CmUC06G109200 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G109200
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Trigger_N domain-containing protein
Location	CmU531Chr06: 1014153 .. 1018469 (+)
RNA-Seq Expression	CmUC06G109200
Synteny	CmUC06G109200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCACACTAAAACCAACAAAAACTCTTGAAAAAGAAATTCTAGAAAAAGAAAAAAAGAAAAAAACAGAAGGAAAAAAAAAGCCACAACGGCATCGTATTTGGACTCGGATAAGTCTCTACTCTGAGAACCGGAGAAAGAAACTTCAAACTGAAGCGCTGAGCCGCGCTTGGAAAAATGGTGTCCGCCACCGCCACCGCCACCGCCACCGCAACTGCAACGGTAACCGACATTGCTTCAGAATTCCGGCGGCCAATATTCACCAAAGTAAGCAATTCTATGCATTAGCCTTTTTCGATTCTAAATATTCCTCAGAAACCAAACCAATGACTCGAATCTCTAAGCTCCACCGCATTTTGCGGCCTTCCGATAAGTTTAGGATATTTTCACTTCAAATTCGCTTTTGTGTTTCAGGTTCCTGTTAAGGGCTATTGCCGCAATGCCCTGGTTTGTCTAAACTTTGGAGGTGTTGAATTTGATAATGTACAAGATGGGTTGTGTAGGAGGTAAACATGTATTTTGGTTAGTTTCCAATTTCGATGTTGATTCTTAATTTCTTGTTTGTTTAATGAGAAGTGTAATGACATATATAGCTCGTTCGTTTTCTATTTGGTGAATTGTGCATAAAAACTGATGGATAGAAGTGGGGAACATTTTTTCATTGCCAGGTCGTCATTTTCTTATAGTCCCCATAAAATGGGTTCCAGATTTTTGTCCAAACCGACGTCCGTAGCTAGTTCAGGTAATTCTGCATACTTCGTTATCATCTTGGTTGAACCTTTTACAGTAAAGACTGAATTACAAATTTTAAACTATAAGAACTAAGTCGTTTCATACTTAAAGTTGATTAAGTCGGTTATTGGAAATTTTAATCTACAGGAATCAAATTGTTAGATACTGAGGTTCGTGGACTAATTGAATTGTTTTATTTGATAGTATATTTTAACCTTTACAATTATTCTTTTCTGCTCGTCCCCTTGTTTTCTGGGAGTTTAGTTTATTTTTAATGTAGGATGGGAAGAGAAGTACAAAAATAGAGTAATTGGGAAGCGAATGACACAAGTAAGATATTATTACTGGTGAATTCCTGTTTAGTATGCACGAAGAGAAGCAAGCATTATTATCTTCTATATCATGTATTAGAAAATTGTAATAAATCGTTGGTAAGAACACAATAACGGTTTTGAATATTGCAAATCATGCTTATGTAACATGATTGTAGCCCTAATAAATCATGGGTAAGAAACACAATAACAGATTTGGTAAAACTTATCCCCGTTTTGTCATTATTTTGTGAGTTATTAACAGTCACTTGTCAATCAACTCTAGTTGTACAAAAAAGACCCTTTCAGCTTAGGCTTATGTTGTTTTGTTGGTCTTCTGTTTTGATGTCATAGGTTTCGAGGCAGCCATCACAGATTACAAAGGCAATGCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAAGATGAAAACCAGATACAAGTAAGGCTTACCCATGTGAACTAGTTGACGCATCCATTACAATTTTTGTTGCAGCATAGAGTTTTTTTTTTTTTTTTTCCTTTCCTTTCTTTTCTTTTTTTAATTAAACTTTAAGAATCAATTTTGTTAATGGTATGAAATTACGAAAGAAGGGGGAAAAACCTACTCCAAATGAGACTCTCCAATTGGATATAAAAGAAGCATGGTGAAAGAGATGAGAGCATTTACACTAAGAAATTGTCGTAAAAGCGATAGAAGAAAGCCCTTGTAAAGTGCATCCATAAGAGCTTTTTTTCTTAGTTGAAAGGATGACCCCCAAAAACATACTAGAGGAGGAGGAGGAGATTTTGAGGGAGAGCTGTATGTCGACCCCCCAAAGCATGATAGTTGCCCCCATAATTTTGATGCAAATTTGCAGGACACAGAAAGACCTTGAGACTTAGGAGCTGTCTATGCGCATGACACAAACTACTAGACTTTGTTCAAGAAAATAATGCATCCTTGAGATACCACTGTCTCAATATCTAATCTCTCACTCTCCCAATGCCACCTCACTTAGTTACAACTTCTGCCCACCAAAGTTTAAGAACAATCTACTCTCAATGTAAGATTTTGTTAGGAATGTTAGCAGGGAACTATTTGGGATATTATTAGGTTATTTGGAGGGCATAGTTTGTTAGAAAAGAGGTTATAAACGCAGTTGCATAGAGGGGTTTGAGATAGGCAGAGTATAGACATTTTGGGAGAGTCCACGCCTCTCAAAGTGTTTGGTTTTCGTAAATTTTCTTTTATATGGGAATACAATTTAAGTGTTATTTTCTTACTTCCATTCTCAATCAAAATTGGGTTCCTATCATCCTTCCCTTTATCATCCTTCCCTTTCATGTTATCTTTGGAACGCATTTATTGTTAGTGACCTATAAAAAATGTCTAATGAAATATTATTAACAGCTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAAGTTTTGGCAAACTTAGCCCGTTCAGCACCACCAATGCCAGGATTTCGTAGGCAAAAAGGAGGTAGTACCACGATTTTCCTCCTCTTCCACCTCGAATGTTACAACCATTCATTCATTTGCAACATAAGTCTTGTACATGTTCACTATCCATGTAGACAAATATGGGAATTGAGAAGTGCCTTTCCTGTCCATATGCGTTCATATGTGTAGCTGCTTTTACAGCTTATAAGTTCTTATTTCTCATAGCAGATGACTTGACTTTATATGGTTTCTAATGTTTTCCTGTCTTCATGCCGTGGATGCTTTGCCAGGGAAAACATCAAATGTGAGTTGCTTCTCTTTGCTTTTTATACTTTACCCTTTGGGTTTCCAAAAATTTTCAAATTCGTTGTTTAGTTCTAACTCATTGAATATATGCCTTGTCATCTTTGATAATATTCCCAAGTTTTGGTATTTTTATTTGTAATGATTTAGTTTTGATGTTTTATTGTGAACACATTTGAGTCATCGAGTTACAAATCTTATTATGAAGTTGATTGGAAAATAATCTGTTCATGAAATATGGGCAAGTTATAAGAGGTGCTTCTCGCACTTTAGCCTCGAACATTTGTTTTTTGATTTGGTTAAATTTGATTTCACTCATGATTCATTTTTTCTCAGTATCCTTATTCATTTTTTGGCATGTTATGCGGGGATTTACATCCTAGTTACAAATAGTATTCTATTCTTCCACAAGGTTTTTATTTCTCAATAATTAATTCCTCCAGGTCCCAAAAAGCTTCCTCTTAGAAGTCCTTGGTAAGGACCGAGTCACGAAGTTTGTCATACAAGAAATATTGAACTCAACTATGGCAGATTATGCAAAGAAGGCAAGTTTTATCCTCATTGCTTTGCTTCTTATACCTAGTGCCTACGTGGTGATTGTAACTTGGAGATGTTTTTAAATTGGTTTTTCTAGATAGCTTGTAGAAGTCAATGATATTTGGGTAAATAAAATCACTATCCATGAACAACACACCATTTCAAAAGATATAACAAATTTTACGAATAGACAAATGTCTTGTTAATTTGGCTTGGCGTGGCTAACAAATGATGGATGGAAAGAAGTTAACCGCTGGATAAAATAGGAGTGACATGGTTTATGGATTGAATTTGATATATTACTTCAAAGTAAATGATATGTTTCATGTGTTGCCTTCTTTTGTTAAAGTTGTCCATTTGCCTTTATTATTTGTCTAGTTGTGCCCAATCAACTGGTGTCTATCTAATTAGAGCATATGATGTTACCATCTAGTAAATTGTATTGATGTTAGAAAATAGATATACTATAATAAAACCATTCAAAATTTAAATAACTAATTGATTTTTTTTTAAGTTCAAAGACTAAATGGACATGGTTCACAATTAGATTTGTAATTTATCCAAATGTGATTATCCAAATATCAAAAACATAAGCTCTTTTTTTTTTTCTTTTTTCTTTGGACTCCAATACAGGAAAACATAAATGTAAAGGACAAGAAGGTTAACACAACACAAACAGCAGATGAACTGAAAGTATTGTTTAGTCCAGGAAAAGATTTTGGTTTCAATGCCATACTTGAACTTGAATCTGGTTCAGATGGTGAAAATTGAGCCAAACAGGTCCCATTTTCCAAGTGAAGATTTTGTCCACTTATTCTTCAATGGGCCTCCTTATGTCAAAGTCTTGGAAATTTTACTTGAAATTGATGAAAGCTTAATTTGCATAGTTGAATACCAATTCTAGTTTTGTTTGTTTCCATATAATTTGTTCTGTTGAAGTAAAAAATAAAACCATCTAATTTGTACA

mRNA sequence

ATCACACTAAAACCAACAAAAACTCTTGAAAAAGAAATTCTAGAAAAAGAAAAAAAGAAAAAAACAGAAGGAAAAAAAAAGCCACAACGGCATCGTATTTGGACTCGGATAAGTCTCTACTCTGAGAACCGGAGAAAGAAACTTCAAACTGAAGCGCTGAGCCGCGCTTGGAAAAATGGTGTCCGCCACCGCCACCGCCACCGCCACCGCAACTGCAACGGTAACCGACATTGCTTCAGAATTCCGGCGGCCAATATTCACCAAAGTTCCTGTTAAGGGCTATTGCCGCAATGCCCTGGTTTGTCTAAACTTTGGAGGTGTTGAATTTGATAATGTACAAGATGGGTTGTGTAGGAGCCCTAATAAATCATGGGTAAGAAACACAATAACAGATTTGGTAAAACTTATCCCCGTTTTGTCATTATTTTGTTTCGAGGCAGCCATCACAGATTACAAAGGCAATGCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAAGATGAAAACCAGATACAAGTCCCAAAAAGCTTCCTCTTAGAAGTCCTTGGTAAGGACCGAGTCACGAAGTTTGTCATACAAGAAATATTGAACTCAACTATGGCAGATTATGCAAAGAAGGCAAGTTTTATCCTCATTGCTTTGCTTCTTATACCTAGTGCCTACGTGGAAAACATAAATGTAAAGGACAAGAAGGTTAACACAACACAAACAGCAGATGAACTGAAAGTATTGTTTAGTCCAGGAAAAGATTTTGGTTTCAATGCCATACTTGAACTTGAATCTGGTTCAGATGGTGAAAATTGAGCCAAACAGGTCCCATTTTCCAAGTGAAGATTTTGTCCACTTATTCTTCAATGGGCCTCCTTATGTCAAAGTCTTGGAAATTTTACTTGAAATTGATGAAAGCTTAATTTGCATAGTTGAATACCAATTCTAGTTTTGTTTGTTTCCATATAATTTGTTCTGTTGAAGTAAAAAATAAAACCATCTAATTTGTACA

Coding sequence (CDS)

ATGGTGTCCGCCACCGCCACCGCCACCGCCACCGCAACTGCAACGGTAACCGACATTGCTTCAGAATTCCGGCGGCCAATATTCACCAAAGTTCCTGTTAAGGGCTATTGCCGCAATGCCCTGGTTTGTCTAAACTTTGGAGGTGTTGAATTTGATAATGTACAAGATGGGTTGTGTAGGAGCCCTAATAAATCATGGGTAAGAAACACAATAACAGATTTGGTAAAACTTATCCCCGTTTTGTCATTATTTTGTTTCGAGGCAGCCATCACAGATTACAAAGGCAATGCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAAGATGAAAACCAGATACAAGTCCCAAAAAGCTTCCTCTTAGAAGTCCTTGGTAAGGACCGAGTCACGAAGTTTGTCATACAAGAAATATTGAACTCAACTATGGCAGATTATGCAAAGAAGGCAAGTTTTATCCTCATTGCTTTGCTTCTTATACCTAGTGCCTACGTGGAAAACATAAATGTAAAGGACAAGAAGGTTAACACAACACAAACAGCAGATGAACTGAAAGTATTGTTTAGTCCAGGAAAAGATTTTGGTTTCAATGCCATACTTGAACTTGAATCTGGTTCAGATGGTGAAAATTGA

Protein sequence

MVSATATATATATATVTDIASEFRRPIFTKVPVKGYCRNALVCLNFGGVEFDNVQDGLCRSPNKSWVRNTITDLVKLIPVLSLFCFEAAITDYKGNAITLKNAKVVVESEDENQIQVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKASFILIALLLIPSAYVENINVKDKKVNTTQTADELKVLFSPGKDFGFNAILELESGSDGEN

Homology

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BLAST of CmUC06G109200 vs. NCBI nr
Match: XP_038906537.1 (uncharacterized protein LOC120092511 [Benincasa hispida])

HSP 1 Score: 256.9 bits (655), Expect = 1.5e-64
Identity = 151/245 (61.63%), Postives = 163/245 (66.53%), Query Frame = 0


Query: 9   TATATATVTDIASEFRRPIFTKVPVKGYCRNALVCLNFGGVEFDNVQDGLCRSPNKSWVR 68
           +ATATAT T+IASEFR PIFT+VPVKGYCRN LVCLNFGGVEFDNVQDGLCR  + S+  
Sbjct: 3   SATATATATNIASEFRWPIFTQVPVKGYCRNPLVCLNFGGVEFDNVQDGLCRRSSFSYSS 62

Query: 69  NTITDLVKLIPV-LSLFCFEAAITDYKGNAITLKNAKVVVESEDENQIQ----------- 128
           + +       P  ++    EAAITDYKGNAITLKNAKVVVESE+EN+IQ           
Sbjct: 63  HKVGSRFLSKPTSIASSGLEAAITDYKGNAITLKNAKVVVESEEENKIQLRVDLTGDETQ 122

Query: 129 ------------------------------VPKSFLLEVLGKDRVTKFVIQEILNSTMAD 188
                                         VPKSFLLEVLGKDRV KFVIQEILNSTMAD
Sbjct: 123 KVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVIKFVIQEILNSTMAD 182

Query: 189 YAKKASFILIALLLIPSAYVENINVKDKKVNTTQTADELKVLFSPGKDFGFNAILELESG 212
           YAKK                ENINVKDKKVNTTQTADELKVLFSPGK+FGFNAILELES 
Sbjct: 183 YAKK----------------ENINVKDKKVNTTQTADELKVLFSPGKEFGFNAILELESA 231

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BLAST of CmUC06G109200 vs. NCBI nr
Match: XP_011656737.1 (uncharacterized protein LOC101212225 [Cucumis sativus] >KGN46335.1 hypothetical protein Csa_004841 [Cucumis sativus])

HSP 1 Score: 254.6 bits (649), Expect = 7.5e-64
Identity = 150/247 (60.73%), Postives = 165/247 (66.80%), Query Frame = 0


Query: 7   TATATATATVTDIASEFRRPIFTKVPVKGYCRNALVCLNFGGVEFDNVQDGLCRSPNKSW 66
           +ATATATATVT+IASEF RPIFTKVPVKGYC NALVCLNFGGVEFDNV+DGLCR  + S+
Sbjct: 3   SATATATATVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSFSY 62

Query: 67  VRNTITDLVKLIPV-LSLFCFEAAITDYKGNAITLKNAKVVVESEDENQIQ--------- 126
             + I       P  ++    EAAITDYKGN ITLKNAKVVVESE+EN+IQ         
Sbjct: 63  SFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDE 122

Query: 127 --------------------------------VPKSFLLEVLGKDRVTKFVIQEILNSTM 186
                                           VPKSFLLEVLGKDRVTKF+IQEILNSTM
Sbjct: 123 TQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNSTM 182

Query: 187 ADYAKKASFILIALLLIPSAYVENINVKDKKVNTTQTADELKVLFSPGKDFGFNAILELE 212
            DYAKK                ENINVKDKKV+TTQTADELKVLF+PGK+FGFNAILELE
Sbjct: 183 VDYAKK----------------ENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELE 233

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BLAST of CmUC06G109200 vs. NCBI nr
Match: XP_008460020.1 (PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo])

HSP 1 Score: 252.3 bits (643), Expect = 3.7e-63
Identity = 152/248 (61.29%), Postives = 165/248 (66.53%), Query Frame = 0


Query: 7   TATATATATVTDIA-SEFRRPIFTKVPVKGYCRNALVCLNFGGVEFDNVQDGLCRSPNKS 66
           +ATATATATVT+IA SEF RPIFTKV VKGYC NALVCLNFGGVEFDNVQDGLCR  + S
Sbjct: 3   SATATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFS 62

Query: 67  WVRNTITDLVKLIPV-LSLFCFEAAITDYKGNAITLKNAKVVVESEDENQIQ-------- 126
           +  + I       P  ++    EAA+TDYKGNAITLKNAKVVVESE+EN+IQ        
Sbjct: 63  YSSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLTGD 122

Query: 127 ---------------------------------VPKSFLLEVLGKDRVTKFVIQEILNST 186
                                            VPKSFLLEVLGKDRVTKFVIQEILNST
Sbjct: 123 ETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNST 182

Query: 187 MADYAKKASFILIALLLIPSAYVENINVKDKKVNTTQTADELKVLFSPGKDFGFNAILEL 212
           MADYAKK                ENINVKD KVNTTQTADELKVLF+PGK+FGFNAILEL
Sbjct: 183 MADYAKK----------------ENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILEL 234

[Close]

BLAST of CmUC06G109200 vs. NCBI nr
Match: XP_022155406.1 (uncharacterized protein LOC111022553 [Momordica charantia])

HSP 1 Score: 226.9 bits (577), Expect = 1.7e-55
Identity = 134/240 (55.83%), Postives = 153/240 (63.75%), Query Frame = 0


Query: 10  ATATATVTDIASEFRRPIFTKVPVKGYCRNALVCLNFGGVEFDNVQDGLCRSPNKSWVRN 69
           A+ATATVT++ASE+RR  F KVPVKGYCR+ L C N GGVEFDNVQ+GLCR  + S   +
Sbjct: 2   ASATATVTNLASEYRRASFIKVPVKGYCRSVLACSNSGGVEFDNVQNGLCRRSSFSCSPH 61

Query: 70  TITDLVKLIPV-LSLFCFEAAITDYKGNAITLKNAKVVVESEDENQIQ------------ 129
            +       P  ++    EAAITDYKGNAI LKNAK+VVESEDEN IQ            
Sbjct: 62  KLGSRFLSRPTSIASSGLEAAITDYKGNAIALKNAKIVVESEDENLIQLRVDLSGDETQK 121

Query: 130 -----------------------------VPKSFLLEVLGKDRVTKFVIQEILNSTMADY 189
                                        VPKSFLLEVLG++RVTKFVIQEILNSTMADY
Sbjct: 122 IFDQVLTNLARSAPPMPGFRMQKGGKTSNVPKSFLLEVLGEERVTKFVIQEILNSTMADY 181

Query: 190 AKKASFILIALLLIPSAYVENINVKDKKVNTTQTADELKVLFSPGKDFGFNAILELESGS 208
           AKK                EN+NVKDKKVNTTQTADELK+LF+PGK+FGFNAILELES +
Sbjct: 182 AKK----------------ENVNVKDKKVNTTQTADELKLLFTPGKEFGFNAILELESAN 225

[Close]

BLAST of CmUC06G109200 vs. NCBI nr
Match: XP_023004174.1 (uncharacterized protein LOC111497577 [Cucurbita maxima])

HSP 1 Score: 226.5 bits (576), Expect = 2.2e-55
Identity = 143/254 (56.30%), Postives = 158/254 (62.20%), Query Frame = 0


Query: 6   ATATATATATVTDIASEFRRPIFTKVPVKGYCRNALVCLNFGGVEFDNVQDGLCRSPNKS 65
           A+ATATATATV +IASEFRRP+FTKVPV G  RNAL+C+NFGGVEF+NVQD LC   + S
Sbjct: 2   ASATATATATVANIASEFRRPVFTKVPVNGRRRNALICMNFGGVEFENVQDRLCTRSSVS 61

Query: 66  WVRNTITDLVKLIP-VLSLFCFEAAITDYKGNAITLKNAKVVVESEDENQIQ-------- 125
           +    +       P  ++    EAAITDYKG AITLKNAK+VVESEDEN+IQ        
Sbjct: 62  YSLLVVGSRFLSRPTAIASSGLEAAITDYKG-AITLKNAKIVVESEDENKIQLRVNLTGD 121

Query: 126 ---------------------------------VPKSFLLEVLGKDRVTKFVIQEILNST 185
                                            VPKSFLLEVLGKDRVTKFVIQEILNST
Sbjct: 122 ETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNST 181

Query: 186 MADYAKKASFILIALLLIPSAYVENINVKDKKVNTTQTADELKVLFSPGKDFGFNAILEL 212
           MADYAKK                ENI VKDK VNTTQT DELKVLF PGK+FGFNAILEL
Sbjct: 182 MADYAKK----------------ENIKVKDKMVNTTQTEDELKVLFRPGKEFGFNAILEL 238

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BLAST of CmUC06G109200 vs. ExPASy TrEMBL
Match: A0A0A0K988 (Trigger_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G086160 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 3.6e-64
Identity = 150/247 (60.73%), Postives = 165/247 (66.80%), Query Frame = 0


Query: 7   TATATATATVTDIASEFRRPIFTKVPVKGYCRNALVCLNFGGVEFDNVQDGLCRSPNKSW 66
           +ATATATATVT+IASEF RPIFTKVPVKGYC NALVCLNFGGVEFDNV+DGLCR  + S+
Sbjct: 3   SATATATATVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSFSY 62

Query: 67  VRNTITDLVKLIPV-LSLFCFEAAITDYKGNAITLKNAKVVVESEDENQIQ--------- 126
             + I       P  ++    EAAITDYKGN ITLKNAKVVVESE+EN+IQ         
Sbjct: 63  SFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDE 122

Query: 127 --------------------------------VPKSFLLEVLGKDRVTKFVIQEILNSTM 186
                                           VPKSFLLEVLGKDRVTKF+IQEILNSTM
Sbjct: 123 TQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNSTM 182

Query: 187 ADYAKKASFILIALLLIPSAYVENINVKDKKVNTTQTADELKVLFSPGKDFGFNAILELE 212
            DYAKK                ENINVKDKKV+TTQTADELKVLF+PGK+FGFNAILELE
Sbjct: 183 VDYAKK----------------ENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELE 233

[Close]

BLAST of CmUC06G109200 vs. ExPASy TrEMBL
Match: A0A1S3CBN2 (uncharacterized protein LOC103498959 OS=Cucumis melo OX=3656 GN=LOC103498959 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.8e-63
Identity = 152/248 (61.29%), Postives = 165/248 (66.53%), Query Frame = 0


Query: 7   TATATATATVTDIA-SEFRRPIFTKVPVKGYCRNALVCLNFGGVEFDNVQDGLCRSPNKS 66
           +ATATATATVT+IA SEF RPIFTKV VKGYC NALVCLNFGGVEFDNVQDGLCR  + S
Sbjct: 3   SATATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFS 62

Query: 67  WVRNTITDLVKLIPV-LSLFCFEAAITDYKGNAITLKNAKVVVESEDENQIQ-------- 126
           +  + I       P  ++    EAA+TDYKGNAITLKNAKVVVESE+EN+IQ        
Sbjct: 63  YSSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLTGD 122

Query: 127 ---------------------------------VPKSFLLEVLGKDRVTKFVIQEILNST 186
                                            VPKSFLLEVLGKDRVTKFVIQEILNST
Sbjct: 123 ETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNST 182

Query: 187 MADYAKKASFILIALLLIPSAYVENINVKDKKVNTTQTADELKVLFSPGKDFGFNAILEL 212
           MADYAKK                ENINVKD KVNTTQTADELKVLF+PGK+FGFNAILEL
Sbjct: 183 MADYAKK----------------ENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILEL 234

[Close]

BLAST of CmUC06G109200 vs. ExPASy TrEMBL
Match: A0A6J1DRL2 (uncharacterized protein LOC111022553 OS=Momordica charantia OX=3673 GN=LOC111022553 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 8.1e-56
Identity = 134/240 (55.83%), Postives = 153/240 (63.75%), Query Frame = 0


Query: 10  ATATATVTDIASEFRRPIFTKVPVKGYCRNALVCLNFGGVEFDNVQDGLCRSPNKSWVRN 69
           A+ATATVT++ASE+RR  F KVPVKGYCR+ L C N GGVEFDNVQ+GLCR  + S   +
Sbjct: 2   ASATATVTNLASEYRRASFIKVPVKGYCRSVLACSNSGGVEFDNVQNGLCRRSSFSCSPH 61

Query: 70  TITDLVKLIPV-LSLFCFEAAITDYKGNAITLKNAKVVVESEDENQIQ------------ 129
            +       P  ++    EAAITDYKGNAI LKNAK+VVESEDEN IQ            
Sbjct: 62  KLGSRFLSRPTSIASSGLEAAITDYKGNAIALKNAKIVVESEDENLIQLRVDLSGDETQK 121

Query: 130 -----------------------------VPKSFLLEVLGKDRVTKFVIQEILNSTMADY 189
                                        VPKSFLLEVLG++RVTKFVIQEILNSTMADY
Sbjct: 122 IFDQVLTNLARSAPPMPGFRMQKGGKTSNVPKSFLLEVLGEERVTKFVIQEILNSTMADY 181

Query: 190 AKKASFILIALLLIPSAYVENINVKDKKVNTTQTADELKVLFSPGKDFGFNAILELESGS 208
           AKK                EN+NVKDKKVNTTQTADELK+LF+PGK+FGFNAILELES +
Sbjct: 182 AKK----------------ENVNVKDKKVNTTQTADELKLLFTPGKEFGFNAILELESAN 225

[Close]

BLAST of CmUC06G109200 vs. ExPASy TrEMBL
Match: A0A6J1KVH6 (uncharacterized protein LOC111497577 OS=Cucurbita maxima OX=3661 GN=LOC111497577 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.1e-55
Identity = 143/254 (56.30%), Postives = 158/254 (62.20%), Query Frame = 0


Query: 6   ATATATATATVTDIASEFRRPIFTKVPVKGYCRNALVCLNFGGVEFDNVQDGLCRSPNKS 65
           A+ATATATATV +IASEFRRP+FTKVPV G  RNAL+C+NFGGVEF+NVQD LC   + S
Sbjct: 2   ASATATATATVANIASEFRRPVFTKVPVNGRRRNALICMNFGGVEFENVQDRLCTRSSVS 61

Query: 66  WVRNTITDLVKLIP-VLSLFCFEAAITDYKGNAITLKNAKVVVESEDENQIQ-------- 125
           +    +       P  ++    EAAITDYKG AITLKNAK+VVESEDEN+IQ        
Sbjct: 62  YSLLVVGSRFLSRPTAIASSGLEAAITDYKG-AITLKNAKIVVESEDENKIQLRVNLTGD 121

Query: 126 ---------------------------------VPKSFLLEVLGKDRVTKFVIQEILNST 185
                                            VPKSFLLEVLGKDRVTKFVIQEILNST
Sbjct: 122 ETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNST 181

Query: 186 MADYAKKASFILIALLLIPSAYVENINVKDKKVNTTQTADELKVLFSPGKDFGFNAILEL 212
           MADYAKK                ENI VKDK VNTTQT DELKVLF PGK+FGFNAILEL
Sbjct: 182 MADYAKK----------------ENIKVKDKMVNTTQTEDELKVLFRPGKEFGFNAILEL 238

[Close]

BLAST of CmUC06G109200 vs. ExPASy TrEMBL
Match: A0A6J1H8V8 (uncharacterized protein LOC111461115 OS=Cucurbita moschata OX=3662 GN=LOC111461115 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 3.4e-54
Identity = 140/252 (55.56%), Postives = 153/252 (60.71%), Query Frame = 0


Query: 10  ATATATVTDIASEFRRPIFTKVPVKGYCRNALVCLNFGGVEFDNVQDGLCRSPNKSWVRN 69
           A+ATATV +IASEFRRP+FTKVPV G  RNALVCLNFGGVEF+NVQD LC   + S+   
Sbjct: 2   ASATATVANIASEFRRPVFTKVPVNGRRRNALVCLNFGGVEFENVQDRLCTRSSVSYSPL 61

Query: 70  TITDLVKLIP-VLSLFCFEAAITDYKGNAITLKNAKVVVESEDENQIQ------------ 129
            +       P  ++    EAAITDYKG AITLKNAK+VVESEDEN+IQ            
Sbjct: 62  VVGSRFLSRPTAIASSGLEAAITDYKG-AITLKNAKIVVESEDENKIQLRVDLTGDETQK 121

Query: 130 -----------------------------VPKSFLLEVLGKDRVTKFVIQEILNSTMADY 189
                                        VPKSFLLEVLGKDRVTKFVIQEILNSTM DY
Sbjct: 122 VFDQVLTNLARSAPLMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMVDY 181

Query: 190 AKKASFILIALLLIPSAYVENINVKDKKVNTTQTADELKVLFSPGKDFGFNAIL------ 212
           AKK                ENI VKDK VNTTQT DELK LF PGK+FGFNAIL      
Sbjct: 182 AKK----------------ENIKVKDKMVNTTQTEDELKALFRPGKEFGFNAILELELEL 236

[Close]

BLAST of CmUC06G109200 vs. TAIR 10
Match: AT2G30695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 253 Blast hits to 253 proteins in 72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). )

HSP 1 Score: 52.8 bits (125), Expect = 4.0e-07
Identity = 29/91 (31.87%), Postives = 51/91 (56.04%), Query Frame = 0


Query: 117 VPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKASFILIALLLIPSAYVENINVKDKKV 176
           +PK  LLE+LG  +V K VI++++NS + DY K+                E++ V  K++
Sbjct: 126 IPKDVLLEILGYSKVYKQVIKKLINSAIEDYVKQ----------------EDLKV-GKEL 185

Query: 177 NTTQTADELKVLFSPGKDFGFNAILELESGS 208
              Q+ ++L+  F PG+ F F+A ++L+  S
Sbjct: 186 TVVQSYEDLEETFEPGESFSFDATIKLQEAS 199

[Close]

BLAST of CmUC06G109200 vs. TAIR 10
Match: AT2G30695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 52.8 bits (125), Expect = 4.0e-07
Identity = 29/91 (31.87%), Postives = 51/91 (56.04%), Query Frame = 0


Query: 117 VPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKASFILIALLLIPSAYVENINVKDKKV 176
           +PK  LLE+LG  +V K VI++++NS + DY K+                E++ V  K++
Sbjct: 126 IPKDVLLEILGYSKVYKQVIKKLINSAIEDYVKQ----------------EDLKV-GKEL 185

Query: 177 NTTQTADELKVLFSPGKDFGFNAILELESGS 208
              Q+ ++L+  F PG+ F F+A ++L+  S
Sbjct: 186 TVVQSYEDLEETFEPGESFSFDATIKLQEAS 199

The following BLAST results are available for this feature:

BLAST of CmUC06G109200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906537.1	1.5e-64	61.63	uncharacterized protein LOC120092511 [Benincasa hispida]	[more]
XP_011656737.1	7.5e-64	60.73	uncharacterized protein LOC101212225 [Cucumis sativus] >KGN46335.1 hypothetical ...	[more]
XP_008460020.1	3.7e-63	61.29	PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo]	[more]
XP_022155406.1	1.7e-55	55.83	uncharacterized protein LOC111022553 [Momordica charantia]	[more]
XP_023004174.1	2.2e-55	56.30	uncharacterized protein LOC111497577 [Cucurbita maxima]	[more]

BLAST of CmUC06G109200 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC06G109200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K988	3.6e-64	60.73	Trigger_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G086160 P...	[more]
A0A1S3CBN2	1.8e-63	61.29	uncharacterized protein LOC103498959 OS=Cucumis melo OX=3656 GN=LOC103498959 PE=...	[more]
A0A6J1DRL2	8.1e-56	55.83	uncharacterized protein LOC111022553 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1KVH6	1.1e-55	56.30	uncharacterized protein LOC111497577 OS=Cucurbita maxima OX=3661 GN=LOC111497577...	[more]
A0A6J1H8V8	3.4e-54	55.56	uncharacterized protein LOC111461115 OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]

BLAST of CmUC06G109200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30695.1	4.0e-07	31.87	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein ...	[more]
AT2G30695.2	4.0e-07	31.87	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein ...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR30560:SF4	OS01G0894700 PROTEIN	coord: 67..117 coord: 116..151 coord: 167..207
IPR005215	Trigger factor	PANTHER	PTHR30560	TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE	coord: 67..117
IPR005215	Trigger factor	PANTHER	PTHR30560	TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE	coord: 116..151 coord: 167..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G109200.1	CmUC06G109200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0015031	protein transport