CmUC06G125510 (gene) Watermelon (USVL531) v1

Overview
NameCmUC06G125510
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr06: 28860216 .. 28861320 (-)
RNA-Seq ExpressionCmUC06G125510
SyntenyCmUC06G125510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTTGGCTGGGAGGTACATGCAGTTGGTCTTCATGGATCATAGTTTAATAATTTACAGAAGCTAGAGTCACCATGTGAAGTGATGAATAATGCAAGACATTTGCAAAAAGGCTGCCAGATTACTTGAAATTATGGCTGTTCTCTCCTAGCCTCGGAGATGCTACCAGTGATCTTTCGATATTTACTTCAGGTGCGCCAATGTTAAGATATGTGATAAATTATTCACATGTCTGTTAATTTTGTCCCGTCTGCATTGTATCATAATACTTGGAGAACGTGTAATCAAAGGAGTAAAAACTGTAAAATAAAAAAGTGCCCACAAAGATTGGGATTATGCCATCATGCTAAGTTTTATCAATTATAACTTCAGGTCCACCTGGTTATAACAAACAGATTGGTTATTCTGGAAGTTAGGATTGGGATTGTGTCCAATGTCCATCGTGCTAAAAGAAAACCTATTTGAATGACTCTTGATAGGAAGGAGGATGTTATATCTAAAATCCCAACGACTATAGAAGGGAGGAACTGACTAATCGTCTAAAATTTAAATGTCAACAACCACTTTATATTTGGAATTGTTGAAAAGTAAGATCTCTGTATCTTGATATAGGTTAAACAAAGAACAAAATACTTTATTTCTTTCTTTCTATAGCAGAGGATTTGAAGATTCTTGGTTCTCAGGGGCCAAAAAGTTTGGTCGAGACCATAACTCTTTTCGAAGTGTTGCATTTTGGTTGCTGCTTTGATGCAGCATATTCAGGTTAGAACTGGCAGTTGATAATTACATTCAACTTGGATACTCATAGCATTGTTTTGACTTTTGACATGTATCTGACAACGTCTTTACCCATACTACAACTACAAAGATCTATTTCCAGTTTCACTAGCATACACTAAATAGTGGGTGACTATAAGAAATTTGGTTTGTTCTTTTAATCTTTAAAGATAAACAAAACACTGTTCTCTGGTTTGTTGACAGATTATAGAGTGCCTCAAGAACAACTTGCATTATGGCTAGAGCAGGATCCCACCTCAACATAACGGCTAAAATATGGAGTTCATCTTTGTTGATTTCTAGGACATTATGTTGCACCTGTGTGA

mRNA sequence

ATGGGCTTGGCTGGGAGGCTGCCAGATTACTTGAAATTATGGCTGTTCTCTCCTAGCCTCGGAGATGCTACCAGTGATCTTTCGATATTTACTTCAGAGGATTTGAAGATTCTTGGTTCTCAGGGGCCAAAAAGTTTGGTCGAGACCATAACTCTTTTCGAAGTGTTGCATTTTGGTTGCTGCTTTGATGCAGCATATTCAGGACATTATGTTGCACCTGTGTGA

Coding sequence (CDS)

ATGGGCTTGGCTGGGAGGCTGCCAGATTACTTGAAATTATGGCTGTTCTCTCCTAGCCTCGGAGATGCTACCAGTGATCTTTCGATATTTACTTCAGAGGATTTGAAGATTCTTGGTTCTCAGGGGCCAAAAAGTTTGGTCGAGACCATAACTCTTTTCGAAGTGTTGCATTTTGGTTGCTGCTTTGATGCAGCATATTCAGGACATTATGTTGCACCTGTGTGA

Protein sequence

MGLAGRLPDYLKLWLFSPSLGDATSDLSIFTSEDLKILGSQGPKSLVETITLFEVLHFGCCFDAAYSGHYVAPV
Homology
[Close]
BLAST of CmUC06G125510 vs. NCBI nr
Match: KGN63549.1 (hypothetical protein Csa_013892 [Cucumis sativus])

HSP 1 Score: 71.6 bits (174), Expect = 3.1e-09
Identity = 41/61 (67.21%), Postives = 44/61 (72.13%), Query Frame = 0 

Query: 12 KLWLFSPSLGDATSDLSIFTS-EDLKILGS----QGPKSLVETITLFEVLHFGCCFDAAY 68
          KLWLFS    DATSDL IFTS EDLKIL S         +V+TITLFEVLHF CCF+AAY
Sbjct: 11 KLWLFSAGFEDATSDLWIFTSAEDLKILCSFLLRDQKVLMVKTITLFEVLHFDCCFNAAY 70

[Close]
BLAST of CmUC06G125510 vs. ExPASy TrEMBL
Match: A0A0A0LRE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004150 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-09
Identity = 41/61 (67.21%), Postives = 44/61 (72.13%), Query Frame = 0 

Query: 12 KLWLFSPSLGDATSDLSIFTS-EDLKILGS----QGPKSLVETITLFEVLHFGCCFDAAY 68
          KLWLFS    DATSDL IFTS EDLKIL S         +V+TITLFEVLHF CCF+AAY
Sbjct: 11 KLWLFSAGFEDATSDLWIFTSAEDLKILCSFLLRDQKVLMVKTITLFEVLHFDCCFNAAY 70

The following BLAST results are available for this feature:
BLAST of CmUC06G125510 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63549.13.1e-0967.21hypothetical protein Csa_013892 [Cucumis sativus][more]
BLAST of CmUC06G125510 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC06G125510 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRE91.5e-0967.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004150 PE=4 SV=1[more]
BLAST of CmUC06G125510 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC06G125510.1CmUC06G125510.1mRNA