CmUC06G124480 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G124480
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	transcription factor PRE3-like
Location	CmU531Chr06: 27947736 .. 27948869 (+)
RNA-Seq Expression	CmUC06G124480
Synteny	CmUC06G124480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCATGCAATTTGTTTTTTTTTCCAGTCTTCAAAAGAAAACCCATTACCTTCTACTTGAGTGATTTGCACACTGTCTCATCTCTCTTCATCTTCAAAATCAAAAAACCCTATTCATTATTCATAATGCAAACAAACCCCAAAATCACTTTGTTTAGTTAGTTCTTCTAATTAGTTGATCATTAACATTATTAATCACCCACTTACATATATACTTTACAAGAAGAAAGAGATGTCAAGCAGAAGATCTAGATCTAGACAATCAGGTAGTTCAAGAATCACTGATGATCAAATTAATGATCTTGTTTCCAAGTTGCAACAACTTCTTCCTGAGATTCGCCACACGCAATCCGATAAGGTAACAACGCAAAATGATCTATTGAAACTTCTCTAAATCTCTCCTCTTTTTGTATTTACGAATATGACTCAATAAGTAAGTATATATGAGCAATACATATATGTTTAGTTCTAATACCTTGTTAAATTTATAGGTTTCGGCAGCAAAAGTGTTGCAGGAGACGTGCAACTACATAAGAAACTTGCATAGAGAAGTGGATGATTTAAGTGAGAGACTTTCAGAGTTGTTGGCAACATCTGATACTGCTCAAGCTGCCATTATTAGGAGTTTACTTATGCAATAGAGATCAAAGTGGTATTTTTCCATATGACAAGATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTAGCTGATTAATTTTGAGGTTTTTGCTATGTTTGGTTTCTGACATAGTTGCTATTTTCAATGCTCTTTCAGAGACACTCCATCAATGTCGTTTTGTAAAACTCTTCTCAATCAAGTCTATTATTATTCATCAATAAAATTTCTTTTCTTTTCTTTTCTCAACTCTTTTATTTGTGACTTAAATGTGATAGCTCCATTGTTTTTGGAGAAGTTAACGTTGTTGTAAGTTAATAACTTATTATCTATAACCCCCTCTTTCTTCTTCATTTGTTACATGATAGATATGGTTCCAAACCGTTTTTTCCCTTGTTTTACAATTTTCACAATTTTTTTTAATAACCATAGATTATGTTTTTTTTAAAAATTAATCATTTAATATAATTTTTTGTTTTTTTTTTTTCTTGTTTTATTATAATAGGAGCTAAAACCGAC

mRNA sequence

CCCATGCAATTTGTTTTTTTTTCCAGTCTTCAAAAGAAAACCCATTACCTTCTACTTGAGTGATTTGCACACTGTCTCATCTCTCTTCATCTTCAAAATCAAAAAACCCTATTCATTATTCATAATGCAAACAAACCCCAAAATCACTTTGTTTAGTTAGTTCTTCTAATTAGTTGATCATTAACATTATTAATCACCCACTTACATATATACTTTACAAGAAGAAAGAGATGTCAAGCAGAAGATCTAGATCTAGACAATCAGGTAGTTCAAGAATCACTGATGATCAAATTAATGATCTTGTTTCCAAGTTGCAACAACTTCTTCCTGAGATTCGCCACACGCAATCCGATAAGGTTTCGGCAGCAAAAGTGTTGCAGGAGACGTGCAACTACATAAGAAACTTGCATAGAGAAGTGGATGATTTAAGTGAGAGACTTTCAGAGTTGTTGGCAACATCTGATACTGCTCAAGCTGCCATTATTAGGAGTTTACTTATGCAATAGAGATCAAAGTGGTATTTTTCCATATGACAAGATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTAGCTGATTAATTTTGAGGTTTTTGCTATGTTTGGTTTCTGACATAGTTGCTATTTTCAATGCTCTTTCAGAGACACTCCATCAATGTCGTTTTGTAAAACTCTTCTCAATCAAGTCTATTATTATTCATCAATAAAATTTCTTTTCTTTTCTTTTCTCAACTCTTTTATTTGTGACTTAAATGTGATAGCTCCATTGTTTTTGGAGAAGTTAACGTTGTTGTAAGTTAATAACTTATTATCTATAACCCCCTCTTTCTTCTTCATTTGTTACATGATAGATATGGTTCCAAACCGTTTTTTCCCTTGTTTTACAATTTTCACAATTTTTTTTAATAACCATAGATTATGTTTTTTTTAAAAATTAATCATTTAATATAATTTTTTGTTTTTTTTTTTTCTTGTTTTATTATAATAGGAGCTAAAACCGAC

Coding sequence (CDS)

ATGTCAAGCAGAAGATCTAGATCTAGACAATCAGGTAGTTCAAGAATCACTGATGATCAAATTAATGATCTTGTTTCCAAGTTGCAACAACTTCTTCCTGAGATTCGCCACACGCAATCCGATAAGGTTTCGGCAGCAAAAGTGTTGCAGGAGACGTGCAACTACATAAGAAACTTGCATAGAGAAGTGGATGATTTAAGTGAGAGACTTTCAGAGTTGTTGGCAACATCTGATACTGCTCAAGCTGCCATTATTAGGAGTTTACTTATGCAATAG

Protein sequence

MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHTQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ

Homology

[Close]

BLAST of CmUC06G124480 vs. NCBI nr
Match: XP_038880650.1 (transcription factor PRE3-like [Benincasa hispida])

HSP 1 Score: 166.8 bits (421), Expect = 8.8e-38
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHTQSDKVSAAKVLQETCNYIRNLH 60
          MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHTQSDKVSAAKVLQETCNYIRNLH
Sbjct: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHTQSDKVSAAKVLQETCNYIRNLH 60

Query: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          REVDDLSERLSELLATSDTAQAAIIRSLLMQ
Sbjct: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 91

[Close]

BLAST of CmUC06G124480 vs. NCBI nr
Match: XP_022987208.1 (transcription factor PRE3-like [Cucurbita maxima])

HSP 1 Score: 161.0 bits (406), Expect = 4.8e-36
Identity = 86/91 (94.51%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHTQSDKVSAAKVLQETCNYIRNLH 60
          MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRH+QSDKVSAAK+LQETCNYI+NLH
Sbjct: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHSQSDKVSAAKILQETCNYIKNLH 60

Query: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          REVDDLSERLSELLA+SDTAQAAIIR+LLMQ
Sbjct: 61 REVDDLSERLSELLASSDTAQAAIIRNLLMQ 91

[Close]

BLAST of CmUC06G124480 vs. NCBI nr
Match: XP_022135424.1 (transcription factor ILI6-like [Momordica charantia])

HSP 1 Score: 160.6 bits (405), Expect = 6.3e-36
Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHTQSDKVSAAKVLQETCNYIRNLH 60
          MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRH QSDKVSAA VLQETCNYIR+LH
Sbjct: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHRQSDKVSAANVLQETCNYIRSLH 60

Query: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          REVDDLSERLSELLATSDTAQAAIIRSLLMQ
Sbjct: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 91

[Close]

BLAST of CmUC06G124480 vs. NCBI nr
Match: XP_008453188.1 (PREDICTED: transcription factor PRE3-like [Cucumis melo])

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35
Identity = 90/92 (97.83%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSR-ITDDQINDLVSKLQQLLPEIRHTQSDKVSAAKVLQETCNYIRNL 60
          MSSRRSRSRQSGSSR ITDDQINDLVSKLQQLLPEIRH QSDKVSAAKVLQETCNYIRNL
Sbjct: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNL 60

Query: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          HREVDDLSERLSELLATSDTAQAAIIRSLLMQ
Sbjct: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92

[Close]

BLAST of CmUC06G124480 vs. NCBI nr
Match: XP_022921825.1 (transcription factor PRE3-like [Cucurbita moschata] >KAG7023186.1 Transcription factor PRE4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159.5 bits (402), Expect = 1.4e-35
Identity = 85/91 (93.41%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHTQSDKVSAAKVLQETCNYIRNLH 60
          MSSRRSRSRQSG SRITDDQINDLVSKLQQLLPEIRH+QSDKVSAAK+LQETCNYI+NLH
Sbjct: 1  MSSRRSRSRQSGGSRITDDQINDLVSKLQQLLPEIRHSQSDKVSAAKILQETCNYIKNLH 60

Query: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          REVDDLSERLSELLA+SDTAQAAIIR+LLMQ
Sbjct: 61 REVDDLSERLSELLASSDTAQAAIIRNLLMQ 91

[Close]

BLAST of CmUC06G124480 vs. ExPASy Swiss-Prot
Match: Q9CA64 (Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 6.4e-31
Identity = 76/93 (81.72%), Postives = 86/93 (92.47%), Query Frame = 0


Query: 1  MSSRRSRSRQ-SGSSRITDDQINDLVSKLQQLLPEIRHT-QSDKVSAAKVLQETCNYIRN 60
          MS RRSRSRQ SG+SRI++DQINDL+ KLQQLLPE+R + +SDKVSAA+VLQ+TCNYIRN
Sbjct: 1  MSGRRSRSRQSSGTSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRN 60

Query: 61 LHREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          LHREVDDLSERLSELLA SDTAQAA+IRSLL Q
Sbjct: 61 LHREVDDLSERLSELLANSDTAQAALIRSLLTQ 93

[Close]

BLAST of CmUC06G124480 vs. ExPASy Swiss-Prot
Match: Q8GW32 (Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 4.1e-30
Identity = 75/92 (81.52%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1  MSSRR-SRSRQSGSSRITDDQINDLVSKLQQLLPEIRHTQSDKVSAAKVLQETCNYIRNL 60
          MSSRR SRSRQSGSSRI+DDQI+DLVSKLQ L+PE+R  +SDKVSA+KVLQETCNYIRNL
Sbjct: 1  MSSRRSSRSRQSGSSRISDDQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNL 60

Query: 61 HREVDDLSERLSELLATSD--TAQAAIIRSLL 90
          HREVDDLS+RLSELLA++D  +A+AAIIRSLL
Sbjct: 61 HREVDDLSDRLSELLASTDDNSAEAAIIRSLL 92

[Close]

BLAST of CmUC06G124480 vs. ExPASy Swiss-Prot
Match: B8APB5 (Transcription factor ILI6 OS=Oryza sativa subsp. indica OX=39946 GN=ILI6 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 5.4e-30
Identity = 74/92 (80.43%), Postives = 84/92 (91.30%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHTQSDKVSAAKVLQETCNYIRNLH 60
          MSSRRSRSRQSGSSRITD+QI+DLVSKLQ LLPE R   +D+V +++VLQETCNYIR+LH
Sbjct: 1  MSSRRSRSRQSGSSRITDEQISDLVSKLQDLLPEARLRSNDRVPSSRVLQETCNYIRSLH 60

Query: 61 REVDDLSERLSELLATSD--TAQAAIIRSLLM 91
          +EVDDLSERLSELLATSD  +AQAAIIRSLLM
Sbjct: 61 QEVDDLSERLSELLATSDMSSAQAAIIRSLLM 92

[Close]

BLAST of CmUC06G124480 vs. ExPASy Swiss-Prot
Match: Q0DUR2 (Transcription factor ILI6 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI6 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 5.4e-30
Identity = 74/92 (80.43%), Postives = 84/92 (91.30%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHTQSDKVSAAKVLQETCNYIRNLH 60
          MSSRRSRSRQSGSSRITD+QI+DLVSKLQ LLPE R   +D+V +++VLQETCNYIR+LH
Sbjct: 1  MSSRRSRSRQSGSSRITDEQISDLVSKLQDLLPEARLRSNDRVPSSRVLQETCNYIRSLH 60

Query: 61 REVDDLSERLSELLATSD--TAQAAIIRSLLM 91
          +EVDDLSERLSELLATSD  +AQAAIIRSLLM
Sbjct: 61 QEVDDLSERLSELLATSDMSSAQAAIIRSLLM 92

[Close]

BLAST of CmUC06G124480 vs. ExPASy Swiss-Prot
Match: F4JCN9 (Transcription factor PRE4 OS=Arabidopsis thaliana OX=3702 GN=PRE4 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.6e-26
Identity = 65/92 (70.65%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEI-RHTQSDKVSAAKVLQETCNYIRNL 60
          MSSR+SRSRQ+G+S ITD+QINDLV +L +LLPE+  + +S KVSA++VLQETC+YIRNL
Sbjct: 1  MSSRKSRSRQTGASMITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNL 60

Query: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
           +EVDDLSERLS+LL ++D+AQAA+IRSLLMQ
Sbjct: 61 SKEVDDLSERLSQLLESTDSAQAALIRSLLMQ 92

[Close]

BLAST of CmUC06G124480 vs. ExPASy TrEMBL
Match: A0A6J1JIT1 (transcription factor PRE3-like OS=Cucurbita maxima OX=3661 GN=LOC111484830 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.3e-36
Identity = 86/91 (94.51%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHTQSDKVSAAKVLQETCNYIRNLH 60
          MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRH+QSDKVSAAK+LQETCNYI+NLH
Sbjct: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHSQSDKVSAAKILQETCNYIKNLH 60

Query: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          REVDDLSERLSELLA+SDTAQAAIIR+LLMQ
Sbjct: 61 REVDDLSERLSELLASSDTAQAAIIRNLLMQ 91

[Close]

BLAST of CmUC06G124480 vs. ExPASy TrEMBL
Match: A0A6J1C1E4 (transcription factor ILI6-like OS=Momordica charantia OX=3673 GN=LOC111007381 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.1e-36
Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHTQSDKVSAAKVLQETCNYIRNLH 60
          MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRH QSDKVSAA VLQETCNYIR+LH
Sbjct: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHRQSDKVSAANVLQETCNYIRSLH 60

Query: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          REVDDLSERLSELLATSDTAQAAIIRSLLMQ
Sbjct: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 91

[Close]

BLAST of CmUC06G124480 vs. ExPASy TrEMBL
Match: A0A1S3BWE2 (transcription factor PRE3-like OS=Cucumis melo OX=3656 GN=LOC103493979 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.2e-36
Identity = 90/92 (97.83%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSR-ITDDQINDLVSKLQQLLPEIRHTQSDKVSAAKVLQETCNYIRNL 60
          MSSRRSRSRQSGSSR ITDDQINDLVSKLQQLLPEIRH QSDKVSAAKVLQETCNYIRNL
Sbjct: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNL 60

Query: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          HREVDDLSERLSELLATSDTAQAAIIRSLLMQ
Sbjct: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92

[Close]

BLAST of CmUC06G124480 vs. ExPASy TrEMBL
Match: A0A6J1E6W2 (transcription factor PRE3-like OS=Cucurbita moschata OX=3662 GN=LOC111429966 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 6.8e-36
Identity = 85/91 (93.41%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHTQSDKVSAAKVLQETCNYIRNLH 60
          MSSRRSRSRQSG SRITDDQINDLVSKLQQLLPEIRH+QSDKVSAAK+LQETCNYI+NLH
Sbjct: 1  MSSRRSRSRQSGGSRITDDQINDLVSKLQQLLPEIRHSQSDKVSAAKILQETCNYIKNLH 60

Query: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          REVDDLSERLSELLA+SDTAQAAIIR+LLMQ
Sbjct: 61 REVDDLSERLSELLASSDTAQAAIIRNLLMQ 91

[Close]

BLAST of CmUC06G124480 vs. ExPASy TrEMBL
Match: A0A6J1IDH8 (transcription factor ILI6-like OS=Cucurbita maxima OX=3661 GN=LOC111471611 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.4e-35
Identity = 86/91 (94.51%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHTQSDKVSAAKVLQETCNYIRNLH 60
          MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRH QSDK SAA VLQETCNYIR+LH
Sbjct: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHRQSDKSSAAHVLQETCNYIRSLH 60

Query: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          REVDDLSERL+ELLATSDTAQAAIIRSLLMQ
Sbjct: 61 REVDDLSERLAELLATSDTAQAAIIRSLLMQ 91

[Close]

BLAST of CmUC06G124480 vs. TAIR 10
Match: AT1G74500.1 (activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 )

HSP 1 Score: 134.4 bits (337), Expect = 4.5e-32
Identity = 76/93 (81.72%), Postives = 86/93 (92.47%), Query Frame = 0


Query: 1  MSSRRSRSRQ-SGSSRITDDQINDLVSKLQQLLPEIRHT-QSDKVSAAKVLQETCNYIRN 60
          MS RRSRSRQ SG+SRI++DQINDL+ KLQQLLPE+R + +SDKVSAA+VLQ+TCNYIRN
Sbjct: 1  MSGRRSRSRQSSGTSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRN 60

Query: 61 LHREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          LHREVDDLSERLSELLA SDTAQAA+IRSLL Q
Sbjct: 61 LHREVDDLSERLSELLANSDTAQAALIRSLLTQ 93

[Close]

BLAST of CmUC06G124480 vs. TAIR 10
Match: AT1G26945.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 131.7 bits (330), Expect = 2.9e-31
Identity = 75/92 (81.52%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1  MSSRR-SRSRQSGSSRITDDQINDLVSKLQQLLPEIRHTQSDKVSAAKVLQETCNYIRNL 60
          MSSRR SRSRQSGSSRI+DDQI+DLVSKLQ L+PE+R  +SDKVSA+KVLQETCNYIRNL
Sbjct: 1  MSSRRSSRSRQSGSSRISDDQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNL 60

Query: 61 HREVDDLSERLSELLATSD--TAQAAIIRSLL 90
          HREVDDLS+RLSELLA++D  +A+AAIIRSLL
Sbjct: 61 HREVDDLSDRLSELLASTDDNSAEAAIIRSLL 92

[Close]

BLAST of CmUC06G124480 vs. TAIR 10
Match: AT3G47710.1 (BANQUO 3 )

HSP 1 Score: 118.6 bits (296), Expect = 2.6e-27
Identity = 65/92 (70.65%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEI-RHTQSDKVSAAKVLQETCNYIRNL 60
          MSSR+SRSRQ+G+S ITD+QINDLV +L +LLPE+  + +S KVSA++VLQETC+YIRNL
Sbjct: 1  MSSRKSRSRQTGASMITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNL 60

Query: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
           +EVDDLSERLS+LL ++D+AQAA+IRSLLMQ
Sbjct: 61 SKEVDDLSERLSQLLESTDSAQAALIRSLLMQ 92

[Close]

BLAST of CmUC06G124480 vs. TAIR 10
Match: AT3G28857.1 (basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 104.8 bits (260), Expect = 3.8e-23
Identity = 63/93 (67.74%), Postives = 77/93 (82.80%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEI-RHTQSDKVSAAKVLQETCNYIRNL 60
          MS+RRSR + S +SRI+DDQ+ DLVSKL+Q LPEI    +SDKVSA+KVLQETCNYIR L
Sbjct: 1  MSNRRSR-QTSNASRISDDQMIDLVSKLRQFLPEIHERRRSDKVSASKVLQETCNYIRKL 60

Query: 61 HREVDDLSERLSELL--ATSDTAQAAIIRSLLM 91
          HREVD+LS+RLS+LL     D+ +AA+IRSLLM
Sbjct: 61 HREVDNLSDRLSQLLDSVDEDSPEAAVIRSLLM 92

[Close]

