CmUC06G114790 (gene) Watermelon (USVL531) v1

Overview
NameCmUC06G114790
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr06: 7651314 .. 7656278 (-)
RNA-Seq ExpressionCmUC06G114790
SyntenyCmUC06G114790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCTTCCTCATCCTTCTTTTATCTTCTTCCCCCAAATCCCCTTACTCTTCCCTTATGGCGGCCTCACACACACGAATCTCCCAAAGGCATCGAAAATTGGAAGCCCGATTCCAGAGAAGCTTCTTCCACCTCTTCTCACCACCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCAGGTTTCTAAGAAATGGCAGCATCCGGCGGCTCCTTTTCATTACGATTGCGTTTAGATTTGCAGCTTGTTTACAAAACAAGGCTTTAAGGTTACAATAAAAATGAAGAAGTTTGGTTGTTTTGAGAGAAAGATGGGGTGTGTAAGGGGGATTTGGAAAATAGAGAAAAGAGAAAAAGAAAGATAAGGAAGACCCACATCGGAAAGGGGGAAGGAGAAAGAGAGAGGGAGTTAGTATAAAAGAGTGCTGAAAGGAACTTAGAAAATTAAAAGGGTCGGTTGGCTAAATATGCCACGCTCGCCCAACATTGTGGTGAGTGCTGTATGGCAATCTAGACATATGGCCGACATAATTTCTGGAAACTAAAATAGGGTTGGCCCAATTGGCCGACCCTCCTACTCTCACTTTTCAACTTTTTTTTCATTTCTATTCCAACTTTTTTTTTTTTTAAATCTAATTTATAAAAAAAATTATTTTTATTAAAAACTAAAATTCTAATGACACAATATAATTTTGAAAAATCATTAATTAATTAGATAATTAAAAAACATTGGAATAATACTGCTTTTTATAAAGTAGATATGAACAAGAAAAAGATTTAAAATTTCAAAATTCAAAATATAGCATATATTTAGTTTCTAGCTTAAATGTGATAAGGGTCGCAAAATGTAGGATAAAATTGTTTTTTGAATTTAAATCTGAAAAGAGAAAATACAGTTATGGTGTATGTGGACATAATCTTGAGGGCATTTTGGGAATATTGAATGATGAAAACATTTTTAGGGGACGGTATCTTAATTTAAAATAAGGCATATAAATTTAAAGTATCTCAAATATGATAAAATAAAATTAAGGTAATTTGAATTTCAAAAAATAAAAAATAAGCAAAATTCAGACCCAGTTGTTGAAATATAGTTAGTTGCTATTTTTTCTAATAAAGTTTCATTTTTGCTATTATTTGAGATGAAACCTTAAATCTTACTAATTGGTATGGTAAAAATGGGTAAAAAAAAATATAGTCTTAAATTGTAGTCCACTTTAGAATTCAATACAACGCCCAATAATTGTGTCTCATCACCATCACGTGGTAGCTTTTAATGTTAATTTTGATGAAGTGAGCTTAAAAGATGGTTCAAACTTCAAAAACCATGGCCTAATCGGATAAGCAATAAAATTGGTAATCTCAATTATCTTTATATATATTGTTTCATTAACGAATTAAAAAGTCACGTAAATGTATGTTGCTAAACAAATAAAAACTCAGCCCACTCTTTTCGAAAATTCATTTCCTTTTAGTGCTAATTACATTGAGAAACCAATAATTTTATGACATCTTAAAAAAAAAAAATTAAGTTAAATTTATTCATTAAATTTTAAGTCTATGTTGAATTTTTAAAAAATGCCTAATAAAATTTTAATTTCTTTGTTTATGTACCATAAGTCCTAAATTTAAAATGGATGTAGTTAGTAATTAAACTTTTCAATTTTGTGTCTAATAGATTCTTGATCTATTTAACATTTTTTTTAAAGGTACACACCTACTAGATGCAAAATTGAAAATTTGAGGTTTCATTAGACATAAAATTAACTTCTACACTTAATTAATCAACTAATTTAAAAGACATAAAATTAACTTCTACACTTAATTAATCAACTAATTTAAAAACCAAAAAGAGCATAGCTCAACTAGCAACCACAAAGTTTGTAGTTCAAATCGTCCGAAATCTAAGTTAAGTTTGTATTTGACATTATTTAATTATTTATGGTTTTTATGATTATGACTCTAGGGTTTAGAGAAGTGTTCTATATAAATTCTTTAAACCTAAAGGCACCAATTGGTTTTGTAATTTGTAGCCTTCTCTCTAATAAAATTAATATCTCTTTGTCTCATAGACATATTTAACACACTGTTAGTAACCCACATAGATCTGCGTGTTGATTCTCTATTCTTTTACGTTTTCTATATTCCTTAATTGTCTATTTTGTAGTAATAATAGTGTTAAAAAAAAAATTCTAAGAAATGTATATTTTAAACAAACTTACTCATAATTTGAAAGTTCAAATTAGTCTATTTTAAATTAAAAGGTAAATTTGATAAAATTTGAATTTCATCGATTTGAATTTGAATCAATTTTCATACTCTATTCTAACAATTACTTTTATTAAATTTGGACATATACGCCACCTATATCCTAAATATGTTAAAGAAATGTAAAAACCAAATTTAAATTATCTAGAGTTGATCTCGAATTAATAGCATTTGTTGCATTCATTAATTCCATATCAAATTTGAGTGGAAGTAAAAATTAAAAGATATAGCAAATAATGCAATATATATATATATTAAAAATATTTCACACGTACTTCATAACTCTAAATTAAACAATTTTACATTCCAAACAAACATAGACTTTTTAAATACTCTCCAAACTTCATAAACTTAATGTCCCAAATGTTTCCTTAAAAATTAGGGACCATATAGAATATTTTACTTTAATTTCATTTTCTTCTCAAATTTATTCTTGACATGTGACATTGCGATCAAATAAACATCCACCATTCACGTTTAATCTTATCTCTACTTTTTCAAAGGTTCACCTTTGACCACGTACTTTAAAATTTAACGTCATACCGCCGCAACGTTGTTACGGACCAATCAAGTTGATGCCACATCGGATTCCTACTTGTCACTGTCATACTCTCATGCAACCCTTGTCTGCCACGTGTACAATCTGTCTCCTATGGCATCAAATCTCATGGCAATTATTATTTGAGATAAATTAGTGGAGCTGGATTAACTCTAATTTAGAAAAGGAAAAAGAACAGGAGAATATTGAGTAAATTTTTTTCTTAAAAAAATAATAATAATAATAATAAAAAAAATTAAAAACAGGGGGAGGTTTGAATTTTAGAATGGGGGTTTGGAATTTTCATTAACCTTTTCAACCATAAAATAAAATTGGTCAAAAGCAAAGATTGGAATCCCCTTGTATTTTATATTTGCACCACATTTTATTCCTTTTAAATCAAATACCAACCATACCAAAACAATAACATCAAGTTAAGAATATCTACATGTTTCTAGATTTTTCCACTCTCATCAACACATCCACATGGGATTTTTATTTCAAATTTTTCATTCTCTCAAGGATTTTTTTTTCTTTCTAGAAGAGTTCAATTTTTAAAATTAAGTTGGATTTTAAATTCAATATTATGTGGGTGGTAAGATTTTCAATTTAAAAATTAGACATTTTAAAATTTTGAATCCAAAATTGTTACACACTTTTTATTGTTTGTTGAGGAACTTATTAGACACACAATTAAAACTTTAATGACACATTAGACATTTTTTAAACTTTAATGACCCATCAAACCTACAATTTTTGGAAATAAATTTATATAATTTTGCTATATCTTCTCTCTAAACTCAATAAATAAAGCCAAAATTACAAGTTTAGTCTTTAAACTCTTAAGTTCGTGGCAATTTGTATATTTAGTCAATGAACCTTAAACTTAGACGCTAAATTACAAGTTTTGTCAAAATTATATTCAATATATCAATTATTCTTTAAAAAACTTAAATATAATAAGAATTTATTAGACACAAAATTAAGAGCTTAGCGGCCTAGTTACTTTTTTATATTCTAAGAGCCTTACACAAACTTCAAAGTTAAAAGACCATATCGGTAATTTAACAAAAAAATAAAATAAAAATAAGGTGTTTAATTTTGGTTTTTTGGTTTTGTGGTTGGTCTTACTAGTTGGAATAATATTTGGGTACATCTTAGGATTAGGGGTGTGCAAGGTTCGGTTCGGTCCGGTTTTGGGCCGAACCATGAACCAAACTGAAGTTATTGGTTCACAATGAAGAAGAACCGCTGAAAATCGGTTACACTGGTTCGTTCAAGTGGTTCAGTTAAACACGAGTGCGAGAGCGAGAGAGAGAGTCTTGCTCTTGCTTCCTTTCCTCACTCACAATTACTCTTCTCTCTCTCACACAATCACTCTTATCTCTCAGACTGGTTGAGTTCGATTTTGTATAATTTTTTAGGATAATAAACCAATAACCAAATTGAATGGTTCAGTTTTGGTTTTCCGTGAATCGGTAGTTCTCCATTTTTCAAAAAAATAGACCCATTCATTATTCGTTAAATATTAAGTAGGACGACAAGTAGTATTGGAAGCTCCATTCATTATTTGTTAAAAAGAAATGATATGAGATCTATAAATTAAAATAATATATGATTAAGTGACGTGTAAAATGGTAAATGTTGGTAAATATATTATGGGGGCGTGTGACAACTATGGGCCAGTTATTGGAGGCCCCAACTAGAGGTGAGCACTAAAAATAGTGCTTCCCACATGCCTCCTTTTGTCCCCTATAATTACCCCTTTCCCTCTTCCTCATCCTTCTTATCTTCTTCCCTCAAATCCCCTTTCTCTTCCCTTATGGCCGACTCACACAGACGAACCTCCGCCCCCGTAAGCCGCCATCCTCAGCAGCCAAGCCGCCTTCAACGCCGCGCTCCGGCGTCCCTGCAAATCAATCGCTCCGATTGGAAGGTCGCCATCCCTCTCTTGTCCCCCCTCGTCTCTCCTTCCTCTCCCAAAGACATCCAAAATTGGAAGCCCGATTCCAGAGAAGCTTCTTCCACCTCTTCTCACCACCATCATCATAAAGAATCGGAGCCAGAGAAGCCGCCGGTTTTTAAGAAATGGCAGCATCCGGCAGCTCCTTTTCATTACGATTCCGGTCCTAGGGCTCCCAGATTCGTACCCGTTTAG

mRNA sequence

ATGGCCTCTTCCTCATCCTTCTTTTATCTTCTTCCCCCAAATCCCCTTACTCTTCCCTTATGGCGGCCTCACACACACGAATCTCCCAAAGGCATCGAAAATTGGAAGCCCGATTCCAGAGAAGCTTCTTCCACCTCTTCTCACCACCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCAGGTTTCTAAGAAATGGCAGCATCCGGCGGCTCCTTTTCATTACGATTGCCAGCCAAGCCGCCTTCAACGCCGCGCTCCGGCGTCCCTGCAAATCAATCGCTCCGATTGGAAGGTCGCCATCCCTCTCTTGTCCCCCCTCGTCTCTCCTTCCTCTCCCAAAGACATCCAAAATTGGAAGCCCGATTCCAGAGAAGCTTCTTCCACCTCTTCTCACCACCATCATCATAAAGAATCGGAGCCAGAGAAGCCGCCGGTTTTTAAGAAATGGCAGCATCCGGCAGCTCCTTTTCATTACGATTCCGGTCCTAGGGCTCCCAGATTCGTACCCGTTTAG

Coding sequence (CDS)

ATGGCCTCTTCCTCATCCTTCTTTTATCTTCTTCCCCCAAATCCCCTTACTCTTCCCTTATGGCGGCCTCACACACACGAATCTCCCAAAGGCATCGAAAATTGGAAGCCCGATTCCAGAGAAGCTTCTTCCACCTCTTCTCACCACCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCAGGTTTCTAAGAAATGGCAGCATCCGGCGGCTCCTTTTCATTACGATTGCCAGCCAAGCCGCCTTCAACGCCGCGCTCCGGCGTCCCTGCAAATCAATCGCTCCGATTGGAAGGTCGCCATCCCTCTCTTGTCCCCCCTCGTCTCTCCTTCCTCTCCCAAAGACATCCAAAATTGGAAGCCCGATTCCAGAGAAGCTTCTTCCACCTCTTCTCACCACCATCATCATAAAGAATCGGAGCCAGAGAAGCCGCCGGTTTTTAAGAAATGGCAGCATCCGGCAGCTCCTTTTCATTACGATTCCGGTCCTAGGGCTCCCAGATTCGTACCCGTTTAG

Protein sequence

MASSSSFFYLLPPNPLTLPLWRPHTHESPKGIENWKPDSREASSTSSHHHHHKESEPEKPQVSKKWQHPAAPFHYDCQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWKPDSREASSTSSHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV
Homology
[Close]
BLAST of CmUC06G114790 vs. NCBI nr
Match: XP_038875425.1 (uncharacterized protein At4g14450, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 189.1 bits (479), Expect = 3.1e-44
Identity = 91/94 (96.81%), Postives = 92/94 (97.87%), Query Frame = 0 

Query: 78  QPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWKPDSREASSTSSHHHHHK 137
           QPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNW PDSREASS+SS HHHHK
Sbjct: 18  QPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSSSSQHHHHK 77

Query: 138 ESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV 172
           ESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV
Sbjct: 78  ESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV 111

[Close]
BLAST of CmUC06G114790 vs. NCBI nr
Match: XP_008460625.2 (PREDICTED: uncharacterized protein At4g14450, chloroplastic-like [Cucumis melo])

HSP 1 Score: 169.5 bits (428), Expect = 2.6e-38
Identity = 89/110 (80.91%), Postives = 90/110 (81.82%), Query Frame = 0 

Query: 78  QPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWKPDSREA------SSTSS 137
           QPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNW PDSREA      SS+SS
Sbjct: 18  QPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSS 77

Query: 138 HHH----------HHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV 172
           HHH          HHKE E EK PVFKKWQHPAAPFHYDSGPRAPRFVPV
Sbjct: 78  HHHHHHHQHHQHQHHKEPEAEKAPVFKKWQHPAAPFHYDSGPRAPRFVPV 127

[Close]
BLAST of CmUC06G114790 vs. NCBI nr
Match: XP_022930471.1 (uncharacterized protein At4g14450, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 164.1 bits (414), Expect = 1.1e-36
Identity = 84/97 (86.60%), Postives = 87/97 (89.69%), Query Frame = 0 

Query: 78  QPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWKPDSREASSTSS--HHHH 137
           QPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNW  DS   SS+SS  HHHH
Sbjct: 17  QPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHH 76

Query: 138 HKESEPEKPPVFKKWQHPAAPFHYDSGPRAPR-FVPV 172
           HKESEPEKPPVFKKWQHPAAPFHYDSG RAPR FVPV
Sbjct: 77  HKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVPV 113

[Close]
BLAST of CmUC06G114790 vs. NCBI nr
Match: XP_023000559.1 (uncharacterized protein At4g14450, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 163.3 bits (412), Expect = 1.8e-36
Identity = 84/99 (84.85%), Postives = 87/99 (87.88%), Query Frame = 0 

Query: 78  QPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWKPDSREASSTSS----HH 137
           QPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNW  DS   SS+SS    HH
Sbjct: 17  QPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHH 76

Query: 138 HHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPR-FVPV 172
           HHHKESEPEKPPVFKKWQHPAAPFHYDSG RAPR FVPV
Sbjct: 77  HHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVPV 115

[Close]
BLAST of CmUC06G114790 vs. NCBI nr
Match: KAG6593848.1 (putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026180.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 162.9 bits (411), Expect = 2.4e-36
Identity = 84/100 (84.00%), Postives = 87/100 (87.00%), Query Frame = 0 

Query: 78  QPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWKPDSREASSTSS-----H 137
           QPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNW  DS   SS+SS     H
Sbjct: 17  QPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHH 76

Query: 138 HHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPR-FVPV 172
           HHHHKESEPEKPPVFKKWQHPAAPFHYDSG RAPR FVPV
Sbjct: 77  HHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVPV 116

[Close]
BLAST of CmUC06G114790 vs. ExPASy Swiss-Prot
Match: Q6NN02 (Uncharacterized protein At4g14450, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g14450 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.3e-08
Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 0 

Query: 78  QPSRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSPKDIQNWKPDSREASSTSSHHHH 137
           Q S+LQRRAP+ +    + S+W VAIPLLSPL    +    Q+  P  +  +        
Sbjct: 36  QLSQLQRRAPSLMIKPTSFSNWNVAIPLLSPLAPSLTSSFDQSHVPPPQNKTEIP----- 95

Query: 138 HKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV 172
             E E +K PVFKKWQHPA+PF Y+     P F+ V
Sbjct: 96  -VEEEVKKTPVFKKWQHPASPFCYEPTTFVPPFIQV 125

[Close]
BLAST of CmUC06G114790 vs. ExPASy TrEMBL
Match: A0A1S3CDB1 (uncharacterized protein At4g14450, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103499403 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.2e-38
Identity = 89/110 (80.91%), Postives = 90/110 (81.82%), Query Frame = 0 

Query: 78  QPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWKPDSREA------SSTSS 137
           QPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNW PDSREA      SS+SS
Sbjct: 18  QPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSASSSSSSSS 77

Query: 138 HHH----------HHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV 172
           HHH          HHKE E EK PVFKKWQHPAAPFHYDSGPRAPRFVPV
Sbjct: 78  HHHHHHHQHHQHQHHKEPEAEKAPVFKKWQHPAAPFHYDSGPRAPRFVPV 127

[Close]
BLAST of CmUC06G114790 vs. ExPASy TrEMBL
Match: A0A6J1ER11 (uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111436912 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 5.2e-37
Identity = 84/97 (86.60%), Postives = 87/97 (89.69%), Query Frame = 0 

Query: 78  QPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWKPDSREASSTSS--HHHH 137
           QPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNW  DS   SS+SS  HHHH
Sbjct: 17  QPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHH 76

Query: 138 HKESEPEKPPVFKKWQHPAAPFHYDSGPRAPR-FVPV 172
           HKESEPEKPPVFKKWQHPAAPFHYDSG RAPR FVPV
Sbjct: 77  HKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVPV 113

[Close]
BLAST of CmUC06G114790 vs. ExPASy TrEMBL
Match: A0A6J1KKB8 (uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111494801 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 8.9e-37
Identity = 84/99 (84.85%), Postives = 87/99 (87.88%), Query Frame = 0 

Query: 78  QPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWKPDSREASSTSS----HH 137
           QPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNW  DS   SS+SS    HH
Sbjct: 17  QPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHH 76

Query: 138 HHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPR-FVPV 172
           HHHKESEPEKPPVFKKWQHPAAPFHYDSG RAPR FVPV
Sbjct: 77  HHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVPV 115

[Close]
BLAST of CmUC06G114790 vs. ExPASy TrEMBL
Match: A0A0A0LLJ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G190740 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.3e-35
Identity = 84/105 (80.00%), Postives = 88/105 (83.81%), Query Frame = 0 

Query: 79  PSRLQRRAPASLQINRSDWKVAIPLLSPLVSP-SSPKDIQNWK-PDSREASSTSS----- 138
           PSRLQRRAPASLQINRSDWKVAIPLLSPLVSP SSPKDI +W  PDSR+ SST+S     
Sbjct: 14  PSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSSHH 73

Query: 139 -----HHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV 172
                HHHHHKES+PEK PVFKKWQHPAAPFHYDSG RAPRFVPV
Sbjct: 74  HHLLHHHHHHKESDPEKAPVFKKWQHPAAPFHYDSGARAPRFVPV 118

[Close]
BLAST of CmUC06G114790 vs. ExPASy TrEMBL
Match: A0A6J1H320 (uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111459957 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.2e-30
Identity = 71/93 (76.34%), Postives = 77/93 (82.80%), Query Frame = 0 

Query: 78  QPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWKPDSREASSTSSHHHHHK 137
           QP   + RAPASLQINR DWKVAIPLL+PLVSPSSPK+IQ W P+S E SS SS   +HK
Sbjct: 60  QPGCFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWAPNSGEGSSNSS---NHK 119

Query: 138 ESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVP 171
           ESEPEKPPVFKKWQHPAAPF YDSGP  PRF+P
Sbjct: 120 ESEPEKPPVFKKWQHPAAPFQYDSGPMDPRFIP 149

[Close]
BLAST of CmUC06G114790 vs. TAIR 10
Match: AT1G04330.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 71.2 bits (173), Expect = 8.8e-13
Identity = 45/86 (52.33%), Postives = 50/86 (58.14%), Query Frame = 0 

Query: 80  SRLQRRAPASLQIN--RSDWKVAIPLLSPLVSPSSPKDIQNWKPDSREASSTSSHHHHHK 139
           SRLQRRAP  L+IN   ++WKVAIPLLSP  SP          P    A          K
Sbjct: 17  SRLQRRAPPPLKINPCEANWKVAIPLLSPTESP----------PQKPPAVMKREEQRWGK 76

Query: 140 ESEPEKPPVFKKWQHPAAPFHYDSGP 164
           E+  EKPPVFKKWQHPAAPF+Y   P
Sbjct: 77  EA--EKPPVFKKWQHPAAPFYYQPAP 90

[Close]
BLAST of CmUC06G114790 vs. TAIR 10
Match: AT3G23170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14450.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-11
Identity = 48/100 (48.00%), Postives = 58/100 (58.00%), Query Frame = 0 

Query: 78  QPSRLQRRAPASLQI----NRSDWKVAIPLLSPL-VSP-SSPKDIQNWKPDSREASSTSS 137
           QPSRL +R PA   +      ++W  AIPLLSPL +SP SSP D    +P   +  ST+ 
Sbjct: 20  QPSRLLKRPPALKIVPATPAANNWNTAIPLLSPLALSPESSPVD----QPPVEKNQSTA- 79

Query: 138 HHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV 172
                     EK PVFKKWQHPAAPF+Y+S    P FVPV
Sbjct: 80  -------VAVEKTPVFKKWQHPAAPFYYESSTFVPPFVPV 107

[Close]
BLAST of CmUC06G114790 vs. TAIR 10
Match: AT4G14450.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 9.1e-10
Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 0 

Query: 78  QPSRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSPKDIQNWKPDSREASSTSSHHHH 137
           Q S+LQRRAP+ +    + S+W VAIPLLSPL    +    Q+  P  +  +        
Sbjct: 36  QLSQLQRRAPSLMIKPTSFSNWNVAIPLLSPLAPSLTSSFDQSHVPPPQNKTEIP----- 95

Query: 138 HKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV 172
             E E +K PVFKKWQHPA+PF Y+     P F+ V
Sbjct: 96  -VEEEVKKTPVFKKWQHPASPFCYEPTTFVPPFIQV 125

The following BLAST results are available for this feature:
BLAST of CmUC06G114790 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038875425.13.1e-4496.81uncharacterized protein At4g14450, chloroplastic-like [Benincasa hispida][more]
XP_008460625.22.6e-3880.91PREDICTED: uncharacterized protein At4g14450, chloroplastic-like [Cucumis melo][more]
XP_022930471.11.1e-3686.60uncharacterized protein At4g14450, chloroplastic-like [Cucurbita moschata][more]
XP_023000559.11.8e-3684.85uncharacterized protein At4g14450, chloroplastic-like [Cucurbita maxima][more]
KAG6593848.12.4e-3684.00putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]... [more]
BLAST of CmUC06G114790 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6NN021.3e-0841.67Uncharacterized protein At4g14450, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
BLAST of CmUC06G114790 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CDB11.2e-3880.91uncharacterized protein At4g14450, chloroplastic-like OS=Cucumis melo OX=3656 GN... [more]
A0A6J1ER115.2e-3786.60uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita moschata OX=3... [more]
A0A6J1KKB88.9e-3784.85uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita maxima OX=366... [more]
A0A0A0LLJ81.3e-3580.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G190740 PE=4 SV=1[more]
A0A6J1H3201.2e-3076.34uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita moschata OX=3... [more]
BLAST of CmUC06G114790 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G04330.18.8e-1352.33unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G23170.11.7e-1148.00unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G14450.19.1e-1041.67unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..147
NoneNo IPR availablePANTHERPTHR33912:SF2PUTATIVE-RELATEDcoord: 19..78
coord: 78..170
IPR040381Uncharacterized protein At4g14450-likePANTHERPTHR33912OS01G0939400 PROTEINcoord: 78..170
IPR040381Uncharacterized protein At4g14450-likePANTHERPTHR33912OS01G0939400 PROTEINcoord: 19..78

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC06G114790.1CmUC06G114790.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus