Homology
BLAST of CmUC06G116550 vs. NCBI nr
Match:
RVW64408.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])
HSP 1 Score: 377.9 bits (969), Expect = 1.5e-100
Identity = 197/521 (37.81%), Postives = 297/521 (57.01%), Query Frame = 0
Query: 6 LDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVG 65
LDRFL S+ W+ F + L R SDH PI LE WGP+PFRF N WLL+ +
Sbjct: 931 LDRFLFSSEWDTFFSQSFQEALPRWTSDHSPICLETNPLKWGPTPFRFENMWLLHPEFKE 990
Query: 66 IIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEESRAE 125
GW G + + VK +K+W + + ++K IL L + + +
Sbjct: 991 KFRVWWLECTGEGWEGHKFMRKLKFVKSKLKEWNIMTFGDLKERKKLILTDLSRIDLIEQ 1050
Query: 126 SIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRN 185
+L S + R+ EL + EE QKS++ W+K GD +S+FFH+ ++ R
Sbjct: 1051 EGNLNSDLVLERTLKRRELEDVLLKEEVQWRQKSRVKWIKEGDCNSKFFHRVATGRRSRK 1110
Query: 186 LIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVAS 245
I L++ +G + +I +++++ LYSK +DW +S E L
Sbjct: 1111 FIKSLISERGETLNNIEDISEEIVNFFGNLYSKPVGESWRVEGIDWVPISGESGGWLDRP 1170
Query: 246 FTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVKKN 305
FTE E+R+A+ + KAPG DGF + + W+ +K + +F E +TNG ++
Sbjct: 1171 FTEEEVRRAVFQLNKEKAPGPDGFTIAVYQECWDVIKEDLMRVFLEFHTNGVINQSTNAT 1230
Query: 306 FICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQIL 365
FI L+ KK ++ D+RPISL T +YK+IAKVL+ RL+KV+ I+ +Q AF+EGR IL
Sbjct: 1231 FIALVPKKSQSVKISDYRPISLVTSLYKIIAKVLSGRLRKVLHETISDSQGAFVEGRHIL 1290
Query: 366 DPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILGCI 425
D ++IANE+V+E RR+ ++G + K+D EKA+D VDW F + VL+ K F +W WI GC+
Sbjct: 1291 DAVLIANEVVDEKRRSGEEGIVFKIDFEKAYDHVDWGFLDHVLQRKGFSQKWRLWIRGCL 1350
Query: 426 KNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVG 485
+ ++I ++ +G + ASRG+RQGDPLSPF+F L+++VLS ++ R EGF VG
Sbjct: 1351 SSSSFAILVNGNAKGWVKASRGLRQGDPLSPFLFTLVADVLSRMLFRAEETGLTEGFSVG 1410
Query: 486 RDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG 527
RD+ V LLQF DDT+ F K E L+NL+ + +F SG
Sbjct: 1411 RDRTRVSLLQFADDTIFFSKASMEHLQNLKIILLVFGQVSG 1451
BLAST of CmUC06G116550 vs. NCBI nr
Match:
TYJ99326.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 375.9 bits (964), Expect = 5.5e-100
Identity = 205/526 (38.97%), Postives = 311/526 (59.13%), Query Frame = 0
Query: 4 SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQC 63
S LDRFL S WE F L R SDHFPI+LE+ + WGPSPFRF N +L +
Sbjct: 122 SRLDRFLFSTQWENIFPGHTSKVLTRTTSDHFPIVLESSSISWGPSPFRFTNAYLKDPDY 181
Query: 64 VGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEK---PILDMLVQE 123
IE + +Q G+AG+ + + + + +K W E K + +K +D++ +
Sbjct: 182 KRNIEFWWGNTSQPGFAGYSFMHRLKQLAMKIKAWGREKKGKDEASKKAWIKEIDLINKL 241
Query: 124 ESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAA 183
E+ S + + + R +L A+L I TE + QK K W+ GDE+S FFH+ A
Sbjct: 242 EAEGTSTE---IHREKRIALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFHKICTA 301
Query: 184 KKRRNLIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNS 243
++++ LI +++N G + +I I +++ +Y+ N+ F NLDW +S+ +
Sbjct: 302 RQKKCLISKIINICGQNCLNDSDIVDAFIQHFEEIYTDNRNSHLFIDNLDWCPISNTNSG 361
Query: 244 RLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDS 303
L F E EI LK F +NKAPG DGF ++FL K W +K + +F + ++N ++
Sbjct: 362 LLDKPFNEAEIWLTLKSFAKNKAPGPDGFTMDFLQKSWSFMKQNICDIFKDFHSNHTINK 421
Query: 304 CVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIE 363
V + I I KK++ DFRPISLTT +YK+IAKVLA RLK+ +P I+ +Q AF++
Sbjct: 422 VVNETLITFIAKKENCETVADFRPISLTTAIYKLIAKVLADRLKQTLPDTISESQMAFVK 481
Query: 364 GRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAW 423
GRQI + I+IANE ++ +R +++G+++KLD+EKAFD+++W F + +L +KN+ +W
Sbjct: 482 GRQITEAILIANEALDLWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMKKNYSQKWRKM 541
Query: 424 ILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFE 483
I CI + +YSI I+ RPRGRI SRGIRQGDPLSPFIF+L + LS L++ L K K
Sbjct: 542 IASCISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKGKIN 601
Query: 484 GFIVGRDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG 527
G G +++ + F DD LIF + + + NL+ + LFE SG
Sbjct: 602 GVNFG-PNLNLTHILFADDILIFVEDKDDYVSNLKMILHLFESASG 643
BLAST of CmUC06G116550 vs. NCBI nr
Match:
RVW90400.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])
HSP 1 Score: 375.6 bits (963), Expect = 7.2e-100
Identity = 200/521 (38.39%), Postives = 292/521 (56.05%), Query Frame = 0
Query: 6 LDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVG 65
LDRFL SN WE+ F + L R SDH+PI+LE F WGP+PFRF N WL +
Sbjct: 209 LDRFLYSNEWEQVFPQSLQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHSSFKE 268
Query: 66 IIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEESRAE 125
R +GW G + + VK +K+W + +++K IL +L +S +
Sbjct: 269 NFGRWWSEFQGNGWEGHKFMRKLQFVKAKLKEWNKTSFGELSKKKKDILAVLANFDSLEQ 328
Query: 126 SIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRN 185
L L R+ EL + EE + QK+++ W+K GD +S+FFH+ ++ R
Sbjct: 329 EGGLSHERLVQRAFSKGELEELILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRK 388
Query: 186 LIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVAS 245
I EL N G + I+ ++ Y++ LY+ LDW + E SRL
Sbjct: 389 FIKELENESGLMLNNPESIKEEILKYFEKLYASPSGESWRVEGLDWSPIDGESASRLEFP 448
Query: 246 FTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVKKN 305
FTE EI KA+ R+KAPG DGF + W+ +K + +F E + +G ++ +
Sbjct: 449 FTEEEIYKAIFQMDRDKAPGPDGFTIAVFQDCWDVIKEDLVRVFTEFHRSGIINQSTNAS 508
Query: 306 FICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQIL 365
FI LI KK + D+RPISL T +YK+IAKVLA RL+ V+ I TQ AF++GRQIL
Sbjct: 509 FIVLIPKKSMSRRISDYRPISLITSLYKIIAKVLAGRLRGVLHETIHSTQGAFVQGRQIL 568
Query: 366 DPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILGCI 425
D ++IANEIV+E RR ++G + K+D EKA+D V W F + VL K F RW W+ GC+
Sbjct: 569 DAVLIANEIVDEKRRTGEEGVVFKIDFEKAYDHVSWDFLDHVLEMKGFSLRWRKWMRGCL 628
Query: 426 KNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVG 485
+ Y++ ++ +G + ASRG+RQGDPLSPF+F ++++VLS ++ + +N EGF VG
Sbjct: 629 SSVSYAVLVNGNAKGWVKASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEGFRVG 688
Query: 486 RDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG 527
R++ V LQF DDT+ F E L L+ + +F SG
Sbjct: 689 RNRTRVSHLQFADDTIFFSSTREEDLMTLKSVLLVFGHISG 729
BLAST of CmUC06G116550 vs. NCBI nr
Match:
RVW65579.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])
HSP 1 Score: 374.8 bits (961), Expect = 1.2e-99
Identity = 200/521 (38.39%), Postives = 293/521 (56.24%), Query Frame = 0
Query: 6 LDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVG 65
LDRFL SN WE+ F + L R SDH+PI+LE F WGP+PFRF N WL +
Sbjct: 196 LDRFLYSNEWEQVFPQSLQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHSSFKE 255
Query: 66 IIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEESRAE 125
R +GW G + + VK +K+W + +++K IL +L +S +
Sbjct: 256 NFGRWWSEFQGNGWEGHKFMRKLQFVKAKLKEWNKTSFGELSKKKKDILAVLANFDSLEQ 315
Query: 126 SIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRN 185
L L R+ EL + EE + QK+++ W+K GD +S+FFH+ ++ R
Sbjct: 316 EGGLSQELLVQRAFSKGELEELILREEIHWRQKARVKWVKKGDCNSKFFHKVANGRRNRK 375
Query: 186 LIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVAS 245
I EL N G + I+ ++ Y++ LY+ LDW + E SRL +
Sbjct: 376 FIKELENESGLMLNNPESIKEEILKYFEKLYACPSRESWRVEGLDWSPIDGESASRLESP 435
Query: 246 FTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVKKN 305
FTE EI KA+ R+KAPG DGF + W+ +K + +F E + +G ++ +
Sbjct: 436 FTEEEIYKAIFQMDRDKAPGPDGFTIAVFQDCWDVIKEDLVRVFAEFHRSGIINQSTNAS 495
Query: 306 FICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQIL 365
FI L+ KK + DFRPISL T +YK+IAKVLA RL+ V+ I TQ AF++GRQIL
Sbjct: 496 FIVLLPKKSISRRISDFRPISLITSLYKIIAKVLAGRLRGVLHETIHSTQGAFVQGRQIL 555
Query: 366 DPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILGCI 425
D ++IANEIV+E RR ++G + K+D EKA+D V W F + VL K F RW W+ GC+
Sbjct: 556 DAVLIANEIVDEKRRTGEEGVVFKIDFEKAYDHVSWDFLDHVLEMKGFSLRWRKWMRGCL 615
Query: 426 KNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVG 485
+ Y++ ++ +G + ASRG+RQGDPLSPF+F ++++VLS ++ + +N EGF VG
Sbjct: 616 SSVSYAVLVNGNAKGWVKASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEGFRVG 675
Query: 486 RDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG 527
R++ V LQF DDT+ F E L L+ + +F SG
Sbjct: 676 RNRTRVSHLQFADDTIFFSSTREEDLMTLKSVLLVFGHISG 716
BLAST of CmUC06G116550 vs. NCBI nr
Match:
KAA0039950.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK24553.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 374.0 bits (959), Expect = 2.1e-99
Identity = 200/523 (38.24%), Postives = 306/523 (58.51%), Query Frame = 0
Query: 4 SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQC 63
S LDRFL ++ WE F L R SDHFPI+LE+ WGPSPFRF N +L +
Sbjct: 122 SRLDRFLFTSQWENIFPGHTSKVLTRTTSDHFPIVLESSTISWGPSPFRFTNAYLKDPDY 181
Query: 64 VGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEESR 123
IE + +Q G+AG+ + + + + +K W + K + +K + + Q +
Sbjct: 182 KKNIEFWWGNTSQPGYAGYSFMRRLKQLALIIKTWGRDKKGKNEASKKACIKEIDQIDKL 241
Query: 124 AESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKR 183
+ + R++L A+L I TE + QK K W+ GDE+S FFH+ A+++
Sbjct: 242 EAEGSATEIHREKRTALKADLSQINLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQK 301
Query: 184 RNLIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLV 243
+ LI +++NN G + +I I +++ +Y+ N+ F NLDW +S+ + L
Sbjct: 302 KCLISKIINNSGQNCLNDSDIADAFIQHFEDIYTDNRNSQLFIENLDWCPISNINSELLD 361
Query: 244 ASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVK 303
F E EI LK F +NKAPG DG+ ++FL K W +K + +F + ++ ++ V
Sbjct: 362 KPFNEAEIWLTLKSFAKNKAPGPDGYAMDFLQKSWSFMKQNICDIFKDFHSTHIINKVVN 421
Query: 304 KNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQ 363
+ I LI KK+ DFRPISLTT +YK+IAK LA RLK+ +P I+ +Q AF++GRQ
Sbjct: 422 ETLITLIAKKEHCETAADFRPISLTTAIYKLIAKTLADRLKQTLPDTISESQMAFVKGRQ 481
Query: 364 ILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILG 423
I + I+IANE ++ +R +++G+++KLD+EKAFD+++W F + VL +KN+ +W I
Sbjct: 482 ITEAILIANEALDFWRSKKERGFVIKLDIEKAFDKLNWRFIDFVLMKKNYSQKWRKMIAS 541
Query: 424 CIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFI 483
CI + +YSI I+ RPRGRI SRGIRQGDPLSPFIF+L + LS L++ L K K G +
Sbjct: 542 CISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKRKING-V 601
Query: 484 VGRDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG 527
+++ + F DD LIF + + + NL+ + LFE SG
Sbjct: 602 KFSPNLNLTHILFADDILIFVEDRDDYVSNLKMILHLFESASG 643
BLAST of CmUC06G116550 vs. ExPASy Swiss-Prot
Match:
P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)
HSP 1 Score: 161.4 bits (407), Expect = 2.8e-38
Identity = 136/515 (26.41%), Postives = 233/515 (45.24%), Query Frame = 0
Query: 1 MSRSLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGP-SPFRFCNNWLL 60
+S+S +DR +S++ + + + + FSDH + L P + + NN LL
Sbjct: 199 VSQSRIDRIYISSHLMSRAQSSTIR--LAPFSDHNCVSLRMSIAPSLPKAAYWHFNNSLL 258
Query: 61 NHQCVGIIERTLDSGNQHGWAG----FIILSNFRAV-KVSMKKWQVEFIRKQQRQEKPIL 120
+ G + D+ GW F L+ + V KV +K E+ + Q +
Sbjct: 259 EDE--GFAKSVRDT--WRGWRAFQDEFATLNQWWDVGKVHLKLLCQEYTKSVSGQRNAEI 318
Query: 121 DMLVQE----ESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDES 180
+ L E E R + +L+ + A L ++ + + R +S++ L D
Sbjct: 319 EALNGEVLDLEQRLSGSEDQALQCEYLERKEA-LRNMEQRQARGAFVRSRMQLLCDMDRG 378
Query: 181 SRFFHQFLAAKKRRNLIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLD 240
SRFF+ K R I L G P + I +Y+ L+S P + L
Sbjct: 379 SRFFYALEKKKGNRKQITCLFAEDGTPLEDPEAIRDRARSFYQNLFSPDPISPDACEEL- 438
Query: 241 WQS---VSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFIS 300
W VS+ + RL T E+ +AL+ NK+PGLDG +EF FW+ L F
Sbjct: 439 WDGLPVVSERRKERLETPITLDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHR 498
Query: 301 LFNELYTNGKLDSCVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVM 360
+ E + G+L ++ + L+ KK D + K++RP+SL + YK++AK ++ RLK V+
Sbjct: 499 VLTEAFKKGELPLSCRRAVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVL 558
Query: 361 PSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKV 420
+I P QS + GR I D + + +++ RR L LD EKAFDRVD +
Sbjct: 559 AEVIHPDQSYTVPGRTIFDNVFLIRDLLHFARRTGLSLAFLSLDQEKAFDRVDHQYLIGT 618
Query: 421 LREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLS 480
L+ +F +++ ++ + + + I+ + RG+RQG PLS ++ L E
Sbjct: 619 LQAYSFGPQFVGYLKTMYASAECLVKINWSLTAPLAFGRGVRQGCPLSGQLYSLAIEPFL 678
Query: 481 SLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLI 503
L+ + + G ++ + V L + DD ++
Sbjct: 679 CLL-----RKRLTGLVLKEPDMRVVLSAYADDVIL 700
BLAST of CmUC06G116550 vs. ExPASy Swiss-Prot
Match:
O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)
HSP 1 Score: 152.1 bits (383), Expect = 1.7e-35
Identity = 122/461 (26.46%), Postives = 218/461 (47.29%), Query Frame = 0
Query: 72 DSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEESRAESIDLPS 131
D+ Q+ W F + + + ++ K RKQ+R + L ++E + E +
Sbjct: 281 DTTYQNLWDAFKAVCRGKFIALNAYK------RKQERSKIDTLTSQLKELEKQEQTHSKA 340
Query: 132 LELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRNLIFELL 191
+ + AEL I + I +S+ + + ++ R + + K+ +N I +
Sbjct: 341 SRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDRPLARLIKKKREKNQIDTIK 400
Query: 192 NNQGNPTKSFREIETLVIDYYKALY-SKLPNAGSFPSNLDWQS---VSDEQNSRLVASFT 251
N++G+ T EI+T + +YYK LY +KL N + LD + ++ E+ L T
Sbjct: 401 NDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLPRLNQEEVESLNRPIT 460
Query: 252 EGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKL-DSCVKKNF 311
EI + K+PG DGF EF ++ E+L + LF + G L +S + +
Sbjct: 461 GSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASI 520
Query: 312 ICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQILD 371
I + K +D ++FRPISL I K++ K+LA R+++ + +I Q FI G Q
Sbjct: 521 ILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWF 580
Query: 372 PIIIANEIVEEYRRNRKKGW-LLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILGCI 431
I + +++ R + K ++ +D EKAFD++ F K L + D ++ I
Sbjct: 581 NIRKSINVIQHINRAKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIY 640
Query: 432 KNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVG 491
P +I ++ + G RQG PLSP +F ++ EVL+ I ++ + +G +G
Sbjct: 641 DKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAI---RQEKEIKGIQLG 700
Query: 492 RDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG 527
+++V + L F DD +++ + +NL K I F SG
Sbjct: 701 KEEVKLSL--FADDMIVYLENPIVSAQNLLKLISNFSKVSG 730
BLAST of CmUC06G116550 vs. ExPASy Swiss-Prot
Match:
P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)
HSP 1 Score: 138.3 bits (347), Expect = 2.5e-31
Identity = 100/324 (30.86%), Postives = 160/324 (49.38%), Query Frame = 0
Query: 186 LIFELLNNQGNPTKSFREIETLVIDYYKALYS-KLPNAGSFPSNLDWQSV---SDEQNSR 245
LI ++ N +G+ T EI+ + +YK LYS KL N LD V + +Q
Sbjct: 396 LINKIRNEKGDITTDPEEIQNTIRSFYKRLYSTKLENLDEMDKFLDRYQVPKLNQDQVDH 455
Query: 246 LVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSC 305
L + + EI + K+PG DGF EF F E L LF+++ G L +
Sbjct: 456 LNSPISPKEIEAVINSLPTKKSPGPDGFSAEFYQTFKEDLIPILHKLFHKIEVEGTLPNS 515
Query: 306 VKKNFICLI-KKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIE 365
+ I LI K +KD ++FRPISL I K++ K+LA R+++ + +II P Q FI
Sbjct: 516 FYEATITLIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIP 575
Query: 366 GRQILDPIIIANEIVEEYRRNRKKG-WLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIA 425
G Q I + ++ + + K ++ LD EKAFD++ F KVL ++
Sbjct: 576 GMQGWFNIRKSINVIHYINKLKDKNHMIISLDAEKAFDKIQHPFMIKVLERSGIQGPYLN 635
Query: 426 WILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKF 485
I P +I ++ I G RQG PLSP++F ++ EVL+ I ++ +
Sbjct: 636 MIKAIYSKPVANIKVNGEKLEAIPLKSGTRQGCPLSPYLFNIVLEVLARAI---RQQKEI 695
Query: 486 EGFIVGRDKVHVPLLQFVDDTLIF 504
+G +G+++V + LL DD +++
Sbjct: 696 KGIQIGKEEVKISLL--ADDMIVY 714
BLAST of CmUC06G116550 vs. ExPASy Swiss-Prot
Match:
P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)
HSP 1 Score: 131.7 bits (330), Expect = 2.4e-29
Identity = 113/432 (26.16%), Postives = 199/432 (46.06%), Query Frame = 0
Query: 102 FIRKQQRQE-KPILDMLVQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSK 161
F++K +R+E ++ L Q E S PS ++ + + AEL I I KSK
Sbjct: 304 FLKKTEREEVNNLMGHLKQLEKEEHSNPKPSRRKEI-TKIRAELNEIENKRIIQQINKSK 363
Query: 162 LNWLKLGDESSRFFHQFLAAKKRRNLIFELLNNQGNPTKSFREIETLVIDYYKALYS-KL 221
+ + ++ + K+ ++LI + N T EI+ ++ +YYK LYS K
Sbjct: 364 SWFFEKINKIDKPLANLTRKKRVKSLISSIRNGNDEITTDPSEIQKILNEYYKKLYSHKY 423
Query: 222 PNAGSFPSNLD---WQSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIK 281
N L+ +S ++ L + EI +++ + K+PG DGF EF
Sbjct: 424 ENLKEIDQYLEACHLPRLSQKEVEMLNRPISSSEIASTIQNLPKKKSPGPDGFTSEFYQT 483
Query: 282 FWEKLKGHFISLFNELYTNGKLDSCVKKNFICLIKKK-KDAIVTKDFRPISLTTIVYKVI 341
F E+L ++LF + G L + + I LI K KD +++RPISL I K++
Sbjct: 484 FKEELVPILLNLFQNIEKEGILPNTFYEANITLIPKPGKDPTRKENYRPISLMNIDAKIL 543
Query: 342 AKVLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKG-WLLKLDMEK 401
K+L R+++ + II Q FI G Q I + +++ + + K +L +D EK
Sbjct: 544 NKILTNRIQQHIKKIIHHDQVGFIPGSQGWFNIRKSINVIQHINKLKNKDHMILSIDAEK 603
Query: 402 AFDRVDWTFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPL 461
AFD + F + L++ + ++ I P +I ++ G RQG PL
Sbjct: 604 AFDNIQHPFMIRTLKKIGIEGTFLKLIEAIYSKPTANIILNGVKLKSFPLRSGTRQGCPL 663
Query: 462 SPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLIFCKYDGEMLENL 521
SP +F ++ EVL+ I + +G +G +++ + L F DD +++ + + L
Sbjct: 664 SPLLFNIVMEVLAIAI---REEKAIKGIHIGSEEIKLSL--FADDMIVYLENTRDSTTKL 723
Query: 522 RKTIELFEWCSG 527
+ I+ + SG
Sbjct: 724 LEVIKEYSNVSG 729
BLAST of CmUC06G116550 vs. ExPASy Swiss-Prot
Match:
Q03278 (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Nasonia vitripennis OX=7425 PE=4 SV=2)
HSP 1 Score: 83.2 bits (204), Expect = 9.7e-15
Identity = 62/245 (25.31%), Postives = 114/245 (46.53%), Query Frame = 0
Query: 278 WEKLKGHFISLFNELYTNGKLDSCVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAK 337
W + SLFN + +G+ + LI K+ + FRP+S+ ++ + +
Sbjct: 345 WNSIDECIKSLFNMIMYHGQCPRRYLDSRTVLIPKEPGTMDPACFRPLSIASVALRHFHR 404
Query: 338 VLAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFD 397
+LA R+ + ++ Q AFI + + + + +++E R K ++ LD++KAFD
Sbjct: 405 ILANRIGE--HGLLDTRQRAFIVADGVAENTSLLSAMIKEARMKIKGLYIAILDVKKAFD 464
Query: 398 RVDWTFSEKVLREKNFDTRWIAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPF 457
V+ LR K +I+ +N K + + + I +RG+RQGDPLSP
Sbjct: 465 SVEHRSILDALRRKKLPLEMRNYIMWVYRNSKTRLEVVKTKGRWIRPARGVRQGDPLSPL 524
Query: 458 IFLLISEVLSSLISRLHRKNKFEGFIVGRDKVHVPLLQFVDDTLIFCKYDGEMLENLRKT 517
+F + + + L R + GF++G +K+ L F DD ++ E E L+ +
Sbjct: 525 LFNCVMDAV------LRRLPENTGFLMGAEKIGA--LVFADDLVLL----AETREGLQAS 575
Query: 518 IELFE 523
+ E
Sbjct: 585 LSRIE 575
BLAST of CmUC06G116550 vs. ExPASy TrEMBL
Match:
A0A803P8A0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 392.5 bits (1007), Expect = 2.8e-105
Identity = 210/524 (40.08%), Postives = 298/524 (56.87%), Query Frame = 0
Query: 4 SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQC 63
S LDRFL NNW F R LVRL SDH P+++++ WGP PFRF N+WL +
Sbjct: 194 SRLDRFLFLNNWNVVFPFVRQEMLVRLVSDHSPVVIDSKPPKWGPGPFRFDNHWLEHKSF 253
Query: 64 VGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEESR 123
E GW G + + ++ K+W F Q + K L+ + R
Sbjct: 254 SKCFESWWQEEIIDGWPGTKFMKKLKTLQGKAKEWS-RFTYGQNKATKNALEGRLGVLDR 313
Query: 124 AESIDLPSLEL-DLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKK 183
E + L D R L E + EER++ KSK W K GD +SRFFH L A+K
Sbjct: 314 QEGTPSWNQSLYDERRKLKEEWQRLTFEEERSIWLKSKCKWAKEGDANSRFFHNLLNARK 373
Query: 184 RRNLIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRL 243
RN I + + G+ S +EI +I ++ LY+ G+ ++WQ +++ +L
Sbjct: 374 ARNTISRIERDNGDIIDSEKEIVEELIAFFSKLYTSETRMGTGVEGIEWQHIAEPSARQL 433
Query: 244 VASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCV 303
F E E+R + +KAPG DGF + WE +K + +F ++ G+++ +
Sbjct: 434 ECPFEEDEVRNIVFSCEGSKAPGPDGFSLAVFQNNWEVIKNELMEVFRAFHSEGRIEGSI 493
Query: 304 KKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGR 363
FICLI K+ ++ KDFRPISL T VYK+IAK LA RL+ V+ I+ TQSAF+EGR
Sbjct: 494 NDTFICLIPKRLNSCKVKDFRPISLITSVYKIIAKTLATRLRGVLGETISETQSAFVEGR 553
Query: 364 QILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWIL 423
QILD +++ANE VE+YR KKG++LK+D EKA+DRVDW F + VLR+K F RW WI
Sbjct: 554 QILDSVLLANEAVEDYRSRGKKGFVLKIDFEKAYDRVDWGFLDLVLRKKGFGERWRKWIR 613
Query: 424 GCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGF 483
GC+ + +SIF++ R RG+ SRG+RQGDPLSPF+F L+++VL ++ + F GF
Sbjct: 614 GCVSSTSFSIFVNGRVRGKFHGSRGLRQGDPLSPFLFTLVADVLGRMVDKAVETEAFSGF 673
Query: 484 IVGRDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG 527
+G+D + + LQF DDTL F K D + L+ L K +E F SG
Sbjct: 674 QIGKDNIRLSHLQFADDTLFFVK-DEDSLQKLVKIVEAFCGISG 715
BLAST of CmUC06G116550 vs. ExPASy TrEMBL
Match:
A0A803QEA6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 387.5 bits (994), Expect = 8.9e-104
Identity = 211/525 (40.19%), Postives = 299/525 (56.95%), Query Frame = 0
Query: 4 SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQC 63
S LDRFL +NNW F R LVR+ SDH P+++++ WGP PFRF N+WL +
Sbjct: 544 SRLDRFLFTNNWNIIFPFVRQELLVRIVSDHSPVVIDSNPPKWGPGPFRFDNHWLDHKSF 603
Query: 64 VGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILD--MLVQEE 123
ER GW G + + ++ +K+W Q R +K L+ + V ++
Sbjct: 604 SKCFERWWKEEINDGWPGTKFMKKLKILQGKVKEWSKSTF-GQNRAKKIALEGRLGVLDK 663
Query: 124 SRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAK 183
S SL LD R L E + EER KSK W + GD +SRFFH L A+
Sbjct: 664 LEGTSFWNQSL-LDERRKLKEEWKWLNFEEERGTWLKSKCKWAREGDANSRFFHNLLNAR 723
Query: 184 KRRNLIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSR 243
K RN I + G+ + +EI +I ++ LY+ GS ++WQ +++ +
Sbjct: 724 KARNTISRIERENGDIIDNEKEIAEELIAFFSKLYTSEARMGSGIEGIEWQQIAESSAGQ 783
Query: 244 LVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSC 303
L F E E+R + NKAPG DGF + L WE +K + +F + G+++
Sbjct: 784 LECPFEEEEVRNIVFSCEGNKAPGPDGFSLAVLQHNWETIKHDLMEVFTAFHREGRIEGS 843
Query: 304 VKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEG 363
+ FICLI K+ ++ KDFRPISL T VYK+IAK LA RL+ V+ I+ TQSAF+EG
Sbjct: 844 INDTFICLIPKRLNSCKVKDFRPISLITSVYKIIAKTLATRLRGVLGETISETQSAFVEG 903
Query: 364 RQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWI 423
RQILD +++ANE VE+YR +KG++LK+D EKA+DRVDW F + VLR+K F RW WI
Sbjct: 904 RQILDSVLMANEAVEDYRSRGRKGFVLKIDFEKAYDRVDWGFLDMVLRKKGFGERWRKWI 963
Query: 424 LGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEG 483
GC+ + +SIFI+ R RG+ SRG+RQGDPLSPF+F +I++VL ++ + G
Sbjct: 964 RGCVSSTSFSIFINGRVRGKFNGSRGLRQGDPLSPFLFTMIADVLGRMVDKAIETESLTG 1023
Query: 484 FIVGRDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG 527
F +G+D + + LQF DDTL F K D L+ L K ++ F SG
Sbjct: 1024 FQIGKDDIRLSHLQFADDTLFFVK-DEVSLQKLVKVVKAFCGISG 1065
BLAST of CmUC06G116550 vs. ExPASy TrEMBL
Match:
A0A803QI00 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 387.1 bits (993), Expect = 1.2e-103
Identity = 199/519 (38.34%), Postives = 298/519 (57.42%), Query Frame = 0
Query: 4 SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQC 63
S LDRFL +NNW + R LVRL SDH P+++++ WGP PFRF N WL ++
Sbjct: 1093 SRLDRFLFTNNWNVIYPFVRQEMLVRLVSDHSPVVIDSNPPRWGPGPFRFDNQWLEHNSF 1152
Query: 64 VGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEESR 123
R + +GW G +S + + +K+W + + ++ + LV +
Sbjct: 1153 PKSFGRWWKEASSNGWPGTKFMSKLKKTQEKVKEWSSSTFGQNKATKRALEGRLVALDRL 1212
Query: 124 AESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKR 183
+ ++ R L E + EER++ KSK W K GD +SRFFH L A+K
Sbjct: 1213 EGTNSWVQSLVEERRKLKEEWQQLNFEEERSIWLKSKCKWAKEGDANSRFFHNLLNARKA 1272
Query: 184 RNLIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLV 243
RN I + G+ EI +I ++ LY+ GS +++WQ ++ +L
Sbjct: 1273 RNTISRIEREDGSIIDKEEEIVEELIGFFSKLYTSEARRGSGIESIEWQRIAYSSACQLE 1332
Query: 244 ASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVK 303
+SF E E+++++ +KAPG DGF + WE +K + +F G+++ +
Sbjct: 1333 SSFEEEEVKRSVFSCEGSKAPGPDGFSLAVFQNNWETIKDDLMEVFRTFEKEGRIEGSIN 1392
Query: 304 KNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQ 363
+ FICLI K+ ++ KDFRPISL T VYK++AK LA RL+ V+ I+ TQSAF+EGRQ
Sbjct: 1393 ETFICLIPKRLNSCKVKDFRPISLITSVYKIVAKTLATRLRGVLGETISETQSAFVEGRQ 1452
Query: 364 ILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILG 423
ILD ++IANE VE++R KKG++ K+D+EKA+DRVDW F + VL+EK F W WI G
Sbjct: 1453 ILDSVLIANETVEDFRSRGKKGFVFKIDLEKAYDRVDWDFLDLVLKEKGFGEVWRKWIRG 1512
Query: 424 CIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFI 483
C+ + +S+ I+ R RG+ SRG+RQGDPLSPF+F L+ +VL L+ + + + F GF
Sbjct: 1513 CVSSTSFSLLINGRVRGKFRGSRGLRQGDPLSPFLFTLVVDVLGRLVDKAAQSDTFSGFQ 1572
Query: 484 VGRDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFE 523
VG+D + + LQF DDTL F K + +LRK +E+ E
Sbjct: 1573 VGKDNIQISHLQFADDTLFFVKDEA----SLRKLVEIVE 1607
BLAST of CmUC06G116550 vs. ExPASy TrEMBL
Match:
A0A803QQM3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 379.8 bits (974), Expect = 1.9e-101
Identity = 204/529 (38.56%), Postives = 294/529 (55.58%), Query Frame = 0
Query: 4 SLLDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQC 63
S LDRFL SNNW + R LVRL SDH P+++++ WGP PFRF N+WL +
Sbjct: 1117 SRLDRFLFSNNWNVIYPFVRQEMLVRLVSDHSPVVIDSNPPKWGPGPFRFDNHWLEHKSF 1176
Query: 64 VGIIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQE------KPILDML 123
E GW G + + ++ +K+W + + + +LD L
Sbjct: 1177 SKCFESWWKEEINDGWPGTKFMKKLKLLQGKVKEWSKSTFGQNKATKIALEGRLGVLDRL 1236
Query: 124 VQEESRAESIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQF 183
S +S+ LD R L E ++ EER + KSK W + GD +SR FH
Sbjct: 1237 EGTSSWNQSV------LDERRKLKEEWQQLHFEEERGIWLKSKCKWAREGDANSRLFHNL 1296
Query: 184 LAAKKRRNLIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDE 243
L A+K +N I + + G+ + +EI +I ++ LY+ +G+ ++W + +
Sbjct: 1297 LNARKAKNTISRIERDNGDIIDNEKEIVEELIAFFSKLYTSEARSGTGIEGIEWHKIEES 1356
Query: 244 QNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGK 303
+L F E E+R + NKAPG DGF + L WE +K + +F + G+
Sbjct: 1357 SARQLECPFEEEEVRNIVFSCEGNKAPGPDGFSLAALQNNWETIKYDLMEVFRAFHREGR 1416
Query: 304 LDSCVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSA 363
++ + FICLI K+ ++ KD+RPISL T VYK+IAK LA RL+ V+ I+ TQSA
Sbjct: 1417 IEGSINDTFICLIPKRLNSCKVKDYRPISLITSVYKIIAKTLATRLRGVLGETISETQSA 1476
Query: 364 FIEGRQILDPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRW 423
F+EGRQILD +++ANE VE+YR KKG +LK+D EKA+DRVDW F + V+R+K F RW
Sbjct: 1477 FVEGRQILDSVLMANEAVEDYRSRGKKGIVLKIDFEKAYDRVDWGFLDLVMRKKGFGERW 1536
Query: 424 IAWILGCIKNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKN 483
WI GC+ +SIFI+ R RG+ SRG+RQ DPLSPF+F LI++VL ++ +
Sbjct: 1537 TKWIRGCVSTTSFSIFINGRVRGKFNGSRGLRQVDPLSPFLFTLIADVLGRMVDKAIDTE 1596
Query: 484 KFEGFIVGRDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG 527
GF +G+D + + LQF DDTL F K D L+ L K +E F SG
Sbjct: 1597 SLSGFQIGKDDIQLSHLQFADDTLFFVK-DEASLQKLVKIVEAFCGISG 1638
BLAST of CmUC06G116550 vs. ExPASy TrEMBL
Match:
A0A438FWU5 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_70 PE=4 SV=1)
HSP 1 Score: 377.9 bits (969), Expect = 7.1e-101
Identity = 197/521 (37.81%), Postives = 297/521 (57.01%), Query Frame = 0
Query: 6 LDRFLVSNNWEEDFEDTRVTRLVRLFSDHFPILLEAGAFDWGPSPFRFCNNWLLNHQCVG 65
LDRFL S+ W+ F + L R SDH PI LE WGP+PFRF N WLL+ +
Sbjct: 931 LDRFLFSSEWDTFFSQSFQEALPRWTSDHSPICLETNPLKWGPTPFRFENMWLLHPEFKE 990
Query: 66 IIERTLDSGNQHGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEESRAE 125
GW G + + VK +K+W + + ++K IL L + + +
Sbjct: 991 KFRVWWLECTGEGWEGHKFMRKLKFVKSKLKEWNIMTFGDLKERKKLILTDLSRIDLIEQ 1050
Query: 126 SIDLPSLELDLRSSLNAELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQFLAAKKRRN 185
+L S + R+ EL + EE QKS++ W+K GD +S+FFH+ ++ R
Sbjct: 1051 EGNLNSDLVLERTLKRRELEDVLLKEEVQWRQKSRVKWIKEGDCNSKFFHRVATGRRSRK 1110
Query: 186 LIFELLNNQGNPTKSFREIETLVIDYYKALYSKLPNAGSFPSNLDWQSVSDEQNSRLVAS 245
I L++ +G + +I +++++ LYSK +DW +S E L
Sbjct: 1111 FIKSLISERGETLNNIEDISEEIVNFFGNLYSKPVGESWRVEGIDWVPISGESGGWLDRP 1170
Query: 246 FTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNELYTNGKLDSCVKKN 305
FTE E+R+A+ + KAPG DGF + + W+ +K + +F E +TNG ++
Sbjct: 1171 FTEEEVRRAVFQLNKEKAPGPDGFTIAVYQECWDVIKEDLMRVFLEFHTNGVINQSTNAT 1230
Query: 306 FICLIKKKKDAIVTKDFRPISLTTIVYKVIAKVLAKRLKKVMPSIIAPTQSAFIEGRQIL 365
FI L+ KK ++ D+RPISL T +YK+IAKVL+ RL+KV+ I+ +Q AF+EGR IL
Sbjct: 1231 FIALVPKKSQSVKISDYRPISLVTSLYKIIAKVLSGRLRKVLHETISDSQGAFVEGRHIL 1290
Query: 366 DPIIIANEIVEEYRRNRKKGWLLKLDMEKAFDRVDWTFSEKVLREKNFDTRWIAWILGCI 425
D ++IANE+V+E RR+ ++G + K+D EKA+D VDW F + VL+ K F +W WI GC+
Sbjct: 1291 DAVLIANEVVDEKRRSGEEGIVFKIDFEKAYDHVDWGFLDHVLQRKGFSQKWRLWIRGCL 1350
Query: 426 KNPKYSIFISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVG 485
+ ++I ++ +G + ASRG+RQGDPLSPF+F L+++VLS ++ R EGF VG
Sbjct: 1351 SSSSFAILVNGNAKGWVKASRGLRQGDPLSPFLFTLVADVLSRMLFRAEETGLTEGFSVG 1410
Query: 486 RDKVHVPLLQFVDDTLIFCKYDGEMLENLRKTIELFEWCSG 527
RD+ V LLQF DDT+ F K E L+NL+ + +F SG
Sbjct: 1411 RDRTRVSLLQFADDTIFFSKASMEHLQNLKIILLVFGQVSG 1451
BLAST of CmUC06G116550 vs. TAIR 10
Match:
AT1G43760.1 (DNAse I-like superfamily protein )
HSP 1 Score: 90.5 bits (223), Expect = 4.3e-18
Identity = 93/344 (27.03%), Postives = 146/344 (42.44%), Query Frame = 0
Query: 6 LDRFLVSNNWEEDFEDTRVTRLVRLFSDHFP-ILLEAGAFDWGPSPFRFCNNWLLNHQCV 65
LDR + + +W F + SDH P I++ FR+ + L+
Sbjct: 286 LDRAIANGDWFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFS--FLSTHPT 345
Query: 66 GIIERTLDSGNQ--HGWAGFIILSNFRAVKVSMKKWQVEFIRKQQRQEKPILDMLVQEES 125
++ T+ Q G F + + +A K K + Q + K LD L +S
Sbjct: 346 FLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLESIQS 405
Query: 126 RA---ESIDLPSLELDLRSSLN---AELMSIYRTEERNLIQKSKLNWLKLGDESSRFFHQ 185
+ S L +E R N A L S YR QKS++ WL+ GD ++RFFH+
Sbjct: 406 QLLTNPSDSLFRVEHVARKKWNFFAAALESFYR-------QKSRIKWLQDGDANTRFFHK 465
Query: 186 FLAAKKRRNLIFELLNNQGNPTKSFREIETLVIDYYKALYSK-----LPNAGSFPSNLDW 245
+ A + +NLI L + ++ +++ +++ YY L P++ ++
Sbjct: 466 VILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSVQRIKDIHP 525
Query: 246 QSVSDEQNSRLVASFTEGEIRKALKDFGRNKAPGLDGFIVEFLIKFWEKLKGHFISLFNE 305
+D SRL A ++ EI A+ RNKAPG D F EF + W +K I+ E
Sbjct: 526 FRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKE 585
Query: 306 LYTNGKLDSCVKKNFICLIKKKKDAIVTKDFRPISLTTIVYKVI 336
+ G L I LI K FRP+S T+VYK+I
Sbjct: 586 FFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTVVYKII 620
BLAST of CmUC06G116550 vs. TAIR 10
Match:
AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )
HSP 1 Score: 68.2 bits (165), Expect = 2.3e-11
Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 0
Query: 339 LAKRLKKVMPSIIAPTQSAFIEGRQILDPIIIANEIVEEYRRNR-KKGW-LLKLDMEKAF 398
+ +RLK +M ++I P Q++FI GR D I+ E V RR + KGW LLKLD+EKA+
Sbjct: 1 MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60
Query: 399 DRVDWTFSEKVLREKNFDTRWI 419
DR+ W + E L F W+
Sbjct: 61 DRIRWDYLEDTLISAGFPEVWL 82
BLAST of CmUC06G116550 vs. TAIR 10
Match:
ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )
HSP 1 Score: 64.3 bits (155), Expect = 3.3e-10
Identity = 31/72 (43.06%), Postives = 44/72 (61.11%), Query Frame = 0
Query: 430 YSIF-ISRRPRGRILASRGIRQGDPLSPFIFLLISEVLSSLISRLHRKNKFEGFIVGRDK 489
Y +F I+ P+G + SRG+RQGDPLSP++F+L +EVLS L R + + G V +
Sbjct: 9 YLLFIINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNS 68
Query: 490 VHVPLLQFVDDT 501
+ L F DDT
Sbjct: 69 PRINHLLFADDT 80
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
RVW64408.1 | 1.5e-100 | 37.81 | LINE-1 retrotransposable element ORF2 protein [Vitis vinifera] | [more] |
TYJ99326.1 | 5.5e-100 | 38.97 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
RVW90400.1 | 7.2e-100 | 38.39 | Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera] | [more] |
RVW65579.1 | 1.2e-99 | 38.39 | Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera] | [more] |
KAA0039950.1 | 2.1e-99 | 38.24 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK245... | [more] |
Match Name | E-value | Identity | Description | |
P14381 | 2.8e-38 | 26.41 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... | [more] |
O00370 | 1.7e-35 | 26.46 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 | [more] |
P11369 | 2.5e-31 | 30.86 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... | [more] |
P08548 | 2.4e-29 | 26.16 | LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1 | [more] |
Q03278 | 9.7e-15 | 25.31 | Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fra... | [more] |
Match Name | E-value | Identity | Description | |
A0A803P8A0 | 2.8e-105 | 40.08 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803QEA6 | 8.9e-104 | 40.19 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803QI00 | 1.2e-103 | 38.34 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803QQM3 | 1.9e-101 | 38.56 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A438FWU5 | 7.1e-101 | 37.81 | LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF... | [more] |