BLAST of CmUC06G124480 vs. TAIR 10
Match: AT5G39860.1 (basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 102.1 bits (253), Expect = 2.5e-22
Identity = 61/93 (65.59%), Postives = 79/93 (84.95%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEI-RHTQSDKVSAAKVLQETCNYIRNL 60
          MS+RRSR + S + RI+D+Q+ DLVSKL+Q+LPEI +  +SDK SA+KVLQETCNYIRNL
Sbjct: 1  MSNRRSR-QSSSAPRISDNQMIDLVSKLRQILPEIGQRRRSDKASASKVLQETCNYIRNL 60

Query: 61 HREVDDLSERLSELLAT--SDTAQAAIIRSLLM 91
          +REVD+LSERLS+LL +   D+ +AA+IRSLLM
Sbjct: 61 NREVDNLSERLSQLLESVDEDSPEAAVIRSLLM 92

The following BLAST results are available for this feature:

BLAST of CmUC06G124480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880650.1	8.8e-38	100.00	transcription factor PRE3-like [Benincasa hispida]	[more]
XP_022987208.1	4.8e-36	94.51	transcription factor PRE3-like [Cucurbita maxima]	[more]
XP_022135424.1	6.3e-36	96.70	transcription factor ILI6-like [Momordica charantia]	[more]
XP_008453188.1	1.1e-35	97.83	PREDICTED: transcription factor PRE3-like [Cucumis melo]	[more]
XP_022921825.1	1.4e-35	93.41	transcription factor PRE3-like [Cucurbita moschata] >KAG7023186.1 Transcription ...	[more]

BLAST of CmUC06G124480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA64	6.4e-31	81.72	Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1	[more]
Q8GW32	4.1e-30	81.52	Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1	[more]
B8APB5	5.4e-30	80.43	Transcription factor ILI6 OS=Oryza sativa subsp. indica OX=39946 GN=ILI6 PE=3 SV...	[more]
Q0DUR2	5.4e-30	80.43	Transcription factor ILI6 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI6 PE=1 ...	[more]
F4JCN9	3.6e-26	70.65	Transcription factor PRE4 OS=Arabidopsis thaliana OX=3702 GN=PRE4 PE=1 SV=1	[more]

BLAST of CmUC06G124480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JIT1	2.3e-36	94.51	transcription factor PRE3-like OS=Cucurbita maxima OX=3661 GN=LOC111484830 PE=4 ...	[more]
A0A6J1C1E4	3.1e-36	96.70	transcription factor ILI6-like OS=Momordica charantia OX=3673 GN=LOC111007381 PE...	[more]
A0A1S3BWE2	5.2e-36	97.83	transcription factor PRE3-like OS=Cucumis melo OX=3656 GN=LOC103493979 PE=4 SV=1	[more]
A0A6J1E6W2	6.8e-36	93.41	transcription factor PRE3-like OS=Cucurbita moschata OX=3662 GN=LOC111429966 PE=...	[more]
A0A6J1IDH8	4.4e-35	94.51	transcription factor ILI6-like OS=Cucurbita maxima OX=3661 GN=LOC111471611 PE=4 ...	[more]

BLAST of CmUC06G124480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74500.1	4.5e-32	81.72	activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1	[more]
AT1G26945.1	2.9e-31	81.52	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G47710.1	2.6e-27	70.65	BANQUO 3	[more]
AT3G28857.1	3.8e-23	67.74	basic helix-loop-helix (bHLH) DNA-binding family protein	[more]
AT5G39860.1	2.5e-22	65.59	basic helix-loop-helix (bHLH) DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 56..83
None	No IPR available	PANTHER	PTHR46446:SF3	TRANSCRIPTION FACTOR PRE3	coord: 1..90
None	No IPR available	CDD	cd11442	bHLH_AtPRE_like	coord: 16..76 e-value: 1.11668E-22 score: 80.8103
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 6..87 e-value: 1.1E-10 score: 43.5
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 19..77
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 19..60 e-value: 2.9E-7 score: 30.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 5..59 score: 11.261341
IPR044293	Transcription factor PRE	PANTHER	PTHR46446	TRANSCRIPTION FACTOR PRE	coord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G124480.1	CmUC06G124480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0040008	regulation of growth
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity