CmUC06G114220 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGAAATAGAAGTAGTGAAGTGTGAGTGTTGTGGGTTAAAAGAAGAATGCACAAAAGATTACATTAGTGAAGTGAAGGCTAATTTCGACGCTAAATGGCTTTGTGGCCTTTGTTCACAAGCCGTTGGTGACGAAATTTTGTTCAGATCCAAAAACAACCACCACTCGCCGCCGCCGCCGCCGCCGTCGTCTGGAGCAATTCAAGACGCCGTTAACGCTCACATGCTTTTCTGCCGCAAGTTCAAATCTAACCCTGCCGTTAGAGTCGCTGACGCCATGAAGCAAATCTTGAGAAGGCGCTCAACCGACTTGTCGTCTCAATCCTCTTCTTCTACTAACAATAATTTCTCCACTTCTAATTCTACTTCTTCTTCCCAGGTTCCCGACATGTCTTCTTTCTCTTCCCTTCGATAA ATGGATGAAATAGAAGTAGTGAAGTGTGAGTGTTGTGGGTTAAAAGAAGAATGCACAAAAGATTACATTAGTGAAGTGAAGGCTAATTTCGACGCTAAATGGCTTTGTGGCCTTTGTTCACAAGCCGTTGGTGACGAAATTTTGTTCAGATCCAAAAACAACCACCACTCGCCGCCGCCGCCGCCGCCGTCGTCTGGAGCAATTCAAGACGCCGTTAACGCTCACATGCTTTTCTGCCGCAAGTTCAAATCTAACCCTGCCGTTAGAGTCGCTGACGCCATGAAGCAAATCTTGAGAAGGCGCTCAACCGACTTGTCGTCTCAATCCTCTTCTTCTACTAACAATAATTTCTCCACTTCTAATTCTACTTCTTCTTCCCAGGTTCCCGACATGTCTTCTTTCTCTTCCCTTCGATAA ATGGATGAAATAGAAGTAGTGAAGTGTGAGTGTTGTGGGTTAAAAGAAGAATGCACAAAAGATTACATTAGTGAAGTGAAGGCTAATTTCGACGCTAAATGGCTTTGTGGCCTTTGTTCACAAGCCGTTGGTGACGAAATTTTGTTCAGATCCAAAAACAACCACCACTCGCCGCCGCCGCCGCCGCCGTCGTCTGGAGCAATTCAAGACGCCGTTAACGCTCACATGCTTTTCTGCCGCAAGTTCAAATCTAACCCTGCCGTTAGAGTCGCTGACGCCATGAAGCAAATCTTGAGAAGGCGCTCAACCGACTTGTCGTCTCAATCCTCTTCTTCTACTAACAATAATTTCTCCACTTCTAATTCTACTTCTTCTTCCCAGGTTCCCGACATGTCTTCTTTCTCTTCCCTTCGATAA MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRRRSTDLSSQSSSSTNNNFSTSNSTSSSQVPDMSSFSSLR Homology
BLAST of CmUC06G114220 vs. NCBI nr
Match: XP_038875601.1 (pre-mRNA-splicing factor CWC22 homolog [Benincasa hispida]) HSP 1 Score: 238.0 bits (606), Expect = 4.7e-59 Identity = 131/145 (90.34%), Postives = 131/145 (90.34%), Query Frame = 0
BLAST of CmUC06G114220 vs. NCBI nr
Match: KAA0040802.1 (hypothetical protein E6C27_scaffold333G00170 [Cucumis melo var. makuwa] >TYK17783.1 hypothetical protein E5676_scaffold306G00250 [Cucumis melo var. makuwa]) HSP 1 Score: 223.0 bits (567), Expect = 1.6e-54 Identity = 118/138 (85.51%), Postives = 123/138 (89.13%), Query Frame = 0
BLAST of CmUC06G114220 vs. NCBI nr
Match: XP_004139880.3 (uncharacterized protein LOC101209523 [Cucumis sativus]) HSP 1 Score: 221.9 bits (564), Expect = 3.5e-54 Identity = 120/139 (86.33%), Postives = 124/139 (89.21%), Query Frame = 0
BLAST of CmUC06G114220 vs. NCBI nr
Match: KAG6593885.1 (hypothetical protein SDJN03_13361, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 184.5 bits (467), Expect = 6.2e-43 Identity = 105/136 (77.21%), Postives = 116/136 (85.29%), Query Frame = 0
BLAST of CmUC06G114220 vs. NCBI nr
Match: KAG7026232.1 (hypothetical protein SDJN02_12731, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 183.0 bits (463), Expect = 1.8e-42 Identity = 104/136 (76.47%), Postives = 116/136 (85.29%), Query Frame = 0
BLAST of CmUC06G114220 vs. ExPASy TrEMBL
Match: A0A5D3D0Q9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00250 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 7.6e-55 Identity = 118/138 (85.51%), Postives = 123/138 (89.13%), Query Frame = 0
BLAST of CmUC06G114220 vs. ExPASy TrEMBL
Match: A0A0A0K5L1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G234115 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 1.7e-54 Identity = 120/139 (86.33%), Postives = 124/139 (89.21%), Query Frame = 0
BLAST of CmUC06G114220 vs. ExPASy TrEMBL
Match: A0A6J1KCY5 (uncharacterized protein LOC111494477 OS=Cucurbita maxima OX=3661 GN=LOC111494477 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.5e-39 Identity = 97/128 (75.78%), Postives = 108/128 (84.38%), Query Frame = 0
BLAST of CmUC06G114220 vs. ExPASy TrEMBL
Match: A0A6P6X2S4 (uncharacterized protein LOC113734712 OS=Coffea arabica OX=13443 GN=LOC113737104 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 1.3e-33 Identity = 83/133 (62.41%), Postives = 100/133 (75.19%), Query Frame = 0
BLAST of CmUC06G114220 vs. ExPASy TrEMBL
Match: A0A068TRZ0 (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00026095001 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 1.3e-33 Identity = 83/133 (62.41%), Postives = 100/133 (75.19%), Query Frame = 0
BLAST of CmUC06G114220 vs. TAIR 10
Match: AT3G22540.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 122.5 bits (306), Expect = 2.7e-28 Identity = 67/122 (54.92%), Postives = 83/122 (68.03%), Query Frame = 0
BLAST of CmUC06G114220 vs. TAIR 10
Match: AT4G14819.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 117.1 bits (292), Expect = 1.1e-26 Identity = 65/121 (53.72%), Postives = 78/121 (64.46%), Query Frame = 0
BLAST of CmUC06G114220 vs. TAIR 10
Match: AT1G79770.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 83.6 bits (205), Expect = 1.4e-16 Identity = 41/98 (41.84%), Postives = 60/98 (61.22%), Query Frame = 0
BLAST of CmUC06G114220 vs. TAIR 10
Match: AT5G25840.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 75.5 bits (184), Expect = 3.8e-14 Identity = 40/106 (37.74%), Postives = 60/106 (56.60%), Query Frame = 0
BLAST of CmUC06G114220 vs. TAIR 10
Match: AT1G72510.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 68.6 bits (166), Expect = 4.6e-12 Identity = 54/149 (36.24%), Postives = 74/149 (49.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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