CmUC06G124030 (gene) Watermelon (USVL531) v1

Overview
NameCmUC06G124030
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Description50S ribosomal protein L4
LocationCmU531Chr06: 27558279 .. 27560251 (-)
RNA-Seq ExpressionCmUC06G124030
SyntenyCmUC06G124030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATGGATACAAGTTAAATTACTTAAAAGTGAAAAATGTTTTATTTATTTATTTATTTTAATTTCAAATTTTTTGGTAAAAACGGACGAAAGATGGTATTTTCTTCTTTGCCACTGATCTCCAGCGGGAGTGGATAACGAAGCTATCCGCAGAACTAAGCTCCTCCATCGCACCAACAATGGCGGCCTCCACCACGCCATTGTCGCTCTCTTTCTTCACTTCATCCGTCTTCCTTTCTTCCCCCAACCTCCAAAATTCCAAGCTCTGCTGCAATTGGAAACCTAACTCCCTTAAACCCCAAACTAAACCCTTATCAATCTCCTCCGAGCTCGCTACTCTTCCAGTCCTCTCCTTCACTGGAGAAAAAGTCGGTGAAACCTACCTCGACCTAAAATCCGCTCCACCGGAAACCGCCCGCGCTGTCGTTCACCGAGCCATTATCACCGATCAACAGAACAAGCGCCGTGGGACCGCCTCGACTCTCACCAGAGCTGAGGTTAGTGGAGGCGGCAGAAAACCCTACCAGCAGAAGAAAACCGGGAAGGCTCGTCGCGGTTCGATGCGTACTCCTCTCCGGCCAGGTGGAGGGGTGGTCTTCGGGCCGAAACCTAGAGATTGGTCAATTAAGATCAACAGAAAGGAGAAGAGACTGGCAATATCGACAGCGGTGGCTAGTGCGGCGGTTAATACGATAGTGGTGGAGGATTTTGGGGACAAGTTCGAGAAGCCGAAAACTAAAGAATTCATCGCTGCGTTGAAGAGATGGGGAATCGATCCAAAGGAGAAATCATTGTTCTTAATGACGGAGGTTTCTGATAATGTCCGACTATCTAGCCGTAATATTGGAACGTTGAAGTTGTTGACGCCGAGGACGCTGAATTTGTTTGATATTTTGGATTCCGATAAGTTGGTTTTGACGCCGGCGGCGGTAGAATATCTGAATGAGAGATATGGAATTAATTACGAAGAAGGAATCGAAGATGAAGAAGAAGAAGGTGGAGAAGACGAAGAAGGTTGATTTTCTTGCCTTTCTCCAATTCAATTATTCAATTAAAGAAATGATAGACTGCTTTAAGAACATACATTATCATTCCATACTTGAATTTTGTCTAGTTCAACATTCAAATCACATTACAGTGCCATCTTCTTATTGAATTCTTGATTTCTTAGATACCCTTTAATGATGGGATTCCTTAGAATTATACTGTGAATTCTGGTTTTGGTTCTGTTTCTATTAACATTTGCGTTGTCATTTTGTATAATCGATTTTCATCCAGATTTCTTACATTCTTCGTTTTGTTTCATTTCTGTAAGAAATCTTAGAGGAGTAATCGAAATGAAAAGCTAATTCAGGATGGATATTTGACTCTCTTCACCATAAAACCTATGTTTTTTTAACATTTTTTAACATTGCTCTTTCTTTCTGCCACCTCCATTGTTTCACATAAAAGAACAATACAGAAATTGTAGGCAGGTTTGGTAACCATTTGGTTTTTCATTTTTACTTTTGGAAAATTGTGGTTATAAACATTATTGTTTATATGTTTTGTTGAACTTTCTTATTCGTGATAAAACGAAAGAGTCTTGTGGCAAGCTTGTTTTTCTGCTATCTTATGGGGAGTGTAGCTTGAGAGGAATAGTAGAGATTGTAGGAGGTTGGAGAAGTCAATTGAAGAAGTGTGGGAGGTGGTGAGGTTTAATGCATCATTACATACGTTCTTTAATCAGACTTTCAGTAACTTTCAATTTTGTGTAATTCTTTTCGATTGGAATCTGTCTTTGAAGTTTGTTGTGGACTCATTTTATAGTCTTACTTTTCGTATGCCCTTCTACATTAACTCGGTTCCTTACCATAAAAATGAACATACTGAAATTAATCGAGAGAGTGATTCTAGTTCTTCCACTAACGTCCTCGTCATTTCTAAAAGCAGGGCCGGAGGCAGGTGAGGATTCGGATGCAGCAGAATGA

mRNA sequence

ATGGAAATGGATACAAATGGTATTTTCTTCTTTGCCACTGATCTCCAGCGGGAGTGGATAACGAAGCTATCCGCAGAACTAAGCTCCTCCATCGCACCAACAATGGCGGCCTCCACCACGCCATTGTCGCTCTCTTTCTTCACTTCATCCGTCTTCCTTTCTTCCCCCAACCTCCAAAATTCCAAGCTCTGCTGCAATTGGAAACCTAACTCCCTTAAACCCCAAACTAAACCCTTATCAATCTCCTCCGAGCTCGCTACTCTTCCAGTCCTCTCCTTCACTGGAGAAAAAGTCGGTGAAACCTACCTCGACCTAAAATCCGCTCCACCGGAAACCGCCCGCGCTGTCGTTCACCGAGCCATTATCACCGATCAACAGAACAAGCGCCGTGGGACCGCCTCGACTCTCACCAGAGCTGAGGTTAGTGGAGGCGGCAGAAAACCCTACCAGCAGAAGAAAACCGGGAAGGCTCGTCGCGGTTCGATGCGTACTCCTCTCCGGCCAGGTGGAGGGGTGGTCTTCGGGCCGAAACCTAGAGATTGGTCAATTAAGATCAACAGAAAGGAGAAGAGACTGGCAATATCGACAGCGGTGGCTAGTGCGGCGGTTAATACGATAGTGGTGGAGGATTTTGGGGACAAGTTCGAGAAGCCGAAAACTAAAGAATTCATCGCTGCGTTGAAGAGATGGGGAATCGATCCAAAGGAGAAATCATTGTTCTTAATGACGGAGGTTTCTGATAATGTCCGACTATCTAGCCGTAATATTGGAACGTTGAAGTTGTTGACGCCGAGGACGCTGAATTTGTTTGATATTTTGGATTCCGATAAGTTGGTTTTGACGCCGGCGGCGGTAGAATATCTGAATGAGAGATATGGAATTAATTACGAAGAAGGAATCGAAGATGAAGAAGAAGAAGGTGGAGAAGACGAAGAAGGGCCGGAGGCAGGTGAGGATTCGGATGCAGCAGAATGA

Coding sequence (CDS)

ATGGAAATGGATACAAATGGTATTTTCTTCTTTGCCACTGATCTCCAGCGGGAGTGGATAACGAAGCTATCCGCAGAACTAAGCTCCTCCATCGCACCAACAATGGCGGCCTCCACCACGCCATTGTCGCTCTCTTTCTTCACTTCATCCGTCTTCCTTTCTTCCCCCAACCTCCAAAATTCCAAGCTCTGCTGCAATTGGAAACCTAACTCCCTTAAACCCCAAACTAAACCCTTATCAATCTCCTCCGAGCTCGCTACTCTTCCAGTCCTCTCCTTCACTGGAGAAAAAGTCGGTGAAACCTACCTCGACCTAAAATCCGCTCCACCGGAAACCGCCCGCGCTGTCGTTCACCGAGCCATTATCACCGATCAACAGAACAAGCGCCGTGGGACCGCCTCGACTCTCACCAGAGCTGAGGTTAGTGGAGGCGGCAGAAAACCCTACCAGCAGAAGAAAACCGGGAAGGCTCGTCGCGGTTCGATGCGTACTCCTCTCCGGCCAGGTGGAGGGGTGGTCTTCGGGCCGAAACCTAGAGATTGGTCAATTAAGATCAACAGAAAGGAGAAGAGACTGGCAATATCGACAGCGGTGGCTAGTGCGGCGGTTAATACGATAGTGGTGGAGGATTTTGGGGACAAGTTCGAGAAGCCGAAAACTAAAGAATTCATCGCTGCGTTGAAGAGATGGGGAATCGATCCAAAGGAGAAATCATTGTTCTTAATGACGGAGGTTTCTGATAATGTCCGACTATCTAGCCGTAATATTGGAACGTTGAAGTTGTTGACGCCGAGGACGCTGAATTTGTTTGATATTTTGGATTCCGATAAGTTGGTTTTGACGCCGGCGGCGGTAGAATATCTGAATGAGAGATATGGAATTAATTACGAAGAAGGAATCGAAGATGAAGAAGAAGAAGGTGGAGAAGACGAAGAAGGGCCGGAGGCAGGTGAGGATTCGGATGCAGCAGAATGA

Protein sequence

MEMDTNGIFFFATDLQREWITKLSAELSSSIAPTMAASTTPLSLSFFTSSVFLSSPNLQNSKLCCNWKPNSLKPQTKPLSISSELATLPVLSFTGEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKTGKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDKFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILDSDKLVLTPAAVEYLNERYGINYEEGIEDEEEEGGEDEEGPEAGEDSDAAE
Homology
[Close]
BLAST of CmUC06G124030 vs. NCBI nr
Match: XP_038902816.1 (50S ribosomal protein L4, chloroplastic [Benincasa hispida])

HSP 1 Score: 520.4 bits (1339), Expect = 1.1e-143
Identity = 279/290 (96.21%), Postives = 280/290 (96.55%), Query Frame = 0 

Query: 35  MAASTTPLSLSFFTSSVFLSSPNLQNSKLCCNWKPNSLKPQTKPLSISSELATLPVLSFT 94
           MA ST+P SLSFFTSSVFLSSPN QNSKL CNWKPNSLKPQTKPLSISSELATLPVLSFT
Sbjct: 1   MATSTSPSSLSFFTSSVFLSSPNHQNSKLFCNWKPNSLKPQTKPLSISSELATLPVLSFT 60

Query: 95  GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 154
           GEKVGETYLDLKSAP ETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT
Sbjct: 61  GEKVGETYLDLKSAPQETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 120

Query: 155 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 214
           GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK
Sbjct: 121 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 180

Query: 215 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 274
           FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD
Sbjct: 181 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 240

Query: 275 SDKLVLTPAAVEYLNERYGINYEEGIEDEEEEGGEDEEGPEAGEDSDAAE 325
           SDKLVLTPAAVEYLNERYGINYEE    EEEEGG DEEGPEAGEDSDAAE
Sbjct: 241 SDKLVLTPAAVEYLNERYGINYEEA---EEEEGGADEEGPEAGEDSDAAE 287

[Close]
BLAST of CmUC06G124030 vs. NCBI nr
Match: KAE8646954.1 (hypothetical protein Csa_020647 [Cucumis sativus])

HSP 1 Score: 511.1 bits (1315), Expect = 6.8e-141
Identity = 279/320 (87.19%), Postives = 294/320 (91.88%), Query Frame = 0 

Query: 10  FFATDLQREWITK------LSAELSSSIAPTMAASTTPLSLSFFTSSVFLSSPNLQNSKL 69
           +FATDLQR+WIT        ++  SSS APTMA S +P SLSFFTSSVFLSSP+ QN  L
Sbjct: 19  YFATDLQRKWITSDIHREHNTSPRSSSFAPTMATSISPSSLSFFTSSVFLSSPSHQNLNL 78

Query: 70  CCNWKPNSLKPQTKPLSISSELATLPVLSFTGEKVGETYLDLKSAPPETARAVVHRAIIT 129
             N KPNSLKPQTK LSISSELATLPVLSFTG+KVGETYLDLKSAPPETARAVVHRAIIT
Sbjct: 79  FFNSKPNSLKPQTKTLSISSELATLPVLSFTGQKVGETYLDLKSAPPETARAVVHRAIIT 138

Query: 130 DQQNKRRGTASTLTRAEVSGGGRKPYQQKKTGKARRGSMRTPLRPGGGVVFGPKPRDWSI 189
           DQQNKRRGTASTLTRAEVSGGG+KPY+QKKTG+ARRGSMRTPLRPGGGVVFGPKPRDWSI
Sbjct: 139 DQQNKRRGTASTLTRAEVSGGGKKPYKQKKTGRARRGSMRTPLRPGGGVVFGPKPRDWSI 198

Query: 190 KINRKEKRLAISTAVASAAVNTIVVEDFGDKFEKPKTKEFIAALKRWGIDPKEKSLFLMT 249
           KINRKEK+LAISTAVASAAVNTIVVE+FGDKFEKPKTKEFIAALKRWGIDPKEKSLFLMT
Sbjct: 199 KINRKEKKLAISTAVASAAVNTIVVEEFGDKFEKPKTKEFIAALKRWGIDPKEKSLFLMT 258

Query: 250 EVSDNVRLSSRNIGTLKLLTPRTLNLFDILDSDKLVLTPAAVEYLNERYGINYEEGIEDE 309
           EVSDNVRLSSRNIGTLKLLTPRTLNLFDILDSDKLVLTP AV+YLNERYGINYEEGIE+ 
Sbjct: 259 EVSDNVRLSSRNIGTLKLLTPRTLNLFDILDSDKLVLTPTAVDYLNERYGINYEEGIEEG 318

Query: 310 EEEGGEDEEGPEAGEDSDAA 324
           EEE  E+EEG EAGEDSDAA
Sbjct: 319 EEE-EEEEEGVEAGEDSDAA 337

[Close]
BLAST of CmUC06G124030 vs. NCBI nr
Match: XP_022148353.1 (50S ribosomal protein L4, chloroplastic [Momordica charantia])

HSP 1 Score: 505.4 bits (1300), Expect = 3.7e-139
Identity = 274/296 (92.57%), Postives = 280/296 (94.59%), Query Frame = 0 

Query: 35  MAASTTPLSLSFFTSSVFLSSPNLQNSKLCCNWKPNSLKPQTKPLSISSELATLPVLSFT 94
           MA STTP SLSFFTSSVFLSS N QNSKL C+WKPNSLKPQTKPLSISS+LATLPVLSF 
Sbjct: 1   MATSTTPSSLSFFTSSVFLSSAN-QNSKLFCHWKPNSLKPQTKPLSISSQLATLPVLSFA 60

Query: 95  GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 154
           GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGG+KPYQQKKT
Sbjct: 61  GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGKKPYQQKKT 120

Query: 155 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 214
           GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK
Sbjct: 121 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 180

Query: 215 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 274
           FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD
Sbjct: 181 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 240

Query: 275 SDKLVLTPAAVEYLNERYGINYEEGIEDEEEE------GGEDEEGPEAGEDSDAAE 325
           SDK+VLTPAAV+YLNERYGINYE GIED+EEE      G E EEG EAGEDSDAAE
Sbjct: 241 SDKMVLTPAAVDYLNERYGINYEGGIEDDEEEEEEEQQGEEGEEGLEAGEDSDAAE 295

[Close]
BLAST of CmUC06G124030 vs. NCBI nr
Match: XP_008464054.1 (PREDICTED: 50S ribosomal protein L4, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 503.4 bits (1295), Expect = 1.4e-138
Identity = 273/291 (93.81%), Postives = 279/291 (95.88%), Query Frame = 0 

Query: 35  MAASTTPLSLSFFTSSVFLSSPNLQNSKLCCNWKPNSLKPQTKPLSISSELATLPVLSFT 94
           MAAST+P SLSFFTSSVFLSSP  QN  L  N KPNSLKPQTKPLSISSELATLPVLSFT
Sbjct: 1   MAASTSPSSLSFFTSSVFLSSPKHQNPNLFFNCKPNSLKPQTKPLSISSELATLPVLSFT 60

Query: 95  GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 154
           GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGG+KPYQQKKT
Sbjct: 61  GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGKKPYQQKKT 120

Query: 155 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 214
           GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVE+FGDK
Sbjct: 121 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEEFGDK 180

Query: 215 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 274
           FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD
Sbjct: 181 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 240

Query: 275 SDKLVLTPAAVEYLNERYGINYEEGI-EDEEEEGGEDEEGPEAGEDSDAAE 325
           SDKLVLTPAAV+YLNERYGINYEEGI E+EEEE  E+EEG EAGEDSDAAE
Sbjct: 241 SDKLVLTPAAVDYLNERYGINYEEGIEEEEEEEEEEEEEGVEAGEDSDAAE 291

[Close]
BLAST of CmUC06G124030 vs. NCBI nr
Match: XP_023532270.1 (50S ribosomal protein L4, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 501.9 bits (1291), Expect = 4.1e-138
Identity = 272/293 (92.83%), Postives = 280/293 (95.56%), Query Frame = 0 

Query: 35  MAASTTPLSLSFFTSSVFLSSPNLQNSKLCCNWKPNSLKPQTKPLSISSELATLPVLSFT 94
           MAASTTP SLSFF+SS+FLSS N QNSKL CNWKPNS KPQ+KPLSISS+LATLPVLSFT
Sbjct: 1   MAASTTPSSLSFFSSSIFLSSAN-QNSKLFCNWKPNSFKPQSKPLSISSQLATLPVLSFT 60

Query: 95  GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 154
           GEKVGET LDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT
Sbjct: 61  GEKVGETVLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 120

Query: 155 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 214
           GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK
Sbjct: 121 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 180

Query: 215 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 274
           FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDIL+
Sbjct: 181 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILN 240

Query: 275 SDKLVLTPAAVEYLNERYGINYEEGIEDEEEEGGED---EEGPEAGEDSDAAE 325
           SDKLVLTPAAV+YLNERYGINYEEGIEDEEEE  E+   EEG EAGE+ DAAE
Sbjct: 241 SDKLVLTPAAVDYLNERYGINYEEGIEDEEEEEEEELEGEEGLEAGEELDAAE 292

[Close]
BLAST of CmUC06G124030 vs. ExPASy Swiss-Prot
Match: O80361 (50S ribosomal protein L4, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL4 PE=2 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 1.1e-98
Identity = 197/282 (69.86%), Postives = 236/282 (83.69%), Query Frame = 0 

Query: 43  SLSFFTSSVFLSSPNLQNSKLCCNWKPNSLKPQTKPLSISSELATLPVLSFTGEKVGETY 102
           SLSFF+SS+FLS+PN+Q+SK      P  L       +I SE+AT+P+LSF G +VG T 
Sbjct: 4   SLSFFSSSIFLSNPNIQSSKHLLFRSPKQLS-VAAIATIRSEVATIPILSFDGAEVGSTT 63

Query: 103 LDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKTGKARRGSM 162
           L+LKSAP +TARAVVHR + TD +N+RRGTASTLTR+EV GGG KPY QKKTG+ARRGS 
Sbjct: 64  LNLKSAPLDTARAVVHRGLTTDLRNQRRGTASTLTRSEVRGGGIKPYPQKKTGRARRGSN 123

Query: 163 RTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDKFEKPKTKE 222
           RTPLRPGGGVVFGPKP+DWS+KIN+KEKRLAISTA++SA+ NTIVVE+F DKFEKPKTKE
Sbjct: 124 RTPLRPGGGVVFGPKPKDWSVKINKKEKRLAISTALSSASENTIVVEEFNDKFEKPKTKE 183

Query: 223 FIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILDSDKLVLTP 282
           FI  ++RWG+DPKEKSLFLMT+VSDNV LSSRNIGTLK+LTPRTLNLFDILDS+KLVLT 
Sbjct: 184 FIDLMRRWGLDPKEKSLFLMTDVSDNVILSSRNIGTLKMLTPRTLNLFDILDSEKLVLTK 243

Query: 283 AAVEYLNERYGINYEEGIEDEEEEGGEDEEGPEAGEDSDAAE 325
           +AV++LNERYG   E   EDEEE+  ED +G EA E ++++E
Sbjct: 244 SAVDFLNERYG--DENEWEDEEEDDQEDNDGGEAEESTESSE 282

[Close]
BLAST of CmUC06G124030 vs. ExPASy Swiss-Prot
Match: O50061 (50S ribosomal protein L4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL4 PE=2 SV=2)

HSP 1 Score: 359.8 bits (922), Expect = 3.3e-98
Identity = 194/280 (69.29%), Postives = 234/280 (83.57%), Query Frame = 0 

Query: 36  AASTTPLSLSFFTSSVFLSSPNLQNSKLCCNWKPNSLKPQTKPLSISSELATLPVLSFTG 95
           +++T P SLSFF+SS+FLSS + Q  K   +         +KPLS+SS+LATLP+LSF G
Sbjct: 3   SSATAPNSLSFFSSSLFLSSSH-QIPKTYISVSKLGSGRVSKPLSVSSQLATLPILSFEG 62

Query: 96  EKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKTG 155
           EKVGETYLDLK+AP +TARAVVHRAI+TD  NKRRGTASTLTR EV GGG KPY QKKTG
Sbjct: 63  EKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTASTLTRGEVRGGGIKPYSQKKTG 122

Query: 156 KARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAV---NTIVVEDFG 215
            ARRGS RTPLRPGGGVVFGP+P+DWSIKINRKEK+LAISTA++SAA      IVVE+FG
Sbjct: 123 HARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAISTALSSAASAEGGAIVVEEFG 182

Query: 216 DKFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDI 275
           +KFEKPKTK+F+AA++RWG+DPKEK++FLM +V +NV  SSRNIGTL++LTPRTLNLFDI
Sbjct: 183 EKFEKPKTKDFLAAMQRWGLDPKEKAMFLMIDVDENVAKSSRNIGTLRMLTPRTLNLFDI 242

Query: 276 LDSDKLVLTPAAVEYLNERYGIN-YEEGIEDEEEEGGEDE 312
           L++DKLVLTPAAVE+LN RYG++  EE  +DE+E  G +E
Sbjct: 243 LNADKLVLTPAAVEFLNARYGVDAVEEEDDDEDETEGSEE 281

[Close]
BLAST of CmUC06G124030 vs. ExPASy Swiss-Prot
Match: O49937 (50S ribosomal protein L4, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL4 PE=1 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 6.7e-91
Identity = 179/285 (62.81%), Postives = 226/285 (79.30%), Query Frame = 0 

Query: 35  MAAST-TPLSLSFFTSSVFLSSPNLQNSKLCCNWKPNSLKPQTKPLSISSELATLPVLSF 94
           MA ST + LSLSFF+SS+F S     +SK       +S    +  LSI SEL  LP+L+F
Sbjct: 1   MATSTSSSLSLSFFSSSLFSSKSRNFSSKPILKLPSSSHSQTSLSLSIKSELIPLPILNF 60

Query: 95  TGEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKK 154
           +GEKVGET+L+LK+APPE ARAVVHR +IT  QNKRRGTASTLTRAEV GGGRKPY QKK
Sbjct: 61  SGEKVGETFLNLKTAPPEKARAVVHRGLITHLQNKRRGTASTLTRAEVRGGGRKPYPQKK 120

Query: 155 TGKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGD 214
           TG+ARRGS  +PLRPGGGV+FGPKPRDW+IK+N+KE+RLA+STA+ASA  N+ VVE+F +
Sbjct: 121 TGRARRGSQGSPLRPGGGVIFGPKPRDWTIKMNKKERRLALSTAIASAVGNSFVVEEFAE 180

Query: 215 KFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDIL 274
            FEKPKTK+FIAA++RWG+DP EKSLF + ++ +NV  S RNI TLKLLTPR+LNLFD+L
Sbjct: 181 NFEKPKTKDFIAAMQRWGLDPAEKSLFFLMDLVENVEKSGRNIRTLKLLTPRSLNLFDVL 240

Query: 275 DSDKLVLTPAAVEYLNERYGINYEEGIEDEEEEGGEDEEGPEAGE 319
           +++KLV T   ++YLN+RYG+   + +EDE+EE  E+EEG E  +
Sbjct: 241 NAEKLVFTEGTIQYLNQRYGV---DTLEDEDEEEEEEEEGEEVDD 282

