CmUC06G114690 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G114690
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	40S ribosomal protein S15
Location	CmU531Chr06: 7524604 .. 7526718 (-)
RNA-Seq Expression	CmUC06G114690
Synteny	CmUC06G114690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTAGGGTTTCGGCCATTGGAGTTGCTGATTGTAACCAATATATATATATCGCTGAAAAACGAAGGCAAAAAACCTTGCAGATTCTGAAGCATCCTAGCGCCGATTAGGTTTCCACCTTCTCATCCCGGAGATCCGAAGACGTTAACCATGGTAGGTTTTCAACCCTTTCTTCTCTTCGATTTATCGTTCCTCACTTCCAGTTTCTTTAATGGTGCTGCCTCGGCCTCCTTCAGGCGGATGTGGAAGCCGATGTTCCAGTGGCTGGACAACAGCCAAAGAAGAGGACCTTCAAGAAGTTTAGCTTCCGTGGTGTCGATTTGGATGCTTTGCTCGACATGTCCACCGATGAGCTCGTCAAGCTCTTCACTGCCCGTGCACGCAGAAGGTTGTTACAACTGAATGTGTACTGAATTGGTTTTGAGTTGTCCTTTTTTGTTTACATTCTTTTCTATGATTTTGGTATAGGTTTCGTAGGGGTTTGACAAGGAAGCCAATGGCCCTTATCAAGAAGCTCCGCAAAGCGGTAAGCATCTTTTAAATCCTTTTCTGTTAAATCAATGTGGGAATGATTTTACAACTTTGTACTGTTTTTTGATTCTAGCTGGTGATGCTGTTATCTTAATCTTGGCATGGTTTAGATTAAGTTTTTCTTCGGTGTTTTTGATGAGTGGTGCAAAGAAAATTTATATAATTAGGGCATGATATCTTCGATGTATAGTTCTATTAGATGAGATTTCCAAGAATTAGTTTATACTATAAATTCAATCCTTTTTATTGGCTGATATGAACTTCTATACTCAAGCCTCACTTCAATTTGCTTTAGTCTTTAAGTGAACATCAATAAACTGAAATTTTGGGAATTTCCATTTACATGAGCCTTTGCCCTGAATCTTTGAATATAGACTCGTGCTCTCATACTTGTGTATTAAAAGCCTCGAAGTTATTCTAGGAAATTACATGCCATTGGATTACCTTAAGGTTAATAATATAATCAGCTGTTTGGTATCAGTTTCAAAACAAATGTATGGACTGCATCTTTATTTCTCTGAGAACAGCTCTGCTGTTGTCCTTATTTCTTGTGGTCTTCATTATTAACTTGGGTGTAACCTTGAAGCTAACATGTTCACCAACTTACGTTGCAAAATGGTATCCATCGTTTCTGCTATTGGATTTTTCATAATCTGACCTCGGAACTTACCCAGTGGTTGACTTGTTAGTTAGAGTACTATGAGTCTTTGAATCTGGTTAGTATTCTATTGTGTTAGTTCTTGCATTTTCCTTGTTTTTCCTATTGGATTTCTCATATTCTATCATGAGAACTGAAGATCATCCCCCAGTGGTAGATTCAGAATTTAATGTGCCTTTAACATCCGAACTTCATCATTATGCTTCTAACATGGAACTTAAAATCATCGGCCAGTTATGTTGATTGTGAAGTGAATGTACTGTGAATCTCTGAAATTCATCAATATACCCATTGATATTTACTTTTTCCTTTTTTTCAACTTGTTTTTGATAAGTTTTCCACCCTGTTTAAGTTTTGTGCATTTGTCTTCCCTTCTGGACACCTCTTGTTCCTACCTCATAACCGATCAGTTTAGTTATTCTCTTATTTCTCATCTCATTCCTTTTTATCCCTTGTATAGAAAAGGGAAGCACCTCCTGGCGAGAAGCCAGAGCCCGTCCGAACTCACCTTCGGAATATGATCATCGTGCCAGAGATGATTGGAAGCATTATTGGTGTTTACAACGGGAAGACCTTCAACCAAGTTGAAATCAAGCCAGAGATGATAGGCCATTACCTAGCAGAGTTCTCCATTTCATACAAGCCTGTGAAGCATGGAAGGCCCGGTATTGGTGCCACCCACTCTTCAAGGTTCATTCCTCTCAAGTGAAAATCAGAGTCAACTTCTTGCTTTCTTAGTTTTGTTATATTGTTACAAGAAACATGGATGTCGATCAGATTTTGTTCTTAGTTTTTTCCCATTTTTCTATGCTTGATATCTGATTAGTACGATGGAGGCTGGAGCTATTTAGTTTTTGGAATCTTGTGTTACTGTTCAAATTTTTATTCTACTTGTTTCAACTAAATGTAGACTTGGCTGCTTCGTAAT

mRNA sequence

CCTAGGGTTTCGGCCATTGGAGTTGCTGATTGTAACCAATATATATATATCGCTGAAAAACGAAGGCAAAAAACCTTGCAGATTCTGAAGCATCCTAGCGCCGATTAGGTTTCCACCTTCTCATCCCGGAGATCCGAAGACGTTAACCATGGCGGATGTGGAAGCCGATGTTCCAGTGGCTGGACAACAGCCAAAGAAGAGGACCTTCAAGAAGTTTAGCTTCCGTGGTGTCGATTTGGATGCTTTGCTCGACATGTCCACCGATGAGCTCGTCAAGCTCTTCACTGCCCGTGCACGCAGAAGGTTTCGTAGGGGTTTGACAAGGAAGCCAATGGCCCTTATCAAGAAGCTCCGCAAAGCGAAAAGGGAAGCACCTCCTGGCGAGAAGCCAGAGCCCGTCCGAACTCACCTTCGGAATATGATCATCGTGCCAGAGATGATTGGAAGCATTATTGGTGTTTACAACGGGAAGACCTTCAACCAAGTTGAAATCAAGCCAGAGATGATAGGCCATTACCTAGCAGAGTTCTCCATTTCATACAAGCCTGTGAAGCATGGAAGGCCCGGTATTGGTGCCACCCACTCTTCAAGGTTCATTCCTCTCAAGTGAAAATCAGAGTCAACTTCTTGCTTTCTTAGTTTTGTTATATTGTTACAAGAAACATGGATGTCGATCAGATTTTGTTCTTAGTTTTTTCCCATTTTTCTATGCTTGATATCTGATTAGTACGATGGAGGCTGGAGCTATTTAGTTTTTGGAATCTTGTGTTACTGTTCAAATTTTTATTCTACTTGTTTCAACTAAATGTAGACTTGGCTGCTTCGTAAT

Coding sequence (CDS)

ATGGCGGATGTGGAAGCCGATGTTCCAGTGGCTGGACAACAGCCAAAGAAGAGGACCTTCAAGAAGTTTAGCTTCCGTGGTGTCGATTTGGATGCTTTGCTCGACATGTCCACCGATGAGCTCGTCAAGCTCTTCACTGCCCGTGCACGCAGAAGGTTTCGTAGGGGTTTGACAAGGAAGCCAATGGCCCTTATCAAGAAGCTCCGCAAAGCGAAAAGGGAAGCACCTCCTGGCGAGAAGCCAGAGCCCGTCCGAACTCACCTTCGGAATATGATCATCGTGCCAGAGATGATTGGAAGCATTATTGGTGTTTACAACGGGAAGACCTTCAACCAAGTTGAAATCAAGCCAGAGATGATAGGCCATTACCTAGCAGAGTTCTCCATTTCATACAAGCCTGTGAAGCATGGAAGGCCCGGTATTGGTGCCACCCACTCTTCAAGGTTCATTCCTCTCAAGTGA

Protein sequence

MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK

Homology

[Close]

BLAST of CmUC06G114690 vs. NCBI nr
Match: XP_004150403.1 (40S ribosomal protein S15-4 [Cucumis sativus] >XP_008465194.1 PREDICTED: 40S ribosomal protein S15-4-like [Cucumis melo] >XP_038906517.1 40S ribosomal protein S15-4-like [Benincasa hispida] >KGN61627.1 hypothetical protein Csa_006637 [Cucumis sativus])

HSP 1 Score: 306.2 bits (783), Expect = 1.6e-79
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60
           MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK
Sbjct: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI
Sbjct: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
           GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153

[Close]

BLAST of CmUC06G114690 vs. NCBI nr
Match: KAA0057520.1 (40S ribosomal protein S15-4 [Cucumis melo var. makuwa])

HSP 1 Score: 306.2 bits (783), Expect = 1.6e-79
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60
           MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK
Sbjct: 47  MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 106

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI
Sbjct: 107 PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 166

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
           GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 167 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 199

[Close]

BLAST of CmUC06G114690 vs. NCBI nr
Match: TYK08201.1 (40S ribosomal protein S15-4 [Cucumis melo var. makuwa])

HSP 1 Score: 306.2 bits (783), Expect = 1.6e-79
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60
           MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK
Sbjct: 388 MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 447

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI
Sbjct: 448 PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 507

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
           GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 508 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 540

[Close]

BLAST of CmUC06G114690 vs. NCBI nr
Match: XP_022930318.1 (40S ribosomal protein S15-4 [Cucurbita moschata] >XP_023000557.1 40S ribosomal protein S15-4 [Cucurbita maxima] >XP_023513952.1 40S ribosomal protein S15-4 [Cucurbita pepo subsp. pepo] >KAG6593857.1 40S ribosomal protein S15, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026189.1 40S ribosomal protein S15 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 296.6 bits (758), Expect = 1.2e-76
Identity = 151/153 (98.69%), Postives = 151/153 (98.69%), Query Frame = 0


Query: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60
           MADVEADV VAG QPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK
Sbjct: 1   MADVEADVAVAG-QPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI
Sbjct: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
           GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152

[Close]

BLAST of CmUC06G114690 vs. NCBI nr
Match: XP_022958790.1 (40S ribosomal protein S15-4-like [Cucurbita moschata] >XP_023006761.1 40S ribosomal protein S15-4-like [Cucurbita maxima] >XP_023548520.1 40S ribosomal protein S15-4-like [Cucurbita pepo subsp. pepo] >KAG6574934.1 40S ribosomal protein S15, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013502.1 40S ribosomal protein S15, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 295.4 bits (755), Expect = 2.8e-76
Identity = 150/153 (98.04%), Postives = 151/153 (98.69%), Query Frame = 0


Query: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60
           MADVEADV VAG QPKKRTFKKFSFRGVDLD+LLDMSTDELVKLFTARARRRFRRGLTRK
Sbjct: 1   MADVEADVAVAG-QPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRK 60

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI
Sbjct: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
           GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152

[Close]

BLAST of CmUC06G114690 vs. ExPASy Swiss-Prot
Match: Q945U1 (40S ribosomal protein S15 OS=Elaeis oleifera OX=80265 GN=RPS15 PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 4.6e-74
Identity = 139/153 (90.85%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60
           MADV   V V G QPKKRTF+KFS+RGVDLD LLDM TDELVKLF ARARRRF+RGL RK
Sbjct: 1   MADVSDAVDVGGAQPKKRTFRKFSYRGVDLDQLLDMGTDELVKLFHARARRRFQRGLKRK 60

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRKAKR+APPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI
Sbjct: 61  PMALIKKLRKAKRDAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
           GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153

[Close]

BLAST of CmUC06G114690 vs. ExPASy Swiss-Prot
Match: Q08112 (40S ribosomal protein S15-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15A PE=2 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 5.1e-73
Identity = 138/153 (90.20%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60
           MADVE +V  AG  PKKRTFKKF+F+GVDLDALLDMSTD+LVKLF++R RRRF RGLTRK
Sbjct: 1   MADVEPEVAAAG-VPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRK 60

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI
Sbjct: 61  PMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
           GHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct: 121 GHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152

[Close]

BLAST of CmUC06G114690 vs. ExPASy Swiss-Prot
Match: Q9FY64 (40S ribosomal protein S15-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15D PE=2 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 5.1e-73
Identity = 138/153 (90.20%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60
           MADVE +V  AG  PKKRTFKKF+F+GVDLDALLDMSTD+LVKLF++R RRRF RGLTRK
Sbjct: 1   MADVEPEVAAAG-VPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRK 60

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI
Sbjct: 61  PMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
           GHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct: 121 GHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152

[Close]

BLAST of CmUC06G114690 vs. ExPASy Swiss-Prot
Match: P31674 (40S ribosomal protein S15 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS15 PE=2 SV=2)

HSP 1 Score: 273.5 bits (698), Expect = 1.5e-72
Identity = 136/154 (88.31%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MADVEADVPV-AGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTR 60
           MADVE +  V AG QPKKRTF+K+S+RGVDLDALLDMSTD+LV+LF ARARRRF+RGL R
Sbjct: 1   MADVEVETEVAAGAQPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKR 60

Query: 61  KPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEM 120
           KPMALIKKLRKAK++AP GEKPEPVRTHLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEM
Sbjct: 61  KPMALIKKLRKAKKDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEM 120

Query: 121 IGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
           IGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 IGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154

[Close]

BLAST of CmUC06G114690 vs. ExPASy Swiss-Prot
Match: O65059 (40S ribosomal protein S15 OS=Picea mariana OX=3335 GN=RPS15 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 9.6e-72
Identity = 135/149 (90.60%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 5   EADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKPMAL 64
           +ADV V   QPKKRTFKKFS+RGVDLDALLDM+++ELVKLF ARARRRF+RGL R+PMAL
Sbjct: 3   DADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARARRRFQRGLKRQPMAL 62

Query: 65  IKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL 124
           IKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL
Sbjct: 63  IKKLRKAKREAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL 122

Query: 125 AEFSISYKPVKHGRPGIGATHSSRFIPLK 154
           AEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 123 AEFSISYKPVKHGRPGIGATHSSRFIPLK 151

[Close]

BLAST of CmUC06G114690 vs. ExPASy TrEMBL
Match: A0A5A7UQZ4 (40S ribosomal protein S15-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G004100 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 7.6e-80
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60
           MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK
Sbjct: 47  MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 106

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI
Sbjct: 107 PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 166

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
           GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 167 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 199

[Close]

BLAST of CmUC06G114690 vs. ExPASy TrEMBL
Match: A0A5D3C8N2 (40S ribosomal protein S15-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00170 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 7.6e-80
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60
           MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK
Sbjct: 388 MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 447

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI
Sbjct: 448 PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 507

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
           GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 508 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 540

[Close]

BLAST of CmUC06G114690 vs. ExPASy TrEMBL
Match: A0A0A0LLK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G193310 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 7.6e-80
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60
           MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK
Sbjct: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI
Sbjct: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
           GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153

[Close]

BLAST of CmUC06G114690 vs. ExPASy TrEMBL
Match: A0A1S3CNC4 (40S ribosomal protein S15-4-like OS=Cucumis melo OX=3656 GN=LOC103502858 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 7.6e-80
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60
           MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK
Sbjct: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI
Sbjct: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
           GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153

[Close]

BLAST of CmUC06G114690 vs. ExPASy TrEMBL
Match: A0A6J1KDZ2 (40S ribosomal protein S15-4 OS=Cucurbita maxima OX=3661 GN=LOC111494798 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 6.0e-77
Identity = 151/153 (98.69%), Postives = 151/153 (98.69%), Query Frame = 0


Query: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60
           MADVEADV VAG QPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK
Sbjct: 1   MADVEADVAVAG-QPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI
Sbjct: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
           GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152

[Close]

BLAST of CmUC06G114690 vs. TAIR 10
Match: AT1G04270.1 (cytosolic ribosomal protein S15 )

HSP 1 Score: 275.0 bits (702), Expect = 3.6e-74
Identity = 138/153 (90.20%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60
           MADVE +V  AG  PKKRTFKKF+F+GVDLDALLDMSTD+LVKLF++R RRRF RGLTRK
Sbjct: 1   MADVEPEVAAAG-VPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRK 60

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI
Sbjct: 61  PMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
           GHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct: 121 GHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152

[Close]

BLAST of CmUC06G114690 vs. TAIR 10
Match: AT5G09510.1 (Ribosomal protein S19 family protein )

HSP 1 Score: 275.0 bits (702), Expect = 3.6e-74
Identity = 138/153 (90.20%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60
           MADVE +V  AG  PKKRTFKKF+F+GVDLDALLDMSTD+LVKLF++R RRRF RGLTRK
Sbjct: 1   MADVEPEVAAAG-VPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRK 60

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI
Sbjct: 61  PMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
           GHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct: 121 GHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152

[Close]

BLAST of CmUC06G114690 vs. TAIR 10
Match: AT1G04270.2 (cytosolic ribosomal protein S15 )

HSP 1 Score: 268.9 bits (686), Expect = 2.6e-72
Identity = 137/153 (89.54%), Postives = 144/153 (94.12%), Query Frame = 0


Query: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60
           MADVE +V  AG  PKKRTFKKF+F+GVDLDALLDMSTD+LVKLF++R RRRF RGLTRK
Sbjct: 1   MADVEPEVAAAG-VPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRK 60

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRK KREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI
Sbjct: 61  PMALIKKLRK-KREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
           GHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct: 121 GHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 151

[Close]

BLAST of CmUC06G114690 vs. TAIR 10
Match: AT5G09500.1 (Ribosomal protein S19 family protein )

HSP 1 Score: 253.4 bits (646), Expect = 1.1e-67
Identity = 131/153 (85.62%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60
           MAD E     A    KKRTFKKFSFRGVDLDALLDMSTD+LVKLF +R RRRF RGLTRK
Sbjct: 1   MADPEV---AAAGIVKKRTFKKFSFRGVDLDALLDMSTDDLVKLFPSRIRRRFSRGLTRK 60

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRKAK EAP GEKP  VRTHLRNMIIVPEMIGS+IGVYNGKTFNQVEIKPEMI
Sbjct: 61  PMALIKKLRKAKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMI 120

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
           GHYLAEFSISYKPVKHGRPG+GAT+SSRFIPLK
Sbjct: 121 GHYLAEFSISYKPVKHGRPGVGATNSSRFIPLK 150

[Close]

BLAST of CmUC06G114690 vs. TAIR 10
Match: AT5G09490.1 (Ribosomal protein S19 family protein )

HSP 1 Score: 249.2 bits (635), Expect = 2.1e-66
Identity = 125/153 (81.70%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 1   MADVEADVPVAGQQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60
           MA+VE DV  A    KKRTFKKFSF+GVDLDALLDM TD+LV+LF +R RRR  RGLTRK
Sbjct: 1   MAEVEPDVSAAA-LAKKRTFKKFSFKGVDLDALLDMPTDDLVELFPSRIRRRMSRGLTRK 60

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
           PMALIKKLRKAK +AP GEKPE VRTHLRNM+I+PEMIGSIIGVYNGKTFNQ+EIKPEMI
Sbjct: 61  PMALIKKLRKAKLDAPAGEKPEVVRTHLRNMVIMPEMIGSIIGVYNGKTFNQIEIKPEMI 120

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
           GHYLAEFSI+YKPV+HG+PG GATHSSRFIPLK
Sbjct: 121 GHYLAEFSITYKPVRHGKPGHGATHSSRFIPLK 152

The following BLAST results are available for this feature:

BLAST of CmUC06G114690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150403.1	1.6e-79	100.00	40S ribosomal protein S15-4 [Cucumis sativus] >XP_008465194.1 PREDICTED: 40S rib...	[more]
KAA0057520.1	1.6e-79	100.00	40S ribosomal protein S15-4 [Cucumis melo var. makuwa]	[more]
TYK08201.1	1.6e-79	100.00	40S ribosomal protein S15-4 [Cucumis melo var. makuwa]	[more]
XP_022930318.1	1.2e-76	98.69	40S ribosomal protein S15-4 [Cucurbita moschata] >XP_023000557.1 40S ribosomal p...	[more]
XP_022958790.1	2.8e-76	98.04	40S ribosomal protein S15-4-like [Cucurbita moschata] >XP_023006761.1 40S riboso...	[more]

BLAST of CmUC06G114690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q945U1	4.6e-74	90.85	40S ribosomal protein S15 OS=Elaeis oleifera OX=80265 GN=RPS15 PE=2 SV=1	[more]
Q08112	5.1e-73	90.20	40S ribosomal protein S15-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15A PE=2 SV=1	[more]
Q9FY64	5.1e-73	90.20	40S ribosomal protein S15-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15D PE=2 SV=1	[more]
P31674	1.5e-72	88.31	40S ribosomal protein S15 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS15 PE=2...	[more]
O65059	9.6e-72	90.60	40S ribosomal protein S15 OS=Picea mariana OX=3335 GN=RPS15 PE=2 SV=1	[more]

BLAST of CmUC06G114690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UQZ4	7.6e-80	100.00	40S ribosomal protein S15-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5D3C8N2	7.6e-80	100.00	40S ribosomal protein S15-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A0A0LLK6	7.6e-80	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G193310 PE=3 SV=1	[more]
A0A1S3CNC4	7.6e-80	100.00	40S ribosomal protein S15-4-like OS=Cucumis melo OX=3656 GN=LOC103502858 PE=3 SV...	[more]
A0A6J1KDZ2	6.0e-77	98.69	40S ribosomal protein S15-4 OS=Cucurbita maxima OX=3661 GN=LOC111494798 PE=3 SV=...	[more]

BLAST of CmUC06G114690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04270.1	3.6e-74	90.20	cytosolic ribosomal protein S15	[more]
AT5G09510.1	3.6e-74	90.20	Ribosomal protein S19 family protein	[more]
AT1G04270.2	2.6e-72	89.54	cytosolic ribosomal protein S15	[more]
AT5G09500.1	1.1e-67	85.62	Ribosomal protein S19 family protein	[more]
AT5G09490.1	2.1e-66	81.70	Ribosomal protein S19 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002222	Ribosomal protein S19/S15	PRINTS	PR00975	RIBOSOMALS19	coord: 106..118 score: 42.93 coord: 118..133 score: 46.98 coord: 86..105 score: 46.13
IPR002222	Ribosomal protein S19/S15	PFAM	PF00203	Ribosomal_S19	coord: 51..136 e-value: 1.7E-33 score: 114.3
IPR002222	Ribosomal protein S19/S15	PIRSF	PIRSF002144	RPS19p_RPS19a_RPS15e_RPS19o	coord: 8..153 e-value: 2.3E-38 score: 128.3
IPR002222	Ribosomal protein S19/S15	PANTHER	PTHR11880	RIBOSOMAL PROTEIN S19P FAMILY MEMBER	coord: 2..153
IPR002222	Ribosomal protein S19/S15	HAMAP	MF_00531	Ribosomal_S19	coord: 49..142 score: 21.249146
IPR005713	Ribosomal protein S19A/S15e	TIGRFAM	TIGR01025	TIGR01025	coord: 20..153 e-value: 4.9E-71 score: 234.8
IPR023575	Ribosomal protein S19/S15, superfamily	GENE3D	3.30.860.10	30s Ribosomal Protein S19; Chain A	coord: 10..153 e-value: 3.1E-73 score: 246.1
IPR023575	Ribosomal protein S19/S15, superfamily	SUPERFAMILY	54570	Ribosomal protein S19	coord: 56..137
None	No IPR available	PANTHER	PTHR11880:SF50	LOW QUALITY PROTEIN: 40S RIBOSOMAL PROTEIN S15	coord: 2..153
IPR020934	Ribosomal protein S19 conserved site	PROSITE	PS00323	RIBOSOMAL_S19	coord: 106..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G114690.1	CmUC06G114690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000028	ribosomal small subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome