CmUC06G108710 (gene) Watermelon (USVL531) v1

Overview
NameCmUC06G108710
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionTubulin-specific chaperone A
LocationCmU531Chr06: 590073 .. 595083 (-)
RNA-Seq ExpressionCmUC06G108710
SyntenyCmUC06G108710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAATGAGGTGAGAATGGAAACAAACCATAGAGTAAGGCAGATAGACAATCCTTTGAAGGAGAAGCCATTGGAGGCCATAGCCAAGAAACCCCATGGAAGCAGCCATGAACATCACCACCCACAAAGGAAAATATAAGAGAGCGACGCCAGAGCACCACCCGAAGGCCTTGCCAAGGTCGGAAGCCACCGCCAGATAGTTGAGCTCCACCTGCGACATCCCCAGAGCCGCCTTCAGATCGGAAGAATAAGAGGGGAAATCAAAATTTGTGCCTGCAAATGCCTGAATCCATATTGCCGCCACCAGCACCACCCATTGTCCAGGTTGGTTCAGCATCCTTTTCTGTTTTTTGATTGGAAGAAGGGGAATTTGTGGAGCTTTTCTCTGCTTTATTTTCATGGCGGAGGCCTGGGGAGAATAATGATTGAAAAAAGCGTTAGGGGAATGGTTGGGTCGGTAGGCCATACCAGAAGGGTGGGTAAGAAAGTGGTTGGATCCAACGATGGTTGATGACTGATGTAACCAAAATTGTCCTTTTCTTTGAATGCATAGCTTCAAATATGCCAAAATTAGCGTAGAACGTAATTCCATCAGTTTTTGTTTCATGTTATTGTTACCAACTATTTGGGAAGTTTCTCAAAATTTATCTTCACAGCATTACCAGGTGATTCAATTTTGACTCTAATTTGCAATTTATTTATTATTATTTTACTTTTTTAGGTTCAATAAAATGAGAAATCGAATTATTAACTTTTAAAATACACAAGTTTTCAGAAGTCCAGACAAATTTTAGAACTTAAATCTTTTTTTTAAAGAAAAATTTAGCTAAACCTATATTTTCAAGAAAGTTTAATTATATATTGATATTATGGAAAAATAAACACAATTATTACATACACAATAAATAAATATATATATATATATATATATATATATATATATATAAATAAATAAAAATAAAAATAAAAATCACCAAATGAATCCTATATTTTCAAGACACTCATGAGATGAATGCCCATATTGATTCGCTAAAAATATCATCAAAACTAAAATTTAAGTTGTAAATTTAAATACTATTTTAGGTTACATACTTTCAAGTTTTGTTTATTTTAGTTCTTGTACTTTCAAAATATTAATTTTGATTCTTTATTTTCAACATTGGTTTATTTTGATCTCATACTTTTAAGGAGTGGTCATTTTAATCCTTTTAAAATAAAAATACAAGAACCAAAATGGTCAATTGTTAGAAGTTCAAATACCAAAATAAACATTTTGAAACATAAAGACTAAAATGAACCAAAATTGAGAGTAAAAAAACTAAAATAAACATTTTGAAAGTATAATAACCTAAGTAGTATTTAAACTTAATTTTTATGACGTAACAAGTAAAAATGTATACGTCAATTAGCGCTTAGCTTTGCTCGAGTTGGCAACATATTTAATGTTTATAGTTTGAGATTGTTGTAACTTTCAAAATAATTGATAGCAAAAGAGCTCTTAGAAGTATAAATTGGGACATGAAGTAAATGTAGTGTTTGATAAATTTCTATTTTAAACTCGAAAAAATAGGGTATTTGATAAAATTAGTACGAAATTTTTATGATTTAACTATAATGACTACAGTAGACATATTGTTTCAATTATATATTGATATTTTATATGAAAGTTACCATAAGATAATTATTTTAAAATTTTCATTTACATGCTTTAGATCTAAAATGTGCTATTTTCAAATATAGCAAAACAAACCAAACTATTTACAAATATATAGAAATTTCATTGTCTATGAAAGTTATTATTCAAACAATACAAGTATGTGATAGAAGTTTATCGCAGTTTATCATTAATAGACAGTGAAATTTTTTTATATTTATAAATAGTTTGATATTTTTTCTATTTATAATAATTTTTCTTAAAAACAAACCTTAAATTATTTGATAAATATTAAAAAAATTGGTATTAAAAATTGAGAAGTGAATAGAAAGCTAGTGCAAATGTGATTTTGAATATAAGAGCAGTGATTTAAGATAAATTAATAAATAATCATATTTACTAAACATGAAACAACTTAAATGATTAGTTTGTGAGTGGTTTTGAAATTATTAAAATCATTTTGTTATTAATCACTTTGAAACACATTTTTATCATTCAAAATTAATTTAACATTTAATTTTATACTTTTAAATTGTAATTTTTATATCACCAAAATTGACTTTAATGATTTTTAAATTTTCAAAATTTCAAAATTAATTTAACCAATCTCACAGTCAATCCCAAACATATCTCAAGATTTTCCCACGATCATTTTTAACCAGTCTCTATTTAATTAATAATCCATCAAAACAAATGGATCTTATTATTAATTTTTTTTATTTAAAAAATAAAAAAATAAAAAATAAAAAATAAAAAATAAGTGGGGGTGGTGTTTGGTCCCTTCTCTTCTAGTTTCTACTACGAATCTGCATTCTTTGGGTTCAAAACTTCATTGATGCAGTAGAAAAAACCATAGCAAGTTCCACAGAGAAGAAGAGATCAGAGTTTTTTCGTAGAATTTCTTCCGAAGCAGGTAGGTTTTTCTTCGGATTTTCTAGCTTTTGCGGTTCTTCAATCTTCTCCATTATCATTACCCTCTTGAGGATTTCCAATCGAAACACCATACCACACACAAGTTTACCGATTAAAACCCCATCCGCATACATTGATCCTTCGGTTCAATTTCTTTTTGGTTACCCATTTCCGCCTTTTTTCTTCATCTCTTGGTTTCTGCTCTGTCCAGATCTTGCTTAGATTCGAGATAGGTAACTTGTTATTGTGGTTATGCATATGCTAATGTTAGGACTTAATATGATGAAATGGGCAATCGGAGTCTTGATATCTATGGAATTTCATAGTGTAGGTTGAAAAATCTGAATTTTAGTCGTCCCTCCGAGCTAAGTGCAGAGGTGTAGGCTAGAAAACTATGGTTGGGAGTTCTTAGACCGTGAACTAAGCCACATTGATGTTTGTCAATATGATATCTTAGTCGTTAGTTTTCTTTTGGTTATGTGATTCTAAGAGCCTCTTCAGAATAATAGGTTTTGGGTATTACTCTCCCCTAGGCTAGTAAATATGGCTTTGTACATTTTGGCAAGATGCTCATTGATCCACTGCATATCTGTCTTTGAACTGTCAAACCTTGATTTGGTTGAAATTGTTCCTTGGAGCATCTTCAGGTATTAGAAACGTAGGTATTGAAATTGAAATTTGTAATCTTCAGTGTTAAAGAAATTTTGTATCCATGAGTTTCACCAAAATTTTGTGTGTAAAGGTGTGGGATTGAACATTATTACCCCTGAGGAGTTTTCAATGTTTGAAGAAGAGCTTTCCTCCATGATACAAGAAACTTCGACAACTTAGCTCCATGTGGAAAAGTTGATGTTGAGACCATGTTCGGAGTCTGATGTTTTGATAACATCTTAGGGTTTAAGAAGAGGAAAGAATGTATTACTGATTAATTACAATTACCATGAATTCACACAGGCCCTAACAAACTTTAAGAAAATGATAACACTAATTCATAATGGAGTGGAGTCCCAATTTTCATGCTTTTGTGAGAACTGAGAAGCAAAATATTGTCTCTCTTTGCAAGTTATTAAACCATTTCCTGATTTTTGACCACGATATATGCTTCTGGTGATAGGTCAGTATGGCTACTATAAAGAACCTGAAGATTAAGACAGCAACCTGCAAACGAATTATCAAGGAGTTGCATTCTTATGAGAAGGAGGTTGAGAGAGAAGCTGCTAAAACAGCTGACATGAAAGAAAAAGGGGCTGACCCTTATGACCTTAAACAACAGGTATGTAAAGGGGTTGCATTCTTAAAAATCAAAAGTCTGTATGATTATTGTCTGCTTGACTGCTTGTGGATTTGTTTGTGCCATCTGTGAATATCTTAAAAGAGGACTTCTTACACATTCAAAACCTTGTGATAGACAGAAATTTCCAACATCACACAATATGAACAATAGAATTTGTGAGCGTGAAGATAAGTGTTTTCACCTATAAAGAAGAATAATGGTCTCGAATTTGGAGCCTAGAGATGGTTTTCAGGGTAGGACTTTTGTAATTGTTTTTGGCCTCTTAACTTTCTCATTTTTTGATAAGAACGACAACTTTTATTGAGATAGAAATGAAAGAATACACGGGCATACTAAAAGGCCAACCCTCAAAAAAGGGACTCCAGCCATACAAAATAGAACCTACAAGATAATTACAAAAGGACTTCGAAATCGAAGCTTGGAGTAAGCATGAAATCTAACAAGGGACCAAGGAATAAACATCACTTGGATCCTTGTCCAACCCTCTAAACAAATGGTTTCTGCTCCTCCATAGATCTCACAAAATAGCACACACCCCAGCAAGTCAAAGAAACCAACCCTTCTTGCGAAAGGGCGGATGGAGAAGGAACTCCCCAATCACATCATAGATCTTCCTAGGCCACGCAAGCGAGAAACCAAATGGCCTTTTACTTTCTCATTGCTGTTAAACTTTATTTTCTTAAAGGTATAAAATCAAAAGGACCAACTAAAATGTTATTTCGGGTAATGGAGGTTGAATGTAATTGCCATCAGCATATGAATCTTCTTTTTCATTTGGTTTACGCAGTATATGATTTATAGTTTTAGCATTGTCATTGTAAGCAGGAAAATGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTCTGGAGTCCGCATTAGCTGATCTGAAAGGAGCACTGGTATTAATGATCATTACCTTTGCTTTTCATCCTTCCCTTTCTTGCTCTTCTGAAGAGCTTGATTCTTGAAGGTTCTCTGCATGTGCCCGGTTTTTGTAAGTAAACTAAAACAAACCTTTTTCATCTTCTTCATCTCCAGGCTGAACTGGAAGAATCAACACAAGAGAAAGGCCAGGAGTTCGACGACGCTCGAAGTACAATCACCGAGATCGAAAGTTTCCTAAAGACAACAGAGGAATAG

mRNA sequence

GAAATGAGGTGAGAATGGAAACAAACCATAGAGTAAGGCAGATAGACAATCCTTTGAAGGAGAAGCCATTGGAGGCCATAGCCAAGAAACCCCATGGAAGCAGCCATGAACATCACCACCCACAAAGGAAAATATAAGAGAGCGACGCCAGAGCACCACCCGAAGGCCTTGCCAAGGTCGGAAGCCACCGCCAGATAGTTGAGCTCCACCTGCGACATCCCCAGAGCCGCCTTCAGATCGGAAGAATAAGAGGGGAAATCAAAATTTGTGCCTGCAAATGCCTGAATCCATATTGCCGCCACCAGCACCACCCATTGTCCAGGTTGGTTCAGCATCCTTTTCTGTTTTTTGATTGGAAGAAGGGGAATTTGTGGAGCTTTTCTCTGCTTTATTTTCATGGCGGAGGCCTGGGGAGAATAATGATTGAAAAAAGCGTTAGGGGAATGGTTGGGTCGGTAGGCCATACCAGAAGGGTGGGTAAGAAAGTGGTTGGATCCAACGATGGTTGATGACTGATGTAACCAAAATTGTCCTTTTCTTTGAATGCATAGCTTCAAATATGCCAAAATTAGCGTAGAACGTAATTCCATCAGTTTTTGTTTCATGTTATTGTTACCAACTATTTGGGAAGTTTCTCAAAATTTATCTTCACAGCATTACCAGGTCAGTATGGCTACTATAAAGAACCTGAAGATTAAGACAGCAACCTGCAAACGAATTATCAAGGAGTTGCATTCTTATGAGAAGGAGGTTGAGAGAGAAGCTGCTAAAACAGCTGACATGAAAGAAAAAGGGGCTGACCCTTATGACCTTAAACAACAGGAAAATGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTCTGGAGTCCGCATTAGCTGATCTGAAAGGAGCACTGGCTGAACTGGAAGAATCAACACAAGAGAAAGGCCAGGAGTTCGACGACGCTCGAAGTACAATCACCGAGATCGAAAGTTTCCTAAAGACAACAGAGGAATAG

Coding sequence (CDS)

ATGCATAGCTTCAAATATGCCAAAATTAGCGTAGAACGTAATTCCATCAGTTTTTGTTTCATGTTATTGTTACCAACTATTTGGGAAGTTTCTCAAAATTTATCTTCACAGCATTACCAGGTCAGTATGGCTACTATAAAGAACCTGAAGATTAAGACAGCAACCTGCAAACGAATTATCAAGGAGTTGCATTCTTATGAGAAGGAGGTTGAGAGAGAAGCTGCTAAAACAGCTGACATGAAAGAAAAAGGGGCTGACCCTTATGACCTTAAACAACAGGAAAATGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTCTGGAGTCCGCATTAGCTGATCTGAAAGGAGCACTGGCTGAACTGGAAGAATCAACACAAGAGAAAGGCCAGGAGTTCGACGACGCTCGAAGTACAATCACCGAGATCGAAAGTTTCCTAAAGACAACAGAGGAATAG

Protein sequence

MHSFKYAKISVERNSISFCFMLLLPTIWEVSQNLSSQHYQVSMATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE
Homology
[Close]
BLAST of CmUC06G108710 vs. NCBI nr
Match: XP_022155762.1 (tubulin-folding cofactor A [Momordica charantia])

HSP 1 Score: 201.1 bits (510), Expect = 7.2e-48
Identity = 103/113 (91.15%), Postives = 112/113 (99.12%), Query Frame = 0 

Query: 43  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 102
           MAT++NLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 103 MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE 156
           M+PDCHKRLE++LADLKGALAELEESTQEKG EFD+ARSTI+E+E+FLKTTEE
Sbjct: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEE 113

[Close]
BLAST of CmUC06G108710 vs. NCBI nr
Match: XP_038907024.1 (tubulin-folding cofactor A [Benincasa hispida])

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-47
Identity = 106/113 (93.81%), Postives = 110/113 (97.35%), Query Frame = 0 

Query: 43  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 102
           MAT+KNLKIKTATCKRIIKELHSYEKEVE EAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEIEAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 103 MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE 156
           MVPDCHKRLESAL DLKGALAELE+STQEKG EF+DARSTITEIESFL+TTEE
Sbjct: 61  MVPDCHKRLESALVDLKGALAELEKSTQEKGPEFNDARSTITEIESFLQTTEE 113

[Close]
BLAST of CmUC06G108710 vs. NCBI nr
Match: XP_023006149.1 (tubulin-folding cofactor A [Cucurbita maxima] >XP_023006150.1 tubulin-folding cofactor A [Cucurbita maxima] >XP_023006151.1 tubulin-folding cofactor A [Cucurbita maxima] >XP_023006152.1 tubulin-folding cofactor A [Cucurbita maxima])

HSP 1 Score: 199.5 bits (506), Expect = 2.1e-47
Identity = 106/113 (93.81%), Postives = 108/113 (95.58%), Query Frame = 0 

Query: 43  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 102
           MAT+KNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 103 MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE 156
           MVPDCHKRLESALADLKG L ELE+STQ KG EFDDARS ITEIESFLKTTEE
Sbjct: 61  MVPDCHKRLESALADLKGTLDELEKSTQVKGPEFDDARSIITEIESFLKTTEE 113

[Close]
BLAST of CmUC06G108710 vs. NCBI nr
Match: XP_023548059.1 (tubulin-folding cofactor A [Cucurbita pepo subsp. pepo] >XP_023548060.1 tubulin-folding cofactor A [Cucurbita pepo subsp. pepo] >XP_023548061.1 tubulin-folding cofactor A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.4 bits (503), Expect = 4.7e-47
Identity = 105/113 (92.92%), Postives = 108/113 (95.58%), Query Frame = 0 

Query: 43  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 102
           MAT+KNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 103 MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE 156
           MVPDCHKRLESALADLKG L ELE+STQ +G EFDDARS ITEIESFLKTTEE
Sbjct: 61  MVPDCHKRLESALADLKGTLDELEKSTQVRGPEFDDARSIITEIESFLKTTEE 113

[Close]
BLAST of CmUC06G108710 vs. NCBI nr
Match: XP_022959143.1 (tubulin-folding cofactor A [Cucurbita moschata] >XP_022959144.1 tubulin-folding cofactor A [Cucurbita moschata] >XP_022959145.1 tubulin-folding cofactor A [Cucurbita moschata] >XP_022959146.1 tubulin-folding cofactor A [Cucurbita moschata])

HSP 1 Score: 196.8 bits (499), Expect = 1.4e-46
Identity = 104/113 (92.04%), Postives = 108/113 (95.58%), Query Frame = 0 

Query: 43  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 102
           MAT+KNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 103 MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE 156
           MVPDCHKRLE+ALADLKG L ELE+STQ KG EF+DARS ITEIESFLKTTEE
Sbjct: 61  MVPDCHKRLEAALADLKGTLDELEKSTQVKGPEFEDARSIITEIESFLKTTEE 113

[Close]
BLAST of CmUC06G108710 vs. ExPASy Swiss-Prot
Match: O04350 (Tubulin-folding cofactor A OS=Arabidopsis thaliana OX=3702 GN=TFCA PE=1 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 5.2e-41
Identity = 84/112 (75.00%), Postives = 99/112 (88.39%), Query Frame = 0 

Query: 43  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 102
           MATI+NLKIKT+TCKRI+KELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRM
Sbjct: 1   MATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRM 60

Query: 103 MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTE 155
           M+PDCHKRLESALADLK  LAELEE+ +++G E +DA+ T+ ++E    T +
Sbjct: 61  MIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVADVEKQFPTED 112

[Close]
BLAST of CmUC06G108710 vs. ExPASy Swiss-Prot
Match: P80585 (Tubulin-specific chaperone A OS=Gallus gallus OX=9031 GN=TBCA PE=1 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 7.8e-13
Identity = 42/102 (41.18%), Postives = 62/102 (60.78%), Query Frame = 0 

Query: 46  IKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVP 105
           ++ +KIKT   KR+ KE   YEKE +++  K   MK +  D Y +K+Q  +L ESRMM+P
Sbjct: 6   LRQIKIKTGVVKRLAKEKVMYEKEAKQQEEKIEKMKAEACDDYGIKKQAEILQESRMMIP 65

Query: 106 DCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIE 148
           DC +RLE A ADL   L    E   E+ +E+ +ARS +  ++
Sbjct: 66  DCQRRLEIAHADLTQLLE--NEKELEEAEEYKEARSILESVK 105

[Close]
BLAST of CmUC06G108710 vs. ExPASy Swiss-Prot
Match: O75347 (Tubulin-specific chaperone A OS=Homo sapiens OX=9606 GN=TBCA PE=1 SV=3)

HSP 1 Score: 75.1 bits (183), Expect = 7.8e-13
Identity = 39/102 (38.24%), Postives = 64/102 (62.75%), Query Frame = 0 

Query: 46  IKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVP 105
           ++ +KIKT   KR++KE   YEKE +++  K   M+ +  + YD+K+Q  +L ESRMM+P
Sbjct: 6   VRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIP 65

Query: 106 DCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIE 148
           DC +RLE+A  DL+  L    E   E+ +E+ +AR  +  ++
Sbjct: 66  DCQRRLEAAYLDLQRILE--NEKDLEEAEEYKEARLVLDSVK 105

[Close]
BLAST of CmUC06G108710 vs. ExPASy Swiss-Prot
Match: Q6PEC1 (Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12
Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = 0 

Query: 46  IKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVP 105
           ++ +KIKT   KR++KE   YEKE +++  K   MK +  + Y +K+Q  +L ESRMM+P
Sbjct: 6   VRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMKAEDGENYAIKKQAEILQESRMMIP 65

Query: 106 DCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIE 148
           DC +RLE+A  DL+  L    E   E+ +E+ +AR  +  ++
Sbjct: 66  DCQRRLEAAYTDLRQILE--SEKDLEEAEEYKEARIVLDSVK 105

[Close]
BLAST of CmUC06G108710 vs. ExPASy Swiss-Prot
Match: P48428 (Tubulin-specific chaperone A OS=Mus musculus OX=10090 GN=Tbca PE=1 SV=3)

HSP 1 Score: 72.4 bits (176), Expect = 5.1e-12
Identity = 38/102 (37.25%), Postives = 63/102 (61.76%), Query Frame = 0 

Query: 46  IKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVP 105
           ++ +KIKT   +R++KE   YEKE +++  K   MK +  + Y +K+Q  +L ESRMM+P
Sbjct: 6   VRQIKIKTGVVRRLVKERVMYEKEAKQQEEKIEKMKAEDGENYAIKKQAEILQESRMMIP 65

Query: 106 DCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIE 148
           DC +RLE+A  DL+  L    E   E+ +E+ +AR  +  ++
Sbjct: 66  DCQRRLEAAYTDLQQILE--SEKDLEEAEEYKEARVVLDSVK 105

[Close]
BLAST of CmUC06G108710 vs. ExPASy TrEMBL
Match: A0A6J1DQ83 (Tubulin-specific chaperone A OS=Momordica charantia OX=3673 GN=LOC111022807 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 3.5e-48
Identity = 103/113 (91.15%), Postives = 112/113 (99.12%), Query Frame = 0 

Query: 43  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 102
           MAT++NLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 103 MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE 156
           M+PDCHKRLE++LADLKGALAELEESTQEKG EFD+ARSTI+E+E+FLKTTEE
Sbjct: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEE 113

[Close]
BLAST of CmUC06G108710 vs. ExPASy TrEMBL
Match: A0A6J1KV46 (Tubulin-specific chaperone A OS=Cucurbita maxima OX=3661 GN=LOC111498976 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.0e-47
Identity = 106/113 (93.81%), Postives = 108/113 (95.58%), Query Frame = 0 

Query: 43  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 102
           MAT+KNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 103 MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE 156
           MVPDCHKRLESALADLKG L ELE+STQ KG EFDDARS ITEIESFLKTTEE
Sbjct: 61  MVPDCHKRLESALADLKGTLDELEKSTQVKGPEFDDARSIITEIESFLKTTEE 113

[Close]
BLAST of CmUC06G108710 vs. ExPASy TrEMBL
Match: A0A6J1H416 (Tubulin-specific chaperone A OS=Cucurbita moschata OX=3662 GN=LOC111460224 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 6.6e-47
Identity = 104/113 (92.04%), Postives = 108/113 (95.58%), Query Frame = 0 

Query: 43  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 102
           MAT+KNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 103 MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE 156
           MVPDCHKRLE+ALADLKG L ELE+STQ KG EF+DARS ITEIESFLKTTEE
Sbjct: 61  MVPDCHKRLEAALADLKGTLDELEKSTQVKGPEFEDARSIITEIESFLKTTEE 113

[Close]
BLAST of CmUC06G108710 vs. ExPASy TrEMBL
Match: A0A5D3DLX2 (Tubulin-specific chaperone A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00640 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.8e-45
Identity = 101/115 (87.83%), Postives = 108/115 (93.91%), Query Frame = 0 

Query: 41  VSMATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAES 100
           + MAT+KNLKIKTATCKRI+KEL SYEKEVEREA+KTADMKEKGADPYDLKQQENVLAES
Sbjct: 126 LGMATVKNLKIKTATCKRILKELFSYEKEVEREASKTADMKEKGADPYDLKQQENVLAES 185

Query: 101 RMMVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE 156
           RMMVPDCHKRLE ALADLK ALAELE+ST+EKG EFDDARSTI +IESFLK TEE
Sbjct: 186 RMMVPDCHKRLEVALADLKEALAELEKSTEEKGPEFDDARSTINDIESFLKPTEE 240

[Close]
BLAST of CmUC06G108710 vs. ExPASy TrEMBL
Match: A0A0A0KER0 (Tubulin-specific chaperone A OS=Cucumis sativus OX=3659 GN=Csa_6G078610 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.8e-45
Identity = 101/115 (87.83%), Postives = 107/115 (93.04%), Query Frame = 0 

Query: 41  VSMATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAES 100
           + MAT+KNLKIKTATCKRI+KEL SYEKEVEREAAKTADMKEKGADPYDLKQQENVLAES
Sbjct: 127 LGMATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAES 186

Query: 101 RMMVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTEE 156
           RMMVPDCHKRLE ALADLK ALAELE+STQEKG EFDDARSTI ++ESFLK  EE
Sbjct: 187 RMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARSTINDVESFLKPIEE 241

[Close]
BLAST of CmUC06G108710 vs. TAIR 10
Match: AT2G30410.1 (tubulin folding cofactor A (KIESEL) )

HSP 1 Score: 168.7 bits (426), Expect = 3.7e-42
Identity = 84/112 (75.00%), Postives = 99/112 (88.39%), Query Frame = 0 

Query: 43  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 102
           MATI+NLKIKT+TCKRI+KELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRM
Sbjct: 1   MATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRM 60

Query: 103 MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTE 155
           M+PDCHKRLESALADLK  LAELEE+ +++G E +DA+ T+ ++E    T +
Sbjct: 61  MIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVADVEKQFPTED 112

[Close]
BLAST of CmUC06G108710 vs. TAIR 10
Match: AT2G30410.2 (tubulin folding cofactor A (KIESEL) )

HSP 1 Score: 168.7 bits (426), Expect = 3.7e-42
Identity = 84/112 (75.00%), Postives = 99/112 (88.39%), Query Frame = 0 

Query: 43  MATIKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 102
           MATI+NLKIKT+TCKRI+KELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRM
Sbjct: 1   MATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRM 60

Query: 103 MVPDCHKRLESALADLKGALAELEESTQEKGQEFDDARSTITEIESFLKTTE 155
           M+PDCHKRLESALADLK  LAELEE+ +++G E +DA+ T+ ++E    T +
Sbjct: 61  MIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVADVEKQFPTED 112

The following BLAST results are available for this feature:
BLAST of CmUC06G108710 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022155762.17.2e-4891.15tubulin-folding cofactor A [Momordica charantia][more]
XP_038907024.11.2e-4793.81tubulin-folding cofactor A [Benincasa hispida][more]
XP_023006149.12.1e-4793.81tubulin-folding cofactor A [Cucurbita maxima] >XP_023006150.1 tubulin-folding co... [more]
XP_023548059.14.7e-4792.92tubulin-folding cofactor A [Cucurbita pepo subsp. pepo] >XP_023548060.1 tubulin-... [more]
XP_022959143.11.4e-4692.04tubulin-folding cofactor A [Cucurbita moschata] >XP_022959144.1 tubulin-folding ... [more]
BLAST of CmUC06G108710 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O043505.2e-4175.00Tubulin-folding cofactor A OS=Arabidopsis thaliana OX=3702 GN=TFCA PE=1 SV=2[more]
P805857.8e-1341.18Tubulin-specific chaperone A OS=Gallus gallus OX=9031 GN=TBCA PE=1 SV=2[more]
O753477.8e-1338.24Tubulin-specific chaperone A OS=Homo sapiens OX=9606 GN=TBCA PE=1 SV=3[more]
Q6PEC11.7e-1238.24Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1[more]
P484285.1e-1237.25Tubulin-specific chaperone A OS=Mus musculus OX=10090 GN=Tbca PE=1 SV=3[more]
BLAST of CmUC06G108710 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DQ833.5e-4891.15Tubulin-specific chaperone A OS=Momordica charantia OX=3673 GN=LOC111022807 PE=3... [more]
A0A6J1KV461.0e-4793.81Tubulin-specific chaperone A OS=Cucurbita maxima OX=3661 GN=LOC111498976 PE=3 SV... [more]
A0A6J1H4166.6e-4792.04Tubulin-specific chaperone A OS=Cucurbita moschata OX=3662 GN=LOC111460224 PE=3 ... [more]
A0A5D3DLX22.8e-4587.83Tubulin-specific chaperone A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A0A0KER02.8e-4587.83Tubulin-specific chaperone A OS=Cucumis sativus OX=3659 GN=Csa_6G078610 PE=3 SV=... [more]
BLAST of CmUC06G108710 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G30410.13.7e-4275.00tubulin folding cofactor A (KIESEL) [more]
AT2G30410.23.7e-4275.00tubulin folding cofactor A (KIESEL) [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 108..135
NoneNo IPR availableCOILSCoilCoilcoord: 56..83
NoneNo IPR availableGENE3D1.20.58.90coord: 40..155
e-value: 3.3E-41
score: 142.0
NoneNo IPR availablePANTHERPTHR21500:SF4TUBULIN-SPECIFIC CHAPERONE Acoord: 43..155
IPR004226Tubulin binding cofactor APFAMPF02970TBCAcoord: 49..129
e-value: 5.2E-27
score: 94.0
IPR004226Tubulin binding cofactor APANTHERPTHR21500TUBULIN-SPECIFIC CHAPERONE Acoord: 43..155
IPR036126Tubulin binding cofactor A superfamilySUPERFAMILY46988Tubulin chaperone cofactor Acoord: 45..146

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC06G108710.1CmUC06G108710.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007023 post-chaperonin tubulin folding pathway
biological_process GO:0007021 tubulin complex assembly
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005874 microtubule
molecular_function GO:0048487 beta-tubulin binding