CmUC05G108000 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC05G108000
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	auxin-regulated gene involved in organ size
Location	CmU531Chr05: 35892630 .. 35893585 (-)
RNA-Seq Expression	CmUC05G108000
Synteny	CmUC05G108000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATAAAGGTTGGAAAATACATGAACCAAAACGAGTGTAAATGTAGATATGTGTCGATGGCATTGAAGCCTAAAACTTAATTAGGTATAAAGAAGATTTAACTTTTTTTTGCTAAAAAATGTAATTTTTCCCATTAATACGAAAGTTAAAAATTAAAAAAAGGAGAGAAAAGAAAACACGCATCTGTGGGTCCCATAGGGTAGAAAATCAAACGGTGGTGATTCATTTCATCGTCACACAAAAACGGGTCTATAGATGCATGCACCCACTGACCTCAAAAAAATGCTTTTTCCATTTATTTAATTTATTTATGATTACAAATATTATTTTCGATTCATTTTAGGCTCAATACCTTCCAAAAAAATATTTTTAAATCGGTCTTTGTATTTTTTAATAAAATCTTAAATCTAGTTATTCAAATTTTAACTTTTTCGAAATTGATTAAATAATAATGAAGATATTTAGATGAAAAAAAGATACTATGTAAGTATATTTTTACCGTTTAGAAAGGAGAAGATTAAAAAAAATTAAAATTAAGTAATTAAAAGTAAATGGACCAATATGAAATAAAACGTAAAGTAGAGGGACAAAATGTTATTGTGTTGTTTTAATAAAGCTATATAAACCCCCACCCCTAATTTTTCCGCCTCCGTCAACTTCGATCCAAAATTGCCACCGTCGTCACCGGATTCTTTTCACACGCATTCCCGCCGCTGAAGGACATGATCCAATCTCCGGCTGCCAGAAAATTGCTATGGTACGTTGCTTCAACTTAGTGTCCGTTTTCGTCCTCGCCGCCGTTGCGGTTTCCATGGTCGTTCTGCCCTTGGTTCTTCCGCCGCTGCCTCCGCCACCGCTTGTGTTTCTCTTCTTTCCGGTTGGAATCATGGCGGCGCTTCTTCTCCTCGCTTTTTCCCCCTCCGATGTCGGCGCCGGGAACGTCTTTGTATGA

mRNA sequence

ATGGAAATAAAGCTATATAAACCCCCACCCCTAATTTTTCCGCCTCCGTCAACTTCGATCCAAAATTGCCACCGTCGTCACCGGATTCTTTTCACACGCATTCCCGCCGCTGAAGGACATGATCCAATCTCCGGCTGCCAGAAAATTGCTATGGTACGTTGCTTCAACTTAGTGTCCGTTTTCGTCCTCGCCGCCGTTGCGGTTTCCATGGTCGTTCTGCCCTTGGTTCTTCCGCCGCTGCCTCCGCCACCGCTTGTGTTTCTCTTCTTTCCGGTTGGAATCATGGCGGCGCTTCTTCTCCTCGCTTTTTCCCCCTCCGATGTCGGCGCCGGGAACGTCTTTGTATGA

Coding sequence (CDS)

ATGGAAATAAAGCTATATAAACCCCCACCCCTAATTTTTCCGCCTCCGTCAACTTCGATCCAAAATTGCCACCGTCGTCACCGGATTCTTTTCACACGCATTCCCGCCGCTGAAGGACATGATCCAATCTCCGGCTGCCAGAAAATTGCTATGGTACGTTGCTTCAACTTAGTGTCCGTTTTCGTCCTCGCCGCCGTTGCGGTTTCCATGGTCGTTCTGCCCTTGGTTCTTCCGCCGCTGCCTCCGCCACCGCTTGTGTTTCTCTTCTTTCCGGTTGGAATCATGGCGGCGCTTCTTCTCCTCGCTTTTTCCCCCTCCGATGTCGGCGCCGGGAACGTCTTTGTATGA

Protein sequence

MEIKLYKPPPLIFPPPSTSIQNCHRRHRILFTRIPAAEGHDPISGCQKIAMVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGNVFV

Homology

[Close]

BLAST of CmUC05G108000 vs. NCBI nr
Match: KAG6601123.1 (Transcription factor IIIA, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 131.0 bits (328), Expect = 6.8e-27
Identity = 75/101 (74.26%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 12  IFPPPSTSIQNCHRRHRILFTRIPAAEGHDPISGCQKIAMVRCFNLVSVFVLAAVAVSMV 71
           I PP    IQN  R HRIL     AA+GHD IS  +KIAMVRCFNLVS+FVLAAVAVSMV
Sbjct: 283 ITPPKFQKIQN-RRLHRILVALNAAAQGHDTISCRRKIAMVRCFNLVSIFVLAAVAVSMV 342

Query: 72  VLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGN 113
           VL LVLPPLPPPP+V LFFPVG+MAALL+LAFSPSDVG  N
Sbjct: 343 VLRLVLPPLPPPPIVLLFFPVGLMAALLILAFSPSDVGVDN 382

[Close]

BLAST of CmUC05G108000 vs. NCBI nr
Match: KAG2372512.1 (uncharacterized protein HKW66_Vig0206190 [Vigna angularis] >KOM42438.1 hypothetical protein LR48_Vigan05g004200 [Vigna angularis] >BAT93370.1 hypothetical protein VIGAN_07232000 [Vigna angularis var. angularis])

HSP 1 Score: 92.0 bits (227), Expect = 3.5e-15
Identity = 64/114 (56.14%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 14  PPPSTSIQNCH----RRHRILFTRIPAAEG----HD-----PISGCQKIAMVRCFNLVSV 73
           P  S S Q+ H    R H +  T +  + G    HD      I    K  MVRCF+L SV
Sbjct: 51  PKVSVSEQHIHSQRFREHTLSETTLLPSRGVGEEHDRRENNNIIVSSKNNMVRCFSLGSV 110

Query: 74  FVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGNVF 115
            +LAA+A SMVVLPL+LPPLPPPPLV LFFPVGIMAAL+LLAFSPSD G G V+
Sbjct: 111 LILAALAASMVVLPLMLPPLPPPPLVLLFFPVGIMAALMLLAFSPSD-GNGVVY 163

[Close]

BLAST of CmUC05G108000 vs. NCBI nr
Match: XP_007148923.1 (hypothetical protein PHAVU_005G025500g [Phaseolus vulgaris] >ESW20917.1 hypothetical protein PHAVU_005G025500g [Phaseolus vulgaris])

HSP 1 Score: 89.0 bits (219), Expect = 3.0e-14
Identity = 51/64 (79.69%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 51  MVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGA 110
           MVRCF+L SV +LAA+A SMVVLPL+LPPLPPPPLV LFFPVGIMAAL+LLAFSPSD G 
Sbjct: 1   MVRCFSLGSVLILAALAASMVVLPLMLPPLPPPPLVLLFFPVGIMAALMLLAFSPSD-GH 60

Query: 111 GNVF 115
           G V+
Sbjct: 61  GVVY 63

[Close]

BLAST of CmUC05G108000 vs. NCBI nr
Match: KAF5742459.1 (putative transmembrane protein [Tripterygium wilfordii])

HSP 1 Score: 89.0 bits (219), Expect = 3.0e-14
Identity = 48/65 (73.85%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 51  MVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGA 110
           MVRCF++ SV VLAAVA SMVVLPL+LPPLPPPPL+ LFFPVGIM AL+ LAFSP ++  
Sbjct: 1   MVRCFSIGSVIVLAAVAASMVVLPLILPPLPPPPLMLLFFPVGIMVALVFLAFSPDEITR 60

Query: 111 GNVFV 116
           GNV V
Sbjct: 61  GNVVV 65

[Close]

BLAST of CmUC05G108000 vs. NCBI nr
Match: RZC16429.1 (hypothetical protein D0Y65_009620 [Glycine soja])

HSP 1 Score: 88.2 bits (217), Expect = 5.0e-14
Identity = 53/108 (49.07%), Postives = 69/108 (63.89%), Query Frame = 0


Query: 5   LYKPPPLIFPPPSTSIQNCHRRHRILFTRI-----PAAEGHDPISGCQKIAMVRCFNLVS 64
           ++  P  ++ P +  +    R+H ++  ++         G + +     I M RCF L S
Sbjct: 1   MHHAPRQLYIPSNAILPLFFRKHALVEVKLRFYPSSGGAGEEHVRRKIIIDMARCFGLGS 60

Query: 65  VFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSD 108
           V VLAA+A SMVVLPL+LPPLPPPPLV LFFPVGIMAAL+LL FSPSD
Sbjct: 61  VLVLAALAASMVVLPLMLPPLPPPPLVLLFFPVGIMAALMLLVFSPSD 108

[Close]

BLAST of CmUC05G108000 vs. ExPASy Swiss-Prot
Match: Q6NMD6 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana OX=3702 GN=ARGOS PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 55  FNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGNVF 114
           F+L S+F+L  +  S+++LPLVLPPLPPPP + L  P+GIM  L++LAF PS     N  
Sbjct: 65  FSLESLFLLVGLTASLLILPLVLPPLPPPPFMLLLVPIGIMVLLVVLAFMPSSHSNANTD 124

Query: 115 V 116
           V
Sbjct: 125 V 125

[Close]

BLAST of CmUC05G108000 vs. ExPASy Swiss-Prot
Match: C7SFP6 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. pekinensis OX=51351 GN=ARGOS PE=2 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07
Identity = 37/95 (38.95%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 14  PPPSTSIQNCHRRHRILFTRIPAAEGHDPISGCQKIAMV--RCFNLVSVFVLAAVAVSMV 73
           PPP+ + +N     R  F+              QK  M+    F+L S+ +L  +  S++
Sbjct: 42  PPPAMTSENSKHELRRTFS-------------SQKRLMIPANYFSLESLVILVGLTASLL 101

Query: 74  VLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPS 107
           +LPLVLPPLPPPP + L  P+GIM  L++LAF PS
Sbjct: 102 ILPLVLPPLPPPPFMLLLVPIGIMVLLIILAFMPS 123

[Close]

BLAST of CmUC05G108000 vs. ExPASy Swiss-Prot
Match: Q8RXL7 (ARGOS-like protein OS=Arabidopsis thaliana OX=3702 GN=ARL PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 4.7e-07
Identity = 28/52 (53.85%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 55  FNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPS 107
           F+L S+ VL  +  S+++LPL+LPPLPPPP + L  P+GIM  L++LAF PS
Sbjct: 71  FSLESMVVLVGLTASLLILPLILPPLPPPPFMLLLIPIGIMVLLMVLAFMPS 122

[Close]

BLAST of CmUC05G108000 vs. ExPASy Swiss-Prot
Match: Q7X6L2 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Oryza sativa subsp. japonica OX=39947 GN=ARGOS PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.6e-05
Identity = 26/58 (44.83%), Postives = 39/58 (67.24%), Query Frame = 0


Query: 55  FNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGN 113
           F++ S+ +L  V  S+V+LPLVLPPLPPPP + +  PV ++  LL LAF P+   + +
Sbjct: 100 FSVESLLLLVCVTASLVILPLVLPPLPPPPSMLMLVPVAMLVLLLALAFMPTTTSSSS 157

[Close]

BLAST of CmUC05G108000 vs. ExPASy TrEMBL
Match: A0A0L9UI81 (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g004200 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.7e-15
Identity = 64/114 (56.14%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 14  PPPSTSIQNCH----RRHRILFTRIPAAEG----HD-----PISGCQKIAMVRCFNLVSV 73
           P  S S Q+ H    R H +  T +  + G    HD      I    K  MVRCF+L SV
Sbjct: 51  PKVSVSEQHIHSQRFREHTLSETTLLPSRGVGEEHDRRENNNIIVSSKNNMVRCFSLGSV 110

Query: 74  FVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGNVF 115
            +LAA+A SMVVLPL+LPPLPPPPLV LFFPVGIMAAL+LLAFSPSD G G V+
Sbjct: 111 LILAALAASMVVLPLMLPPLPPPPLVLLFFPVGIMAALMLLAFSPSD-GNGVVY 163

[Close]

BLAST of CmUC05G108000 vs. ExPASy TrEMBL
Match: A0A0S3SKI1 (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G232000 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.7e-15
Identity = 64/114 (56.14%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 14  PPPSTSIQNCH----RRHRILFTRIPAAEG----HD-----PISGCQKIAMVRCFNLVSV 73
           P  S S Q+ H    R H +  T +  + G    HD      I    K  MVRCF+L SV
Sbjct: 51  PKVSVSEQHIHSQRFREHTLSETTLLPSRGVGEEHDRRENNNIIVSSKNNMVRCFSLGSV 110

Query: 74  FVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGNVF 115
            +LAA+A SMVVLPL+LPPLPPPPLV LFFPVGIMAAL+LLAFSPSD G G V+
Sbjct: 111 LILAALAASMVVLPLMLPPLPPPPLVLLFFPVGIMAALMLLAFSPSD-GNGVVY 163

[Close]

BLAST of CmUC05G108000 vs. ExPASy TrEMBL
Match: A0A7J7D881 (Putative transmembrane protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW09G00507 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.4e-14
Identity = 48/65 (73.85%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 51  MVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGA 110
           MVRCF++ SV VLAAVA SMVVLPL+LPPLPPPPL+ LFFPVGIM AL+ LAFSP ++  
Sbjct: 1   MVRCFSIGSVIVLAAVAASMVVLPLILPPLPPPPLMLLFFPVGIMVALVFLAFSPDEITR 60

Query: 111 GNVFV 116
           GNV V
Sbjct: 61  GNVVV 65

[Close]

BLAST of CmUC05G108000 vs. ExPASy TrEMBL
Match: V7BSD6 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G025500g PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.4e-14
Identity = 51/64 (79.69%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 51  MVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGA 110
           MVRCF+L SV +LAA+A SMVVLPL+LPPLPPPPLV LFFPVGIMAAL+LLAFSPSD G 
Sbjct: 1   MVRCFSLGSVLILAALAASMVVLPLMLPPLPPPPLVLLFFPVGIMAALMLLAFSPSD-GH 60

Query: 111 GNVF 115
           G V+
Sbjct: 61  GVVY 63

[Close]

BLAST of CmUC05G108000 vs. ExPASy TrEMBL
Match: A0A445KZX5 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_009620 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.4e-14
Identity = 53/108 (49.07%), Postives = 69/108 (63.89%), Query Frame = 0


Query: 5   LYKPPPLIFPPPSTSIQNCHRRHRILFTRI-----PAAEGHDPISGCQKIAMVRCFNLVS 64
           ++  P  ++ P +  +    R+H ++  ++         G + +     I M RCF L S
Sbjct: 1   MHHAPRQLYIPSNAILPLFFRKHALVEVKLRFYPSSGGAGEEHVRRKIIIDMARCFGLGS 60

Query: 65  VFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSD 108
           V VLAA+A SMVVLPL+LPPLPPPPLV LFFPVGIMAAL+LL FSPSD
Sbjct: 61  VLVLAALAASMVVLPLMLPPLPPPPLVLLFFPVGIMAALMLLVFSPSD 108

[Close]

BLAST of CmUC05G108000 vs. TAIR 10
Match: AT3G59900.1 (auxin-regulated gene involved in organ size )

HSP 1 Score: 57.4 bits (137), Expect = 8.9e-09
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 55  FNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGNVF 114
           F+L S+F+L  +  S+++LPLVLPPLPPPP + L  P+GIM  L++LAF PS     N  
Sbjct: 65  FSLESLFLLVGLTASLLILPLVLPPLPPPPFMLLLVPIGIMVLLVVLAFMPSSHSNANTD 124

Query: 115 V 116
           V
Sbjct: 125 V 125

[Close]

BLAST of CmUC05G108000 vs. TAIR 10
Match: AT2G44080.1 (ARGOS-like )

HSP 1 Score: 55.5 bits (132), Expect = 3.4e-08
Identity = 28/52 (53.85%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 55  FNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPS 107
           F+L S+ VL  +  S+++LPL+LPPLPPPP + L  P+GIM  L++LAF PS
Sbjct: 71  FSLESMVVLVGLTASLLILPLILPPLPPPPFMLLLIPIGIMVLLMVLAFMPS 122

[Close]

BLAST of CmUC05G108000 vs. TAIR 10
Match: AT2G41230.1 (unknown protein; Has 75 Blast hits to 75 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 40.8 bits (94), Expect = 8.6e-04
Identity = 23/49 (46.94%), Postives = 34/49 (69.39%), Query Frame = 0


Query: 59  SVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSD 108
           SV +L  +++ +++LP  LPPLPPPP   L  P+ +M  L+ LAFSPS+
Sbjct: 29  SVALLLFLSLLLLILPPFLPPLPPPPATLLLLPLLLMILLIFLAFSPSN 77

The following BLAST results are available for this feature:

BLAST of CmUC05G108000 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601123.1	6.8e-27	74.26	Transcription factor IIIA, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG2372512.1	3.5e-15	56.14	uncharacterized protein HKW66_Vig0206190 [Vigna angularis] >KOM42438.1 hypotheti...	[more]
XP_007148923.1	3.0e-14	79.69	hypothetical protein PHAVU_005G025500g [Phaseolus vulgaris] >ESW20917.1 hypothet...	[more]
KAF5742459.1	3.0e-14	73.85	putative transmembrane protein [Tripterygium wilfordii]	[more]
RZC16429.1	5.0e-14	49.07	hypothetical protein D0Y65_009620 [Glycine soja]	[more]

BLAST of CmUC05G108000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NMD6	1.2e-07	50.82	Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana OX=3...	[more]
C7SFP6	1.2e-07	38.95	Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. peki...	[more]
Q8RXL7	4.7e-07	53.85	ARGOS-like protein OS=Arabidopsis thaliana OX=3702 GN=ARL PE=2 SV=1	[more]
Q7X6L2	2.6e-05	44.83	Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Oryza sativa subsp. japon...	[more]

BLAST of CmUC05G108000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0L9UI81	1.7e-15	56.14	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g004200 PE...	[more]
A0A0S3SKI1	1.7e-15	56.14	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G...	[more]
A0A7J7D881	1.4e-14	73.85	Putative transmembrane protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW09...	[more]
V7BSD6	1.4e-14	79.69	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G025500g PE=4 ...	[more]
A0A445KZX5	2.4e-14	49.07	Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_009620 PE=4 SV=1	[more]

BLAST of CmUC05G108000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59900.1	8.9e-09	50.82	auxin-regulated gene involved in organ size	[more]
AT2G44080.1	3.4e-08	53.85	ARGOS-like	[more]
AT2G41230.1	8.6e-04	46.94	unknown protein; Has 75 Blast hits to 75 proteins in 8 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR38928	ARGOS7	coord: 51..110
None	No IPR available	PANTHER	PTHR38928:SF5	PROTEIN, PUTATIVE-RELATED	coord: 51..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC05G108000.1	CmUC05G108000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane