CmUC07G128380 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC07G128380
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Transcription initiation factor IIF subunit alpha
Location	CmU531Chr07: 1804226 .. 1809025 (-)
RNA-Seq Expression	CmUC07G128380
Synteny	CmUC07G128380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTTCGATTTGCTGCTGAAGCCATCGTGCAGTGGATGCGGATCCTCGACGGAGTTGTATGGGAGCAATTGCAAGCACATGACATTGTGCTTGACCTGTGGAAAAACTATGGCTGAGAACAAGGGGAAATGTTATGATTGTGGGGCTACTGTAACTCGCTTAATAAGAGTTCGTCCTTTACCTCGTCTATCTCAAAAAGCATGATGATGATTTGAATGTGTTAAATTTGTACTCATGTGATTAGGGCTTCTTATTTATGACAGATTTAAGAATTTTCATAATAGCGTGGATTGAGTACTGTCTGCCTTCTCTTTCTGAGAGTGCATGATGAACTATATTTTAGGAATACAATGTTCGAGCAAGTGGGAGTAGCGACAAGAACTACTTCATCGGTAGGTTCATGAGTGGGCTGCCTAACTTTTCGAAGAAGAGAAATGCTGAGAATAAATGGTCTCTTTACAAGGATGGTCTACAAGGACGCCAACTTACGGATGCCCTTCGGGTACTTAGTTGACTTCAATTTTTGCTTCCTTTCTTATGTTTGTCTTGGATAGTTTATTGTTTTGGAAGCCTAGCCATTGGTGACTTGATATCTATTTTTTTTTCTAGAAGTTATAACTGTTTAGAGTAACAAGGGCATAAGTAATTGATGCTATCCTTCAGCAAAATGAAAACGGAACACACATTCTTTAATGTAGATAAATGGTCCGGTCCCTTATGAACTTGGAATCTTGTACACTTATTTTTTTGTCACTTCTTGGGCTTTCTGGCACAGAAGAGTACACAAACTTATACTCTTTGTATTAGTTTGAACTTTTCTATTTTCTTATGACGACTTATGTATATGTTGGACTATGTAATTATATGTTTTGTGTTCAATCTTTAATTATCACTTTGTGTTAACCATAACTCAGCTTTGACCTTGGAGATGCATGTTAATATCTTGTTGCATTTATTTTTTCTTGTTTCTCTCTTCAAGTAAGTTGTTTTGTGGCTTATTGCTTACCTTTTTTTTCTTTATTTTGTTTAAAAATGATTATTTGCACTCTTGTTCTGCTTGGCCCTGATTAATTATGATTCTGCTAACGTAGGAAAAGTACAAGAATAGACCCTGGCTCTTGGAAGATGAAACGGGCCAATTTCAATTCCAAGGTCATCTGGAGGGCTCACAATCAGCAACATACTACTTGCTTGTATTACAAGGGAAGGAATTTACTGCCATTCCTGCAGGTTCTTGGTATGGTTTATCTTTAAGTTAGTTTTCCATGAATCAAGTTATATCCTTTATTAGTTTGGCATAATCTTCTTCATACATGGTTATTACATGGTTCCTATTATTGAAATCTTCTATATTGTCCGGATGAAAAGTTTAAAGTCATGCATGGTGGTAGCAGAATGACTGACCTCAATTTTCAGGTACAACTTCAACAAAGTGGCACAGTATAAGCAACTTACGTTGGAGGAGGCAGAAGAGAAAATGAAGAATCGAAAGAAGACAGCAGATGGATATGAAAGATGGATGATGAAAGCTGCAAGTAATGGTCCTGCTGCATTTGGTGAAGTTGAGAAGTTTGATGATAAAGAAAGTGTTGGTACTAGTGGTAGGGGACGAAGAAAAGCTGCTGGTGATGAGAATGAAGGCAATGCCTCAGATAGGGGAGAAGAAGATGAAGAAGAAGAGGCACAAAGGAAGAACAGATTGGGACTCAATAAAAAGGGTGGCGGCGATGATGATGATGAGGAAGGTGCTAGGGGTGGTGACCATGACTTGGATGATGATGATATTGAGAAAGGTTATCTTTTCCCTTTAAAGAAAAAGAAACATTTTTTTAGGTCAAGTGCTTTACCACGTCATTGTCATCTCTATAGTACATCACTTGCCATTTGTTGATTGTTTACGGGCTAGGCCATCACCATCATATGGGAACCAAATGGATCAAATGAGTGGTTTATATTTGGGGTAGCATTAGATTAGCATATGCTAACCATCATGTGTTGGCTTAGTGGTAATTAGTGGTAAATAAAGGGCTTGGCTTTGAAAAAGGGCTAAAGAGAGAATGAGTTCACACTGGATGGCCACTTAGGTTTTAATATCCTACAAGTTTTCTTGACACCCAAATATAGTAGGCAGACAGGTTTTTCCGTGAGATTAGTCGCGGTGTATGTAAGCCGGCCTAGACACTCACAGATATCAAAAAAGAAAGAAAAAAAAAAGCCAATGCTTTTGTTCTCTAGGAAGTTTCAAAATTTCACCATGTTTTTATAATAATGTGTTTGACAAGGAAACTCTTTCTTGTACCCATGCATGTGAAATTTGGCTATTAATTCTTATGACGAGCATTGAAGCATTGTTCCTTTATGTTAACCTGTATGTCCAACTTTATAGGAGATGATTGGGAGCACGAAGAGATTTTTACTGATGATGATGAAACTACTGCTCCTGACCGTGAAGAAAGGGAGGATTTAGCCCCTGAAGTTCCTGCACCTCCAGAAATCAAGCAGGTTGTCTAGCCATTATGGGAAAAGAAAAAAACTTCTACTGATACATATCACTTCATCCATTTACTGGAAACCTATATATTTAACAGTTGAAGTAACTGTATAAGTTTTTCTCCAAAGGTGTTGTAAAAGGTGGTAAGAAATGAAATATTAGAAAATTCTGTTAAAAAGATGAAAAATGAAAAGAAAAGACAAGCTAATGCATGATGGGTGATGGAAAATAGGAAAGGTGGAGAGGAGATTATGAATTACCACAATTTTTTTCTGAAAGTAGCCCTATGAGTCTACAACCACCAGTCACATGCAAATATGTACGGGGTGCGAATAAATGAAAACAATATATTGATTTCTATTGACCTTTAAAATCACCTTGACTTCTGGTTGACATCTTGGATTGTCTGAAGCTTTTCTTTTTTTTTTTTTTTTCCTCTTTAAATATATAGTGTAACCTTTCAAGTCAAAGATATCAAATCTCAGATACAAATGGCTTGTTTGTATGGCTAAGCTTACTAGTTCAGTAAATTATTGTTGCATTTTGCAGGATGAAGACGATGAGGATGAAGATAATGAAGGGGAGGGGGGGCTGAGCAAATCTGGGAAAGAGTTGAAAAAATTGCTTAGGCGAACTGGTGGGCTTAATGATTCAGATGGAGAGGATGATGATGATGACGACGATGTAAGAGACTTGTCATTTCCCTTGACTAACAGCATGATTCAAAATTTTAAATTATAATGATCTACAAGCAGTGTTTTGAATGGAATCTGTATGAAGTGCATTCGATCATTTGTCAAGTTATTTTTATGCAGTCTGAAAAAGCATTATTTGAATGTCTTATGCTGTTTGCAAATGCCTTTTTCTACATAGTAAATGACAGAATCTTTGAGCAAATGAAAAAGTGAATGATAGGTTCATTAGCGGACCACCACCTTGGGTTGGCCTAGTGATTAATAAGGCCCATGCAATATTTGGTTCAATGCCACGTTGTTGATAGCTCAAGGGCAGTGACCGACAGTGCTATGATTGAACCAAAAATAAGTTTTTTTCACATCTTGATAGGATTCTGTTCATTTTTTTTCTATAGATTTACAGAGCTGATCTGTGTGATTACATTTTTGTTCTCTTTTCAAAAAACAAGCGCCATGTAATAATATAAGATTAGAGAAAATGAATTGAAGCCATAGTGGAAAATATTTAGGTTTAGTATCTTACGAGTTACTTTGTCAACGAAATGTAGTAGAGTCAATTTGTTCCATGAAAATAGTCTGGGTGTGCCAAAAAAGAAAGAAGATGGGCTCTATTAGTAACAAAGAAGATCGGTTAGCAGTGTCCATGATGCCTGTATTTTGTTGGAATCCTAACTGATCTGATTGTATCAGTATTATATATAATATAACCCTCTGCTTATTGTGAATACTGTCTGCATTTTTATCCTATTAAGTGATTTGAACTTTTTATGTATTCAGGTTGAGGAGGATACTGGTGGCACTCCATCTTTACCTTCGAAGCAGAAGGATACAGTTAAAGAAGAAGCTGCAGCCAGCAGTCCCTCAAAACTAACACCTTCTGGATCTGCCAAGGGAACCCCTTCTACTGCAAAGACAGCAAAAGGGAAAAGGAAAAATGGCGAGGATGTGAAACCATCCAGTGCACCTCCAAAGAAAATGAAAACAGAGACGGTATGTACCGCCAGCTCATGGTTTAAGCTCCGAAAAAGTACTTTTATTTGTATTAGAAGGATATGCGGCTAAGCCATTCTGTGCTGTAAACTAATATTTCTTGGGATATTCAGGAATCGAAGTCTACAGATGAAGGTGTATCTACTTCTAAAACTACGGCCTCAAAAGGTGCACCAGCATCAGTCAAAACTGAACCAGCATCGCATTCTGGACCCGTTACTGAGGAAGAAATTCGGGCTGTTTTGCGGCAAAGGACACCTGTAACTACACAGGATCTTGTTGCAAAATTCAAAGCAAGACTACGAACCCCAGAGGTATTGTTGTTATGTCTTCATGGCATGTTTTTACATACTGTTACTTTCGATGTGTCACCATATTTTGAAACAAGTTTCACTTTTTCGTTCAGAAGCGGGCAGTTTTTTGCAAGTGAAATGTGGCTAGCTTAAAACATGAAAGGATAATATTCAGAAAGTAGATAGACCATGACAATTCTCTGACGCCTTATATCATCCCATTATGCAGGACAAGAATGCTTTTGCAGAAATACTTAGGAGAATTTCAAGGATTCAAAAGACGAACGGAGGACCGAGTTACGTTGTGTTGAGAAAACCTGAAGACTAG

mRNA sequence

ATGTCGTTCGATTTGCTGCTGAAGCCATCGTGCAGTGGATGCGGATCCTCGACGGAGTTGTATGGGAGCAATTGCAAGCACATGACATTGTGCTTGACCTGTGGAAAAACTATGGCTGAGAACAAGGGGAAATGTTATGATTGTGGGGCTACTGTAACTCGCTTAATAAGAGAATACAATGTTCGAGCAAGTGGGAGTAGCGACAAGAACTACTTCATCGGTAGGTTCATGAGTGGGCTGCCTAACTTTTCGAAGAAGAGAAATGCTGAGAATAAATGGTCTCTTTACAAGGATGGTCTACAAGGACGCCAACTTACGGATGCCCTTCGGGAAAAGTACAAGAATAGACCCTGGCTCTTGGAAGATGAAACGGGCCAATTTCAATTCCAAGGTCATCTGGAGGGCTCACAATCAGCAACATACTACTTGCTTGTATTACAAGGGAAGGAATTTACTGCCATTCCTGCAGGTTCTTGGTACAACTTCAACAAAGTGGCACAGTATAAGCAACTTACGTTGGAGGAGGCAGAAGAGAAAATGAAGAATCGAAAGAAGACAGCAGATGGATATGAAAGATGGATGATGAAAGCTGCAAGTAATGGTCCTGCTGCATTTGGTGAAGTTGAGAAGTTTGATGATAAAGAAAGTGTTGGTACTAGTGGTAGGGGACGAAGAAAAGCTGCTGGTGATGAGAATGAAGGCAATGCCTCAGATAGGGGAGAAGAAGATGAAGAAGAAGAGGCACAAAGGAAGAACAGATTGGGACTCAATAAAAAGGGTGGCGGCGATGATGATGATGAGGAAGGTGCTAGGGGTGGTGACCATGACTTGGATGATGATGATATTGAGAAAGGAGATGATTGGGAGCACGAAGAGATTTTTACTGATGATGATGAAACTACTGCTCCTGACCGTGAAGAAAGGGAGGATTTAGCCCCTGAAGTTCCTGCACCTCCAGAAATCAAGCAGGATGAAGACGATGAGGATGAAGATAATGAAGGGGAGGGGGGGCTGAGCAAATCTGGGAAAGAGTTGAAAAAATTGCTTAGGCGAACTGGTGGGCTTAATGATTCAGATGGAGAGGATGATGATGATGACGACGATGTTGAGGAGGATACTGGTGGCACTCCATCTTTACCTTCGAAGCAGAAGGATACAGTTAAAGAAGAAGCTGCAGCCAGCAGTCCCTCAAAACTAACACCTTCTGGATCTGCCAAGGGAACCCCTTCTACTGCAAAGACAGCAAAAGGGAAAAGGAAAAATGGCGAGGATGTGAAACCATCCAGTGCACCTCCAAAGAAAATGAAAACAGAGACGGAATCGAAGTCTACAGATGAAGGTGTATCTACTTCTAAAACTACGGCCTCAAAAGGTGCACCAGCATCAGTCAAAACTGAACCAGCATCGCATTCTGGACCCGTTACTGAGGAAGAAATTCGGGCTGTTTTGCGGCAAAGGACACCTGTAACTACACAGGATCTTGTTGCAAAATTCAAAGCAAGACTACGAACCCCAGAGGACAAGAATGCTTTTGCAGAAATACTTAGGAGAATTTCAAGGATTCAAAAGACGAACGGAGGACCGAGTTACGTTGTGTTGAGAAAACCTGAAGACTAG

Coding sequence (CDS)

ATGTCGTTCGATTTGCTGCTGAAGCCATCGTGCAGTGGATGCGGATCCTCGACGGAGTTGTATGGGAGCAATTGCAAGCACATGACATTGTGCTTGACCTGTGGAAAAACTATGGCTGAGAACAAGGGGAAATGTTATGATTGTGGGGCTACTGTAACTCGCTTAATAAGAGAATACAATGTTCGAGCAAGTGGGAGTAGCGACAAGAACTACTTCATCGGTAGGTTCATGAGTGGGCTGCCTAACTTTTCGAAGAAGAGAAATGCTGAGAATAAATGGTCTCTTTACAAGGATGGTCTACAAGGACGCCAACTTACGGATGCCCTTCGGGAAAAGTACAAGAATAGACCCTGGCTCTTGGAAGATGAAACGGGCCAATTTCAATTCCAAGGTCATCTGGAGGGCTCACAATCAGCAACATACTACTTGCTTGTATTACAAGGGAAGGAATTTACTGCCATTCCTGCAGGTTCTTGGTACAACTTCAACAAAGTGGCACAGTATAAGCAACTTACGTTGGAGGAGGCAGAAGAGAAAATGAAGAATCGAAAGAAGACAGCAGATGGATATGAAAGATGGATGATGAAAGCTGCAAGTAATGGTCCTGCTGCATTTGGTGAAGTTGAGAAGTTTGATGATAAAGAAAGTGTTGGTACTAGTGGTAGGGGACGAAGAAAAGCTGCTGGTGATGAGAATGAAGGCAATGCCTCAGATAGGGGAGAAGAAGATGAAGAAGAAGAGGCACAAAGGAAGAACAGATTGGGACTCAATAAAAAGGGTGGCGGCGATGATGATGATGAGGAAGGTGCTAGGGGTGGTGACCATGACTTGGATGATGATGATATTGAGAAAGGAGATGATTGGGAGCACGAAGAGATTTTTACTGATGATGATGAAACTACTGCTCCTGACCGTGAAGAAAGGGAGGATTTAGCCCCTGAAGTTCCTGCACCTCCAGAAATCAAGCAGGATGAAGACGATGAGGATGAAGATAATGAAGGGGAGGGGGGGCTGAGCAAATCTGGGAAAGAGTTGAAAAAATTGCTTAGGCGAACTGGTGGGCTTAATGATTCAGATGGAGAGGATGATGATGATGACGACGATGTTGAGGAGGATACTGGTGGCACTCCATCTTTACCTTCGAAGCAGAAGGATACAGTTAAAGAAGAAGCTGCAGCCAGCAGTCCCTCAAAACTAACACCTTCTGGATCTGCCAAGGGAACCCCTTCTACTGCAAAGACAGCAAAAGGGAAAAGGAAAAATGGCGAGGATGTGAAACCATCCAGTGCACCTCCAAAGAAAATGAAAACAGAGACGGAATCGAAGTCTACAGATGAAGGTGTATCTACTTCTAAAACTACGGCCTCAAAAGGTGCACCAGCATCAGTCAAAACTGAACCAGCATCGCATTCTGGACCCGTTACTGAGGAAGAAATTCGGGCTGTTTTGCGGCAAAGGACACCTGTAACTACACAGGATCTTGTTGCAAAATTCAAAGCAAGACTACGAACCCCAGAGGACAAGAATGCTTTTGCAGAAATACTTAGGAGAATTTCAAGGATTCAAAAGACGAACGGAGGACCGAGTTACGTTGTGTTGAGAAAACCTGAAGACTAG

Protein sequence

MSFDLLLKPSCSGCGSSTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASGSSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKESVGTSGRGRRKAAGDENEGNASDRGEEDEEEEAQRKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVPAPPEIKQDEDDEDEDNEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDTGGTPSLPSKQKDTVKEEAAASSPSKLTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKSTDEGVSTSKTTASKGAPASVKTEPASHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

Homology

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BLAST of CmUC07G128380 vs. NCBI nr
Match: XP_038888042.1 (transcription initiation factor IIF subunit alpha isoform X1 [Benincasa hispida])

HSP 1 Score: 986.1 bits (2548), Expect = 1.2e-283
Identity = 522/538 (97.03%), Postives = 528/538 (98.14%), Query Frame = 0


Query: 1   MSFDLLLKPSCSGCGSSTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
           MSFDL+LKPSCSGCGS+TELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN
Sbjct: 1   MSFDLMLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60

Query: 61  VRASGSSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGLQGRQLTDALREKYKNRPWLL 120
           VRAS SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGLQGRQLTDALREKYKNRPWLL
Sbjct: 61  VRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGLQGRQLTDALREKYKNRPWLL 120

Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
           EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKESVGTSGRGRRKAAGDENEGNASDRG 240
           KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKE VGTSGRGRRK  GDENEGN SDRG
Sbjct: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKEGVGTSGRGRRKPTGDENEGNVSDRG 240

Query: 241 EEDEEEEAQRKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDDET 300
           EEDEEEEAQRKNRLGLNKKGGGDDDDEEG RGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Sbjct: 241 EEDEEEEAQRKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET 300

Query: 301 TAPDREEREDLAPEVPAPPEIKQDEDDEDEDNEGEGGLSKSGKELKKLLRRTGGLNDSDG 360
           TAPDREEREDLAPEVPAPPEIKQDEDDEDE+NEGEGGLSKSGKELKKLLRRTGGLNDSDG
Sbjct: 301 TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG 360

Query: 361 EDDDDDDDVEEDTGGTPSLPSKQKDTVKEEAAASSPSKLTPSGSAKGTPSTAKTAKGKRK 420
           EDDDDDDDV+EDTGGTP LPSKQKDTVKEEAAA+SPSK TPSGSAKGTPSTAKTAKGKRK
Sbjct: 361 EDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK 420

Query: 421 NGEDVKPSSAPPKKMKTETESKSTDEGVSTSKTTASKGAPASVKTEPASHSGPVTEEEIR 480
           NGEDVKPSSAPPKKMKTETESKSTDE VSTSK+TASKGAPA VKTEPASHSGPVTEEEIR
Sbjct: 421 NGEDVKPSSAPPKKMKTETESKSTDE-VSTSKSTASKGAPALVKTEPASHSGPVTEEEIR 480

Query: 481 AVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 539
           AVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Sbjct: 481 AVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 537

[Close]

BLAST of CmUC07G128380 vs. NCBI nr
Match: XP_004152016.1 (transcription initiation factor IIF subunit alpha isoform X1 [Cucumis sativus] >XP_011651639.1 transcription initiation factor IIF subunit alpha isoform X1 [Cucumis sativus] >KGN58337.1 hypothetical protein Csa_017587 [Cucumis sativus])

HSP 1 Score: 979.5 bits (2531), Expect = 1.1e-281
Identity = 515/538 (95.72%), Postives = 528/538 (98.14%), Query Frame = 0


Query: 1   MSFDLLLKPSCSGCGSSTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
           MSFDLLLK SCSGCGS+TELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN
Sbjct: 1   MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60

Query: 61  VRASGSSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGLQGRQLTDALREKYKNRPWLL 120
           VRAS S+DKNYFIGRFMSGLPNFSKKRNAENKWSLYK+GLQGRQL+DALREKYKNRPWLL
Sbjct: 61  VRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120

Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
           EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKESVGTSGRGRRKAAGDENEGNASDRG 240
           KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKE+VGTSGRGRRK  GDENEGN SDRG
Sbjct: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRG 240

Query: 241 EEDEEEEAQRKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDDET 300
           EEDEEEEA RKNRLGL+KKGGGDDDDEEG RGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Sbjct: 241 EEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET 300

Query: 301 TAPDREEREDLAPEVPAPPEIKQDEDDEDEDNEGEGGLSKSGKELKKLLRRTGGLNDSDG 360
           TAPDREEREDLAPEVPAPPEIKQDE+DEDE+NEGEGGLSKSGKELKKLLRRTGGLNDSDG
Sbjct: 301 TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG 360

Query: 361 EDDDDDDDVEEDTGGTPSLPSKQKDTVKEEAAASSPSKLTPSGSAKGTPSTAKTAKGKRK 420
           EDDDDDDDV+EDTGGTP LPSKQKDTVKEEAAA+SPSK TPSGSAKGTPSTAKTAKGKRK
Sbjct: 361 EDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK 420

Query: 421 NGEDVKPSSAPPKKMKTETESKSTDEGVSTSKTTASKGAPASVKTEPASHSGPVTEEEIR 480
           NGEDVKPSSAPPKKMKTETESK+TDEGV TSK+TASKGAPASVKTEP+SHSGPVTEEEIR
Sbjct: 421 NGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIR 480

Query: 481 AVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 539
           AVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Sbjct: 481 AVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 538

[Close]

BLAST of CmUC07G128380 vs. NCBI nr
Match: XP_016900419.1 (PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIF subunit alpha [Cucumis melo])

HSP 1 Score: 976.1 bits (2522), Expect = 1.2e-280
Identity = 514/538 (95.54%), Postives = 525/538 (97.58%), Query Frame = 0


Query: 1   MSFDLLLKPSCSGCGSSTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
           MSFDLLLKPSCSGCGS+TELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN
Sbjct: 1   MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60

Query: 61  VRASGSSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGLQGRQLTDALREKYKNRPWLL 120
           VRAS SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYK+GLQGRQLTDALREKYKNRPWLL
Sbjct: 61  VRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLL 120

Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
           EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAE KM
Sbjct: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEXKM 180

Query: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKESVGTSGRGRRKAAGDENEGNASDRG 240
           KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKE+VGTSGRGRRK  GDENEGN SDRG
Sbjct: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRG 240

Query: 241 EEDEEEEAQRKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDDET 300
           EEDEEEEA RKNRLGL+KKGGGDDDDEEG RGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Sbjct: 241 EEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET 300

Query: 301 TAPDREEREDLAPEVPAPPEIKQDEDDEDEDNEGEGGLSKSGKELKKLLRRTGGLNDSDG 360
           TAPDREEREDLAPEVPAPPEIKQDE+DEDE+NEGEGGLSKSGKELKKLLRRTGGLNDSDG
Sbjct: 301 TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG 360

Query: 361 EDDDDDDDVEEDTGGTPSLPSKQKDTVKEEAAASSPSKLTPSGSAKGTPSTAKTAKGKRK 420
           EDD+DDDDV+EDTGGTP LPSKQKDTVKEEAAA+SPSK TPSGSAKGTPSTAKTAKGKRK
Sbjct: 361 EDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK 420

Query: 421 NGEDVKPSSAPPKKMKTETESKSTDEGVSTSKTTASKGAPASVKTEPASHSGPVTEEEIR 480
           NGEDVKPSSAPPKKMKTETE K TDEGV TSK+TASKGAPASVKTEP+SHSGPVTEEEIR
Sbjct: 421 NGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIR 480

Query: 481 AVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 539
           AVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Sbjct: 481 AVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED 538

[Close]

BLAST of CmUC07G128380 vs. NCBI nr
Match: XP_022931161.1 (transcription initiation factor IIF subunit alpha-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 947.6 bits (2448), Expect = 4.7e-272
Identity = 504/539 (93.51%), Postives = 518/539 (96.10%), Query Frame = 0


Query: 1   MSFDLLLKPSCSGCGSSTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
           MS DLLLKPSCSGCGS+TELYGSNCKHMTLCL CGKTMAENKGKCYDCGATVTRLIREYN
Sbjct: 1   MSLDLLLKPSCSGCGSTTELYGSNCKHMTLCLRCGKTMAENKGKCYDCGATVTRLIREYN 60

Query: 61  VRASGSSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGLQGRQLTDALREKYKNRPWLL 120
           VRAS SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYK+GLQGRQLTDALREKYKNRPWLL
Sbjct: 61  VRASSSSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLL 120

Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
           EDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQSQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKESVGTSGRGRRKAAGDENEGNASDRG 240
           KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDK+SVG +GRGRRK   DENEGN SDRG
Sbjct: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDSVGATGRGRRKPTSDENEGNVSDRG 240

Query: 241 EEDEEEEAQRKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDDET 300
           EEDEEEEA RKNRLGLNKKGGGDDDDEEG RGG+HDLDDDDIEKGDDWEHEEIFTDDDET
Sbjct: 241 EEDEEEEAARKNRLGLNKKGGGDDDDEEGPRGGNHDLDDDDIEKGDDWEHEEIFTDDDET 300

Query: 301 TAPDREEREDLAPEVPAPPEIKQDEDDEDEDNEGEGGLSKSGKELKKLLRRTGGLNDSDG 360
           TAPDREEREDLAPEVPAPPEIKQDE+DEDE+NEGEGGLSKSGKELKKLLRRTGGLNDSDG
Sbjct: 301 TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG 360

Query: 361 -EDDDDDDDVEEDTGGTPSLPSKQKDTVKEEAAASSPSKLTPSGSAKGTPSTAKTAKGKR 420
            E+DDDDDD EE++GGTP  PSKQKD VKEEAAA+SPSK  PSGSAKGTPSTAKTAKGKR
Sbjct: 361 EEEDDDDDDAEEESGGTPVAPSKQKDAVKEEAAANSPSKPAPSGSAKGTPSTAKTAKGKR 420

Query: 421 KNGEDVKPSSAPPKKMKTETESKSTDEGVSTSKTTASKGAPASVKTEPASHSGPVTEEEI 480
           KNGEDVKPSSAPPKKMKTETESKSTDEGVSTS++TASKGA ASVKTEPAS SGPVTEEEI
Sbjct: 421 KNGEDVKPSSAPPKKMKTETESKSTDEGVSTSRSTASKGAAASVKTEPASASGPVTEEEI 480

Query: 481 RAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 539
           RAVLRQRTPVTTQDLVAKFKARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Sbjct: 481 RAVLRQRTPVTTQDLVAKFKARLRSHEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 539

[Close]

BLAST of CmUC07G128380 vs. NCBI nr
Match: KAG6606328.1 (Transcription initiation factor IIF subunit alpha, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 946.0 bits (2444), Expect = 1.4e-271
Identity = 503/539 (93.32%), Postives = 518/539 (96.10%), Query Frame = 0


Query: 1   MSFDLLLKPSCSGCGSSTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
           MS DLLLKPSCSGCGS+TELYGSNCKHMTLCL CGKTMAENKGKCYDCGATVTRLIREYN
Sbjct: 27  MSLDLLLKPSCSGCGSTTELYGSNCKHMTLCLRCGKTMAENKGKCYDCGATVTRLIREYN 86

Query: 61  VRASGSSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGLQGRQLTDALREKYKNRPWLL 120
           VRAS SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYK+GLQGRQLTDALREKYKNRPWLL
Sbjct: 87  VRASSSSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLL 146

Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
           EDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 147 EDETGQSQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 206

Query: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKESVGTSGRGRRKAAGDENEGNASDRG 240
           KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDK+SVG +GRGRRK   DENEGN SDRG
Sbjct: 207 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDSVGATGRGRRKPTSDENEGNVSDRG 266

Query: 241 EEDEEEEAQRKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDDET 300
           EEDEEEEA RKNRLGLNKKGGGDDDDEEG RGGDHDLDDDDI+KGDDWEHEEIFTDDDET
Sbjct: 267 EEDEEEEAARKNRLGLNKKGGGDDDDEEGHRGGDHDLDDDDIKKGDDWEHEEIFTDDDET 326

Query: 301 TAPDREEREDLAPEVPAPPEIKQDEDDEDEDNEGEGGLSKSGKELKKLLRRTGGLNDSDG 360
           TAPDREEREDLAPEVPAPPEIKQDE+DEDE+NEGEGGLSKSGKELKKLLRRTGGLNDSDG
Sbjct: 327 TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG 386

Query: 361 EDD-DDDDDVEEDTGGTPSLPSKQKDTVKEEAAASSPSKLTPSGSAKGTPSTAKTAKGKR 420
           E++ DDDDD EE++GGTP  PSKQKD VKEEAAA+SPSK  PSGSAKGTPSTAKTAKGKR
Sbjct: 387 EEENDDDDDAEEESGGTPVAPSKQKDAVKEEAAANSPSKPAPSGSAKGTPSTAKTAKGKR 446

Query: 421 KNGEDVKPSSAPPKKMKTETESKSTDEGVSTSKTTASKGAPASVKTEPASHSGPVTEEEI 480
           KNGEDVKPSSAPPKKMKTETESKSTDEGVSTS++TASKGA ASVKTEPAS SGPVTEEEI
Sbjct: 447 KNGEDVKPSSAPPKKMKTETESKSTDEGVSTSRSTASKGAAASVKTEPASASGPVTEEEI 506

Query: 481 RAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 539
           RAVLRQRTPVTTQDLVAKFKARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Sbjct: 507 RAVLRQRTPVTTQDLVAKFKARLRSHEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 565

[Close]

BLAST of CmUC07G128380 vs. ExPASy Swiss-Prot
Match: Q9SU25 (Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana OX=3702 GN=RAP74 PE=1 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 8.0e-182
Identity = 371/550 (67.45%), Postives = 437/550 (79.45%), Query Frame = 0


Query: 1   MSFDLLLKPSCSGCGSSTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
           MS  L L  SC GCGS ++LYGS+C+HMTLCL CG+TMA+NK KC++CG  VTRLIREYN
Sbjct: 1   MSNCLQLNTSCVGCGSQSDLYGSSCRHMTLCLKCGRTMAQNKSKCHECGTVVTRLIREYN 60

Query: 61  VRASGSSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGLQGRQLTDALREKYKNRPWLL 120
           VRA+  +DKNYFIGRF++GLPNF  K+ +ENKWSL KD  QGRQ TDA REK KN+PW+L
Sbjct: 61  VRAAAPTDKNYFIGRFVTGLPNF--KKGSENKWSLRKDIPQGRQFTDAQREKLKNKPWIL 120

Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
           EDETGQFQ+QGHLEGSQSATYYLLV+Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQFQYQGHLEGSQSATYYLLVMQNKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKESVGTS---GRGRRKAA-GDENEGNA 240
           KNR+KTADGY+RWMMKAA+NGPA FGEV+  ++KES GTS   GRGR+K++ GDE EGN 
Sbjct: 181 KNRRKTADGYQRWMMKAANNGPALFGEVD--NEKESGGTSGGGGRGRKKSSGGDEEEGNV 240

Query: 241 SDRGEEDEEEEAQRKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTD 300
           SDRG+EDEEEEA RK+RLGLN+K   DDDDEEG RGGD D+DDDDIEKGDDWEHEEIFTD
Sbjct: 241 SDRGDEDEEEEASRKSRLGLNRK-SNDDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTD 300

Query: 301 DDETTAPDREERED-LAPEVPAPPEIKQDEDDEDEDNEGEGGLSKSGKELKKLLRRTGGL 360
           DDE    D EERED LAPE+PAPPEIKQDEDDE E+ E EGGLSKSGKELKKLL +  GL
Sbjct: 301 DDEAVGNDPEEREDLLAPEIPAPPEIKQDEDDE-ENEEEEGGLSKSGKELKKLLGKANGL 360

Query: 361 NDSDGEDDDDDDDVEEDTGGTPSLPSKQKDTVKEEAAASSPSKLTPSGSAKGTPSTAKTA 420
           ++SD +DDDD DD EE   GT +  SKQK+  KEE   ++P+K  PSG  +GTP  AK +
Sbjct: 361 DESDEDDDDDSDDEEETNYGTVT-NSKQKEAAKEEPVDNAPAKPAPSGPPRGTP-PAKPS 420

Query: 421 KGKRK--NGEDVKPSSAPPKKMKTETESKSTDEGVSTSKTTASKGAPASVKTEPAS---- 480
           KGKRK  +G+  KPSS+  KK+KTE + KS+ +    +  + S     +VK EPAS    
Sbjct: 421 KGKRKLNDGDSKKPSSSVQKKVKTENDPKSSLKEERANTVSKSNTPTKAVKAEPASAPAS 480

Query: 481 ----HSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTN 536
                +GPVTE+EIRAVL ++  VTTQDLV++FKARL+T EDKNAFA ILR+IS+IQK  
Sbjct: 481 SSSAATGPVTEDEIRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISKIQKNA 540

[Close]

BLAST of CmUC07G128380 vs. ExPASy Swiss-Prot
Match: Q54WV4 (General transcription factor IIF subunit 1 OS=Dictyostelium discoideum OX=44689 GN=gtf2f1 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.3e-14
Identity = 118/441 (26.76%), Postives = 197/441 (44.67%), Query Frame = 0


Query: 114 KNRPWLLEDETGQFQFQGHLEGSQ-SATYYLLVLQGK-EFTAIPAGSWYNFNKVAQYKQL 173
           K  PW LED  G   +QG++EG+Q S+ Y+L + Q      A+P   WYNF    +++ L
Sbjct: 146 KTIPWKLEDSEGNNTYQGNVEGNQASSNYFLFMFQSDGSIKAVPCNDWYNFRPKKEFQSL 205

Query: 174 TLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKESVGTSGRGRRKAAGDE 233
           T EEAE+ MK + +  D +   + K      +  G  E    K          R    D 
Sbjct: 206 TTEEAEDFMKKKNQEWDVFTSRLQKKTDPSGSGSGGSESSGKKSIEELEEAEHRNRNEDP 265

Query: 234 NEGNASDRGEEDEEEEAQRKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHE 293
           N    ++  ++ ++  A+R+ R     +G G+D D   A   +   DDDD         +
Sbjct: 266 NRYKTTNEEKKKKKAPARRRER---EDEGNGEDGD---APDFESKFDDDD---------D 325

Query: 294 EIFTDDDETTAPDREEREDLAPEVPAPPEIKQDEDDEDEDNEGEGGLSKSGKELKKLLRR 353
           + + D D  T  D               +I++DE++ED D      L++ G E+KK++++
Sbjct: 326 DTYMDGDGLTGEDEN-------------QIEEDEEEEDVD------LTEGGLEMKKMIKK 385

Query: 354 TGGLNDSDGEDDDDDDDVEEDTGGTPSLPSKQKDTVKEEAAASSPSKL-----------T 413
               NDS+ +D  DDDD +++ GGT     +  D   E+      S L           T
Sbjct: 386 QQQQNDSE-DDLADDDDKKDNNGGTGGGDDEDDDEDDEDPDQDDLSNLPKVFGKSNADGT 445

Query: 414 PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKSTDEGVSTSKTTASKGAP 473
            + S K      K +K  +K+ +  K SS  PK  + +++   +D  V   ++   K  P
Sbjct: 446 TNSSVKKEDDGGKDSKSSKKSKKKDKDSS--PKSKEKKSKKNKSDSSVDNRESKKIKKEP 505

Query: 474 ASVK-TEPASHS--------------GPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTP 527
           +S +  +P S S               P TEE I+ VL++   V + DL+  FK  L+ P
Sbjct: 506 SSPQAVQPNSPSQQQQQQQQNIDPNDPPFTEEYIKIVLQKSKKVKSLDLINIFKGPLKNP 549

[Close]

BLAST of CmUC07G128380 vs. ExPASy Swiss-Prot
Match: Q05913 (General transcription factor IIF subunit 1 OS=Drosophila melanogaster OX=7227 GN=TfIIFalpha PE=1 SV=3)

HSP 1 Score: 47.8 bits (112), Expect = 4.6e-04
Identity = 126/476 (26.47%), Postives = 206/476 (43.28%), Query Frame = 0


Query: 116 RPWLLE--DETGQFQFQGHLEG--SQSATYYLLV-LQGKEFTAIPAGSWYNFNKVAQYKQ 175
           +PW+L+   +TG+ +F+G  EG   ++A +Y+          A P   WYNF  + +YK 
Sbjct: 123 QPWILKVGGKTGK-KFKGIREGGVGENAAFYVFTHAPDGAIEAYPLTEWYNFQPIQRYKS 182

Query: 176 LTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKESVGTSGRGRRKAAGD 235
           L+ EEAE++   RKK  + +   + K         G+ E+  D E         +K+   
Sbjct: 183 LSAEEAEQEFGRRKKVMNYFSLMLRKRLR------GDEEEEQDPEEAKLIKAATKKS--- 242

Query: 236 ENEGNASDRGE-EDEEEEAQRKNRLGLNKKGGGDDDD----EEGARGGD-----HDLDDD 295
             E   +D  E  D E+E+  ++     KK   D DD     +G +G D      D+DD+
Sbjct: 243 -KELKITDMDEWIDSEDESDSEDEEDKKKKEQEDSDDGKAKGKGKKGADKKKKKRDVDDE 302

Query: 296 DIEKGDDWEHEEIFTDDDETTA---PDREERED---------------LAPEVPAPPEIK 355
             E+ DD + E    D D +++   PD E + D               L  +     E K
Sbjct: 303 AFEESDDGDEEGREMDYDTSSSEDEPDPEAKVDKDMKGVAEEDALRKLLTSDEEEDDEKK 362

Query: 356 QDEDD-EDEDNE------GEGGLSKSGKELKKL----LRRTGGLNDSDGEDDDDDDDVEE 415
            DE D ED D E      G+  +SK  K+ K        ++ G  DS  +   D  D E+
Sbjct: 363 SDESDKEDADGEKKKKDKGKDEVSKDKKKKKPTKDDKKGKSNGSGDSSTDFSSDSTDSED 422

Query: 416 DTGGTPS-----LPSKQKDTVKEEAAASSPSKLTPSGSA----KGTPSTAKTAKGKRKNG 475
           D    P      +  K K+  KE+ +A+S   +  S +A      TP+ +  A  ++ N 
Sbjct: 423 DLSNGPPKKKVVVKDKDKEKEKEKESAASSKVIASSSNANKSRSATPTLSTDASKRKMNS 482

Query: 476 EDVKPSSAPPKKMKTETESKSTDEGVSTSKTTASKGAPASVKTEPASHSGPVTEEEIRAV 535
                +++      T T +K     +STS  T+  G     K E       +TEE +R  
Sbjct: 483 LPSDLTASDTSNSPTSTPAKRPKNEISTSLPTSFSGG----KVEDYG----ITEEAVRRY 542

[Close]

BLAST of CmUC07G128380 vs. ExPASy TrEMBL
Match: A0A0A0LCA6 (Transcription initiation factor IIF subunit alpha OS=Cucumis sativus OX=3659 GN=Csa_3G624050 PE=3 SV=1)

HSP 1 Score: 979.5 bits (2531), Expect = 5.4e-282
Identity = 515/538 (95.72%), Postives = 528/538 (98.14%), Query Frame = 0


Query: 1   MSFDLLLKPSCSGCGSSTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
           MSFDLLLK SCSGCGS+TELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN
Sbjct: 1   MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60

Query: 61  VRASGSSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGLQGRQLTDALREKYKNRPWLL 120
           VRAS S+DKNYFIGRFMSGLPNFSKKRNAENKWSLYK+GLQGRQL+DALREKYKNRPWLL
Sbjct: 61  VRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120

Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
           EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKESVGTSGRGRRKAAGDENEGNASDRG 240
           KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKE+VGTSGRGRRK  GDENEGN SDRG
Sbjct: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRG 240

Query: 241 EEDEEEEAQRKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDDET 300
           EEDEEEEA RKNRLGL+KKGGGDDDDEEG RGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Sbjct: 241 EEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET 300

Query: 301 TAPDREEREDLAPEVPAPPEIKQDEDDEDEDNEGEGGLSKSGKELKKLLRRTGGLNDSDG 360
           TAPDREEREDLAPEVPAPPEIKQDE+DEDE+NEGEGGLSKSGKELKKLLRRTGGLNDSDG
Sbjct: 301 TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG 360

Query: 361 EDDDDDDDVEEDTGGTPSLPSKQKDTVKEEAAASSPSKLTPSGSAKGTPSTAKTAKGKRK 420
           EDDDDDDDV+EDTGGTP LPSKQKDTVKEEAAA+SPSK TPSGSAKGTPSTAKTAKGKRK
Sbjct: 361 EDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK 420

Query: 421 NGEDVKPSSAPPKKMKTETESKSTDEGVSTSKTTASKGAPASVKTEPASHSGPVTEEEIR 480
           NGEDVKPSSAPPKKMKTETESK+TDEGV TSK+TASKGAPASVKTEP+SHSGPVTEEEIR
Sbjct: 421 NGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIR 480

Query: 481 AVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 539
           AVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Sbjct: 481 AVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 538

[Close]

BLAST of CmUC07G128380 vs. ExPASy TrEMBL
Match: A0A1S4DWR2 (Transcription initiation factor IIF subunit alpha OS=Cucumis melo OX=3656 GN=LOC103489800 PE=3 SV=1)

HSP 1 Score: 976.1 bits (2522), Expect = 6.0e-281
Identity = 514/538 (95.54%), Postives = 525/538 (97.58%), Query Frame = 0


Query: 1   MSFDLLLKPSCSGCGSSTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
           MSFDLLLKPSCSGCGS+TELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN
Sbjct: 1   MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60

Query: 61  VRASGSSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGLQGRQLTDALREKYKNRPWLL 120
           VRAS SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYK+GLQGRQLTDALREKYKNRPWLL
Sbjct: 61  VRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLL 120

Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
           EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAE KM
Sbjct: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEXKM 180

Query: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKESVGTSGRGRRKAAGDENEGNASDRG 240
           KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKE+VGTSGRGRRK  GDENEGN SDRG
Sbjct: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRG 240

Query: 241 EEDEEEEAQRKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDDET 300
           EEDEEEEA RKNRLGL+KKGGGDDDDEEG RGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Sbjct: 241 EEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET 300

Query: 301 TAPDREEREDLAPEVPAPPEIKQDEDDEDEDNEGEGGLSKSGKELKKLLRRTGGLNDSDG 360
           TAPDREEREDLAPEVPAPPEIKQDE+DEDE+NEGEGGLSKSGKELKKLLRRTGGLNDSDG
Sbjct: 301 TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG 360

Query: 361 EDDDDDDDVEEDTGGTPSLPSKQKDTVKEEAAASSPSKLTPSGSAKGTPSTAKTAKGKRK 420
           EDD+DDDDV+EDTGGTP LPSKQKDTVKEEAAA+SPSK TPSGSAKGTPSTAKTAKGKRK
Sbjct: 361 EDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK 420

Query: 421 NGEDVKPSSAPPKKMKTETESKSTDEGVSTSKTTASKGAPASVKTEPASHSGPVTEEEIR 480
           NGEDVKPSSAPPKKMKTETE K TDEGV TSK+TASKGAPASVKTEP+SHSGPVTEEEIR
Sbjct: 421 NGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIR 480

Query: 481 AVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 539
           AVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Sbjct: 481 AVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED 538

[Close]

BLAST of CmUC07G128380 vs. ExPASy TrEMBL
Match: A0A6J1ESX1 (Transcription initiation factor IIF subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC111437424 PE=3 SV=1)

HSP 1 Score: 947.6 bits (2448), Expect = 2.3e-272
Identity = 504/539 (93.51%), Postives = 518/539 (96.10%), Query Frame = 0


Query: 1   MSFDLLLKPSCSGCGSSTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
           MS DLLLKPSCSGCGS+TELYGSNCKHMTLCL CGKTMAENKGKCYDCGATVTRLIREYN
Sbjct: 1   MSLDLLLKPSCSGCGSTTELYGSNCKHMTLCLRCGKTMAENKGKCYDCGATVTRLIREYN 60

Query: 61  VRASGSSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGLQGRQLTDALREKYKNRPWLL 120
           VRAS SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYK+GLQGRQLTDALREKYKNRPWLL
Sbjct: 61  VRASSSSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLL 120

Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
           EDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQSQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKESVGTSGRGRRKAAGDENEGNASDRG 240
           KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDK+SVG +GRGRRK   DENEGN SDRG
Sbjct: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDSVGATGRGRRKPTSDENEGNVSDRG 240

Query: 241 EEDEEEEAQRKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDDET 300
           EEDEEEEA RKNRLGLNKKGGGDDDDEEG RGG+HDLDDDDIEKGDDWEHEEIFTDDDET
Sbjct: 241 EEDEEEEAARKNRLGLNKKGGGDDDDEEGPRGGNHDLDDDDIEKGDDWEHEEIFTDDDET 300

Query: 301 TAPDREEREDLAPEVPAPPEIKQDEDDEDEDNEGEGGLSKSGKELKKLLRRTGGLNDSDG 360
           TAPDREEREDLAPEVPAPPEIKQDE+DEDE+NEGEGGLSKSGKELKKLLRRTGGLNDSDG
Sbjct: 301 TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG 360

Query: 361 -EDDDDDDDVEEDTGGTPSLPSKQKDTVKEEAAASSPSKLTPSGSAKGTPSTAKTAKGKR 420
            E+DDDDDD EE++GGTP  PSKQKD VKEEAAA+SPSK  PSGSAKGTPSTAKTAKGKR
Sbjct: 361 EEEDDDDDDAEEESGGTPVAPSKQKDAVKEEAAANSPSKPAPSGSAKGTPSTAKTAKGKR 420

Query: 421 KNGEDVKPSSAPPKKMKTETESKSTDEGVSTSKTTASKGAPASVKTEPASHSGPVTEEEI 480
           KNGEDVKPSSAPPKKMKTETESKSTDEGVSTS++TASKGA ASVKTEPAS SGPVTEEEI
Sbjct: 421 KNGEDVKPSSAPPKKMKTETESKSTDEGVSTSRSTASKGAAASVKTEPASASGPVTEEEI 480

Query: 481 RAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 539
           RAVLRQRTPVTTQDLVAKFKARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Sbjct: 481 RAVLRQRTPVTTQDLVAKFKARLRSHEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 539

[Close]

BLAST of CmUC07G128380 vs. ExPASy TrEMBL
Match: A0A6J1E3E1 (Transcription initiation factor IIF subunit alpha OS=Momordica charantia OX=3673 GN=LOC111025673 PE=3 SV=1)

HSP 1 Score: 940.3 bits (2429), Expect = 3.6e-270
Identity = 500/539 (92.76%), Postives = 518/539 (96.10%), Query Frame = 0


Query: 1   MSFDLLLKPSCSGCGSSTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
           MSFDLLLKPSCSGCGSST+LYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN
Sbjct: 1   MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60

Query: 61  VRASGSSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGLQGRQLTDALREKYKNRPWLL 120
           VRAS SSDKNYFIGRFMSGLPNFS+KRNAENKWSLYK+GLQGRQL+DALREKYKNRPWLL
Sbjct: 61  VRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120

Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
           EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKESVGTSGRGRRKAAGDENEGNASDRG 240
           KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDK++VG SGRGRRK  GDENEGNASDRG
Sbjct: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRG 240

Query: 241 EEDEEEEAQRKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDDET 300
           EEDEEEEA RKNRLGLNKK  GDDDDEEG RGGDHD+DDDDIEKGDDWEHEEIFTDDDET
Sbjct: 241 EEDEEEEAARKNRLGLNKK-SGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDET 300

Query: 301 TAPDREEREDLAPEVPAPPEIKQDEDDEDEDNEGEGGLSKSGKELKKLLRRTGGLNDSDG 360
           TAPDREEREDLAPEVPAPPEIKQDEDDEDE+NEGEGGLSKSGKELKKLLRRTGGLNDSDG
Sbjct: 301 TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG 360

Query: 361 EDDDDDDDVEEDTGGTPSLPSKQKDTVKEEAAASSPSKLTPSGSAKGTPSTAKTAKGKRK 420
           EDDDDDDDVEED GGTP + SKQKDTVKEEAAASSPSK  PSGS+KGTPS+ K +KGKRK
Sbjct: 361 EDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKGKRK 420

Query: 421 -NGEDVKPSSAPPKKMKTETESKSTDEGVSTSKTTASKGAPASVKTEPASHSGPVTEEEI 480
            NG+DVKPS+ PPKK+KTET+SKSTDEGVSTSK+TASKGAPASVKTE A  SGPVTEEEI
Sbjct: 421 LNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEI 480

Query: 481 RAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 539
           RAVLRQRTPVTTQDLVAKFKARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Sbjct: 481 RAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 538

[Close]

BLAST of CmUC07G128380 vs. ExPASy TrEMBL
Match: A0A6J1K1N5 (Transcription initiation factor IIF subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC111491607 PE=3 SV=1)

HSP 1 Score: 938.3 bits (2424), Expect = 1.4e-269
Identity = 501/542 (92.44%), Postives = 517/542 (95.39%), Query Frame = 0


Query: 1   MSFDLLLKPSCSGCGSSTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
           MS DLLLKPSCSGCGS+TELYGSNCKHMTLCL+CGKTMAENKGKCYDCGATVTRLIREYN
Sbjct: 1   MSLDLLLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATVTRLIREYN 60

Query: 61  VRASGSSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGLQGRQLTDALREKYKNRPWLL 120
           VRAS SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYK+GLQGRQLTDALREKYKNRPWLL
Sbjct: 61  VRASSSSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLL 120

Query: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
           EDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQSQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKESVGTSGRGRRKAAGDENEGNASDRG 240
           KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDK+S+G +GRGRRK   DENEGN SDRG
Sbjct: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDSIGATGRGRRKPTSDENEGNVSDRG 240

Query: 241 EEDEEEEAQRKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEK-GDDWEHEEIFTDDDE 300
           EEDEEEEA RKNRLGLNKKGGGDDDDEEG RGGDHDLDDDDIE  GDDWEHEEIFTDDDE
Sbjct: 241 EEDEEEEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIESIGDDWEHEEIFTDDDE 300

Query: 301 TTAPDREEREDLAPEVPAPPEIKQDEDDEDEDNEGEGGLSKSGKELKKLLRRTGGLNDSD 360
           TTAPDREEREDLAPEVPAPPEIKQDE+DEDE+NEGEGGLSKSGKELKKLLRR+GGLNDSD
Sbjct: 301 TTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRSGGLNDSD 360

Query: 361 G---EDDDDDDDVEEDTGGTPSLPSKQKDTVKEEAAASSPSKLTPSGSAKGTPSTAKTAK 420
           G   EDDDDDDD EE++GGTP  PSKQKD VKEEAAA+SPSK  PSGSAKGT STAKTAK
Sbjct: 361 GEEEEDDDDDDDAEEESGGTPVAPSKQKDAVKEEAAANSPSKPAPSGSAKGTSSTAKTAK 420

Query: 421 GKRKNGEDVKPSSAPPKKMKTETESKSTDEGVSTSKTTASKGAPASVKTEPASHSGPVTE 480
           GKRKNGEDVKPSSAPPKKMKTETESKSTDEG+STS++TASKGA ASVKTEPAS SGPVTE
Sbjct: 421 GKRKNGEDVKPSSAPPKKMKTETESKSTDEGMSTSRSTASKGAAASVKTEPASASGPVTE 480

Query: 481 EEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKP 539
           EEIRAVLRQRTPVTTQDLVAKFKARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKP
Sbjct: 481 EEIRAVLRQRTPVTTQDLVAKFKARLRSHEDKNAFAEILRRISRIQKTNGGPSYVVLRKP 540

[Close]

BLAST of CmUC07G128380 vs. TAIR 10
Match: AT4G12610.1 (transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors )

HSP 1 Score: 417.2 bits (1071), Expect = 2.1e-116
Identity = 265/405 (65.43%), Postives = 314/405 (77.53%), Query Frame = 0


Query: 146 LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAF 205
           +Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+NGPA F
Sbjct: 1   MQNKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPALF 60

Query: 206 GEVEKFDDKESVGTS---GRGRRKAA-GDENEGNASDRGEEDEEEEAQRKNRLGLNKKGG 265
           GEV+  ++KES GTS   GRGR+K++ GDE EGN SDRG+EDEEEEA RK+RLGLN+K  
Sbjct: 61  GEVD--NEKESGGTSGGGGRGRKKSSGGDEEEGNVSDRGDEDEEEEASRKSRLGLNRK-S 120

Query: 266 GDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPE 325
            DDDDEEG RGGD D+DDDDIEKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPE
Sbjct: 121 NDDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLLAPEIPAPPE 180

Query: 326 IKQDEDDEDEDNEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDTGGTPSLP 385
           IKQDEDDE E+ E EGGLSKSGKELKKLL +  GL++SD +DDDD DD EE   GT +  
Sbjct: 181 IKQDEDDE-ENEEEEGGLSKSGKELKKLLGKANGLDESDEDDDDDSDDEEETNYGTVT-N 240

Query: 386 SKQKDTVKEEAAASSPSKLTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTE 445
           SKQK+  KEE   ++P+K  PSG  +GTP  AK +KGKRK  +G+  KPSS+  KK+KTE
Sbjct: 241 SKQKEAAKEEPVDNAPAKPAPSGPPRGTP-PAKPSKGKRKLNDGDSKKPSSSVQKKVKTE 300

Query: 446 TESKSTDEGVSTSKTTASKGAPASVKTEPAS--------HSGPVTEEEIRAVLRQRTPVT 505
            + KS+ +    +  + S     +VK EPAS         +GPVTE+EIRAVL ++  VT
Sbjct: 301 NDPKSSLKEERANTVSKSNTPTKAVKAEPASAPASSSSAATGPVTEDEIRAVLMEKKQVT 360

Query: 506 TQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRK 536
           TQDLV++FKARL+T EDKNAFA ILR+IS+IQK  G  ++VVLR+
Sbjct: 361 TQDLVSRFKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLRE 399

[Close]

BLAST of CmUC07G128380 vs. TAIR 10
Match: AT4G12610.2 (transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors )

HSP 1 Score: 417.2 bits (1071), Expect = 2.1e-116
Identity = 265/405 (65.43%), Postives = 314/405 (77.53%), Query Frame = 0


Query: 146 LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAF 205
           +Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+NGPA F
Sbjct: 1   MQNKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPALF 60

Query: 206 GEVEKFDDKESVGTS---GRGRRKAA-GDENEGNASDRGEEDEEEEAQRKNRLGLNKKGG 265
           GEV+  ++KES GTS   GRGR+K++ GDE EGN SDRG+EDEEEEA RK+RLGLN+K  
Sbjct: 61  GEVD--NEKESGGTSGGGGRGRKKSSGGDEEEGNVSDRGDEDEEEEASRKSRLGLNRK-S 120

Query: 266 GDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPE 325
            DDDDEEG RGGD D+DDDDIEKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPE
Sbjct: 121 NDDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLLAPEIPAPPE 180

Query: 326 IKQDEDDEDEDNEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDTGGTPSLP 385
           IKQDEDDE E+ E EGGLSKSGKELKKLL +  GL++SD +DDDD DD EE   GT +  
Sbjct: 181 IKQDEDDE-ENEEEEGGLSKSGKELKKLLGKANGLDESDEDDDDDSDDEEETNYGTVT-N 240

Query: 386 SKQKDTVKEEAAASSPSKLTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTE 445
           SKQK+  KEE   ++P+K  PSG  +GTP  AK +KGKRK  +G+  KPSS+  KK+KTE
Sbjct: 241 SKQKEAAKEEPVDNAPAKPAPSGPPRGTP-PAKPSKGKRKLNDGDSKKPSSSVQKKVKTE 300

Query: 446 TESKSTDEGVSTSKTTASKGAPASVKTEPAS--------HSGPVTEEEIRAVLRQRTPVT 505
            + KS+ +    +  + S     +VK EPAS         +GPVTE+EIRAVL ++  VT
Sbjct: 301 NDPKSSLKEERANTVSKSNTPTKAVKAEPASAPASSSSAATGPVTEDEIRAVLMEKKQVT 360

Query: 506 TQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRK 536
           TQDLV++FKARL+T EDKNAFA ILR+IS+IQK  G  ++VVLR+
Sbjct: 361 TQDLVSRFKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLRE 399

The following BLAST results are available for this feature:

BLAST of CmUC07G128380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888042.1	1.2e-283	97.03	transcription initiation factor IIF subunit alpha isoform X1 [Benincasa hispida]	[more]
XP_004152016.1	1.1e-281	95.72	transcription initiation factor IIF subunit alpha isoform X1 [Cucumis sativus] >...	[more]
XP_016900419.1	1.2e-280	95.54	PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIF subunit alph...	[more]
XP_022931161.1	4.7e-272	93.51	transcription initiation factor IIF subunit alpha-like isoform X1 [Cucurbita mos...	[more]
KAG6606328.1	1.4e-271	93.32	Transcription initiation factor IIF subunit alpha, partial [Cucurbita argyrosper...	[more]

BLAST of CmUC07G128380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SU25	8.0e-182	67.45	Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana OX=370...	[more]
Q54WV4	1.3e-14	26.76	General transcription factor IIF subunit 1 OS=Dictyostelium discoideum OX=44689 ...	[more]
Q05913	4.6e-04	26.47	General transcription factor IIF subunit 1 OS=Drosophila melanogaster OX=7227 GN...	[more]

BLAST of CmUC07G128380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCA6	5.4e-282	95.72	Transcription initiation factor IIF subunit alpha OS=Cucumis sativus OX=3659 GN=...	[more]
A0A1S4DWR2	6.0e-281	95.54	Transcription initiation factor IIF subunit alpha OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1ESX1	2.3e-272	93.51	Transcription initiation factor IIF subunit alpha OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1E3E1	3.6e-270	92.76	Transcription initiation factor IIF subunit alpha OS=Momordica charantia OX=3673...	[more]
A0A6J1K1N5	1.4e-269	92.44	Transcription initiation factor IIF subunit alpha OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of CmUC07G128380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12610.1	2.1e-116	65.43	transcription activators;DNA binding;RNA polymerase II transcription factors;cat...	[more]
AT4G12610.2	2.1e-116	65.43	transcription activators;DNA binding;RNA polymerase II transcription factors;cat...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008851	Transcription initiation factor IIF, alpha subunit	PFAM	PF05793	TFIIF_alpha	coord: 48..534 e-value: 7.4E-142 score: 473.6
IPR008851	Transcription initiation factor IIF, alpha subunit	PANTHER	PTHR13011	TFIIF-ALPHA	coord: 1..534
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 456..535 e-value: 3.4E-20 score: 73.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 358..373
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 446..460
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 335..357
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 416..445
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 393..415
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..479
None	No IPR available	PANTHER	PTHR13011:SF3	BNAANNG16720D PROTEIN	coord: 1..534
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 467..534
IPR011039	Transcription Factor IIF, Rap30/Rap74, interaction	SUPERFAMILY	50916	Rap30/74 interaction domains	coord: 53..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC07G128380.1	CmUC07G128380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032968	positive regulation of transcription elongation from RNA polymerase II promoter
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005674	transcription factor TFIIF complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0016251	RNA polymerase II general transcription initiation factor activity
molecular_function	GO:0001096	TFIIF-class transcription factor complex binding
molecular_function	GO:0003743	translation initiation factor activity