CmUC06G124290 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G124290
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr06: 27795698 .. 27796314 (+)
RNA-Seq Expression	CmUC06G124290
Synteny	CmUC06G124290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCAACAACCCGCCAGAAATTTCTCCCAACACTAAAACTACTTCTTCTCTCCACTATGTCTGTTCATTGGTGAAGAACAAGCTCGACCTTCCTCATCCCACCGACAATCATCTTCCCTCCTACTGGATTCTGCGACTACTGATTATACTTGCTTCCAAGGCTCCAAGAATCTTCCAATTCAAGAGTTCTCTCGACTCATACACCCTTGAGGACGCTGACGATGAGAGTAAGTAAATTTGATTTATACTAACACATGCATTTAACCTTAAATCTTATTCTTTAATCATCTTTATCAGATGCATTTAACCTTAAATCTTATTCTTTTATCATCTCTAACAGATGCATTTCGGCCGTTGGTTAGTGATGAACTCAATGTTGCCAATAGACGCAACAAACGGCCCCGTAACCTATCGCCGCCACCGCCGCCGCGGCCTCCATCACCACCCTCACCCCGACATCCAATACTTCATGAATGTAATTGTCAGGCAACCCTCTGTCATGCAAAACAATGTGGTTGTCGACAGGCTAACATGCCCTGCAACAATGGGTGTTTTTGTCACCAGGGGCCGGACTTTGTTTGCCACAACCCCCATACTCCAAGACCGGAGTAG

mRNA sequence

ATGGATTCCAACAACCCGCCAGAAATTTCTCCCAACACTAAAACTACTTCTTCTCTCCACTATGTCTGTTCATTGGTGAAGAACAAGCTCGACCTTCCTCATCCCACCGACAATCATCTTCCCTCCTACTGGATTCTGCGACTACTGATTATACTTGCTTCCAAGGCTCCAAGAATCTTCCAATTCAAGAGTTCTCTCGACTCATACACCCTTGAGGACGCTGACGATGAGAATGCATTTCGGCCGTTGGTTAGTGATGAACTCAATGTTGCCAATAGACGCAACAAACGGCCCCGTAACCTATCGCCGCCACCGCCGCCGCGGCCTCCATCACCACCCTCACCCCGACATCCAATACTTCATGAATGTAATTGTCAGGCAACCCTCTGTCATGCAAAACAATGTGGTTGTCGACAGGCTAACATGCCCTGCAACAATGGGTGTTTTTGTCACCAGGGGCCGGACTTTGTTTGCCACAACCCCCATACTCCAAGACCGGAGTAG

Coding sequence (CDS)

ATGGATTCCAACAACCCGCCAGAAATTTCTCCCAACACTAAAACTACTTCTTCTCTCCACTATGTCTGTTCATTGGTGAAGAACAAGCTCGACCTTCCTCATCCCACCGACAATCATCTTCCCTCCTACTGGATTCTGCGACTACTGATTATACTTGCTTCCAAGGCTCCAAGAATCTTCCAATTCAAGAGTTCTCTCGACTCATACACCCTTGAGGACGCTGACGATGAGAATGCATTTCGGCCGTTGGTTAGTGATGAACTCAATGTTGCCAATAGACGCAACAAACGGCCCCGTAACCTATCGCCGCCACCGCCGCCGCGGCCTCCATCACCACCCTCACCCCGACATCCAATACTTCATGAATGTAATTGTCAGGCAACCCTCTGTCATGCAAAACAATGTGGTTGTCGACAGGCTAACATGCCCTGCAACAATGGGTGTTTTTGTCACCAGGGGCCGGACTTTGTTTGCCACAACCCCCATACTCCAAGACCGGAGTAG

Protein sequence

MDSNNPPEISPNTKTTSSLHYVCSLVKNKLDLPHPTDNHLPSYWILRLLIILASKAPRIFQFKSSLDSYTLEDADDENAFRPLVSDELNVANRRNKRPRNLSPPPPPRPPSPPSPRHPILHECNCQATLCHAKQCGCRQANMPCNNGCFCHQGPDFVCHNPHTPRPE

Homology

The following BLAST results are available for this feature:

BLAST of CmUC06G124290 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC06G124290 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC06G124290 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC06G124290 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033467	Tesmin/TSO1-like CXC domain	SMART	SM01114	CXC_2	coord: 118..164 e-value: 0.0071 score: 15.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G124290.1	CmUC06G124290.1	mRNA