CmUC06G116940 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCGCTCCCAGTCTTTGGTCTTCGGGGCGAAGGTTCTTAAGCTGCACAACGTTGTGGCTGGCCTTTCCAATAGGGGCTGCCGGTGATGGCCGACGACAAACCGCCGATCGCGATCGCCACCAGAGATAGAGAACGAGATCTAGAGCATCTAATTTCCGTCGCCGGCTCGCCAAATGAAGATGCCTCTTGCAAGCCCTCGTCCTCTTCATCGTCCTCGCAGCAGACTGGCCGCGAGGTATCCTTCACTTCTTTCAATTGATTACGCTTCATTTCTCACCTCCTGATTGTTTGAGGCTACTCAGTGGTATTGCCTGTTGTTTGATTGAAATATCTTTGTGTCGCAGTCTATTTTAGGTTCTGTTTGGTTTCTTGCTAATCATTTCAATCATTTTCAGTCGTCTTCCTCCTCTTTTCTTCCCATACTTACTGTTGACTGGTGGTTTGCCTCTGTCATGGTTGGAGCATGAGTTGATCTTTATTTACTTTAGTTATTCACGTCTTCGTTGGAATTTAGCAAGGTGCTTCTCGAATCTCCACTGTAGGGTTTTAAACATTTAATTGATCAAGTCGATATTTCTGAAATTTGGCTCTCAATTGACTTCTATCGAAGACGGAGTGTACTTAATGAGTTAAGAGGATGGCTGGAACTGTAGCTGAATTAATCTCAATTTTGTTCAATCTTTAATATGCATCTTTCAGTGCATCCTCCACAATTCTGGATTCTTCTCTCTAAATTTATGTTTGATTACTTCCTTCCCTCCGTAAAGACACAGTTCGGAAGGCCGAACTTGAATTCCTTTATTCATTTGTAGCTCTTGAATGCATTTATACCCGTTAGATGCTCCAAAGAAAATCTCCAAACGGCTCTTCTGGTTGGAGTGACTCCTGAATCAAAGTGATGTAGATGTTGATCAACTTTCCTTCCATTGACTCCACTCAAGCAATTAGTGTCCTCTTCTTTTATATTCTTAGCATCCTTTGGTTCTTTCCATGTAACATATCAGATATTATATTTCAGATGCCTTGTGGTCGCTCTTGTATGATTCAATCCATGAATTTGATCGGTTAACAATCATTTTGGATTTTGAGAAGTTACTGATGGAGTATTTGCTTTAGTACGGATGGTAAAAACTAACATCTTTTGGATGTCTAGTTTACATTCTGAAGTCTTGCCATGAAGCACGGATGTATTAACAATGTAGTTGAAATGGCTATGGACATGTACAACACCCACTTAATTAGCTGATGGAAAATGTTGAATCTTTTCTTTTTATGCATCAAGCTCATGTTGGCTTTTCTGTCATATAAAACTGGAATAACCAATCACTGGTTATTCAAGACATCAATCTGTGTTTATTTTCTATCACCAGTGGTGGGTTCTAATATCCATTTTATCTACTGTGCAGACATTTTACAGAGTCTTTAGGAGCTGGGCCTCAAAAAAGTTCATGACTGGATGGTTTGTTATTTATTCTTTTATCTGTATTTCATTTCAATCGATGATTTTGATGCTAAGAAAAAATGGCATATAAACTACACTTGACATAAGCAGCGATTCTTGCATATTCACTGTAGCCATCATTGCTAAAATTGCACCTTCAGGCTGCTGTTTGAATTTGAAAACTGCACTTCAAAATTGCTCCCCTACTCAGTCCTTCTTAATGGAGTATGATAAGTTTTGAATTGGAGAAAATACTTATTTGCTTTCAACGTGATATGGTCCCAATTATAGTTGTTTTTCATAAGTGCTAACTGATTGTAGTGTTTTAATATCCTTACATCTTACCGTCTGACTCTTTTGCAGTGTCATTCTATTTCCAATTGCAATAACTTTCTATATAACATGGTGGTTTATTCACTTTGTGGATGGATTTTTTTCTCCGATCTATGCTCAACTTGGAATTGATATCTTTGGTAAGCAATCTTTATCACTTAACAGTTAACAGTTATTCCAAACCTATTCCATCTATGTGGAATTTGTTAGATATGCATTTGATCTACTACCTACAAGTACATGAGTGATTATTGTTATTCATCTCCATCAACGTCTGTTTTTTTTTTGCTCTCTTGTATGTAGACTGGTAAAATTGACAAAAAATATTCACATGCCCATCTTGCTCATCTTGCTGAATGATTAATGAGCGTTTATTCATTACAACAAACCTATTAAATTGTAAATTTCAAAATTTCTTACCATTATTCTTGTTTCTTGAATAGGTCTTGGATTTGCAACATCTGTAACATTCATCTTCCTTGTTGGGGTGTTCATGTCATCATGGTTGGGTGCTTCTGTTTTGGCTCTTGGAGAATGGTTCATCAACCGCATGCCATTTGTTCATCATATTTACAATGCTTCTAAGCAGATTAGTTCTGCTATTTCACCAGGTACAGCTTTCATAAGCATATTTATTTTTAACATGGTTTTACGTATGAACCGTCTATAATCTTGTCACTATATATTAGATCAAAATACCAAAGCCTTCAAGGAAGTTGCCATCATTAGGCACCCTCGTATTGGTGAATATGCGTTTGGGTTCATTACTTCAACTGTCACTCTCCAGGTATGTTATTTTCTGCTTCAATTCTTTTGAGTAACTTTCTGCATAGGAGATAGTTTGGGGACACCTTCTAGACTCGTTGACACTCCGATATTTGTTGGATATTTAATAAACCTCATTACATCATTTGTGTTGTATACTACACACAATAAAAAAGGTATTGATGCAATTTGAATGCAATTTGATAAAAAAATGTTGGATTTTTTTTATTGAAGCATATAGCAAATATATTCGATCTTGATACTTCTTGATGGACACAGACTGATTAGATTTATATTTTGCTGGTTGTGGAACCTTCCCATTCATGAACATTTATTACATGATATCCTAGCATCACATATATATAACTGATTTTTCTACTTTGCATTGGTCCCATATTGTGCTATCTCTTCTTATAAGTTGTATTTTAAATGGAAATGTTATACTTTTAAATGCGGAAAATTGGTTCATAAGAAGGACCAACTACAACCAATACTACCCTTGCGGAAAATTGGTTTATAAGAAGGACCAACTACAACCAATATTACCCTTGCACATGGAGGCACAGGCGTATGTTGAGCTAGAAAATCATTGACATTCATTGACATTCTTAGGCAGTACATGCTTCTTAGCATTGTATTGATATAAGAGTTTATTTACTTTTATGGTTCTCATGAATCTTCTTTAACTTTACATCTTAGATTCTTAGTTTTGGTTGAACTTCTATATTTAAAAATTTTCATTGTTTTGAAAATTGTATGAATGTGGATGGCTGCTAACAGTTTGTAGGTAGCCTTACGCAGTGTTTTTAAAGTGTGCGGTACTGAAAAAAAAAAAAAAAAACTTTTTTTCCCTGCATCCAATAGAAGAATGACAATAAATCAAATAGTATTATGAATAAGAAGATAATGAGAATTTCCAGAAATTAGAGCTTCTATTAGATGCTGGAGAAAATTGAACATTTTCAAATAATATTTCTATTAGAGACTGGAGTATAAGAATACTACGTTGGGGACTGTTTTCTTTTAATTGTCTGGGTAACTACATTATGCACTTAGTCATGTCAAGGCTTTTGCAACTGGCATAACTTGTAAGACACAAGTGCTGCAAGGCTTGATATTCTGATCTAACGATTTTCCTCTTTTAATGCAGAACTATTCTGGAGAGGAGGAGCTGTGTTGTGTATATGTTCCCACCAATCATCTCTACATTGGTGATGTTTTCCTAGTCAACTCTCAGGATGTTATTAGACCAAATTTGTCAGTTCGGGAAGGAATCGGTGGGTTTTTCTTTTTCTGTCATTATCTTTAGAATCACCTGGACAGATTCTCCTGAATCCCCCCCCCCCCCCCCCCATCTCTTCATCCCCCCAAAAATAATAAGTTAGAAATACGAGTCTTGATTAGGAATTACCTTTCTATTTTAAGAGGCGACGTGACTAGTAGCTTTCTAAGAGTAAAATAAAAACAAACTCTAATTATTTAAATTGCAGAGATCGTCGTGTCTGGAGGCATGTCGATGCCGCAGATACTATCCATACTGGATTCAGATATTCGACCAATTGAGAGTAGAAGATTGACTAGAAGCTGAGACTCTGAAGAGATGTACCATTGCTGGCTGCTAATAATCAATATACGATCATGGGGACGCCATTGTAGTTGTCAGAGACTCAGAGTAGTTGCCGTGCCTTCTGGGCATCGATAGCTTTAGGCGGTAAACCGTACTGATGATAGAAATTTGATTCTGGTAGTTGAATTTAGTGCCATATATCATCATGTGTTGGGTAGGGGTGAGAATACTTGTTGTTGATCATCCAGGATAGAAATTGGGTGTGCATTAGAATTTTTTCACTTTACTCTAATTCAATCGAAAATGTATACTTTCTTGTTGATGAGTCACATTGTTCTGTTGCATCAGATGTATATTTGAGCCTTGTACATATTTTGCAGCCACATTTATATGCTTCAAATTAATTATGAAAAACTTGCC CTTCGCTCCCAGTCTTTGGTCTTCGGGGCGAAGGTTCTTAAGCTGCACAACGTTGTGGCTGGCCTTTCCAATAGGGGCTGCCGGTGATGGCCGACGACAAACCGCCGATCGCGATCGCCACCAGAGATAGAGAACGAGATCTAGAGCATCTAATTTCCGTCGCCGGCTCGCCAAATGAAGATGCCTCTTGCAAGCCCTCGTCCTCTTCATCGTCCTCGCAGCAGACTGGCCGCGAGTCTATTTTAGGTTCTGTTTGGTTTCTTGCTAATCATTTCAATCATTTTCAGTCGTCTTCCTCCTCTTTTCTTCCCATACTTACTGTTGACTGGTGGTTTGCCTCTGTCATGACATTTTACAGAGTCTTTAGGAGCTGGGCCTCAAAAAAGTTCATGACTGGATGCGATTCTTGCATATTCACTGTAGCCATCATTGCTAAAATTGCACCTTCAGGCTGCTGTTTGAATTTGAAAACTGCACTTCAAAATTGCTCCCCTACTCAGTCCTTCTTAATGGATGTCATTCTATTTCCAATTGCAATAACTTTCTATATAACATGGTGGTTTATTCACTTTGTGGATGGATTTTTTTCTCCGATCTATGCTCAACTTGGAATTGATATCTTTGGTCTTGGATTTGCAACATCTGTAACATTCATCTTCCTTGTTGGGGTGTTCATGTCATCATGGTTGGGTGCTTCTGTTTTGGCTCTTGGAGAATGGTTCATCAACCGCATGCCATTTGTTCATCATATTTACAATGCTTCTAAGCAGATTAGTTCTGCTATTTCACCAGATCAAAATACCAAAGCCTTCAAGGAAGTTGCCATCATTAGGCACCCTCGTATTGGTGAATATGCGTTTGGGTTCATTACTTCAACTGTCACTCTCCAGAACTATTCTGGAGAGGAGGAGCTGTGTTGTGTATATGTTCCCACCAATCATCTCTACATTGGTGATGTTTTCCTAGTCAACTCTCAGGATGTTATTAGACCAAATTTGTCAGTTCGGGAAGGAATCGAGATCGTCGTGTCTGGAGGCATGTCGATGCCGCAGATACTATCCATACTGGATTCAGATATTCGACCAATTGAGAGTAGAAGATTGACTAGAAGCTGAGACTCTGAAGAGATGTACCATTGCTGGCTGCTAATAATCAATATACGATCATGGGGACGCCATTGTAGTTGTCAGAGACTCAGAGTAGTTGCCGTGCCTTCTGGGCATCGATAGCTTTAGGCGGTAAACCGTACTGATGATAGAAATTTGATTCTGGTAGTTGAATTTAGTGCCATATATCATCATGTGTTGGGTAGGGGTGAGAATACTTGTTGTTGATCATCCAGGATAGAAATTGGGTGTGCATTAGAATTTTTTCACTTTACTCTAATTCAATCGAAAATGTATACTTTCTTGTTGATGAGTCACATTGTTCTGTTGCATCAGATGTATATTTGAGCCTTGTACATATTTTGCAGCCACATTTATATGCTTCAAATTAATTATGAAAAACTTGCC ATGGCCGACGACAAACCGCCGATCGCGATCGCCACCAGAGATAGAGAACGAGATCTAGAGCATCTAATTTCCGTCGCCGGCTCGCCAAATGAAGATGCCTCTTGCAAGCCCTCGTCCTCTTCATCGTCCTCGCAGCAGACTGGCCGCGAGTCTATTTTAGGTTCTGTTTGGTTTCTTGCTAATCATTTCAATCATTTTCAGTCGTCTTCCTCCTCTTTTCTTCCCATACTTACTGTTGACTGGTGGTTTGCCTCTGTCATGACATTTTACAGAGTCTTTAGGAGCTGGGCCTCAAAAAAGTTCATGACTGGATGCGATTCTTGCATATTCACTGTAGCCATCATTGCTAAAATTGCACCTTCAGGCTGCTGTTTGAATTTGAAAACTGCACTTCAAAATTGCTCCCCTACTCAGTCCTTCTTAATGGATGTCATTCTATTTCCAATTGCAATAACTTTCTATATAACATGGTGGTTTATTCACTTTGTGGATGGATTTTTTTCTCCGATCTATGCTCAACTTGGAATTGATATCTTTGGTCTTGGATTTGCAACATCTGTAACATTCATCTTCCTTGTTGGGGTGTTCATGTCATCATGGTTGGGTGCTTCTGTTTTGGCTCTTGGAGAATGGTTCATCAACCGCATGCCATTTGTTCATCATATTTACAATGCTTCTAAGCAGATTAGTTCTGCTATTTCACCAGATCAAAATACCAAAGCCTTCAAGGAAGTTGCCATCATTAGGCACCCTCGTATTGGTGAATATGCGTTTGGGTTCATTACTTCAACTGTCACTCTCCAGAACTATTCTGGAGAGGAGGAGCTGTGTTGTGTATATGTTCCCACCAATCATCTCTACATTGGTGATGTTTTCCTAGTCAACTCTCAGGATGTTATTAGACCAAATTTGTCAGTTCGGGAAGGAATCGAGATCGTCGTGTCTGGAGGCATGTCGATGCCGCAGATACTATCCATACTGGATTCAGATATTCGACCAATTGAGAGTAGAAGATTGACTAGAAGCTGA MADDKPPIAIATRDRERDLEHLISVAGSPNEDASCKPSSSSSSSQQTGRESILGSVWFLANHFNHFQSSSSSFLPILTVDWWFASVMTFYRVFRSWASKKFMTGCDSCIFTVAIIAKIAPSGCCLNLKTALQNCSPTQSFLMDVILFPIAITFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFATSVTFIFLVGVFMSSWLGASVLALGEWFINRMPFVHHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEYAFGFITSTVTLQNYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVVSGGMSMPQILSILDSDIRPIESRRLTRS Homology
BLAST of CmUC06G116940 vs. NCBI nr
Match: XP_016902923.1 (PREDICTED: protein LIKE COV 1-like isoform X1 [Cucumis melo]) HSP 1 Score: 469.9 bits (1208), Expect = 1.8e-128 Identity = 258/342 (75.44%), Postives = 263/342 (76.90%), Query Frame = 0
BLAST of CmUC06G116940 vs. NCBI nr
Match: XP_008462683.1 (PREDICTED: protein LIKE COV 1-like isoform X2 [Cucumis melo]) HSP 1 Score: 466.8 bits (1200), Expect = 1.6e-127 Identity = 257/342 (75.15%), Postives = 260/342 (76.02%), Query Frame = 0
BLAST of CmUC06G116940 vs. NCBI nr
Match: XP_038880670.1 (protein LIKE COV 1-like [Benincasa hispida]) HSP 1 Score: 459.9 bits (1182), Expect = 1.9e-125 Identity = 253/342 (73.98%), Postives = 259/342 (75.73%), Query Frame = 0
BLAST of CmUC06G116940 vs. NCBI nr
Match: XP_011659829.1 (protein LIKE COV 1 [Cucumis sativus]) HSP 1 Score: 458.8 bits (1179), Expect = 4.2e-125 Identity = 251/342 (73.39%), Postives = 256/342 (74.85%), Query Frame = 0
BLAST of CmUC06G116940 vs. NCBI nr
Match: XP_022961332.1 (protein LIKE COV 1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 449.9 bits (1156), Expect = 2.0e-122 Identity = 250/343 (72.89%), Postives = 259/343 (75.51%), Query Frame = 0
BLAST of CmUC06G116940 vs. ExPASy Swiss-Prot
Match: F4IUE7 (Protein CONTINUOUS VASCULAR RING 1 OS=Arabidopsis thaliana OX=3702 GN=COV1 PE=1 SV=2) HSP 1 Score: 359.0 bits (920), Expect = 6.0e-98 Identity = 199/335 (59.40%), Postives = 225/335 (67.16%), Query Frame = 0
BLAST of CmUC06G116940 vs. ExPASy Swiss-Prot
Match: Q8VY49 (Protein LIKE COV 1 OS=Arabidopsis thaliana OX=3702 GN=LCV1 PE=2 SV=1) HSP 1 Score: 346.3 bits (887), Expect = 4.0e-94 Identity = 200/325 (61.54%), Postives = 216/325 (66.46%), Query Frame = 0
BLAST of CmUC06G116940 vs. ExPASy Swiss-Prot
Match: F4IQJ6 (Protein LIKE COV 3 OS=Arabidopsis thaliana OX=3702 GN=LCV3 PE=2 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 1.2e-85 Identity = 158/241 (65.56%), Postives = 185/241 (76.76%), Query Frame = 0
BLAST of CmUC06G116940 vs. ExPASy Swiss-Prot
Match: Q9C8C1 (Protein LIKE COV 2 OS=Arabidopsis thaliana OX=3702 GN=LCV2 PE=2 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 3.3e-80 Identity = 155/239 (64.85%), Postives = 176/239 (73.64%), Query Frame = 0
BLAST of CmUC06G116940 vs. ExPASy TrEMBL
Match: A0A1S4E3W8 (protein LIKE COV 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500987 PE=4 SV=1) HSP 1 Score: 469.9 bits (1208), Expect = 8.9e-129 Identity = 258/342 (75.44%), Postives = 263/342 (76.90%), Query Frame = 0
BLAST of CmUC06G116940 vs. ExPASy TrEMBL
Match: A0A1S3CI12 (protein LIKE COV 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500987 PE=4 SV=1) HSP 1 Score: 466.8 bits (1200), Expect = 7.5e-128 Identity = 257/342 (75.15%), Postives = 260/342 (76.02%), Query Frame = 0
BLAST of CmUC06G116940 vs. ExPASy TrEMBL
Match: A0A6J1H9X5 (protein LIKE COV 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461852 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 9.5e-123 Identity = 250/343 (72.89%), Postives = 259/343 (75.51%), Query Frame = 0
BLAST of CmUC06G116940 vs. ExPASy TrEMBL
Match: A0A6J1CUV2 (protein LIKE COV 1-like OS=Momordica charantia OX=3673 GN=LOC111014556 PE=4 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 2.8e-122 Identity = 247/342 (72.22%), Postives = 254/342 (74.27%), Query Frame = 0
BLAST of CmUC06G116940 vs. ExPASy TrEMBL
Match: A0A6J1JFG6 (protein LIKE COV 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485261 PE=4 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 6.8e-121 Identity = 247/343 (72.01%), Postives = 258/343 (75.22%), Query Frame = 0
BLAST of CmUC06G116940 vs. TAIR 10
Match: AT2G20120.1 (Protein of unknown function (DUF502) ) HSP 1 Score: 358.2 bits (918), Expect = 7.2e-99 Identity = 199/335 (59.40%), Postives = 225/335 (67.16%), Query Frame = 0
BLAST of CmUC06G116940 vs. TAIR 10
Match: AT2G20130.1 (like COV 1 ) HSP 1 Score: 346.3 bits (887), Expect = 2.8e-95 Identity = 200/325 (61.54%), Postives = 216/325 (66.46%), Query Frame = 0
BLAST of CmUC06G116940 vs. TAIR 10
Match: AT2G18460.1 (like COV 3 ) HSP 1 Score: 318.2 bits (814), Expect = 8.3e-87 Identity = 158/241 (65.56%), Postives = 185/241 (76.76%), Query Frame = 0
BLAST of CmUC06G116940 vs. TAIR 10
Match: AT1G43130.1 (like COV 2 ) HSP 1 Score: 300.1 bits (767), Expect = 2.3e-81 Identity = 155/239 (64.85%), Postives = 176/239 (73.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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