[Close]
BLAST of CmUC06G124030 vs. ExPASy Swiss-Prot
Match: Q8DMN0 (50S ribosomal protein L4 OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=rplD PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 5.4e-56
Identity = 110/204 (53.92%), Postives = 148/204 (72.55%), Query Frame = 0 

Query: 90  VLSFTGEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPY 149
           V  + G   GE  LDL +A PETA  +VHRA++    N R+GT ST TRAEV GGGRKP+
Sbjct: 6   VKDWQGADSGEATLDLATAKPETASHIVHRALVRQLANARQGTVSTKTRAEVRGGGRKPW 65

Query: 150 QQKKTGKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVE 209
           +QK TG+AR GS+R+PL  GGGV+FGPKPRD+S K+NRKE+RLA+ TA+ S   + IVV+
Sbjct: 66  RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDYSQKMNRKERRLALRTALMSRVEDLIVVQ 125

Query: 210 DFGDKFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNL 269
           DF D   +PKTKE + AL+RWGI+P++K L L  ++++ V LS+RN+ TLKLL    LN+
Sbjct: 126 DFADHLPRPKTKELVTALQRWGIEPEQKVLLLAADITETVALSARNVPTLKLLRADQLNV 185

Query: 270 FDILDSDKLVLTPAAVEYLNERYG 294
           FD+L +D++V T  A+  + E YG
Sbjct: 186 FDLLYADRIVATTGAIAKIQEVYG 209

[Close]
BLAST of CmUC06G124030 vs. ExPASy Swiss-Prot
Match: B0JI02 (50S ribosomal protein L4 OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=rplD PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.0e-55
Identity = 106/204 (51.96%), Postives = 152/204 (74.51%), Query Frame = 0 

Query: 90  VLSFTGEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPY 149
           V ++ GE+ G   L+LK+A PETA+ ++HR +++     R+G AS+ TR+EV GGGRKP+
Sbjct: 6   VKNWQGEEAGTGTLELKTAKPETAKHLIHRVVVSHLAAARQGNASSKTRSEVRGGGRKPW 65

Query: 150 QQKKTGKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVE 209
           +QK TG+AR GS+R+PL  GGGV+FGPKPRD+ +K+NRKEKRLA+ TA+ S A N IVVE
Sbjct: 66  RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFEVKVNRKEKRLALRTALISQADNFIVVE 125

Query: 210 DFGDKFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNL 269
            F ++F +PKTKE  AAL RWG  P+EK L ++TE+ +NV LS RNI  LK++   +LN+
Sbjct: 126 SFAEQFSQPKTKELTAALSRWGASPEEKILLILTEIPENVYLSGRNICNLKIIRADSLNV 185

Query: 270 FDILDSDKLVLTPAAVEYLNERYG 294
           +D++ +D+++ T AA+  + E YG
Sbjct: 186 YDVILADRVIATAAALAKIEEVYG 209

[Close]
BLAST of CmUC06G124030 vs. ExPASy TrEMBL
Match: A0A0A0KFB8 (PPIase cyclophilin-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G187950 PE=3 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 3.3e-141
Identity = 279/320 (87.19%), Postives = 294/320 (91.88%), Query Frame = 0 

Query: 10  FFATDLQREWITK------LSAELSSSIAPTMAASTTPLSLSFFTSSVFLSSPNLQNSKL 69
           +FATDLQR+WIT        ++  SSS APTMA S +P SLSFFTSSVFLSSP+ QN  L
Sbjct: 124 YFATDLQRKWITSDIHREHNTSPRSSSFAPTMATSISPSSLSFFTSSVFLSSPSHQNLNL 183

Query: 70  CCNWKPNSLKPQTKPLSISSELATLPVLSFTGEKVGETYLDLKSAPPETARAVVHRAIIT 129
             N KPNSLKPQTK LSISSELATLPVLSFTG+KVGETYLDLKSAPPETARAVVHRAIIT
Sbjct: 184 FFNSKPNSLKPQTKTLSISSELATLPVLSFTGQKVGETYLDLKSAPPETARAVVHRAIIT 243

Query: 130 DQQNKRRGTASTLTRAEVSGGGRKPYQQKKTGKARRGSMRTPLRPGGGVVFGPKPRDWSI 189
           DQQNKRRGTASTLTRAEVSGGG+KPY+QKKTG+ARRGSMRTPLRPGGGVVFGPKPRDWSI
Sbjct: 244 DQQNKRRGTASTLTRAEVSGGGKKPYKQKKTGRARRGSMRTPLRPGGGVVFGPKPRDWSI 303

Query: 190 KINRKEKRLAISTAVASAAVNTIVVEDFGDKFEKPKTKEFIAALKRWGIDPKEKSLFLMT 249
           KINRKEK+LAISTAVASAAVNTIVVE+FGDKFEKPKTKEFIAALKRWGIDPKEKSLFLMT
Sbjct: 304 KINRKEKKLAISTAVASAAVNTIVVEEFGDKFEKPKTKEFIAALKRWGIDPKEKSLFLMT 363

Query: 250 EVSDNVRLSSRNIGTLKLLTPRTLNLFDILDSDKLVLTPAAVEYLNERYGINYEEGIEDE 309
           EVSDNVRLSSRNIGTLKLLTPRTLNLFDILDSDKLVLTP AV+YLNERYGINYEEGIE+ 
Sbjct: 364 EVSDNVRLSSRNIGTLKLLTPRTLNLFDILDSDKLVLTPTAVDYLNERYGINYEEGIEEG 423

Query: 310 EEEGGEDEEGPEAGEDSDAA 324
           EEE  E+EEG EAGEDSDAA
Sbjct: 424 EEE-EEEEEGVEAGEDSDAA 442

[Close]
BLAST of CmUC06G124030 vs. ExPASy TrEMBL
Match: A0A6J1D3V7 (50S ribosomal protein L4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111017027 PE=3 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 1.8e-139
Identity = 274/296 (92.57%), Postives = 280/296 (94.59%), Query Frame = 0 

Query: 35  MAASTTPLSLSFFTSSVFLSSPNLQNSKLCCNWKPNSLKPQTKPLSISSELATLPVLSFT 94
           MA STTP SLSFFTSSVFLSS N QNSKL C+WKPNSLKPQTKPLSISS+LATLPVLSF 
Sbjct: 1   MATSTTPSSLSFFTSSVFLSSAN-QNSKLFCHWKPNSLKPQTKPLSISSQLATLPVLSFA 60

Query: 95  GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 154
           GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGG+KPYQQKKT
Sbjct: 61  GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGKKPYQQKKT 120

Query: 155 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 214
           GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK
Sbjct: 121 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 180

Query: 215 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 274
           FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD
Sbjct: 181 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 240

Query: 275 SDKLVLTPAAVEYLNERYGINYEEGIEDEEEE------GGEDEEGPEAGEDSDAAE 325
           SDK+VLTPAAV+YLNERYGINYE GIED+EEE      G E EEG EAGEDSDAAE
Sbjct: 241 SDKMVLTPAAVDYLNERYGINYEGGIEDDEEEEEEEQQGEEGEEGLEAGEDSDAAE 295

[Close]
BLAST of CmUC06G124030 vs. ExPASy TrEMBL
Match: A0A1S3CM35 (50S ribosomal protein L4, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502034 PE=3 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 6.9e-139
Identity = 273/291 (93.81%), Postives = 279/291 (95.88%), Query Frame = 0 

Query: 35  MAASTTPLSLSFFTSSVFLSSPNLQNSKLCCNWKPNSLKPQTKPLSISSELATLPVLSFT 94
           MAAST+P SLSFFTSSVFLSSP  QN  L  N KPNSLKPQTKPLSISSELATLPVLSFT
Sbjct: 1   MAASTSPSSLSFFTSSVFLSSPKHQNPNLFFNCKPNSLKPQTKPLSISSELATLPVLSFT 60

Query: 95  GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 154
           GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGG+KPYQQKKT
Sbjct: 61  GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGKKPYQQKKT 120

Query: 155 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 214
           GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVE+FGDK
Sbjct: 121 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEEFGDK 180

Query: 215 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 274
           FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD
Sbjct: 181 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 240

Query: 275 SDKLVLTPAAVEYLNERYGINYEEGI-EDEEEEGGEDEEGPEAGEDSDAAE 325
           SDKLVLTPAAV+YLNERYGINYEEGI E+EEEE  E+EEG EAGEDSDAAE
Sbjct: 241 SDKLVLTPAAVDYLNERYGINYEEGIEEEEEEEEEEEEEGVEAGEDSDAAE 291

[Close]
BLAST of CmUC06G124030 vs. ExPASy TrEMBL
Match: A0A1S3CL27 (50S ribosomal protein L4, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502034 PE=3 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 3.4e-138
Identity = 273/297 (91.92%), Postives = 279/297 (93.94%), Query Frame = 0 

Query: 35  MAASTTPLSLSFFTSSVFLSSPNLQNSKLCCNWKPNSLKPQTKPLSISSELATLPVLSFT 94
           MAAST+P SLSFFTSSVFLSSP  QN  L  N KPNSLKPQTKPLSISSELATLPVLSFT
Sbjct: 1   MAASTSPSSLSFFTSSVFLSSPKHQNPNLFFNCKPNSLKPQTKPLSISSELATLPVLSFT 60

Query: 95  GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 154
           GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGG+KPYQQKKT
Sbjct: 61  GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGKKPYQQKKT 120

Query: 155 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 214
           GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVE+FGDK
Sbjct: 121 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEEFGDK 180

Query: 215 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 274
           FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD
Sbjct: 181 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 240

Query: 275 SDKLVLTPAAVEYLNERYGINYEEGI-------EDEEEEGGEDEEGPEAGEDSDAAE 325
           SDKLVLTPAAV+YLNERYGINYEEGI       E+EEEE  E+EEG EAGEDSDAAE
Sbjct: 241 SDKLVLTPAAVDYLNERYGINYEEGIEEEEEEEEEEEEEEEEEEEGVEAGEDSDAAE 297

[Close]
BLAST of CmUC06G124030 vs. ExPASy TrEMBL
Match: A0A6J1G917 (50S ribosomal protein L4, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451819 PE=3 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 5.8e-138
Identity = 271/293 (92.49%), Postives = 279/293 (95.22%), Query Frame = 0 

Query: 35  MAASTTPLSLSFFTSSVFLSSPNLQNSKLCCNWKPNSLKPQTKPLSISSELATLPVLSFT 94
           MAAST P SLSFF+SS+FLSS N QNSKL CNWKPNS KPQ+KPLSISS+LATLPVLSFT
Sbjct: 1   MAASTAPSSLSFFSSSIFLSSAN-QNSKLFCNWKPNSFKPQSKPLSISSQLATLPVLSFT 60

Query: 95  GEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 154
           GEKVGET LDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT
Sbjct: 61  GEKVGETVLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKT 120

Query: 155 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 214
           GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK
Sbjct: 121 GKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDK 180

Query: 215 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILD 274
           FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDIL+
Sbjct: 181 FEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILN 240

Query: 275 SDKLVLTPAAVEYLNERYGINYEEGIEDEEEEGGED---EEGPEAGEDSDAAE 325
           SDKLVLTPAAV+YLNERYGINYEEGIEDEEEE  E+   EEG +AGED DAAE
Sbjct: 241 SDKLVLTPAAVDYLNERYGINYEEGIEDEEEEEEEELEGEEGLDAGEDLDAAE 292

[Close]
BLAST of CmUC06G124030 vs. TAIR 10
Match: AT1G07320.3 (ribosomal protein L4 )

HSP 1 Score: 360.9 bits (925), Expect = 1.1e-99
Identity = 191/274 (69.71%), Postives = 231/274 (84.31%), Query Frame = 0 

Query: 36  AASTTPLSLSFFTSSVFLSSPNLQNSKLCCNWKPNSLKPQTKPLSISSELATLPVLSFTG 95
           +++T P SLSFF+SS+FLSS + Q  K   +         +KPLS+SS+LATLP+LSF G
Sbjct: 3   SSATAPNSLSFFSSSLFLSSSH-QIPKTYISVSKLGSGRVSKPLSVSSQLATLPILSFEG 62

Query: 96  EKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKTG 155
           EKVGETYLDLK+AP +TARAVVHRAI+TD  NKRRGTASTLTR EV GGG KPY QKKTG
Sbjct: 63  EKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTASTLTRGEVRGGGIKPYSQKKTG 122

Query: 156 KARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAV---NTIVVEDFG 215
            ARRGS RTPLRPGGGVVFGP+P+DWSIKINRKEK+LAISTA++SAA      IVVE+FG
Sbjct: 123 HARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAISTALSSAASAEGGAIVVEEFG 182

Query: 216 DKFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDI 275
           +KFEKPKTK+F+AA++RWG+DPKEK++FLM +V +NV  SSRNIGTL++LTPRTLNLFDI
Sbjct: 183 EKFEKPKTKDFLAAMQRWGLDPKEKAMFLMIDVDENVAKSSRNIGTLRMLTPRTLNLFDI 242

Query: 276 LDSDKLVLTPAAVEYLNERYGINYEEGIEDEEEE 307
           L++DKLVLTPAAVE+LN RYG++  E  +D+E+E
Sbjct: 243 LNADKLVLTPAAVEFLNARYGVDAVEEEDDDEDE 275

[Close]
BLAST of CmUC06G124030 vs. TAIR 10
Match: AT1G07320.4 (ribosomal protein L4 )

HSP 1 Score: 360.9 bits (925), Expect = 1.1e-99
Identity = 191/274 (69.71%), Postives = 231/274 (84.31%), Query Frame = 0 

Query: 36  AASTTPLSLSFFTSSVFLSSPNLQNSKLCCNWKPNSLKPQTKPLSISSELATLPVLSFTG 95
           +++T P SLSFF+SS+FLSS + Q  K   +         +KPLS+SS+LATLP+LSF G
Sbjct: 3   SSATAPNSLSFFSSSLFLSSSH-QIPKTYISVSKLGSGRVSKPLSVSSQLATLPILSFEG 62

Query: 96  EKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKTG 155
           EKVGETYLDLK+AP +TARAVVHRAI+TD  NKRRGTASTLTR EV GGG KPY QKKTG
Sbjct: 63  EKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTASTLTRGEVRGGGIKPYSQKKTG 122

Query: 156 KARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAV---NTIVVEDFG 215
            ARRGS RTPLRPGGGVVFGP+P+DWSIKINRKEK+LAISTA++SAA      IVVE+FG
Sbjct: 123 HARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAISTALSSAASAEGGAIVVEEFG 182

Query: 216 DKFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDI 275
           +KFEKPKTK+F+AA++RWG+DPKEK++FLM +V +NV  SSRNIGTL++LTPRTLNLFDI
Sbjct: 183 EKFEKPKTKDFLAAMQRWGLDPKEKAMFLMIDVDENVAKSSRNIGTLRMLTPRTLNLFDI 242

Query: 276 LDSDKLVLTPAAVEYLNERYGINYEEGIEDEEEE 307
           L++DKLVLTPAAVE+LN RYG++  E  +D+E+E
Sbjct: 243 LNADKLVLTPAAVEFLNARYGVDAVEEEDDDEDE 275

[Close]
BLAST of CmUC06G124030 vs. TAIR 10
Match: AT1G07320.2 (ribosomal protein L4 )

HSP 1 Score: 360.1 bits (923), Expect = 1.8e-99
Identity = 192/278 (69.06%), Postives = 233/278 (83.81%), Query Frame = 0 

Query: 36  AASTTPLSLSFFTSSVFLSSPNLQNSKLCCNWKPNSLKPQTKPLSISSELATLPVLSFTG 95
           +++T P SLSFF+SS+FLSS + Q  K   +         +KPLS+SS+LATLP+LSF G
Sbjct: 3   SSATAPNSLSFFSSSLFLSSSH-QIPKTYISVSKLGSGRVSKPLSVSSQLATLPILSFEG 62

Query: 96  EKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKTG 155
           EKVGETYLDLK+AP +TARAVVHRAI+TD  NKRRGTASTLTR EV GGG KPY QKKTG
Sbjct: 63  EKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTASTLTRGEVRGGGIKPYSQKKTG 122

Query: 156 KARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAV---NTIVVEDFG 215
            ARRGS RTPLRPGGGVVFGP+P+DWSIKINRKEK+LAISTA++SAA      IVVE+FG
Sbjct: 123 HARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAISTALSSAASAEGGAIVVEEFG 182

Query: 216 DKFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDI 275
           +KFEKPKTK+F+AA++RWG+DPKEK++FLM +V +NV  SSRNIGTL++LTPRTLNLFDI
Sbjct: 183 EKFEKPKTKDFLAAMQRWGLDPKEKAMFLMIDVDENVAKSSRNIGTLRMLTPRTLNLFDI 242

Query: 276 LDSDKLVLTPAAVEYLNERYGINYEEGIEDEEEEGGED 311
           L++DKLVLTPAAVE+LN RYG++  E  +D+E+E  E+
Sbjct: 243 LNADKLVLTPAAVEFLNARYGVDAVEEEDDDEDETEEE 279

[Close]
BLAST of CmUC06G124030 vs. TAIR 10
Match: AT1G07320.1 (ribosomal protein L4 )

HSP 1 Score: 359.8 bits (922), Expect = 2.4e-99
Identity = 194/280 (69.29%), Postives = 234/280 (83.57%), Query Frame = 0 

Query: 36  AASTTPLSLSFFTSSVFLSSPNLQNSKLCCNWKPNSLKPQTKPLSISSELATLPVLSFTG 95
           +++T P SLSFF+SS+FLSS + Q  K   +         +KPLS+SS+LATLP+LSF G
Sbjct: 3   SSATAPNSLSFFSSSLFLSSSH-QIPKTYISVSKLGSGRVSKPLSVSSQLATLPILSFEG 62

Query: 96  EKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGRKPYQQKKTG 155
           EKVGETYLDLK+AP +TARAVVHRAI+TD  NKRRGTASTLTR EV GGG KPY QKKTG
Sbjct: 63  EKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTASTLTRGEVRGGGIKPYSQKKTG 122

Query: 156 KARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVASAAV---NTIVVEDFG 215
            ARRGS RTPLRPGGGVVFGP+P+DWSIKINRKEK+LAISTA++SAA      IVVE+FG
Sbjct: 123 HARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAISTALSSAASAEGGAIVVEEFG 182

Query: 216 DKFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDI 275
           +KFEKPKTK+F+AA++RWG+DPKEK++FLM +V +NV  SSRNIGTL++LTPRTLNLFDI
Sbjct: 183 EKFEKPKTKDFLAAMQRWGLDPKEKAMFLMIDVDENVAKSSRNIGTLRMLTPRTLNLFDI 242

Query: 276 LDSDKLVLTPAAVEYLNERYGIN-YEEGIEDEEEEGGEDE 312
           L++DKLVLTPAAVE+LN RYG++  EE  +DE+E  G +E
Sbjct: 243 LNADKLVLTPAAVEFLNARYGVDAVEEEDDDEDETEGSEE 281

[Close]
BLAST of CmUC06G124030 vs. TAIR 10
Match: AT2G20060.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 92.4 bits (228), Expect = 7.0e-19
Identity = 78/278 (28.06%), Postives = 139/278 (50.00%), Query Frame = 0 

Query: 27  LSSSIAPTMAASTTPLSLSFFTSSVFLSSPNLQNSKLCCN-WKPNSLKPQ---TKPLSIS 86
           L  S +P ++A+T+   L+  T+ +      L N KL  +   P+   P    TK   ++
Sbjct: 19  LGRSSSPNLSANTSGNGLASLTNDLKYGMALLSNRKLSTSILTPDDSFPSDLLTKKTVLT 78

Query: 87  SELA-------TLPVLSFTGEKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTAST 146
            +          +PV +F  E+ G   L          + ++H  +      +++GT ST
Sbjct: 79  PDRTIGQYQDLVIPVTNFQNEEKGFMVLAGDVFDVPIRKDIIHNVVRWQLAKRQQGTHST 138

Query: 147 LTRAEVSGGGRKPYQQKKTGKARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAIS 206
            T +EVSG GRKP+ QK TG+AR G++R P   GG V+ GPKPR  +IK+N++ +RL + 
Sbjct: 139 KTLSEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGCVMHGPKPRSHAIKMNKQVRRLGLK 198

Query: 207 TAVASAAV--NTIVVEDFGDKFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSS 266
            A+ + A     +V +D G      KTK  +    +   + K+  +     + + ++L++
Sbjct: 199 IALTARAAEGKLLVFDDLG--LPTHKTKNIVNYYNQME-NTKKVLVVEGGPIDEKLKLAT 258

Query: 267 RNIGTLKLLTPRTLNLFDILDSDKLVLTPAAVEYLNER 292
           +N+  + ++    LN++ IL  D L+++  AV  + ER
Sbjct: 259 QNLHYVNIIPSIGLNVYSILLHDTLLMSRDAVNKIVER 293

The following BLAST results are available for this feature:
BLAST of CmUC06G124030 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038902816.11.1e-14396.2150S ribosomal protein L4, chloroplastic [Benincasa hispida][more]
KAE8646954.16.8e-14187.19hypothetical protein Csa_020647 [Cucumis sativus][more]
XP_022148353.13.7e-13992.5750S ribosomal protein L4, chloroplastic [Momordica charantia][more]
XP_008464054.11.4e-13893.81PREDICTED: 50S ribosomal protein L4, chloroplastic isoform X2 [Cucumis melo][more]
XP_023532270.14.1e-13892.8350S ribosomal protein L4, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
BLAST of CmUC06G124030 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O803611.1e-9869.8650S ribosomal protein L4, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL4 PE=... [more]
O500613.3e-9869.2950S ribosomal protein L4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL4 ... [more]
O499376.7e-9162.8150S ribosomal protein L4, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL4 PE=... [more]
Q8DMN05.4e-5653.9250S ribosomal protein L4 OS=Thermosynechococcus elongatus (strain BP-1) OX=19722... [more]
B0JI022.0e-5551.9650S ribosomal protein L4 OS=Microcystis aeruginosa (strain NIES-843) OX=449447 G... [more]
BLAST of CmUC06G124030 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFB83.3e-14187.19PPIase cyclophilin-type domain-containing protein OS=Cucumis sativus OX=3659 GN=... [more]
A0A6J1D3V71.8e-13992.5750S ribosomal protein L4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A1S3CM356.9e-13993.8150S ribosomal protein L4, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LO... [more]
A0A1S3CL273.4e-13891.9250S ribosomal protein L4, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LO... [more]
A0A6J1G9175.8e-13892.4950S ribosomal protein L4, chloroplastic-like isoform X1 OS=Cucurbita moschata OX... [more]
BLAST of CmUC06G124030 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G07320.31.1e-9969.71ribosomal protein L4 [more]
AT1G07320.41.1e-9969.71ribosomal protein L4 [more]
AT1G07320.21.8e-9969.06ribosomal protein L4 [more]
AT1G07320.12.4e-9969.29ribosomal protein L4 [more]
AT2G20060.17.0e-1928.06Ribosomal protein L4/L1 family [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR01300550S ribosomal protein uL4TIGRFAMTIGR03953TIGR03953coord: 111..290
e-value: 1.0E-57
score: 192.5
IPR01300550S ribosomal protein uL4PANTHERPTHR1074650S RIBOSOMAL PROTEIN L4coord: 29..306
IPR01300550S ribosomal protein uL4HAMAPMF_01328_BRibosomal_L4_Bcoord: 93..293
score: 29.579786
IPR023574Ribosomal protein L4 domain superfamilyGENE3D3.40.1370.10coord: 72..300
e-value: 2.9E-61
score: 208.5
IPR023574Ribosomal protein L4 domain superfamilySUPERFAMILY52166Ribosomal protein L4coord: 87..293
IPR002136Ribosomal protein L4/L1ePFAMPF00573Ribosomal_L4coord: 112..291
e-value: 5.2E-54
score: 182.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 296..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..171
NoneNo IPR availablePANTHERPTHR10746:SF639S RIBOSOMAL PROTEIN L4, MITOCHONDRIALcoord: 29..306

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC06G124030.1CmUC06G124030.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome