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CmUC06G122950 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGGCATCAAGAGTTGGGATGATATTGATGACAATAGGAGTGATATTATTGATATCAAAATCAGATGTAGTAGTCATGGTGGAAGGAGCAGAAGTGAGCTGCAACCCAATGCAAATGAGCTCTTGTATGAACTCAATCATATCAGGAACTCCACCATCAAAGCAGTGCTGCAGCAAGATCAAAGAGCAGAGGCCCTGCCTCTGTGGTTACCTCAAAAACCCTTTTCTTAAGAACTTTGTTGATTCCCCAAATGCAAGAAAAGTAGCCACTGACTGTGGAACTCCTTTCCCAACTTGCTGA ATGAGGGCATCAAGAGTTGGGATGATATTGATGACAATAGGAGTGATATTATTGATATCAAAATCAGATGTAGTAGTCATGGTGGAAGGAGCAGAAGTGAGCTGCAACCCAATGCAAATGAGCTCTTGTATGAACTCAATCATATCAGGAACTCCACCATCAAAGCAGTGCTGCAGCAAGATCAAAGAGCAGAGGCCCTGCCTCTGTGGTTACCTCAAAAACCCTTTTCTTAAGAACTTTGTTGATTCCCCAAATGCAAGAAAAGTAGCCACTGACTGTGGAACTCCTTTCCCAACTTGCTGA ATGAGGGCATCAAGAGTTGGGATGATATTGATGACAATAGGAGTGATATTATTGATATCAAAATCAGATGTAGTAGTCATGGTGGAAGGAGCAGAAGTGAGCTGCAACCCAATGCAAATGAGCTCTTGTATGAACTCAATCATATCAGGAACTCCACCATCAAAGCAGTGCTGCAGCAAGATCAAAGAGCAGAGGCCCTGCCTCTGTGGTTACCTCAAAAACCCTTTTCTTAAGAACTTTGTTGATTCCCCAAATGCAAGAAAAGTAGCCACTGACTGTGGAACTCCTTTCCCAACTTGCTGA MRASRVGMILMTIGVILLISKSDVVVMVEGAEVSCNPMQMSSCMNSIISGTPPSKQCCSKIKEQRPCLCGYLKNPFLKNFVDSPNARKVATDCGTPFPTC Homology
BLAST of CmUC06G122950 vs. NCBI nr
Match: TYK28448.1 (non-specific lipid-transfer protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 165.2 bits (417), Expect = 2.8e-37 Identity = 81/101 (80.20%), Postives = 90/101 (89.11%), Query Frame = 0
BLAST of CmUC06G122950 vs. NCBI nr
Match: XP_008453433.1 (PREDICTED: non-specific lipid-transfer protein 2 [Cucumis melo] >KAA0058095.1 non-specific lipid-transfer protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 163.7 bits (413), Expect = 8.2e-37 Identity = 80/101 (79.21%), Postives = 89/101 (88.12%), Query Frame = 0
BLAST of CmUC06G122950 vs. NCBI nr
Match: XP_011648973.1 (non-specific lipid-transfer protein 2 [Cucumis sativus] >KGN63840.1 hypothetical protein Csa_013835 [Cucumis sativus]) HSP 1 Score: 159.8 bits (403), Expect = 1.2e-35 Identity = 78/101 (77.23%), Postives = 89/101 (88.12%), Query Frame = 0
BLAST of CmUC06G122950 vs. NCBI nr
Match: XP_023530164.1 (non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 138.3 bits (347), Expect = 3.7e-29 Identity = 68/100 (68.00%), Postives = 84/100 (84.00%), Query Frame = 0
BLAST of CmUC06G122950 vs. NCBI nr
Match: XP_022933706.1 (non-specific lipid-transfer protein 2-like [Cucurbita moschata] >XP_023001764.1 non-specific lipid-transfer protein 2 [Cucurbita maxima] >KAG7021625.1 hypothetical protein SDJN02_15351, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 136.7 bits (343), Expect = 1.1e-28 Identity = 67/100 (67.00%), Postives = 83/100 (83.00%), Query Frame = 0
BLAST of CmUC06G122950 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.5e-20 Identity = 40/68 (58.82%), Postives = 53/68 (77.94%), Query Frame = 0
BLAST of CmUC06G122950 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.2e-17 Identity = 42/96 (43.75%), Postives = 64/96 (66.67%), Query Frame = 0
BLAST of CmUC06G122950 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.5e-17 Identity = 36/61 (59.02%), Postives = 49/61 (80.33%), Query Frame = 0
BLAST of CmUC06G122950 vs. ExPASy Swiss-Prot
Match: P20145 (Probable non-specific lipid-transfer protein OS=Hordeum vulgare OX=4513 GN=LTP2 PE=2 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 8.6e-13 Identity = 34/91 (37.36%), Postives = 54/91 (59.34%), Query Frame = 0
BLAST of CmUC06G122950 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2) HSP 1 Score: 69.7 bits (169), Expect = 2.1e-11 Identity = 34/93 (36.56%), Postives = 53/93 (56.99%), Query Frame = 0
BLAST of CmUC06G122950 vs. ExPASy TrEMBL
Match: A0A5D3DYC3 (Non-specific lipid-transfer protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00800 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.4e-37 Identity = 81/101 (80.20%), Postives = 90/101 (89.11%), Query Frame = 0
BLAST of CmUC06G122950 vs. ExPASy TrEMBL
Match: A0A5A7UWV2 (Non-specific lipid-transfer protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004030 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 4.0e-37 Identity = 80/101 (79.21%), Postives = 89/101 (88.12%), Query Frame = 0
BLAST of CmUC06G122950 vs. ExPASy TrEMBL
Match: A0A1S3BXE4 (non-specific lipid-transfer protein 2 OS=Cucumis melo OX=3656 GN=LOC103494141 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 4.0e-37 Identity = 80/101 (79.21%), Postives = 89/101 (88.12%), Query Frame = 0
BLAST of CmUC06G122950 vs. ExPASy TrEMBL
Match: A0A0A0LPL9 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G024245 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 5.7e-36 Identity = 78/101 (77.23%), Postives = 89/101 (88.12%), Query Frame = 0
BLAST of CmUC06G122950 vs. ExPASy TrEMBL
Match: A0A6J1KNL1 (non-specific lipid-transfer protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111495805 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 5.2e-29 Identity = 67/100 (67.00%), Postives = 83/100 (83.00%), Query Frame = 0
BLAST of CmUC06G122950 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 98.6 bits (244), Expect = 3.0e-21 Identity = 44/96 (45.83%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of CmUC06G122950 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 95.9 bits (237), Expect = 2.0e-20 Identity = 43/89 (48.31%), Postives = 64/89 (71.91%), Query Frame = 0
BLAST of CmUC06G122950 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 95.9 bits (237), Expect = 2.0e-20 Identity = 40/91 (43.96%), Postives = 65/91 (71.43%), Query Frame = 0
BLAST of CmUC06G122950 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 88.6 bits (218), Expect = 3.1e-18 Identity = 40/103 (38.83%), Postives = 66/103 (64.08%), Query Frame = 0
BLAST of CmUC06G122950 vs. TAIR 10
Match: AT5G38195.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 82.8 bits (203), Expect = 1.7e-16 Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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