CmUC07G127170 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC07G127170
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	beta-carotene isomerase D27, chloroplastic
Location	CmU531Chr07: 561741 .. 569125 (-)
RNA-Seq Expression	CmUC07G127170
Synteny	CmUC07G127170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAATTCATATATATATATATATATATTTCTCCTCCATTTCCCATCTCCATCCCCATAATTCAAATCACCTTACTTCTCTTGAAGTCCCTCTATCTTTAAATACAACCAAAAGTTTGTTGTAAGCCTAAAATCTCCCTCCCCTCCCTTCTCTGTCTCAAAACAAAGAAATGGATTTAAGAGTGATTGAAGCAAGGAGAGTGATTTTGCCAACAACAATGATGAGCAACAACAAAATGAAGAAGTTGAGAAGAAGAAGCATTCCTTGTGTGGCAGTGCTCACGAGACAAGCAGAGAGTGGAGTAATGGAAGAAACAAGAAAAACCAATACTGTTTACTCAGATAATTGGTTTGATAAAATAGCCATTGATCATCTGTCTCAGGCAGTACAAGCAACATCAGGTTTTTTTTTTTTTTTTTTTTTGGAAGGTTTGGGGGGGGGGGGGGGGGGGGGGTGGAAAGAAGGCTAATATAGAATATCATGATATGCAGGTTGGAAAAGCAAAAAGAGTGGATATGAGAGCTTGTTGGAAGTGACAACAATGGCATCAAGAAATTTCAACCATATCAAACAAAGAGAAGTTGTCATTCAAGCCCTTGGAAGGGCATTTCCAAAGCCAATCCTTTCTTTGGTAAACTTCATTCATTGCCATTTAACACCATTATGTTTCAATTATTACCATTCAATACGTTTACTTCTCTAATATAATAGGAATTGGGAGATTCAAATTCATCCACATATTAGTTGAGTTTTGCTAGTTGTTGGCCATTTAGTATTCTTTTAGCTTTCTAATCTTCCTTCTCGTTCATGATCTATGCATATATGTAAAATATCTATCACTAACCATATCATTAAAGATGCCAAAATGAGCTAAACTCAATTGACATAAATGTGAGCTAATGATTAAGAGATCTGTAGTTCAAATCTCCCACTTCTATAATACTAAAATATATATATATCATTAAACGATTATGAATGGTAATTTCAAACTTACATTAACTTTTTCTTTTGACTAATGACACAAATATTATTGTAACTAAGAGTCATTTAAAAATCACATATTTTTGGGTGGTCCTGAGTTATTTTATTTTATTTAATACAATAATTACATAAATGGAACTGGAAAATTAAACCTCCAAACTTCAAGAGGTGGCATCCTAAATTATTTATTTACTTATGATATTGTTCATTATTAAATAATTGATTTAGGGTTAGTAATGCATGATCATTTCATCCTTGATGAATTTTTATTTGGGCCCAAATGTTTCAACACTTGTCTTCCTCGTTTGGTCTCTCTTCTCCCATCAACATTAGGGAGAATATAGCTTAGGATTCATTGCCTAGGTTAGAACCAACTAAACAACTATACCCTTTTCTAATTTTTCTTTCAACTAATCATTGGGTTTACTAATTATTTGATTGTCACGTCATTATATGGAAATAGTATCATCAAATGCTCACACTTTTTATGTTAGTTTTATTTTAAGTAATTATTCGCTTAAACAAGTATTAAAATTGAACTTTTACTATTATTAATCCATCTCCAAATTTGGATTTTACTATTATACCTTCACCCCTCGCAACTTATATGTCCTTTAACATGTGGTGGTGAACAAAGTGCAGATAAAAGCATTGCTACCACCATCCAAATTCGCGAGGGAATATTTTGCTGTATTCACCACTGTCTTCTTTGCTTGGTTAGTTGGACCCTGCGAGGTAAGATGTAAATTTACCCAAAGCCCCTTTATTTCCTTGGTATGTTAATATCAATCCAAGGACCTAATTAGAAATTCACATACTTACATAAATACGCACGAAAAGGAGACTAACCTGAACATAACTCAATTGTTAAGGCATATGTAACTAACTAAAAGGTTAAAGGTTCGAAATTCCATTTCACTGATTGTAATCAAGAGAGAGGTAGTATGTATTGAAACATAGAGACTAACCTGAGCAGAACTGAACTATTAATGCATGTATCATTGATTGGGAGGTCAGAAATTCGAATCTTCTACCCTTAGATTGAATTCAACCGGGAGAGAACTTTTTTTCTTTCTTTTGTATTGGAAAACTATGCAAGTGCTCAGCACCACCCTTTAGAGCCAATGTGAAAGAGTTTGCTGAGAATAGATAGTATTTAAAGTTTAAACGGAGGACATTGAACAAACAAGGTCAGAATTAGGAAAGATTCACAAGGTTGAAAAGAGTGACATATGAGGAGGCATAATGGTGGACATCAAGAACTTCACCTTTCGCACTAAATTGAATATAATAATATGATTTTCAATGGCCAAGTTGATAAACCTGCAGTGATTGAGGCACTAGTCCCTTCTAGACTTGTCCTGTCCCTACAAATCAAAGAAAGGTTTTTGTGACGTAAGATAAATGAACCAATTCTTTGAGAAACTATCTTCTCTTCATGCTTACTCACTTTGGCCCTTTCCTTTTCTAGGCATTCCTTATGAATTCAGATTACACACAGCTGATATGTCTATAGATTGTTAGGGAGGGTGGGAGGGATTGAAAAAGCACACACATGGAAGGAGCAAGTCTTTTTTGATCACTAATTCGTAAAACTGACAAAAGTAACATATGACTTTTACAGGTGAAGGAATCAGAATTCGAAGGGAAAAGAGAAAGAAATGTGGTTCAAATCCACAAGTGCAGGTAATTCTTTCTCACATCAGAGTTCTATAATTAAGGCAATGTAATTCTTTCTCGCATCAGAGTAACATATGATTTTAACCGTTCATGGGGTCCCATTCTCACCTACCTGAGACACATCCATACCCACATAACTATCTGTCTATAATTATTACACCTCTTCTAAACTCTCAGTACTTAATCACATTAAGTGATGTCCATTATTCACATCATTGAAAATTTGATATTATCATAGTAAAAAATAACATTCAGCAAATCTATATTGCCCCTAAACATATCCCATTTATTTGCAGGTTCCTAGAGCAAACTAACTGTGCTGGAATGTGCATTAATCTATGCAAGTTTCCATGTCAGGATTTCATAAAGGATTCTTTGGGAATGCCAGTCAGCATGGTCCCCAGTAAGTCTCCTCACTAAGCTACAGAATCACCAAACAACTGCAGCAACCATATATTGTTTTCCCACAAGAAAAACAAGTTTCAACTTTTCAAAAAAAAAGAAAGAAAGAAAGTTTTAAATTCACATACACTGCAGCACAAGGCAATTCTGGACACTAATTTAAACTTCCAAACTAAACTGAAAGCCATAATTTTTTGTTCTCATGTTCATAGTGTTTAGAGTTAGTTTGCACACACCGCTACAACAGCCCTACAACATTTGATTGCCAAGAAAAATCATAAAAAATTAAATCTTAACTAGCTACAGGGCTTGAGCTCATTCCTTCTATGCTTTTTATTATTTACATTGGCTCTTATTGCCTACTAAATCAATCTATGGTGGTTAACTCAAGTCCATTATAAAAATATCATATTCACATATAGAGGAATATTAGAATTAAATTATTTCAGCTCAATCTATATGGTCTAAATGTGAGGACACTAAATAAAGTAACTCAGCTATATTGCAATGATCAATGACTGGTAGATCCATGAGCAAAAGTGAAATTACTATTAAAGCAACATTCCCAGCACCAAATGGTGGAACGGATCATGTTTGTCAATGTGATTGGAGGGTCCCATGCACGAACCATTTTGGGTACAAAAGAACTGCAGCTAGGCCCCATCCAAGCTAAGTGGGATTTCAAACCTGCAGCTTAATTTTGCAATATGGTTACCATCCAAGAATTAAAAGCTGAATTTCCATCGTTAATCAATCATCAAGCTGAATTTCCCACTGAGCCAATCATCGCTCTTGCCCATGATATACATTAATCATCACAAGTGAAATGCAACCAAGCAGAAGCATTAGTATTAGGATGTTAATTGTGCACAATGATGTAACTACTAGCTGGGAACCATTAGTATTCATGTCAAGGACCAAGAAACACATCAATATGCAACGGGAGTTTGGGAGCAAGAGAGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAGCTTTATAATATGATTCAAATAACTGTTTTTCTTTGCAGATTTTGATGACATGAGCTGTGAGATGATATTTGGAAAGGATCCACCAGCTCCAATCGATGATCCAGCGCTTAAGCAACCTTGTTACAAACTATGTATTAGCCTTAACACAAGTCTTCTTCTTGCTTTTCTTATTATTACCTTTTACTTCTTTACCTGTGAGTGGAGAAGTCAAATATATTCAAATAATTCACTGGGAAAGGTAGCAGGACTGCAGCAGGTCCAAACTAGATTTTTAGGGGAATGGTAATATAAATTAAAAATGACTCTAATCTTATTTGTTTACTTTTTGCAGGCAAAACGAAAGAAAAACATACGACAAACTGCTTTATTTAGAGCAAAGGGACGCTGAAAGAATTTTTTTGGATGAGATCCATTTTATCTCCCAATTGTTTTTTTACCAATATTTTCTGGATTACAGGAGAACCTCTTTTCTTCTTCCAAGATGAACAGATAGTTGTACTGTTTAGGAATCAGAGCAAAAATAACTTTGCAGGAATCTGGCTTTCTAGTCATTATATTGGTTCAAAGATGAAATCTACCATACTGTCAGATAACATAAATACAATTAAAAGCATGTCTATAGGAAAAGGGTTAAGATGCAGAAATTGCAATCGATTATCCACGTGAAATGCTAAAATGGACAATATATTCCATAGTGCCTTGCTAGAAAGAAAACCATCCTTTGCCGGAAAACCAGCGAAGTGAAACATTTTTTCGAACAATTAATATTGCTTCAGCATGTTACTTGTGAATTTTATAACAAAGCTATGTAATTTAATAGGAAATAAATTTTTTTGACTAAGTTGAAATAATATCCCAAATACACATTAATAGATCGGTAACCTATAACTGTTCTCTTTACTGTTTTGCTATTATTCAGATCTACAGATTATAAAGATTATGACAGCAGAAGACACTAAACCAACGGTATTATTGTTCTAATTTTCACAAAAGGACGCTCTCTGTTAACTCTATGAACATCATCACAACAATTATCAGTTATTCAGCTCTCATTAGGAAACTCAACCCTCAGTATTTGCGAGACTGTCAATCCTGATACAACAAAGCATGATTCATTTTGAAAACCTCAATTAACTGGCAGTAACAAATAATATTTTATGATAGCCTACCTCCATCTCGCAATATAAATTGATCTAGTGAATTTAGAGAGGTTGTCCACGTGAAACAATTATAATGGTTGTTTGCAACAACCTCAATGACTTCGAAGCGACGGAAAGATGCAAACATGGATATGATTAGGCTAATTTGATCCACAAATTACAAGGACAAGATTGATGATTAATTCCAATTGCTGATACACTAATGATCATTCAGATATTCAAAGAAATTAGTACTTTTAATGATTATTTATTTTGTTCTCTTTGATAAGGCTTAAAACTGGAATTATACGTATCATTTTCCTATTTAGAAAATGGTAAATTTCTTTATTAAAGGTAAGCATTTTGACTAGGGATTTATTTGTGGGGATTAAGGTCAGCAAATGTGGACCAAGATTGTTTCCCACTTCATTTTGTTTCCAAGTAACCAGGCTAAGATTCTTGTGATGTCTTGTCTCATTATCAGGGCGACTAAGTACCCAAACCCACTGTGAACCTATAAAAAATTCAGCAACAAGTTTCTTTAATAGGAAGGTTAAATTTGCAACCAATAAGTGGATGAGGAATATATCTGAACAGCCTGGGACATCAAGTTGAAACCATGCTAATCAGTACTGGTCAGGCTATTTGGAAAACTTGCACAAAGCTATTCTAAGAATGCGGCTTTACATCAGAATTAGAACTTCTTTGAACAACAAAACAGCATTTCCCCATAAGAAGCATATTCAGAAATGCAGTCATGATTTCAATGTAGGGCAAAGAAAAGTTTGAAATGAGGTTTCATTGAAACAGAAGGAAGCTCTTTTATTAGATAAAATTGCAATCTCCATAATATTGCAAAGATTGTTCCTTAGAAAATAAGGATTGTTCGGTTAGGACTCCCTTGTCCCCCCTTCTCATTATCTTCATCGCACCTCTGTTTCTTCCATTGTCATTAATGAATCCATCTTCTATCCTCCAACTTCTCCCTTAATATTCTAATCACAAAATGCATGGGAAGAGGAAAGAAGGGAAAAAAAAAGAAGGAAAAAGAAGTAGAAGTCATGTGCTTCCTATGAAAAGGCACTTCGGGACCTTTTCACTTTTAGTCGACGGGTCAATGTCCTTACTTCAGTAAATTTTCCAGAGTCTGCCTTCTACCTTAAATTGTTCTCTATCTTTATCTTCTTCTCATGGCATATTTGCCACATATAAAATTGAACTTGAACAGGTGTGCATAAAATTATCACGTTTATGGGTAAAGAAATCTTGAAAACATTTAGAACATCCACCACGAACCAGAGATGAAATAATACAAAACCAAGATAAAGAGCAGTTTACAACGTAATATCTTGTAACCGAAGAGGCTGGAGAAAGATTCTTGGCAGTGGTAGCAGTAGGCTTGCCTTTTTTTTAGAAGAAAAATAAATTTCATTGATGAGTAAAATAATAGGAGCTCCAAACACCTAGTGGTGGATTACATGACAACTTTCCAATTGGAAAGCAAATAAGAAAGACTAAAATCAGGGAAAGAATGATAACGTTTACACCAATAAGAAGCATGAAAAAGAATCACAATTACTTTACCAGGTAGTAGTAGTCTTGTCCTCGCAATGACATTACCAGGTTCTTATTAGCCAGCCCAAAACTTCGGCCTGTGTCTCTTCCAGGTTGTTATAGGCCCTGAAGAAGAAAATCGGGATTTTGGCTGTCCTATATCAGGCAGAGAAGCCCAAATAAATCAGTTTTATTAACTGAAATGCCCATTGAATGGCCACTTTTTCTATCTTTTTACATCAGCGAGGTGCCAAATCTTCAACTCCTAGGTTTCAGGGATCTTGAAAGTTATTAAGTCGATTTATCAATAGATCAACAACTTGGCAATTCCAATCCCACATGGCCATCTTTCCAATATTTAACCGACTACTTTCTTTAAAAAATTAAATTCAAGTCGGACAACAAAACACATAACCAGCTTCTACTCCATAATTATTAAGAAAGTTAGTTATGATGTAGTCTCTCTGTTTGTTTGTTTGTTTGTTTTTTCTTTCGGTTCAACAATATGCAAGGGTGGAAATGAAGATTCAAACTTTTGACCTTTTGGTGGATGATATAAGTTTTCACTAGTTCATGCCTATTGGTTTTGCTTCTATGATATAAATCCTCCCACTTATATTAATCATGTCAAATTAG

mRNA sequence

ATAATTCATATATATATATATATATATTTCTCCTCCATTTCCCATCTCCATCCCCATAATTCAAATCACCTTACTTCTCTTGAAGTCCCTCTATCTTTAAATACAACCAAAAGTTTGTTGTAAGCCTAAAATCTCCCTCCCCTCCCTTCTCTGTCTCAAAACAAAGAAATGGATTTAAGAGTGATTGAAGCAAGGAGAGTGATTTTGCCAACAACAATGATGAGCAACAACAAAATGAAGAAGTTGAGAAGAAGAAGCATTCCTTGTGTGGCAGTGCTCACGAGACAAGCAGAGAGTGGAGTAATGGAAGAAACAAGAAAAACCAATACTGTTTACTCAGATAATTGGTTTGATAAAATAGCCATTGATCATCTGTCTCAGGCAGTACAAGCAACATCAGGTTGGAAAAGCAAAAAGAGTGGATATGAGAGCTTGTTGGAAGTGACAACAATGGCATCAAGAAATTTCAACCATATCAAACAAAGAGAAGTTGTCATTCAAGCCCTTGGAAGGGCATTTCCAAAGCCAATCCTTTCTTTGATAAAAGCATTGCTACCACCATCCAAATTCGCGAGGGAATATTTTGCTGTATTCACCACTGTCTTCTTTGCTTGGTTAGTTGGACCCTGCGAGGTGAAGGAATCAGAATTCGAAGGGAAAAGAGAAAGAAATGTGGTTCAAATCCACAAGTGCAGGTTCCTAGAGCAAACTAACTGTGCTGGAATGTGCATTAATCTATGCAAGTTTCCATGTCAGGATTTCATAAAGGATTCTTTGGGAATGCCAGTCAGCATGGTCCCCAATTTTGATGACATGAGCTGTGAGATGATATTTGGAAAGGATCCACCAGCTCCAATCGATGATCCAGCGCTTAAGCAACCTTGTTACAAACTATGTATTAGCCTTAACACAAGTCTTCTTCTTGCTTTTCTTATTATTACCTTTTACTTCTTTACCTGTGAGTGGAGAAGTCAAATATATTCAAATAATTCACTGGGAAAGGTAGCAGGACTGCAGCAGGCAAAACGAAAGAAAAACATACGACAAACTGCTTTATTTAGAGCAAAGGGACGCTGAAAGAATTTTTTTGGATGAGATCCATTTTATCTCCCAATTGTTTTTTTACCAATATTTTCTGGATTACAGGAGAACCTCTTTTCTTCTTCCAAGATGAACAGATAGTTGTACTGTTTAGGAATCAGAGCAAAAATAACTTTGCAGGAATCTGGCTTTCTAGTCATTATATTGGTTCAAAGATGAAATCTACCATACTGTCAGATAACATAAATACAATTAAAAGCATGTCTATAGGAAAAGGGTTAAGATGCAGAAATTGCAATCGATTATCCACGTGAAATGCTAAAATGGACAATATATTCCATAGTGCCTTGCTAGAAAGAAAACCATCCTTTGCCGGAAAACCAGCGAAGTGAAACATTTTTTCGAACAATTAATATTGCTTCAGCATGTTACTTGTGAATTTTATAACAAAGCTATGTAATTTAATAGGAAATAAATTTTTTTGACTAAGTTGAAATAATATCCCAAATACACATTAATAGATCGGTAACCTATAACTGTTCTCTTTACTGTTTTGCTATTATTCAGATCTACAGATTATAAAGATTATGACAGCAGAAGACACTAAACCAACGGTATTATTGTTCTAATTTTCACAAAAGGACGCTCTCTGTTAACTCTATGAACATCATCACAACAATTATCAGTTATTCAGCTCTCATTAGGAAACTCAACCCTCAGTATTTGCGAGACTGTCAATCCTGATACAACAAAGCATGATTCATTTTGAAAACCTCAATTAACTGGCAGTAACAAATAATATTTTATGATAGCCTACCTCCATCTCGCAATATAAATTGATCTAGTGAATTTAGAGAGGTTGTCCACGTGAAACAATTATAATGGTTGTTTGCAACAACCTCAATGACTTCGAAGCGACGGAAAGATGCAAACATGGATATGATTAGGCTAATTTGATCCACAAATTACAAGGACAAGATTGATGATTAATTCCAATTGCTGATACACTAATGATCATTCAGATATTCAAAGAAATTAGTACTTTTAATGATTATTTATTTTGTTCTCTTTGATAAGGCTTAAAACTGGAATTATACGTATCATTTTCCTATTTAGAAAATGGTAAATTTCTTTATTAAAGGTAAGCATTTTGACTAGGGATTTATTTGTGGGGATTAAGGTCAGCAAATGTGGACCAAGATTGTTTCCCACTTCATTTTGTTTCCAAGTAACCAGGCTAAGATTCTTGTGATGTCTTGTCTCATTATCAGGGCGACTAAGTACCCAAACCCACTGTGAACCTATAAAAAATTCAGCAACAAGTTTCTTTAATAGGAAGGTTAAATTTGCAACCAATAAGTGGATGAGGAATATATCTGAACAGCCTGGGACATCAAGTTGAAACCATGCTAATCAGTACTGGTCAGGCTATTTGGAAAACTTGCACAAAGCTATTCTAAGAATGCGGCTTTACATCAGAATTAGAACTTCTTTGAACAACAAAACAGCATTTCCCCATAAGAAGCATATTCAGAAATGCAGTCATGATTTCAATGTAGGGCAAAGAAAAGTTTGAAATGAGGTTTCATTGAAACAGAAGGAAGCTCTTTTATTAGATAAAATTGCAATCTCCATAATATTGCAAAGATTGTTCCTTAGAAAATAAGGATTGTTCGGTTAGGACTCCCTTGTCCCCCCTTCTCATTATCTTCATCGCACCTCTGTTTCTTCCATTGTCATTAATGAATCCATCTTCTATCCTCCAACTTCTCCCTTAATATTCTAATCACAAAATGCATGGGAAGAGGAAAGAAGGGAAAAAAAAAGAAGGAAAAAGAAGTAGAAGTCATGTGCTTCCTATGAAAAGGCACTTCGGGACCTTTTCACTTTTAGTCGACGGGTCAATGTCCTTACTTCAGTAAATTTTCCAGAGTCTGCCTTCTACCTTAAATTGTTCTCTATCTTTATCTTCTTCTCATGGCATATTTGCCACATATAAAATTGAACTTGAACAGGTGTGCATAAAATTATCACGTTTATGGGTAAAGAAATCTTGAAAACATTTAGAACATCCACCACGAACCAGAGATGAAATAATACAAAACCAAGATAAAGAGCAGTTTACAACGTAATATCTTGTAACCGAAGAGGCTGGAGAAAGATTCTTGGCAGTGGTAGCAGTAGGCTTGCCTTTTTTTTAGAAGAAAAATAAATTTCATTGATGAGTAAAATAATAGGAGCTCCAAACACCTAGTGGTGGATTACATGACAACTTTCCAATTGGAAAGCAAATAAGAAAGACTAAAATCAGGGAAAGAATGATAACGTTTACACCAATAAGAAGCATGAAAAAGAATCACAATTACTTTACCAGGTAGTAGTAGTCTTGTCCTCGCAATGACATTACCAGGTTCTTATTAGCCAGCCCAAAACTTCGGCCTGTGTCTCTTCCAGGTTGTTATAGGCCCTGAAGAAGAAAATCGGGATTTTGGCTGTCCTATATCAGGCAGAGAAGCCCAAATAAATCAGTTTTATTAACTGAAATGCCCATTGAATGGCCACTTTTTCTATCTTTTTACATCAGCGAGGTGCCAAATCTTCAACTCCTAGGTTTCAGGGATCTTGAAAGTTATTAAGTCGATTTATCAATAGATCAACAACTTGGCAATTCCAATCCCACATGGCCATCTTTCCAATATTTAACCGACTACTTTCTTTAAAAAATTAAATTCAAGTCGGACAACAAAACACATAACCAGCTTCTACTCCATAATTATTAAGAAAGTTAGTTATGATGTAGTCTCTCTGTTTGTTTGTTTGTTTGTTTTTTCTTTCGGTTCAACAATATGCAAGGGTGGAAATGAAGATTCAAACTTTTGACCTTTTGGTGGATGATATAAGTTTTCACTAGTTCATGCCTATTGGTTTTGCTTCTATGATATAAATCCTCCCACTTATATTAATCATGTCAAATTAG

Coding sequence (CDS)

ATGGATTTAAGAGTGATTGAAGCAAGGAGAGTGATTTTGCCAACAACAATGATGAGCAACAACAAAATGAAGAAGTTGAGAAGAAGAAGCATTCCTTGTGTGGCAGTGCTCACGAGACAAGCAGAGAGTGGAGTAATGGAAGAAACAAGAAAAACCAATACTGTTTACTCAGATAATTGGTTTGATAAAATAGCCATTGATCATCTGTCTCAGGCAGTACAAGCAACATCAGGTTGGAAAAGCAAAAAGAGTGGATATGAGAGCTTGTTGGAAGTGACAACAATGGCATCAAGAAATTTCAACCATATCAAACAAAGAGAAGTTGTCATTCAAGCCCTTGGAAGGGCATTTCCAAAGCCAATCCTTTCTTTGATAAAAGCATTGCTACCACCATCCAAATTCGCGAGGGAATATTTTGCTGTATTCACCACTGTCTTCTTTGCTTGGTTAGTTGGACCCTGCGAGGTGAAGGAATCAGAATTCGAAGGGAAAAGAGAAAGAAATGTGGTTCAAATCCACAAGTGCAGGTTCCTAGAGCAAACTAACTGTGCTGGAATGTGCATTAATCTATGCAAGTTTCCATGTCAGGATTTCATAAAGGATTCTTTGGGAATGCCAGTCAGCATGGTCCCCAATTTTGATGACATGAGCTGTGAGATGATATTTGGAAAGGATCCACCAGCTCCAATCGATGATCCAGCGCTTAAGCAACCTTGTTACAAACTATGTATTAGCCTTAACACAAGTCTTCTTCTTGCTTTTCTTATTATTACCTTTTACTTCTTTACCTGTGAGTGGAGAAGTCAAATATATTCAAATAATTCACTGGGAAAGGTAGCAGGACTGCAGCAGGCAAAACGAAAGAAAAACATACGACAAACTGCTTTATTTAGAGCAAAGGGACGCTGA

Protein sequence

MDLRVIEARRVILPTTMMSNNKMKKLRRRSIPCVAVLTRQAESGVMEETRKTNTVYSDNWFDKIAIDHLSQAVQATSGWKSKKSGYESLLEVTTMASRNFNHIKQREVVIQALGRAFPKPILSLIKALLPPSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKRERNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCYKLCISLNTSLLLAFLIITFYFFTCEWRSQIYSNNSLGKVAGLQQAKRKKNIRQTALFRAKGR

Homology

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BLAST of CmUC07G127170 vs. NCBI nr
Match: XP_038888066.1 (beta-carotene isomerase D27, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 506.5 bits (1303), Expect = 1.6e-139
Identity = 249/269 (92.57%), Postives = 260/269 (96.65%), Query Frame = 0


Query: 1   MDLRVIEARRVILPTTMMSNNKMKKLRRRSIPCVAVLTRQAESGVMEETRKTNTVYSDNW 60
           MDLRVI+ RRVILP TMM+NNKMKKL R+S+PCVAVLTR AESGV+EETRKTNTVY+DNW
Sbjct: 1   MDLRVIQERRVILP-TMMNNNKMKKLGRKSLPCVAVLTRPAESGVIEETRKTNTVYTDNW 60

Query: 61  FDKIAIDHLSQAVQATSGWKSKKSGYESLLEVTTMASRNFNHIKQREVVIQALGRAFPKP 120
           FDKIAI HLSQAVQATSGW+SKKSGYESL+EVTTMASRNFN IKQREVVIQALGRAFPKP
Sbjct: 61  FDKIAIHHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNQIKQREVVIQALGRAFPKP 120

Query: 121 ILSLIKALLPPSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKRERNVVQIHKCRFLEQ 180
           ILSLIKAL+P SKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKRE+NVVQIHKCRFLEQ
Sbjct: 121 ILSLIKALVPQSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKREKNVVQIHKCRFLEQ 180

Query: 181 TNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCY 240
           TNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCY
Sbjct: 181 TNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCY 240

Query: 241 KLCISLNTSLLLAFLIITFYFFTCEWRSQ 270
           KLCI+LNT LLL FLIITFYFFTCEWRSQ
Sbjct: 241 KLCINLNTILLLPFLIITFYFFTCEWRSQ 268

[Close]

BLAST of CmUC07G127170 vs. NCBI nr
Match: XP_038888067.1 (beta-carotene isomerase D27, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 462.2 bits (1188), Expect = 3.4e-126
Identity = 227/245 (92.65%), Postives = 237/245 (96.73%), Query Frame = 0


Query: 1   MDLRVIEARRVILPTTMMSNNKMKKLRRRSIPCVAVLTRQAESGVMEETRKTNTVYSDNW 60
           MDLRVI+ RRVILP TMM+NNKMKKL R+S+PCVAVLTR AESGV+EETRKTNTVY+DNW
Sbjct: 1   MDLRVIQERRVILP-TMMNNNKMKKLGRKSLPCVAVLTRPAESGVIEETRKTNTVYTDNW 60

Query: 61  FDKIAIDHLSQAVQATSGWKSKKSGYESLLEVTTMASRNFNHIKQREVVIQALGRAFPKP 120
           FDKIAI HLSQAVQATSGW+SKKSGYESL+EVTTMASRNFN IKQREVVIQALGRAFPKP
Sbjct: 61  FDKIAIHHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNQIKQREVVIQALGRAFPKP 120

Query: 121 ILSLIKALLPPSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKRERNVVQIHKCRFLEQ 180
           ILSLIKAL+P SKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKRE+NVVQIHKCRFLEQ
Sbjct: 121 ILSLIKALVPQSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKREKNVVQIHKCRFLEQ 180

Query: 181 TNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCY 240
           TNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCY
Sbjct: 181 TNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCY 240

Query: 241 KLCIS 246
           KLC S
Sbjct: 241 KLCKS 244

[Close]

BLAST of CmUC07G127170 vs. NCBI nr
Match: KAA0057411.1 (beta-carotene isomerase D27 [Cucumis melo var. makuwa] >TYK30110.1 beta-carotene isomerase D27 [Cucumis melo var. makuwa])

HSP 1 Score: 439.1 bits (1128), Expect = 3.1e-119
Identity = 217/243 (89.30%), Postives = 229/243 (94.24%), Query Frame = 0


Query: 1   MDLRVIEARRVILPTTMMSNNKMKKLRRRSIPCVAVLTRQAESGVMEETRKTNTVYSDNW 60
           MDLRVI+   VILP TMM+NNKM KLRR++I CV VLTR AE  V+EETRKT TVY+DNW
Sbjct: 1   MDLRVIQDTTVILP-TMMNNNKM-KLRRKNILCVGVLTRSAEGEVIEETRKTKTVYTDNW 60

Query: 61  FDKIAIDHLSQAVQATSGWKSKKSGYESLLEVTTMASRNFNHIKQREVVIQALGRAFPKP 120
           FDKIAIDHLSQAVQATSGW+SKKSGYESLLEVTTMASRNFNHIKQ+EVVIQALGRAFPKP
Sbjct: 61  FDKIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKP 120

Query: 121 ILSLIKALLPPSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKRERNVVQIHKCRFLEQ 180
           ILSLIKALLP SKFAREYFA FTTVFFAWLVGPCEVKESEF+GKRE+NVVQIHKCRFLEQ
Sbjct: 121 ILSLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQ 180

Query: 181 TNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCY 240
           TNCAGMCINLCKFPCQDFIKDSLGMPV+MVPNFDDMSCEMIFGK+PPA IDDPALKQPCY
Sbjct: 181 TNCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCY 240

Query: 241 KLC 244
           KLC
Sbjct: 241 KLC 241

[Close]

BLAST of CmUC07G127170 vs. NCBI nr
Match: XP_004145371.1 (beta-carotene isomerase D27, chloroplastic [Cucumis sativus] >KGN61698.1 hypothetical protein Csa_006159 [Cucumis sativus])

HSP 1 Score: 435.6 bits (1119), Expect = 3.4e-118
Identity = 215/243 (88.48%), Postives = 228/243 (93.83%), Query Frame = 0


Query: 1   MDLRVIEARRVILPTTMMSNNKMKKLRRRSIPCVAVLTRQAESGVMEETRKTNTVYSDNW 60
           MDLRVI+  RVILP TMM+NNKM KLRR+SI C  VLTR AE  ++EETRKTNTVY+DNW
Sbjct: 1   MDLRVIQDTRVILP-TMMNNNKM-KLRRKSILCFGVLTRPAEGELIEETRKTNTVYTDNW 60

Query: 61  FDKIAIDHLSQAVQATSGWKSKKSGYESLLEVTTMASRNFNHIKQREVVIQALGRAFPKP 120
           FDKIAIDHLSQAVQATSGW+SKKSGYESL+EVTTMASRNFNHIKQ+EVVIQALG AFPKP
Sbjct: 61  FDKIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKP 120

Query: 121 ILSLIKALLPPSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKRERNVVQIHKCRFLEQ 180
           ILSLIKALLP SK AREYFA FTTVFFAWLVGPCEVKESEF+GKRE+NVVQIHKCRFLEQ
Sbjct: 121 ILSLIKALLPQSKLAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQ 180

Query: 181 TNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCY 240
           TNCAGMCINLCKFPCQDFIKDSLGMPV+MVPNFDDMSCEMIFGK+PPA IDDPALKQPCY
Sbjct: 181 TNCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCY 240

Query: 241 KLC 244
           KLC
Sbjct: 241 KLC 241

[Close]

BLAST of CmUC07G127170 vs. NCBI nr
Match: XP_008449360.1 (PREDICTED: LOW QUALITY PROTEIN: beta-carotene isomerase D27, chloroplastic [Cucumis melo])

HSP 1 Score: 433.3 bits (1113), Expect = 1.7e-117
Identity = 215/243 (88.48%), Postives = 227/243 (93.42%), Query Frame = 0


Query: 1   MDLRVIEARRVILPTTMMSNNKMKKLRRRSIPCVAVLTRQAESGVMEETRKTNTVYSDNW 60
           MDLRVI+   VILP TMM+NNKM KLRR++   V VLTR AE  V+EETRKT TVY+DNW
Sbjct: 1   MDLRVIQDTTVILP-TMMNNNKM-KLRRKTFFXVGVLTRSAEGEVIEETRKTKTVYTDNW 60

Query: 61  FDKIAIDHLSQAVQATSGWKSKKSGYESLLEVTTMASRNFNHIKQREVVIQALGRAFPKP 120
           FDKIAIDHLSQAVQATSGW+SKKSGYESLLEVTTMASRNFNHIKQ+EVVIQALGRAFPKP
Sbjct: 61  FDKIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKP 120

Query: 121 ILSLIKALLPPSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKRERNVVQIHKCRFLEQ 180
           ILSLIKALLP SKFAREYFA FTTVFFAWLVGPCEVKESEF+GKRE+NVVQIHKCRFLEQ
Sbjct: 121 ILSLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQ 180

Query: 181 TNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCY 240
           TNCAGMCINLCKFPCQDFIKDSLGMPV+MVPNFDDMSCEMIFGK+PPA IDDPALKQPCY
Sbjct: 181 TNCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCY 240

Query: 241 KLC 244
           KLC
Sbjct: 241 KLC 241

[Close]

BLAST of CmUC07G127170 vs. ExPASy Swiss-Prot
Match: R4HZ96 (Beta-carotene isomerase D27, chloroplastic OS=Medicago truncatula OX=3880 GN=D27 PE=1 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 9.0e-82
Identity = 146/243 (60.08%), Postives = 187/243 (76.95%), Query Frame = 0


Query: 1   MDLRVIEARRVILPTTMMSNNKMKKLRRRSIPCVAVLTRQAESGVMEETRKTNTVYSDNW 60
           MD ++I     + PT  ++  K  +L+ +    V VL R  +  + EET +   VY DNW
Sbjct: 1   MDSKMIAHNMSLTPT--LAQWKKLRLKPKHTFVVGVLARPTDD-ISEETLRKTNVYKDNW 60

Query: 61  FDKIAIDHLSQAVQATSGWKSKKSGYESLLEVTTMASRNFNHIKQREVVIQALGRAFPKP 120
           FDK+AI+HLS++VQA +G  + KSG++SL+E  T+AS+ FN  +Q+ +++ AL RAFPKP
Sbjct: 61  FDKLAINHLSKSVQAATGISNNKSGFDSLVEAATVASQKFNTTQQQGIILDALDRAFPKP 120

Query: 121 ILSLIKALLPPSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKRERNVVQIHKCRFLEQ 180
           ILS+I+ ++PPSK AREYFAVFTT+FFAWL+GP EV+ESE  G+RE+N+V I KCRFLE+
Sbjct: 121 ILSVIRRVMPPSKLAREYFAVFTTIFFAWLLGPSEVRESEINGRREKNIVHIKKCRFLEE 180

Query: 181 TNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCY 240
           TNC GMCINLCK P Q FIKDS GMPV+MVPNFDDMSCEMIFG++PPA  DDPALKQPCY
Sbjct: 181 TNCVGMCINLCKMPSQLFIKDSFGMPVNMVPNFDDMSCEMIFGQEPPASTDDPALKQPCY 240

Query: 241 KLC 244
           KLC
Sbjct: 241 KLC 240

[Close]

BLAST of CmUC07G127170 vs. ExPASy Swiss-Prot
Match: C7AU21 (Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=D27 PE=1 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 8.8e-69
Identity = 129/214 (60.28%), Postives = 155/214 (72.43%), Query Frame = 0


Query: 30  SIPCVAVLTRQAESGVMEETRKT--NTVYSDNWFDKIAIDHLSQAVQATSGWKSKKSGYE 89
           S P     T    S V  ET      TVY D+WFDK+AI +LS+ +Q  SG K++K GYE
Sbjct: 52  SAPAKKTETAAMMSTVQTETAAAPPATVYRDSWFDKLAIGYLSRNLQEASGLKNEKDGYE 111

Query: 90  SLLEVTTMASRNFNHIKQREVVIQALGRAFPKPILSLIKALLPPSKFAREYFAVFTTVFF 149
           SL++     SR F+  KQ E+V QAL RA P  IL++IK ++PPS+F+REYFA FTT+FF
Sbjct: 112 SLIDAALAISRIFSLDKQSEIVTQALERALPSYILTMIKVMMPPSRFSREYFAAFTTIFF 171

Query: 150 AWLVGPCEVKESEFEGKRERNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPV 209
            WLVGPCEV ESE EG++E+NVV I KCRFLE TNC GMC NLCK PCQ FI+DSLGM V
Sbjct: 172 PWLVGPCEVMESEVEGRKEKNVVYIPKCRFLESTNCVGMCTNLCKIPCQKFIQDSLGMKV 231

Query: 210 SMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCYK 242
            M PNF+DMSCEMIFG+ PP   DDPALKQPC++
Sbjct: 232 YMSPNFEDMSCEMIFGQQPPE--DDPALKQPCFR 263

[Close]

BLAST of CmUC07G127170 vs. ExPASy Swiss-Prot
Match: Q7XA78 (Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=D27 PE=1 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 4.5e-57
Identity = 115/256 (44.92%), Postives = 167/256 (65.23%), Query Frame = 0


Query: 1   MDLRVIEARRVILPTTMMSNNKMKKLRRRSIPCVAVLTRQAESGVMEETRKT-------- 60
           M+ ++  ++  I   T   N+    L RRS     + ++   SG ++  ++T        
Sbjct: 1   MNTKLSLSQTKIFTFTTWFNDTRSGLDRRSSISPTLCSKPVYSGKLKAAKETARIETSNT 60

Query: 61  -NTVYSDNWFDKIAIDHLSQAVQATSG--WKSKKSGYESLLEVTTMASRNFNHIKQREVV 120
            N    D++F KIAI++LS+ +Q  +G    SK + Y+ L++  T  SRNF+  +Q E V
Sbjct: 61  KNASIEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTATRVSRNFDTKQQHEFV 120

Query: 121 IQALGRAFPKPILSLIKALLPPSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKRERNV 180
           + +L RA P  I SLIK   PPSK +RE FA+FTT+ FAWLVGP EV+E+E  G++E++V
Sbjct: 121 LSSLDRALPTVISSLIKMAFPPSKVSRELFALFTTISFAWLVGPSEVRETEVNGRKEKSV 180

Query: 181 VQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAP 240
           V I KCRFLEQ+NC GMC ++CK P Q FIK+SLGMP+ M P+F+D+SC+M+FG++PP  
Sbjct: 181 VYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPDFNDLSCKMMFGREPPEI 240

Query: 241 IDDPALKQPCYKLCIS 246
            DDPA+KQPC++ C S
Sbjct: 241 EDDPAMKQPCFEFCKS 256

[Close]

BLAST of CmUC07G127170 vs. ExPASy TrEMBL
Match: A0A5D3E3G1 (Beta-carotene isomerase D27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00920 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 1.5e-119
Identity = 217/243 (89.30%), Postives = 229/243 (94.24%), Query Frame = 0


Query: 1   MDLRVIEARRVILPTTMMSNNKMKKLRRRSIPCVAVLTRQAESGVMEETRKTNTVYSDNW 60
           MDLRVI+   VILP TMM+NNKM KLRR++I CV VLTR AE  V+EETRKT TVY+DNW
Sbjct: 1   MDLRVIQDTTVILP-TMMNNNKM-KLRRKNILCVGVLTRSAEGEVIEETRKTKTVYTDNW 60

Query: 61  FDKIAIDHLSQAVQATSGWKSKKSGYESLLEVTTMASRNFNHIKQREVVIQALGRAFPKP 120
           FDKIAIDHLSQAVQATSGW+SKKSGYESLLEVTTMASRNFNHIKQ+EVVIQALGRAFPKP
Sbjct: 61  FDKIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKP 120

Query: 121 ILSLIKALLPPSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKRERNVVQIHKCRFLEQ 180
           ILSLIKALLP SKFAREYFA FTTVFFAWLVGPCEVKESEF+GKRE+NVVQIHKCRFLEQ
Sbjct: 121 ILSLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQ 180

Query: 181 TNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCY 240
           TNCAGMCINLCKFPCQDFIKDSLGMPV+MVPNFDDMSCEMIFGK+PPA IDDPALKQPCY
Sbjct: 181 TNCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCY 240

Query: 241 KLC 244
           KLC
Sbjct: 241 KLC 241

[Close]

BLAST of CmUC07G127170 vs. ExPASy TrEMBL
Match: A0A0A0LIR1 (DUF4033 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G226860 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.6e-118
Identity = 215/243 (88.48%), Postives = 228/243 (93.83%), Query Frame = 0


Query: 1   MDLRVIEARRVILPTTMMSNNKMKKLRRRSIPCVAVLTRQAESGVMEETRKTNTVYSDNW 60
           MDLRVI+  RVILP TMM+NNKM KLRR+SI C  VLTR AE  ++EETRKTNTVY+DNW
Sbjct: 1   MDLRVIQDTRVILP-TMMNNNKM-KLRRKSILCFGVLTRPAEGELIEETRKTNTVYTDNW 60

Query: 61  FDKIAIDHLSQAVQATSGWKSKKSGYESLLEVTTMASRNFNHIKQREVVIQALGRAFPKP 120
           FDKIAIDHLSQAVQATSGW+SKKSGYESL+EVTTMASRNFNHIKQ+EVVIQALG AFPKP
Sbjct: 61  FDKIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKP 120

Query: 121 ILSLIKALLPPSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKRERNVVQIHKCRFLEQ 180
           ILSLIKALLP SK AREYFA FTTVFFAWLVGPCEVKESEF+GKRE+NVVQIHKCRFLEQ
Sbjct: 121 ILSLIKALLPQSKLAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQ 180

Query: 181 TNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCY 240
           TNCAGMCINLCKFPCQDFIKDSLGMPV+MVPNFDDMSCEMIFGK+PPA IDDPALKQPCY
Sbjct: 181 TNCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCY 240

Query: 241 KLC 244
           KLC
Sbjct: 241 KLC 241

[Close]

BLAST of CmUC07G127170 vs. ExPASy TrEMBL
Match: A0A1S3BL84 (LOW QUALITY PROTEIN: beta-carotene isomerase D27, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491262 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 8.1e-118
Identity = 215/243 (88.48%), Postives = 227/243 (93.42%), Query Frame = 0


Query: 1   MDLRVIEARRVILPTTMMSNNKMKKLRRRSIPCVAVLTRQAESGVMEETRKTNTVYSDNW 60
           MDLRVI+   VILP TMM+NNKM KLRR++   V VLTR AE  V+EETRKT TVY+DNW
Sbjct: 1   MDLRVIQDTTVILP-TMMNNNKM-KLRRKTFFXVGVLTRSAEGEVIEETRKTKTVYTDNW 60

Query: 61  FDKIAIDHLSQAVQATSGWKSKKSGYESLLEVTTMASRNFNHIKQREVVIQALGRAFPKP 120
           FDKIAIDHLSQAVQATSGW+SKKSGYESLLEVTTMASRNFNHIKQ+EVVIQALGRAFPKP
Sbjct: 61  FDKIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKP 120

Query: 121 ILSLIKALLPPSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKRERNVVQIHKCRFLEQ 180
           ILSLIKALLP SKFAREYFA FTTVFFAWLVGPCEVKESEF+GKRE+NVVQIHKCRFLEQ
Sbjct: 121 ILSLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQ 180

Query: 181 TNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCY 240
           TNCAGMCINLCKFPCQDFIKDSLGMPV+MVPNFDDMSCEMIFGK+PPA IDDPALKQPCY
Sbjct: 181 TNCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCY 240

Query: 241 KLC 244
           KLC
Sbjct: 241 KLC 241

[Close]

BLAST of CmUC07G127170 vs. ExPASy TrEMBL
Match: A0A6J1HWX8 (beta-carotene isomerase D27, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466998 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 4.9e-115
Identity = 208/263 (79.09%), Postives = 231/263 (87.83%), Query Frame = 0


Query: 1   MDLRVIEARRVIL--PTTMMSNNKMKKLRRRSIPCVAVLTRQAESGVMEETRKTNTVYSD 60
           M++RV E RRVIL   T +  +NK KK+RR+SI CVAVLTR AESG  EETRK NTVY+D
Sbjct: 1   MEVRVGEERRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYTD 60

Query: 61  NWFDKIAIDHLSQAVQATSGWKSKKSGYESLLEVTTMASRNFNHIKQREVVIQALGRAFP 120
           NWF+KIAI H+SQAVQATSGW+SKKSGYESL+EV TMASRN+N IKQREV+IQALGRAFP
Sbjct: 61  NWFEKIAIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFP 120

Query: 121 KPILSLIKALLPPSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKRERNVVQIHKCRFL 180
            PILSLI+ LLP SKFAREYFA FTTVFFAWLVGPCEVKES+F+GK+E+NVVQIHKCRFL
Sbjct: 121 APILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKKEKNVVQIHKCRFL 180

Query: 181 EQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQP 240
           EQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPA +DDPALKQP
Sbjct: 181 EQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQP 240

Query: 241 CYKLCISLNTSLLLAFLIITFYF 262
           CYKLCI+L       F   ++Y+
Sbjct: 241 CYKLCINLTR----VFFFFSYYY 259

[Close]

BLAST of CmUC07G127170 vs. ExPASy TrEMBL
Match: A0A6J1HV96 (beta-carotene isomerase D27, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466998 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 4.9e-115
Identity = 208/263 (79.09%), Postives = 231/263 (87.83%), Query Frame = 0


Query: 1   MDLRVIEARRVIL--PTTMMSNNKMKKLRRRSIPCVAVLTRQAESGVMEETRKTNTVYSD 60
           M++RV E RRVIL   T +  +NK KK+RR+SI CVAVLTR AESG  EETRK NTVY+D
Sbjct: 1   MEVRVGEERRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYTD 60

Query: 61  NWFDKIAIDHLSQAVQATSGWKSKKSGYESLLEVTTMASRNFNHIKQREVVIQALGRAFP 120
           NWF+KIAI H+SQAVQATSGW+SKKSGYESL+EV TMASRN+N IKQREV+IQALGRAFP
Sbjct: 61  NWFEKIAIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFP 120

Query: 121 KPILSLIKALLPPSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKRERNVVQIHKCRFL 180
            PILSLI+ LLP SKFAREYFA FTTVFFAWLVGPCEVKES+F+GK+E+NVVQIHKCRFL
Sbjct: 121 APILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKKEKNVVQIHKCRFL 180

Query: 181 EQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQP 240
           EQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPA +DDPALKQP
Sbjct: 181 EQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQP 240

Query: 241 CYKLCISLNTSLLLAFLIITFYF 262
           CYKLCI+L       F   ++Y+
Sbjct: 241 CYKLCINLTR----VFFFFSYYY 259

[Close]

BLAST of CmUC07G127170 vs. TAIR 10
Match: AT1G03055.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 143 Blast hits to 143 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 223.0 bits (567), Expect = 3.2e-58
Identity = 115/256 (44.92%), Postives = 167/256 (65.23%), Query Frame = 0


Query: 1   MDLRVIEARRVILPTTMMSNNKMKKLRRRSIPCVAVLTRQAESGVMEETRKT-------- 60
           M+ ++  ++  I   T   N+    L RRS     + ++   SG ++  ++T        
Sbjct: 1   MNTKLSLSQTKIFTFTTWFNDTRSGLDRRSSISPTLCSKPVYSGKLKAAKETARIETSNT 60

Query: 61  -NTVYSDNWFDKIAIDHLSQAVQATSG--WKSKKSGYESLLEVTTMASRNFNHIKQREVV 120
            N    D++F KIAI++LS+ +Q  +G    SK + Y+ L++  T  SRNF+  +Q E V
Sbjct: 61  KNASIEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTATRVSRNFDTKQQHEFV 120

Query: 121 IQALGRAFPKPILSLIKALLPPSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKRERNV 180
           + +L RA P  I SLIK   PPSK +RE FA+FTT+ FAWLVGP EV+E+E  G++E++V
Sbjct: 121 LSSLDRALPTVISSLIKMAFPPSKVSRELFALFTTISFAWLVGPSEVRETEVNGRKEKSV 180

Query: 181 VQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAP 240
           V I KCRFLEQ+NC GMC ++CK P Q FIK+SLGMP+ M P+F+D+SC+M+FG++PP  
Sbjct: 181 VYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPDFNDLSCKMMFGREPPEI 240

Query: 241 IDDPALKQPCYKLCIS 246
            DDPA+KQPC++ C S
Sbjct: 241 EDDPAMKQPCFEFCKS 256

[Close]

BLAST of CmUC07G127170 vs. TAIR 10
Match: AT1G64680.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 154.1 bits (388), Expect = 1.8e-37
Identity = 85/232 (36.64%), Postives = 124/232 (53.45%), Query Frame = 0


Query: 27  RRRSIPCVAVLTRQAESGVMEETRKTNTVYSDNWFDKIAIDHLSQAVQATSGWKSKKS-- 86
           RRRS  C       AE           T Y D   +++ +   ++ +      K K +  
Sbjct: 15  RRRSTRCGI-----AEPSGEPAPMGLKTRYEDGLVERVFMGLFARKMDKFGSKKKKDTKE 74

Query: 87  ------GYESLLEVTTMASRNFNHIKQREVVIQALGRAFPKPILSLIKALLPPSKFAREY 146
                  YES +EV+    +  + ++Q+E V + L    P       + L PP+K+A E+
Sbjct: 75  KGFWEYDYESFVEVSKRVMQGRSRVQQQEAVREVLLSMLPPGAPEQFRKLFPPTKWAAEF 134

Query: 147 FAVFTTVFFAWLVGPCEVKESEFEGKRERNVVQIHKCRFLEQTNCAGMCINLCKFPCQDF 206
            A  T  FF WLVGP +V E E  G ++R+ V+I KCR+LE + C GMC+N+CK P QDF
Sbjct: 135 NAALTVPFFHWLVGPSQVIEVEVNGVKQRSGVRIKKCRYLENSGCVGMCVNMCKIPTQDF 194

Query: 207 IKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCY-KLCISLNTS 250
             +  G+P++M PN++DMSCEMI+G+ PPA  +D A KQPC   +C   N S
Sbjct: 195 FTNEFGLPLTMNPNYEDMSCEMIYGQAPPAFEEDVATKQPCLADICSMSNPS 241

[Close]

BLAST of CmUC07G127170 vs. TAIR 10
Match: AT1G03055.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 123.2 bits (308), Expect = 3.5e-28
Identity = 73/187 (39.04%), Postives = 110/187 (58.82%), Query Frame = 0


Query: 1   MDLRVIEARRVILPTTMMSNNKMKKLRRRSIPCVAVLTRQAESGVMEETRKT-------- 60
           M+ ++  ++  I   T   N+    L RRS     + ++   SG ++  ++T        
Sbjct: 1   MNTKLSLSQTKIFTFTTWFNDTRSGLDRRSSISPTLCSKPVYSGKLKAAKETARIETSNT 60

Query: 61  -NTVYSDNWFDKIAIDHLSQAVQATSG--WKSKKSGYESLLEVTTMASRNFNHIKQREVV 120
            N    D++F KIAI++LS+ +Q  +G    SK + Y+ L++  T  SRNF+  +Q E V
Sbjct: 61  KNASIEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTATRVSRNFDTKQQHEFV 120

Query: 121 IQALGRAFPKPILSLIKALLPPSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKRERNV 177
           + +L RA P  I SLIK   PPSK +RE FA+FTT+ FAWLVGP EV+E+E  G++E++V
Sbjct: 121 LSSLDRALPTVISSLIKMAFPPSKVSRELFALFTTISFAWLVGPSEVRETEVNGRKEKSV 180

[Close]

BLAST of CmUC07G127170 vs. TAIR 10
Match: AT4G01995.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 109.4 bits (272), Expect = 5.2e-24
Identity = 73/237 (30.80%), Postives = 110/237 (46.41%), Query Frame = 0


Query: 14  PTTMMSNNKM--KKLRRRSIPCVAVLTRQAESGVMEETRKTNTVYSDNWFDKIAIDHLSQ 73
           PTT++ +N    K +  R + C         S V  +       Y     D   +     
Sbjct: 12  PTTIVFSNSFSTKLILTRRLRC----RISNSSEVKSDEGAPKLEYKPGPLDDFFMQSFRN 71

Query: 74  AVQATSGWKSKKSGYESLLE-VTTMASRNFNHIKQREVVIQALGRAFPKPILSLIKALLP 133
            +    G  S+K GY  L+E V  +  +     +  +  ++ L   FP  IL L K L+ 
Sbjct: 72  KLVEEVGSDSEKPGYVGLIELVKLLLLKGRTRSETSDAAVRILKSLFPPLILELYKLLIA 131

Query: 134 P---SKFAREYFAVFTTVFFAWLVGPCEVKESEF-EGKRERNVVQIHKCRFLEQTNCAGM 193
           P    K A    A  T +   WL+GP +V   +   G+   + V + KC++LE++ C G+
Sbjct: 132 PIAQGKLAALMVARVTVLTCQWLMGPSKVNIIDLPNGESWDSGVFVEKCQYLEESKCVGV 191

Query: 194 CINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCYKLC 244
           CIN CK P Q F KD +G+P+ M PNF D SC+  FG  PP   DD  + +PC++ C
Sbjct: 192 CINTCKLPTQTFFKDYMGVPLVMEPNFKDYSCQFKFGVAPPE--DDGNVNEPCFETC 242

The following BLAST results are available for this feature:

BLAST of CmUC07G127170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888066.1	1.6e-139	92.57	beta-carotene isomerase D27, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_038888067.1	3.4e-126	92.65	beta-carotene isomerase D27, chloroplastic isoform X2 [Benincasa hispida]	[more]
KAA0057411.1	3.1e-119	89.30	beta-carotene isomerase D27 [Cucumis melo var. makuwa] >TYK30110.1 beta-carotene...	[more]
XP_004145371.1	3.4e-118	88.48	beta-carotene isomerase D27, chloroplastic [Cucumis sativus] >KGN61698.1 hypothe...	[more]
XP_008449360.1	1.7e-117	88.48	PREDICTED: LOW QUALITY PROTEIN: beta-carotene isomerase D27, chloroplastic [Cucu...	[more]

BLAST of CmUC07G127170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
R4HZ96	9.0e-82	60.08	Beta-carotene isomerase D27, chloroplastic OS=Medicago truncatula OX=3880 GN=D27...	[more]
C7AU21	8.8e-69	60.28	Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica OX=39...	[more]
Q7XA78	4.5e-57	44.92	Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=D2...	[more]

BLAST of CmUC07G127170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E3G1	1.5e-119	89.30	Beta-carotene isomerase D27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A0A0LIR1	1.6e-118	88.48	DUF4033 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G226860 PE=...	[more]
A0A1S3BL84	8.1e-118	88.48	LOW QUALITY PROTEIN: beta-carotene isomerase D27, chloroplastic OS=Cucumis melo ...	[more]
A0A6J1HWX8	4.9e-115	79.09	beta-carotene isomerase D27, chloroplastic-like isoform X2 OS=Cucurbita maxima O...	[more]
A0A6J1HV96	4.9e-115	79.09	beta-carotene isomerase D27, chloroplastic-like isoform X1 OS=Cucurbita maxima O...	[more]

BLAST of CmUC07G127170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03055.1	3.2e-58	44.92	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G64680.1	1.8e-37	36.64	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G03055.2	3.5e-28	39.04	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G01995.1	5.2e-24	30.80	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025114	Beta-carotene isomerase D27-like, C-terminal	PFAM	PF13225	DUF4033	coord: 149..228 e-value: 3.3E-33 score: 113.5
None	No IPR available	PANTHER	PTHR33591:SF1	BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC	coord: 12..247
IPR038938	Beta-carotene isomerase D27-like	PANTHER	PTHR33591	BETA-CAROTENE ISOMERASE D27	coord: 12..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC07G127170.1	CmUC07G127170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010223	secondary shoot formation
biological_process	GO:1901601	strigolactone biosynthetic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0016859	cis-trans isomerase activity
molecular_function	GO:0005506	iron ion binding