CmUC06G116550 (gene) Watermelon (USVL531) v1

Overview
NameCmUC06G116550
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
LocationCmU531Chr06: 11350570 .. 11352150 (+)
RNA-Seq ExpressionCmUC06G116550
SyntenyCmUC06G116550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCGTTCATTATTAGATAGATTTCTTGTATCCAATAATTGGGAGGAGGATTTCGAAGACACAAGAGTGACGAGGCTAGTAAGATTATTCTCAGACCATTTCCCCATCCTACTAGAAGCAGGTGCTTTTGATTGGGGACCATCTCCATTTAGATTTTGTAACAACTGGTTGCTAAATCATCAATGCGTTGGAATCATCGAAAGAACTTTAGACTCGGGCAATCAACACGGATGGGCAGGATTCATCATTCTGTCTAATTTTAGAGCAGTCAAAGTTTCAATGAAAAAGTGGCAAGTGGAGTTTATTAGAAAGCAACAGAGGCAAGAGAAGCCAATTTTAGACATGCTTGTCCAGGAAGAATCCAGAGCTGAATCAATAGATCTCCCCTCATTAGAGCTTGATTTGAGATCCTCCCTAAACGCTGAATTGATGAGTATCTATAGAACGGAGGAAAGGAACCTTATCCAAAAAAGTAAACTCAATTGGCTTAAATTAGGGGATGAAAGTTCGAGATTTTTCCACCAATTCCTTGCTGCAAAAAAGAGAAGGAACCTAATCTTTGAATTATTAAATAACCAAGGCAATCCAACAAAATCCTTTCGAGAGATTGAGACCTTAGTCATTGATTACTATAAAGCCTTGTATTCAAAGCTGCCAAATGCAGGTTCCTTTCCAAGCAATCTGGATTGGCAATCAGTATCAGATGAGCAAAACAGTAGGCTGGTTGCAAGCTTCACTGAGGGAGAAATCAGAAAAGCCTTAAAAGATTTCGGGAGGAATAAAGCACCTGGTCTGGATGGTTTTATAGTTGAATTTCTCATCAAGTTTTGGGAGAAGCTTAAGGGGCACTTCATTAGTCTCTTCAATGAATTGTATACAAATGGAAAATTGGACTCTTGTGTCAAGAAGAACTTTATTTGCTTAATTAAAAAGAAAAAGGACGCAATTGTGACTAAAGACTTCCGCCCAATAAGTCTTACAACGATTGTGTACAAAGTAATTGCCAAAGTTCTTGCCAAAAGATTGAAGAAAGTCATGCCAAGCATCATTGCTCCAACCCAAAGTGCTTTCATAGAGGGGAGACAAATTTTAGATCCTATTATTATAGCAAATGAGATTGTTGAAGAATATAGACGTAATCGGAAGAAAGGTTGGCTACTTAAGCTTGATATGGAAAAGGCTTTTGATCGAGTCGATTGGACTTTCTCGGAGAAGGTTCTAAGAGAGAAGAATTTCGATACAAGATGGATAGCGTGGATTTTGGGTTGCATTAAAAATCCTAAGTACTCAATCTTCATCAGTAGGCGGCCAAGAGGAAGAATATTGGCATCAAGAGGAATCCGGCAAGGTGACCCCCTTTCTCCTTTCATTTTCCTTCTAATCAGTGAGGTATTGAGCAGCCTCATTTCAAGACTCCATAGGAAAAATAAGTTTGAAGGATTCATTGTTGGAAGAGATAAAGTTCATGTGCCCTTGCTTCAATTCGTGGATGACACACTAATCTTTTGCAAATATGATGGAGAAATGTTAGAAAACTTGCGCAAAACTATAGAGCTTTTTGAATGGTGCTCCGGTTAG

mRNA sequence

ATGTCTCGTTCATTATTAGATAGATTTCTTGTATCCAATAATTGGGAGGAGGATTTCGAAGACACAAGAGTGACGAGGCTAGTAAGATTATTCTCAGACCATTTCCCCATCCTACTAGAAGCAGGTGCTTTTGATTGGGGACCATCTCCATTTAGATTTTGTAACAACTGGTTGCTAAATCATCAATGCGTTGGAATCATCGAAAGAACTTTAGACTCGGGCAATCAACACGGATGGGCAGGATTCATCATTCTGTCTAATTTTAGAGCAGTCAAAGTTTCAATGAAAAAGTGGCAAGTGGAGTTTATTAGAAAGCAACAGAGGCAAGAGAAGCCAATTTTAGACATGCTTGTCCAGGAAGAATCCAGAGCTGAATCAATAGATCTCCCCTCATTAGAGCTTGATTTGAGATCCTCCCTAAACGCTGAATTGATGAGTATCTATAGAACGGAGGAAAGGAACCTTATCCAAAAAAGTAAACTCAATTGGCTTAAATTAGGGGATGAAAGTTCGAGATTTTTCCACCAATTCCTTGCTGCAAAAAAGAGAAGGAACCTAATCTTTGAATTATTAAATAACCAAGGCAATCCAACAAAATCCTTTCGAGAGATTGAGACCTTAGTCATTGATTACTATAAAGCCTTGTATTCAAAGCTGCCAAATGCAGGTTCCTTTCCAAGCAATCTGGATTGGCAATCAGTATCAGATGAGCAAAACAGTAGGCTGGTTGCAAGCTTCACTGAGGGAGAAATCAGAAAAGCCTTAAAAGATTTCGGGAGGAATAAAGCACCTGGTCTGGATGGTTTTATAGTTGAATTTCTCATCAAGTTTTGGGAGAAGCTTAAGGGGCACTTCATTAGTCTCTTCAATGAATTGTATACAAATGGAAAATTGGACTCTTGTGTCAAGAAGAACTTTATTTGCTTAATTAAAAAGAAAAAGGACGCAATTGTGACTAAAGACTTCCGCCCAATAAGTCTTACAACGATTGTGTACAAAGTAATTGCCAAAGTTCTTGCCAAAAGATTGAAGAAAGTCATGCCAAGCATCATTGCTCCAACCCAAAGTGCTTTCATAGAGGGGAGACAAATTTTAGATCCTATTATTATAGCAAATGAGATTGTTGAAGAATATAGACGTAATCGGAAGAAAGGTTGGCTACTTAAGCTTGATATGGAAAAGGCTTTTGATCGAGTCGATTGGACTTTCTCGGAGAAGGTTCTAAGAGAGAAGAATTTCGATACAAGATGGATAGCGTGGATTTTGGGTTGCATTAAAAATCCTAAGTACTCAATCTTCATCAGTAGGCGGCCAAGAGGAAGAATATTGGCATCAAGAGGAATCCGGCAAGGTGACCCCCTTTCTCCTTTCATTTTCCTTCTAATCAGTGAGGTATTGAGCAGCCTCATTTCAAGACTCCATAGGAAAAATAAGTTTGAAGGATTCATTGTTGGAAGAGATAAAGTTCATGTGCCCTTGCTTCAATTCGTGGATGACACACTAATCTTTTGCAAATATGATGGAGAAATGTTAGAAAACTTGCGCAAAACTATAGAGCTTTTTGAATGGTGCTCCGGTTAG

Coding sequence (CDS)

ATGTCTCGTTCATTATTAGATAGATTTCTTGTATCCAATAATTGGGAGGAGGATTTCGAAGACACAAGAGTGACGAGGCTAGTAAGATTATTCTCAGACCATTTCCCCATCCTACTAGAAGCAGGTGCTTTTGATTGGGGACCATCTCCATTTAGATTTTGTAACAACTGGTTGCTAAATCATCAATGCGTTGGAATCATCGAAAGAACTTTAGACTCGGGCAATCAACACGGATGGGCAGGATTCATCATTCTGTCTAATTTTAGAGCAGTCAAAGTTTCAATGAAAAAGTGGCAAGTGGAGTTTATTAGAAAGCAACAGAGGCAAGAGAAGCCAATTTTAGACATGCTTGTCCAGGAAGAATCCAGAGCTGAATCAATAGATCTCCCCTCATTAGAGCTTGATTTGAGATCCTCCCTAAACGCTGAATTGATGAGTATCTATAGAACGGAGGAAAGGAACCTTATCCAAAAAAGTAAACTCAATTGGCTTAAATTAGGGGATGAAAGTTCGAGATTTTTCCACCAATTCCTTGCTGCAAAAAAGAGAAGGAACCTAATCTTTGAATTATTAAATAACCAAGGCAATCCAACAAAATCCTTTCGAGAGATTGAGACCTTAGTCATTGATTACTATAAAGCCTTGTATTCAAAGCTGCCAAATGCAGGTTCCTTTCCAAGCAATCTGGATTGGCAATCAGTATCAGATGAGCAAAACAGTAGGCTGGTTGCAAGCTTCACTGAGGGAGAAATCAGAAAAGCCTTAAAAGATTTCGGGAGGAATAAAGCACCTGGTCTGGATGGTTTTATAGTTGAATTTCTCATCAAGTTTTGGGAGAAGCTTAAGGGGCACTTCATTAGTCTCTTCAATGAATTGTATACAAATGGAAAATTGGACTCTTGTGTCAAGAAGAACTTTATTTGCTTAATTAAAAAGAAAAAGGACGCAATTGTGACTAAAGACTTCCGCCCAATAAGTCTTACAACGATTGTGTACAAAGTAATTGCCAAAGTTCTTGCCAAAAGATTGAAGAAAGTCATGCCAAGCATCATTGCTCCAACCCAAAGTGCTTTCATAGAGGGGAGACAAATTTTAGATCCTATTATTATAGCAAATGAGATTGTTGAAGAATATAGACGTAATCGGAAGAAAGGTTGGCTACTTAAGCTTGATATGGAAAAGGCTTTTGATCGAGTCGATTGGACTTTCTCGGAGAAGGTTCTAAGAGAGAAGAATTTCGATACAAGATGGATAGCGTGGATTTTGGGTTGCATTAAAAATCCTAAGTACTCAATCTTCATCAGTAGGCGGCCAAGAGGAAGAATATTGGCATCAAGAGGAATCCGGCAAGGTGACCCCCTTTCTCCTTTCATTTTCCTTCTAATCAGTGAGGTATTGAGCAGCCTCATTTCAAGACTCCATAGGAAAAATAAGTTTGAAGGATTCATTGTTGGAAGAGATAAAGTTCATGTGCCCTTGCTTCAATTCGTGGATGACACACTAATCTTTTGCAAATATGATGGAGAAATGTTAGAAAACTTGCGCAAAACTATAGAGCTTTTTGAATGGTGCTCCGGTTAG

Protein sequence

MSRSLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG
Homology
BLAST of CmUC06G116550 vs. NCBI nr
Match: RVW64408.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 377.9 bits (969), Expect = 1.5e-100
Identity = 197/521 (37.81%), Postives = 297/521 (57.01%), Query Frame = 0

Query: 6    LDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVG 65
            LDRFL S+ W+  F  +    L R  SDH PI LE     WGP+PFRF N WLL+ +   
Sbjct: 931  LDRFLFSSEWDTFFSQSFQEALPRWTSDHSPICLETNPLKWGPTPFRFENMWLLHPEFKE 990

Query: 66   IIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEESRAE 125
                        GW G   +   + VK  +K+W +      + ++K IL  L + +   +
Sbjct: 991  KFRVWWLECTGEGWEGHKFMRKLKFVKSKLKEWNIMTFGDLKERKKLILTDLSRIDLIEQ 1050

Query: 126  SIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRN 185
              +L S  +  R+    EL  +   EE    QKS++ W+K GD +S+FFH+    ++ R 
Sbjct: 1051 EGNLNSDLVLERTLKRRELEDVLLKEEVQWRQKSRVKWIKEGDCNSKFFHRVATGRRSRK 1110

Query: 186  LIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVAS 245
             I  L++ +G    +  +I   +++++  LYSK          +DW  +S E    L   
Sbjct: 1111 FIKSLISERGETLNNIEDISEEIVNFFGNLYSKPVGESWRVEGIDWVPISGESGGWLDRP 1170

Query: 246  FTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVKKN 305
            FTE E+R+A+    + KAPG DGF +    + W+ +K   + +F E +TNG ++      
Sbjct: 1171 FTEEEVRRAVFQLNKEKAPGPDGFTIAVYQECWDVIKEDLMRVFLEFHTNGVINQSTNAT 1230

Query: 306  FICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQIL 365
            FI L+ KK  ++   D+RPISL T +YK+IAKVL+ RL+KV+   I+ +Q AF+EGR IL
Sbjct: 1231 FIALVPKKSQSVKISDYRPISLVTSLYKIIAKVLSGRLRKVLHETISDSQGAFVEGRHIL 1290

Query: 366  DPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILGCI 425
            D ++IANE+V+E RR+ ++G + K+D EKA+D VDW F + VL+ K F  +W  WI GC+
Sbjct: 1291 DAVLIANEVVDEKRRSGEEGIVFKIDFEKAYDHVDWGFLDHVLQRKGFSQKWRLWIRGCL 1350

Query: 426  KNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVG 485
             +  ++I ++   +G + ASRG+RQGDPLSPF+F L+++VLS ++ R       EGF VG
Sbjct: 1351 SSSSFAILVNGNAKGWVKASRGLRQGDPLSPFLFTLVADVLSRMLFRAEETGLTEGFSVG 1410

Query: 486  RDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG 527
            RD+  V LLQF DDT+ F K   E L+NL+  + +F   SG
Sbjct: 1411 RDRTRVSLLQFADDTIFFSKASMEHLQNLKIILLVFGQVSG 1451

BLAST of CmUC06G116550 vs. NCBI nr
Match: TYJ99326.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 375.9 bits (964), Expect = 5.5e-100
Identity = 205/526 (38.97%), Postives = 311/526 (59.13%), Query Frame = 0

Query: 4   SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQC 63
           S LDRFL S  WE  F       L R  SDHFPI+LE+ +  WGPSPFRF N +L +   
Sbjct: 122 SRLDRFLFSTQWENIFPGHTSKVLTRTTSDHFPIVLESSSISWGPSPFRFTNAYLKDPDY 181

Query: 64  VGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEK---PILDMLVQE 123
              IE    + +Q G+AG+  +   + + + +K W  E   K +  +K     +D++ + 
Sbjct: 182 KRNIEFWWGNTSQPGFAGYSFMHRLKQLAMKIKAWGREKKGKDEASKKAWIKEIDLINKL 241

Query: 124 ESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAA 183
           E+   S +   +  + R +L A+L  I  TE +   QK K  W+  GDE+S FFH+   A
Sbjct: 242 EAEGTSTE---IHREKRIALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFHKICTA 301

Query: 184 KKRRNLIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNS 243
           ++++ LI +++N  G    +  +I    I +++ +Y+   N+  F  NLDW  +S+  + 
Sbjct: 302 RQKKCLISKIINICGQNCLNDSDIVDAFIQHFEEIYTDNRNSHLFIDNLDWCPISNTNSG 361

Query: 244 RLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDS 303
            L   F E EI   LK F +NKAPG DGF ++FL K W  +K +   +F + ++N  ++ 
Sbjct: 362 LLDKPFNEAEIWLTLKSFAKNKAPGPDGFTMDFLQKSWSFMKQNICDIFKDFHSNHTINK 421

Query: 304 CVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIE 363
            V +  I  I KK++     DFRPISLTT +YK+IAKVLA RLK+ +P  I+ +Q AF++
Sbjct: 422 VVNETLITFIAKKENCETVADFRPISLTTAIYKLIAKVLADRLKQTLPDTISESQMAFVK 481

Query: 364 GRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAW 423
           GRQI + I+IANE ++ +R  +++G+++KLD+EKAFD+++W F + +L +KN+  +W   
Sbjct: 482 GRQITEAILIANEALDLWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMKKNYSQKWRKM 541

Query: 424 ILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFE 483
           I  CI + +YSI I+ RPRGRI  SRGIRQGDPLSPFIF+L  + LS L++ L  K K  
Sbjct: 542 IASCISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKGKIN 601

Query: 484 GFIVGRDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG 527
           G   G   +++  + F DD LIF +   + + NL+  + LFE  SG
Sbjct: 602 GVNFG-PNLNLTHILFADDILIFVEDKDDYVSNLKMILHLFESASG 643

BLAST of CmUC06G116550 vs. NCBI nr
Match: RVW90400.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 375.6 bits (963), Expect = 7.2e-100
Identity = 200/521 (38.39%), Postives = 292/521 (56.05%), Query Frame = 0

Query: 6   LDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVG 65
           LDRFL SN WE+ F  +    L R  SDH+PI+LE   F WGP+PFRF N WL +     
Sbjct: 209 LDRFLYSNEWEQVFPQSLQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHSSFKE 268

Query: 66  IIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEESRAE 125
              R       +GW G   +   + VK  +K+W      +  +++K IL +L   +S  +
Sbjct: 269 NFGRWWSEFQGNGWEGHKFMRKLQFVKAKLKEWNKTSFGELSKKKKDILAVLANFDSLEQ 328

Query: 126 SIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRN 185
              L    L  R+    EL  +   EE +  QK+++ W+K GD +S+FFH+    ++ R 
Sbjct: 329 EGGLSHERLVQRAFSKGELEELILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRK 388

Query: 186 LIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVAS 245
            I EL N  G    +   I+  ++ Y++ LY+           LDW  +  E  SRL   
Sbjct: 389 FIKELENESGLMLNNPESIKEEILKYFEKLYASPSGESWRVEGLDWSPIDGESASRLEFP 448

Query: 246 FTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVKKN 305
           FTE EI KA+    R+KAPG DGF +      W+ +K   + +F E + +G ++     +
Sbjct: 449 FTEEEIYKAIFQMDRDKAPGPDGFTIAVFQDCWDVIKEDLVRVFTEFHRSGIINQSTNAS 508

Query: 306 FICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQIL 365
           FI LI KK  +    D+RPISL T +YK+IAKVLA RL+ V+   I  TQ AF++GRQIL
Sbjct: 509 FIVLIPKKSMSRRISDYRPISLITSLYKIIAKVLAGRLRGVLHETIHSTQGAFVQGRQIL 568

Query: 366 DPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILGCI 425
           D ++IANEIV+E RR  ++G + K+D EKA+D V W F + VL  K F  RW  W+ GC+
Sbjct: 569 DAVLIANEIVDEKRRTGEEGVVFKIDFEKAYDHVSWDFLDHVLEMKGFSLRWRKWMRGCL 628

Query: 426 KNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVG 485
            +  Y++ ++   +G + ASRG+RQGDPLSPF+F ++++VLS ++ +   +N  EGF VG
Sbjct: 629 SSVSYAVLVNGNAKGWVKASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEGFRVG 688

Query: 486 RDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG 527
           R++  V  LQF DDT+ F     E L  L+  + +F   SG
Sbjct: 689 RNRTRVSHLQFADDTIFFSSTREEDLMTLKSVLLVFGHISG 729

BLAST of CmUC06G116550 vs. NCBI nr
Match: RVW65579.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 374.8 bits (961), Expect = 1.2e-99
Identity = 200/521 (38.39%), Postives = 293/521 (56.24%), Query Frame = 0

Query: 6   LDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVG 65
           LDRFL SN WE+ F  +    L R  SDH+PI+LE   F WGP+PFRF N WL +     
Sbjct: 196 LDRFLYSNEWEQVFPQSLQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHSSFKE 255

Query: 66  IIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEESRAE 125
              R       +GW G   +   + VK  +K+W      +  +++K IL +L   +S  +
Sbjct: 256 NFGRWWSEFQGNGWEGHKFMRKLQFVKAKLKEWNKTSFGELSKKKKDILAVLANFDSLEQ 315

Query: 126 SIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRN 185
              L    L  R+    EL  +   EE +  QK+++ W+K GD +S+FFH+    ++ R 
Sbjct: 316 EGGLSQELLVQRAFSKGELEELILREEIHWRQKARVKWVKKGDCNSKFFHKVANGRRNRK 375

Query: 186 LIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVAS 245
            I EL N  G    +   I+  ++ Y++ LY+           LDW  +  E  SRL + 
Sbjct: 376 FIKELENESGLMLNNPESIKEEILKYFEKLYACPSRESWRVEGLDWSPIDGESASRLESP 435

Query: 246 FTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVKKN 305
           FTE EI KA+    R+KAPG DGF +      W+ +K   + +F E + +G ++     +
Sbjct: 436 FTEEEIYKAIFQMDRDKAPGPDGFTIAVFQDCWDVIKEDLVRVFAEFHRSGIINQSTNAS 495

Query: 306 FICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQIL 365
           FI L+ KK  +    DFRPISL T +YK+IAKVLA RL+ V+   I  TQ AF++GRQIL
Sbjct: 496 FIVLLPKKSISRRISDFRPISLITSLYKIIAKVLAGRLRGVLHETIHSTQGAFVQGRQIL 555

Query: 366 DPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILGCI 425
           D ++IANEIV+E RR  ++G + K+D EKA+D V W F + VL  K F  RW  W+ GC+
Sbjct: 556 DAVLIANEIVDEKRRTGEEGVVFKIDFEKAYDHVSWDFLDHVLEMKGFSLRWRKWMRGCL 615

Query: 426 KNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVG 485
            +  Y++ ++   +G + ASRG+RQGDPLSPF+F ++++VLS ++ +   +N  EGF VG
Sbjct: 616 SSVSYAVLVNGNAKGWVKASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEGFRVG 675

Query: 486 RDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG 527
           R++  V  LQF DDT+ F     E L  L+  + +F   SG
Sbjct: 676 RNRTRVSHLQFADDTIFFSSTREEDLMTLKSVLLVFGHISG 716

BLAST of CmUC06G116550 vs. NCBI nr
Match: KAA0039950.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK24553.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 374.0 bits (959), Expect = 2.1e-99
Identity = 200/523 (38.24%), Postives = 306/523 (58.51%), Query Frame = 0

Query: 4   SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQC 63
           S LDRFL ++ WE  F       L R  SDHFPI+LE+    WGPSPFRF N +L +   
Sbjct: 122 SRLDRFLFTSQWENIFPGHTSKVLTRTTSDHFPIVLESSTISWGPSPFRFTNAYLKDPDY 181

Query: 64  VGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEESR 123
              IE    + +Q G+AG+  +   + + + +K W  +   K +  +K  +  + Q +  
Sbjct: 182 KKNIEFWWGNTSQPGYAGYSFMRRLKQLALIIKTWGRDKKGKNEASKKACIKEIDQIDKL 241

Query: 124 AESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKR 183
                   +  + R++L A+L  I  TE +   QK K  W+  GDE+S FFH+   A+++
Sbjct: 242 EAEGSATEIHREKRTALKADLSQINLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQK 301

Query: 184 RNLIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLV 243
           + LI +++NN G    +  +I    I +++ +Y+   N+  F  NLDW  +S+  +  L 
Sbjct: 302 KCLISKIINNSGQNCLNDSDIADAFIQHFEDIYTDNRNSQLFIENLDWCPISNINSELLD 361

Query: 244 ASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVK 303
             F E EI   LK F +NKAPG DG+ ++FL K W  +K +   +F + ++   ++  V 
Sbjct: 362 KPFNEAEIWLTLKSFAKNKAPGPDGYAMDFLQKSWSFMKQNICDIFKDFHSTHIINKVVN 421

Query: 304 KNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQ 363
           +  I LI KK+      DFRPISLTT +YK+IAK LA RLK+ +P  I+ +Q AF++GRQ
Sbjct: 422 ETLITLIAKKEHCETAADFRPISLTTAIYKLIAKTLADRLKQTLPDTISESQMAFVKGRQ 481

Query: 364 ILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILG 423
           I + I+IANE ++ +R  +++G+++KLD+EKAFD+++W F + VL +KN+  +W   I  
Sbjct: 482 ITEAILIANEALDFWRSKKERGFVIKLDIEKAFDKLNWRFIDFVLMKKNYSQKWRKMIAS 541

Query: 424 CIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFI 483
           CI + +YSI I+ RPRGRI  SRGIRQGDPLSPFIF+L  + LS L++ L  K K  G +
Sbjct: 542 CISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKRKING-V 601

Query: 484 VGRDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG 527
                +++  + F DD LIF +   + + NL+  + LFE  SG
Sbjct: 602 KFSPNLNLTHILFADDILIFVEDRDDYVSNLKMILHLFESASG 643

BLAST of CmUC06G116550 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.8e-38
Identity = 136/515 (26.41%), Postives = 233/515 (45.24%), Query Frame = 0

Query: 1   MSRSLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGP-SPFRFCNNWLL 60
           +S+S +DR  +S++     + + +   +  FSDH  + L        P + +   NN LL
Sbjct: 199 VSQSRIDRIYISSHLMSRAQSSTIR--LAPFSDHNCVSLRMSIAPSLPKAAYWHFNNSLL 258

Query: 61  NHQCVGIIERTLDSGNQHGWAG----FIILSNFRAV-KVSMKKWQVEFIRKQQRQEKPIL 120
             +  G  +   D+    GW      F  L+ +  V KV +K    E+ +    Q    +
Sbjct: 259 EDE--GFAKSVRDT--WRGWRAFQDEFATLNQWWDVGKVHLKLLCQEYTKSVSGQRNAEI 318

Query: 121 DMLVQE----ESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDES 180
           + L  E    E R    +  +L+ +      A L ++ + + R    +S++  L   D  
Sbjct: 319 EALNGEVLDLEQRLSGSEDQALQCEYLERKEA-LRNMEQRQARGAFVRSRMQLLCDMDRG 378

Query: 181 SRFFHQFLAAKKRRNLIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLD 240
           SRFF+     K  R  I  L    G P +    I      +Y+ L+S  P +      L 
Sbjct: 379 SRFFYALEKKKGNRKQITCLFAEDGTPLEDPEAIRDRARSFYQNLFSPDPISPDACEEL- 438

Query: 241 WQS---VSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFIS 300
           W     VS+ +  RL    T  E+ +AL+    NK+PGLDG  +EF   FW+ L   F  
Sbjct: 439 WDGLPVVSERRKERLETPITLDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHR 498

Query: 301 LFNELYTNGKLDSCVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVM 360
           +  E +  G+L    ++  + L+ KK D  + K++RP+SL +  YK++AK ++ RLK V+
Sbjct: 499 VLTEAFKKGELPLSCRRAVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVL 558

Query: 361 PSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKV 420
             +I P QS  + GR I D + +  +++   RR       L LD EKAFDRVD  +    
Sbjct: 559 AEVIHPDQSYTVPGRTIFDNVFLIRDLLHFARRTGLSLAFLSLDQEKAFDRVDHQYLIGT 618

Query: 421 LREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLS 480
           L+  +F  +++ ++     + +  + I+      +   RG+RQG PLS  ++ L  E   
Sbjct: 619 LQAYSFGPQFVGYLKTMYASAECLVKINWSLTAPLAFGRGVRQGCPLSGQLYSLAIEPFL 678

Query: 481 SLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLI 503
            L+     + +  G ++    + V L  + DD ++
Sbjct: 679 CLL-----RKRLTGLVLKEPDMRVVLSAYADDVIL 700

BLAST of CmUC06G116550 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.7e-35
Identity = 122/461 (26.46%), Postives = 218/461 (47.29%), Query Frame = 0

Query: 72  DSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEESRAESIDLPS 131
           D+  Q+ W  F  +   + + ++  K      RKQ+R +   L   ++E  + E     +
Sbjct: 281 DTTYQNLWDAFKAVCRGKFIALNAYK------RKQERSKIDTLTSQLKELEKQEQTHSKA 340

Query: 132 LELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELL 191
                 + + AEL  I   +    I +S+  + +  ++  R   + +  K+ +N I  + 
Sbjct: 341 SRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDRPLARLIKKKREKNQIDTIK 400

Query: 192 NNQGNPTKSFREIETLVIDYYKALY-SKLPNAGSFPSNLDWQS---VSDEQNSRLVASFT 251
           N++G+ T    EI+T + +YYK LY +KL N     + LD  +   ++ E+   L    T
Sbjct: 401 NDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLPRLNQEEVESLNRPIT 460

Query: 252 EGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKL-DSCVKKNF 311
             EI   +      K+PG DGF  EF  ++ E+L    + LF  +   G L +S  + + 
Sbjct: 461 GSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASI 520

Query: 312 ICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILD 371
           I + K  +D    ++FRPISL  I  K++ K+LA R+++ +  +I   Q  FI G Q   
Sbjct: 521 ILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWF 580

Query: 372 PIIIANEIVEEYRRNRKKGW-LLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILGCI 431
            I  +  +++   R + K   ++ +D EKAFD++   F  K L +   D  ++  I    
Sbjct: 581 NIRKSINVIQHINRAKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIY 640

Query: 432 KNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVG 491
             P  +I ++ +         G RQG PLSP +F ++ EVL+  I    ++ + +G  +G
Sbjct: 641 DKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAI---RQEKEIKGIQLG 700

Query: 492 RDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG 527
           +++V + L  F DD +++ +      +NL K I  F   SG
Sbjct: 701 KEEVKLSL--FADDMIVYLENPIVSAQNLLKLISNFSKVSG 730

BLAST of CmUC06G116550 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 2.5e-31
Identity = 100/324 (30.86%), Postives = 160/324 (49.38%), Query Frame = 0

Query: 186 LIFELLNNQGNPTKSFREIETLVIDYYKALYS-KLPNAGSFPSNLDWQSV---SDEQNSR 245
           LI ++ N +G+ T    EI+  +  +YK LYS KL N       LD   V   + +Q   
Sbjct: 396 LINKIRNEKGDITTDPEEIQNTIRSFYKRLYSTKLENLDEMDKFLDRYQVPKLNQDQVDH 455

Query: 246 LVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSC 305
           L +  +  EI   +      K+PG DGF  EF   F E L      LF+++   G L + 
Sbjct: 456 LNSPISPKEIEAVINSLPTKKSPGPDGFSAEFYQTFKEDLIPILHKLFHKIEVEGTLPNS 515

Query: 306 VKKNFICLI-KKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIE 365
             +  I LI K +KD    ++FRPISL  I  K++ K+LA R+++ + +II P Q  FI 
Sbjct: 516 FYEATITLIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIP 575

Query: 366 GRQILDPIIIANEIVEEYRRNRKKG-WLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIA 425
           G Q    I  +  ++    + + K   ++ LD EKAFD++   F  KVL        ++ 
Sbjct: 576 GMQGWFNIRKSINVIHYINKLKDKNHMIISLDAEKAFDKIQHPFMIKVLERSGIQGPYLN 635

Query: 426 WILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKF 485
            I      P  +I ++      I    G RQG PLSP++F ++ EVL+  I    ++ + 
Sbjct: 636 MIKAIYSKPVANIKVNGEKLEAIPLKSGTRQGCPLSPYLFNIVLEVLARAI---RQQKEI 695

Query: 486 EGFIVGRDKVHVPLLQFVDDTLIF 504
           +G  +G+++V + LL   DD +++
Sbjct: 696 KGIQIGKEEVKISLL--ADDMIVY 714

BLAST of CmUC06G116550 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.4e-29
Identity = 113/432 (26.16%), Postives = 199/432 (46.06%), Query Frame = 0

Query: 102 FIRKQQRQE-KPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSK 161
           F++K +R+E   ++  L Q E    S   PS   ++ + + AEL  I        I KSK
Sbjct: 304 FLKKTEREEVNNLMGHLKQLEKEEHSNPKPSRRKEI-TKIRAELNEIENKRIIQQINKSK 363

Query: 162 LNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKSFREIETLVIDYYKALYS-KL 221
             + +  ++  +        K+ ++LI  + N     T    EI+ ++ +YYK LYS K 
Sbjct: 364 SWFFEKINKIDKPLANLTRKKRVKSLISSIRNGNDEITTDPSEIQKILNEYYKKLYSHKY 423

Query: 222 PNAGSFPSNLD---WQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIK 281
            N       L+      +S ++   L    +  EI   +++  + K+PG DGF  EF   
Sbjct: 424 ENLKEIDQYLEACHLPRLSQKEVEMLNRPISSSEIASTIQNLPKKKSPGPDGFTSEFYQT 483

Query: 282 FWEKLKGHFISLFNELYTNGKLDSCVKKNFICLIKKK-KDAIVTKDFRPISLTTIVYKVI 341
           F E+L    ++LF  +   G L +   +  I LI K  KD    +++RPISL  I  K++
Sbjct: 484 FKEELVPILLNLFQNIEKEGILPNTFYEANITLIPKPGKDPTRKENYRPISLMNIDAKIL 543

Query: 342 AKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKG-WLLKLDMEK 401
            K+L  R+++ +  II   Q  FI G Q    I  +  +++   + + K   +L +D EK
Sbjct: 544 NKILTNRIQQHIKKIIHHDQVGFIPGSQGWFNIRKSINVIQHINKLKNKDHMILSIDAEK 603

Query: 402 AFDRVDWTFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPL 461
           AFD +   F  + L++   +  ++  I      P  +I ++           G RQG PL
Sbjct: 604 AFDNIQHPFMIRTLKKIGIEGTFLKLIEAIYSKPTANIILNGVKLKSFPLRSGTRQGCPL 663

Query: 462 SPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLIFCKYDGEMLENL 521
           SP +F ++ EVL+  I     +   +G  +G +++ + L  F DD +++ +   +    L
Sbjct: 664 SPLLFNIVMEVLAIAI---REEKAIKGIHIGSEEIKLSL--FADDMIVYLENTRDSTTKL 723

Query: 522 RKTIELFEWCSG 527
            + I+ +   SG
Sbjct: 724 LEVIKEYSNVSG 729

BLAST of CmUC06G116550 vs. ExPASy Swiss-Prot
Match: Q03278 (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Nasonia vitripennis OX=7425 PE=4 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 9.7e-15
Identity = 62/245 (25.31%), Postives = 114/245 (46.53%), Query Frame = 0

Query: 278 WEKLKGHFISLFNELYTNGKLDSCVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAK 337
           W  +     SLFN +  +G+       +   LI K+   +    FRP+S+ ++  +   +
Sbjct: 345 WNSIDECIKSLFNMIMYHGQCPRRYLDSRTVLIPKEPGTMDPACFRPLSIASVALRHFHR 404

Query: 338 VLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFD 397
           +LA R+ +    ++   Q AFI    + +   + + +++E R   K  ++  LD++KAFD
Sbjct: 405 ILANRIGE--HGLLDTRQRAFIVADGVAENTSLLSAMIKEARMKIKGLYIAILDVKKAFD 464

Query: 398 RVDWTFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPF 457
            V+       LR K        +I+   +N K  + + +     I  +RG+RQGDPLSP 
Sbjct: 465 SVEHRSILDALRRKKLPLEMRNYIMWVYRNSKTRLEVVKTKGRWIRPARGVRQGDPLSPL 524

Query: 458 IFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLIFCKYDGEMLENLRKT 517
           +F  + + +      L R  +  GF++G +K+    L F DD ++      E  E L+ +
Sbjct: 525 LFNCVMDAV------LRRLPENTGFLMGAEKIGA--LVFADDLVLL----AETREGLQAS 575

Query: 518 IELFE 523
           +   E
Sbjct: 585 LSRIE 575

BLAST of CmUC06G116550 vs. ExPASy TrEMBL
Match: A0A803P8A0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 2.8e-105
Identity = 210/524 (40.08%), Postives = 298/524 (56.87%), Query Frame = 0

Query: 4   SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQC 63
           S LDRFL  NNW   F   R   LVRL SDH P+++++    WGP PFRF N+WL +   
Sbjct: 194 SRLDRFLFLNNWNVVFPFVRQEMLVRLVSDHSPVVIDSKPPKWGPGPFRFDNHWLEHKSF 253

Query: 64  VGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEESR 123
               E         GW G   +   + ++   K+W   F   Q +  K  L+  +    R
Sbjct: 254 SKCFESWWQEEIIDGWPGTKFMKKLKTLQGKAKEWS-RFTYGQNKATKNALEGRLGVLDR 313

Query: 124 AESIDLPSLEL-DLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKK 183
            E     +  L D R  L  E   +   EER++  KSK  W K GD +SRFFH  L A+K
Sbjct: 314 QEGTPSWNQSLYDERRKLKEEWQRLTFEEERSIWLKSKCKWAKEGDANSRFFHNLLNARK 373

Query: 184 RRNLIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRL 243
            RN I  +  + G+   S +EI   +I ++  LY+     G+    ++WQ +++    +L
Sbjct: 374 ARNTISRIERDNGDIIDSEKEIVEELIAFFSKLYTSETRMGTGVEGIEWQHIAEPSARQL 433

Query: 244 VASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCV 303
              F E E+R  +     +KAPG DGF +      WE +K   + +F   ++ G+++  +
Sbjct: 434 ECPFEEDEVRNIVFSCEGSKAPGPDGFSLAVFQNNWEVIKNELMEVFRAFHSEGRIEGSI 493

Query: 304 KKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGR 363
              FICLI K+ ++   KDFRPISL T VYK+IAK LA RL+ V+   I+ TQSAF+EGR
Sbjct: 494 NDTFICLIPKRLNSCKVKDFRPISLITSVYKIIAKTLATRLRGVLGETISETQSAFVEGR 553

Query: 364 QILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWIL 423
           QILD +++ANE VE+YR   KKG++LK+D EKA+DRVDW F + VLR+K F  RW  WI 
Sbjct: 554 QILDSVLLANEAVEDYRSRGKKGFVLKIDFEKAYDRVDWGFLDLVLRKKGFGERWRKWIR 613

Query: 424 GCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGF 483
           GC+ +  +SIF++ R RG+   SRG+RQGDPLSPF+F L+++VL  ++ +      F GF
Sbjct: 614 GCVSSTSFSIFVNGRVRGKFHGSRGLRQGDPLSPFLFTLVADVLGRMVDKAVETEAFSGF 673

Query: 484 IVGRDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG 527
            +G+D + +  LQF DDTL F K D + L+ L K +E F   SG
Sbjct: 674 QIGKDNIRLSHLQFADDTLFFVK-DEDSLQKLVKIVEAFCGISG 715

BLAST of CmUC06G116550 vs. ExPASy TrEMBL
Match: A0A803QEA6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 8.9e-104
Identity = 211/525 (40.19%), Postives = 299/525 (56.95%), Query Frame = 0

Query: 4    SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQC 63
            S LDRFL +NNW   F   R   LVR+ SDH P+++++    WGP PFRF N+WL +   
Sbjct: 544  SRLDRFLFTNNWNIIFPFVRQELLVRIVSDHSPVVIDSNPPKWGPGPFRFDNHWLDHKSF 603

Query: 64   VGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILD--MLVQEE 123
                ER        GW G   +   + ++  +K+W       Q R +K  L+  + V ++
Sbjct: 604  SKCFERWWKEEINDGWPGTKFMKKLKILQGKVKEWSKSTF-GQNRAKKIALEGRLGVLDK 663

Query: 124  SRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAK 183
                S    SL LD R  L  E   +   EER    KSK  W + GD +SRFFH  L A+
Sbjct: 664  LEGTSFWNQSL-LDERRKLKEEWKWLNFEEERGTWLKSKCKWAREGDANSRFFHNLLNAR 723

Query: 184  KRRNLIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSR 243
            K RN I  +    G+   + +EI   +I ++  LY+     GS    ++WQ +++    +
Sbjct: 724  KARNTISRIERENGDIIDNEKEIAEELIAFFSKLYTSEARMGSGIEGIEWQQIAESSAGQ 783

Query: 244  LVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSC 303
            L   F E E+R  +     NKAPG DGF +  L   WE +K   + +F   +  G+++  
Sbjct: 784  LECPFEEEEVRNIVFSCEGNKAPGPDGFSLAVLQHNWETIKHDLMEVFTAFHREGRIEGS 843

Query: 304  VKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEG 363
            +   FICLI K+ ++   KDFRPISL T VYK+IAK LA RL+ V+   I+ TQSAF+EG
Sbjct: 844  INDTFICLIPKRLNSCKVKDFRPISLITSVYKIIAKTLATRLRGVLGETISETQSAFVEG 903

Query: 364  RQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWI 423
            RQILD +++ANE VE+YR   +KG++LK+D EKA+DRVDW F + VLR+K F  RW  WI
Sbjct: 904  RQILDSVLMANEAVEDYRSRGRKGFVLKIDFEKAYDRVDWGFLDMVLRKKGFGERWRKWI 963

Query: 424  LGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEG 483
             GC+ +  +SIFI+ R RG+   SRG+RQGDPLSPF+F +I++VL  ++ +        G
Sbjct: 964  RGCVSSTSFSIFINGRVRGKFNGSRGLRQGDPLSPFLFTMIADVLGRMVDKAIETESLTG 1023

Query: 484  FIVGRDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG 527
            F +G+D + +  LQF DDTL F K D   L+ L K ++ F   SG
Sbjct: 1024 FQIGKDDIRLSHLQFADDTLFFVK-DEVSLQKLVKVVKAFCGISG 1065

BLAST of CmUC06G116550 vs. ExPASy TrEMBL
Match: A0A803QI00 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 1.2e-103
Identity = 199/519 (38.34%), Postives = 298/519 (57.42%), Query Frame = 0

Query: 4    SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQC 63
            S LDRFL +NNW   +   R   LVRL SDH P+++++    WGP PFRF N WL ++  
Sbjct: 1093 SRLDRFLFTNNWNVIYPFVRQEMLVRLVSDHSPVVIDSNPPRWGPGPFRFDNQWLEHNSF 1152

Query: 64   VGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEESR 123
                 R     + +GW G   +S  +  +  +K+W      + +  ++ +   LV  +  
Sbjct: 1153 PKSFGRWWKEASSNGWPGTKFMSKLKKTQEKVKEWSSSTFGQNKATKRALEGRLVALDRL 1212

Query: 124  AESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKR 183
              +       ++ R  L  E   +   EER++  KSK  W K GD +SRFFH  L A+K 
Sbjct: 1213 EGTNSWVQSLVEERRKLKEEWQQLNFEEERSIWLKSKCKWAKEGDANSRFFHNLLNARKA 1272

Query: 184  RNLIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLV 243
            RN I  +    G+      EI   +I ++  LY+     GS   +++WQ ++     +L 
Sbjct: 1273 RNTISRIEREDGSIIDKEEEIVEELIGFFSKLYTSEARRGSGIESIEWQRIAYSSACQLE 1332

Query: 244  ASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVK 303
            +SF E E+++++     +KAPG DGF +      WE +K   + +F      G+++  + 
Sbjct: 1333 SSFEEEEVKRSVFSCEGSKAPGPDGFSLAVFQNNWETIKDDLMEVFRTFEKEGRIEGSIN 1392

Query: 304  KNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQ 363
            + FICLI K+ ++   KDFRPISL T VYK++AK LA RL+ V+   I+ TQSAF+EGRQ
Sbjct: 1393 ETFICLIPKRLNSCKVKDFRPISLITSVYKIVAKTLATRLRGVLGETISETQSAFVEGRQ 1452

Query: 364  ILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILG 423
            ILD ++IANE VE++R   KKG++ K+D+EKA+DRVDW F + VL+EK F   W  WI G
Sbjct: 1453 ILDSVLIANETVEDFRSRGKKGFVFKIDLEKAYDRVDWDFLDLVLKEKGFGEVWRKWIRG 1512

Query: 424  CIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFI 483
            C+ +  +S+ I+ R RG+   SRG+RQGDPLSPF+F L+ +VL  L+ +  + + F GF 
Sbjct: 1513 CVSSTSFSLLINGRVRGKFRGSRGLRQGDPLSPFLFTLVVDVLGRLVDKAAQSDTFSGFQ 1572

Query: 484  VGRDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFE 523
            VG+D + +  LQF DDTL F K +     +LRK +E+ E
Sbjct: 1573 VGKDNIQISHLQFADDTLFFVKDEA----SLRKLVEIVE 1607

BLAST of CmUC06G116550 vs. ExPASy TrEMBL
Match: A0A803QQM3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 1.9e-101
Identity = 204/529 (38.56%), Postives = 294/529 (55.58%), Query Frame = 0

Query: 4    SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQC 63
            S LDRFL SNNW   +   R   LVRL SDH P+++++    WGP PFRF N+WL +   
Sbjct: 1117 SRLDRFLFSNNWNVIYPFVRQEMLVRLVSDHSPVVIDSNPPKWGPGPFRFDNHWLEHKSF 1176

Query: 64   VGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQE------KPILDML 123
                E         GW G   +   + ++  +K+W      + +  +        +LD L
Sbjct: 1177 SKCFESWWKEEINDGWPGTKFMKKLKLLQGKVKEWSKSTFGQNKATKIALEGRLGVLDRL 1236

Query: 124  VQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQF 183
                S  +S+      LD R  L  E   ++  EER +  KSK  W + GD +SR FH  
Sbjct: 1237 EGTSSWNQSV------LDERRKLKEEWQQLHFEEERGIWLKSKCKWAREGDANSRLFHNL 1296

Query: 184  LAAKKRRNLIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDE 243
            L A+K +N I  +  + G+   + +EI   +I ++  LY+    +G+    ++W  + + 
Sbjct: 1297 LNARKAKNTISRIERDNGDIIDNEKEIVEELIAFFSKLYTSEARSGTGIEGIEWHKIEES 1356

Query: 244  QNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGK 303
               +L   F E E+R  +     NKAPG DGF +  L   WE +K   + +F   +  G+
Sbjct: 1357 SARQLECPFEEEEVRNIVFSCEGNKAPGPDGFSLAALQNNWETIKYDLMEVFRAFHREGR 1416

Query: 304  LDSCVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSA 363
            ++  +   FICLI K+ ++   KD+RPISL T VYK+IAK LA RL+ V+   I+ TQSA
Sbjct: 1417 IEGSINDTFICLIPKRLNSCKVKDYRPISLITSVYKIIAKTLATRLRGVLGETISETQSA 1476

Query: 364  FIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRW 423
            F+EGRQILD +++ANE VE+YR   KKG +LK+D EKA+DRVDW F + V+R+K F  RW
Sbjct: 1477 FVEGRQILDSVLMANEAVEDYRSRGKKGIVLKIDFEKAYDRVDWGFLDLVMRKKGFGERW 1536

Query: 424  IAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKN 483
              WI GC+    +SIFI+ R RG+   SRG+RQ DPLSPF+F LI++VL  ++ +     
Sbjct: 1537 TKWIRGCVSTTSFSIFINGRVRGKFNGSRGLRQVDPLSPFLFTLIADVLGRMVDKAIDTE 1596

Query: 484  KFEGFIVGRDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG 527
               GF +G+D + +  LQF DDTL F K D   L+ L K +E F   SG
Sbjct: 1597 SLSGFQIGKDDIQLSHLQFADDTLFFVK-DEASLQKLVKIVEAFCGISG 1638

BLAST of CmUC06G116550 vs. ExPASy TrEMBL
Match: A0A438FWU5 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_70 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 7.1e-101
Identity = 197/521 (37.81%), Postives = 297/521 (57.01%), Query Frame = 0

Query: 6    LDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVG 65
            LDRFL S+ W+  F  +    L R  SDH PI LE     WGP+PFRF N WLL+ +   
Sbjct: 931  LDRFLFSSEWDTFFSQSFQEALPRWTSDHSPICLETNPLKWGPTPFRFENMWLLHPEFKE 990

Query: 66   IIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEESRAE 125
                        GW G   +   + VK  +K+W +      + ++K IL  L + +   +
Sbjct: 991  KFRVWWLECTGEGWEGHKFMRKLKFVKSKLKEWNIMTFGDLKERKKLILTDLSRIDLIEQ 1050

Query: 126  SIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRN 185
              +L S  +  R+    EL  +   EE    QKS++ W+K GD +S+FFH+    ++ R 
Sbjct: 1051 EGNLNSDLVLERTLKRRELEDVLLKEEVQWRQKSRVKWIKEGDCNSKFFHRVATGRRSRK 1110

Query: 186  LIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVAS 245
             I  L++ +G    +  +I   +++++  LYSK          +DW  +S E    L   
Sbjct: 1111 FIKSLISERGETLNNIEDISEEIVNFFGNLYSKPVGESWRVEGIDWVPISGESGGWLDRP 1170

Query: 246  FTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVKKN 305
            FTE E+R+A+    + KAPG DGF +    + W+ +K   + +F E +TNG ++      
Sbjct: 1171 FTEEEVRRAVFQLNKEKAPGPDGFTIAVYQECWDVIKEDLMRVFLEFHTNGVINQSTNAT 1230

Query: 306  FICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQIL 365
            FI L+ KK  ++   D+RPISL T +YK+IAKVL+ RL+KV+   I+ +Q AF+EGR IL
Sbjct: 1231 FIALVPKKSQSVKISDYRPISLVTSLYKIIAKVLSGRLRKVLHETISDSQGAFVEGRHIL 1290

Query: 366  DPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILGCI 425
            D ++IANE+V+E RR+ ++G + K+D EKA+D VDW F + VL+ K F  +W  WI GC+
Sbjct: 1291 DAVLIANEVVDEKRRSGEEGIVFKIDFEKAYDHVDWGFLDHVLQRKGFSQKWRLWIRGCL 1350

Query: 426  KNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVG 485
             +  ++I ++   +G + ASRG+RQGDPLSPF+F L+++VLS ++ R       EGF VG
Sbjct: 1351 SSSSFAILVNGNAKGWVKASRGLRQGDPLSPFLFTLVADVLSRMLFRAEETGLTEGFSVG 1410

Query: 486  RDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG 527
            RD+  V LLQF DDT+ F K   E L+NL+  + +F   SG
Sbjct: 1411 RDRTRVSLLQFADDTIFFSKASMEHLQNLKIILLVFGQVSG 1451

BLAST of CmUC06G116550 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 90.5 bits (223), Expect = 4.3e-18
Identity = 93/344 (27.03%), Postives = 146/344 (42.44%), Query Frame = 0

Query: 6   LDRFLVSNNWEEDFEDTRVTRLVRLFSDHFP-ILLEAGAFDWGPSPFRFCNNWLLNHQCV 65
           LDR + + +W   F        +   SDH P I++           FR+ +   L+    
Sbjct: 286 LDRAIANGDWFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFS--FLSTHPT 345

Query: 66  GIIERTLDSGNQ--HGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEES 125
            ++  T+    Q   G   F +  + +A K   K    +     Q + K  LD L   +S
Sbjct: 346 FLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLESIQS 405

Query: 126 RA---ESIDLPSLELDLRSSLN---AELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQ 185
           +     S  L  +E   R   N   A L S YR       QKS++ WL+ GD ++RFFH+
Sbjct: 406 QLLTNPSDSLFRVEHVARKKWNFFAAALESFYR-------QKSRIKWLQDGDANTRFFHK 465

Query: 186 FLAAKKRRNLIFELLNNQGNPTKSFREIETLVIDYYKALYSK-----LPNAGSFPSNLDW 245
            + A + +NLI  L  +     ++  +++ +++ YY  L         P++     ++  
Sbjct: 466 VILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSVQRIKDIHP 525

Query: 246 QSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNE 305
              +D   SRL A  ++ EI  A+    RNKAPG D F  EF  + W  +K   I+   E
Sbjct: 526 FRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKE 585

Query: 306 LYTNGKLDSCVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVI 336
            +  G L        I LI K         FRP+S  T+VYK+I
Sbjct: 586 FFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTVVYKII 620

BLAST of CmUC06G116550 vs. TAIR 10
Match: AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )

HSP 1 Score: 68.2 bits (165), Expect = 2.3e-11
Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 0

Query: 339 LAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNR-KKGW-LLKLDMEKAF 398
           + +RLK +M ++I P Q++FI GR   D I+   E V   RR +  KGW LLKLD+EKA+
Sbjct: 1   MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60

Query: 399 DRVDWTFSEKVLREKNFDTRWI 419
           DR+ W + E  L    F   W+
Sbjct: 61  DRIRWDYLEDTLISAGFPEVWL 82

BLAST of CmUC06G116550 vs. TAIR 10
Match: ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )

HSP 1 Score: 64.3 bits (155), Expect = 3.3e-10
Identity = 31/72 (43.06%), Postives = 44/72 (61.11%), Query Frame = 0

Query: 430 YSIF-ISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDK 489
           Y +F I+  P+G +  SRG+RQGDPLSP++F+L +EVLS L  R   + +  G  V  + 
Sbjct: 9   YLLFIINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNS 68

Query: 490 VHVPLLQFVDDT 501
             +  L F DDT
Sbjct: 69  PRINHLLFADDT 80

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RVW64408.11.5e-10037.81LINE-1 retrotransposable element ORF2 protein [Vitis vinifera][more]
TYJ99326.15.5e-10038.97LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa][more]
RVW90400.17.2e-10038.39Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera][more]
RVW65579.11.2e-9938.39Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera][more]
KAA0039950.12.1e-9938.24LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK245... [more]
Match NameE-valueIdentityDescription
P143812.8e-3826.41Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... [more]
O003701.7e-3526.46LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1[more]
P113692.5e-3130.86LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... [more]
P085482.4e-2926.16LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1[more]
Q032789.7e-1525.31Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fra... [more]
Match NameE-valueIdentityDescription
A0A803P8A02.8e-10540.08Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QEA68.9e-10440.19Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QI001.2e-10338.34Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QQM31.9e-10138.56Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A438FWU57.1e-10137.81LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF... [more]
Match NameE-valueIdentityDescription
AT1G43760.14.3e-1827.03DNAse I-like superfamily protein [more]
AT4G20520.12.3e-1142.68RNA binding;RNA-directed DNA polymerases [more]
ATMG01250.13.3e-1043.06RNA-directed DNA polymerase (reverse transcriptase) [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 311..517
e-value: 1.2E-37
score: 129.6
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 291..526
score: 15.16881
NoneNo IPR availablePANTHERPTHR33116:SF38OS01G0158850 PROTEINcoord: 12..475
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 12..475
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 307..526
e-value: 1.29512E-46
score: 160.149
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 253..519
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 5..40

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC06G116550.1CmUC06G116550.1mRNA