4.2e-14 Identity = 37/90 (41.11%), Postives = 60/90 (66.67%), Query Frame = 0
BLAST of CmUC07G130340 vs. NCBI nr
Match: XP_042964610.1 (uncharacterized protein LOC122298825 [Carya illinoinensis]) HSP 1 Score: 87.0 bits (214), Expect = 9.3e-14 Identity = 37/90 (41.11%), Postives = 57/90 (63.33%), Query Frame = 0
BLAST of CmUC07G130340 vs. NCBI nr
Match: XP_042950087.1 (uncharacterized protein LOC122282202 [Carya illinoinensis]) HSP 1 Score: 86.3 bits (212), Expect = 1.6e-13 Identity = 41/89 (46.07%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of CmUC07G130340 vs. NCBI nr
Match: XP_042961719.1 (uncharacterized protein LOC122296220 [Carya illinoinensis]) HSP 1 Score: 86.3 bits (212), Expect = 1.6e-13 Identity = 36/90 (40.00%), Postives = 59/90 (65.56%), Query Frame = 0
BLAST of CmUC07G130340 vs. ExPASy TrEMBL
Match: A0A2N9HPX7 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41606 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 6.5e-13 Identity = 33/82 (40.24%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of CmUC07G130340 vs. ExPASy TrEMBL
Match: A0A2N9EC78 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS153 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 6.5e-13 Identity = 33/82 (40.24%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of CmUC07G130340 vs. ExPASy TrEMBL
Match: A0A2N9I9J4 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48601 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 6.5e-13 Identity = 33/82 (40.24%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of CmUC07G130340 vs. ExPASy TrEMBL
Match: A0A5B6VDB0 (BEACH domain-containing lvsC OS=Gossypium australe OX=47621 GN=EPI10_002129 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.4e-12 Identity = 34/88 (38.64%), Postives = 59/88 (67.05%), Query Frame = 0
BLAST of CmUC07G130340 vs. ExPASy TrEMBL
Match: A0A5C7HLY4 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_015628 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.9e-12 Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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