CmUC05G106800 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATTTTCAAAGAATTTGCAAGATGATATGGGCTTTGAATTCGACCCCAAAAAATGGGTCATCACTGGAATTCAATTACGACCTCCTCTAATTCCCATTAACACTACAAATCCCATTCACAAAGAACACGATCACTCCGACACTGAAGACCAACCGCCGACGCCGACCGCAGACGACTGTCGGATTCGGTCCGGTTCGAAATGCCCACCCGCCCCGAAGAAGCCAAAGTCTTCACTGAAATTCAACCACGGCAATGTGAGGCAGTTCTTCAAGCCTCCGGATTTAGAGGTTGTTTTTAGTCGACATGTCGAGAGGGCTAATTGA ATGGGATTTTCAAAGAATTTGCAAGATGATATGGGCTTTGAATTCGACCCCAAAAAATGGGTCATCACTGGAATTCAATTACGACCTCCTCTAATTCCCATTAACACTACAAATCCCATTCACAAAGAACACGATCACTCCGACACTGAAGACCAACCGCCGACGCCGACCGCAGACGACTGTCGGATTCGGTCCGGTTCGAAATGCCCACCCGCCCCGAAGAAGCCAAAGTCTTCACTGAAATTCAACCACGGCAATGTGAGGCAGTTCTTCAAGCCTCCGGATTTAGAGGTTGTTTTTAGTCGACATGTCGAGAGGGCTAATTGA ATGGGATTTTCAAAGAATTTGCAAGATGATATGGGCTTTGAATTCGACCCCAAAAAATGGGTCATCACTGGAATTCAATTACGACCTCCTCTAATTCCCATTAACACTACAAATCCCATTCACAAAGAACACGATCACTCCGACACTGAAGACCAACCGCCGACGCCGACCGCAGACGACTGTCGGATTCGGTCCGGTTCGAAATGCCCACCCGCCCCGAAGAAGCCAAAGTCTTCACTGAAATTCAACCACGGCAATGTGAGGCAGTTCTTCAAGCCTCCGGATTTAGAGGTTGTTTTTAGTCGACATGTCGAGAGGGCTAATTGA MGFSKNLQDDMGFEFDPKKWVITGIQLRPPLIPINTTNPIHKEHDHSDTEDQPPTPTADDCRIRSGSKCPPAPKKPKSSLKFNHGNVRQFFKPPDLEVVFSRHVERAN Homology
BLAST of CmUC05G106800 vs. NCBI nr
Match: XP_022957284.1 (cyclin-dependent protein kinase inhibitor SMR6-like [Cucurbita moschata]) HSP 1 Score: 196.8 bits (499), Expect = 9.5e-47 Identity = 93/108 (86.11%), Postives = 98/108 (90.74%), Query Frame = 0
BLAST of CmUC05G106800 vs. NCBI nr
Match: KAG6601529.1 (Cyclin-dependent protein kinase inhibitor SMR8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 185.3 bits (469), Expect = 2.8e-43 Identity = 87/98 (88.78%), Postives = 91/98 (92.86%), Query Frame = 0
BLAST of CmUC05G106800 vs. NCBI nr
Match: KAA0034281.1 (hypothetical protein E6C27_scaffold65G002800 [Cucumis melo var. makuwa] >TYK15638.1 hypothetical protein E5676_scaffold35G001350 [Cucumis melo var. makuwa]) HSP 1 Score: 171.8 bits (434), Expect = 3.3e-39 Identity = 81/98 (82.65%), Postives = 87/98 (88.78%), Query Frame = 0
BLAST of CmUC05G106800 vs. NCBI nr
Match: KAE8648709.1 (hypothetical protein Csa_009216 [Cucumis sativus]) HSP 1 Score: 162.9 bits (411), Expect = 1.5e-36 Identity = 77/99 (77.78%), Postives = 84/99 (84.85%), Query Frame = 0
BLAST of CmUC05G106800 vs. NCBI nr
Match: XP_021654851.1 (cyclin-dependent protein kinase inhibitor SMR6-like [Hevea brasiliensis]) HSP 1 Score: 117.9 bits (294), Expect = 5.6e-23 Identity = 63/107 (58.88%), Postives = 71/107 (66.36%), Query Frame = 0
BLAST of CmUC05G106800 vs. ExPASy Swiss-Prot
Match: Q29Q81 (Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 GN=SMR6 PE=1 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.1e-13 Identity = 47/110 (42.73%), Postives = 62/110 (56.36%), Query Frame = 0
BLAST of CmUC05G106800 vs. ExPASy Swiss-Prot
Match: Q1G3Y4 (Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 GN=SMR15 PE=3 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.3e-11 Identity = 48/107 (44.86%), Postives = 61/107 (57.01%), Query Frame = 0
BLAST of CmUC05G106800 vs. ExPASy Swiss-Prot
Match: Q9SAD3 (Cyclin-dependent protein kinase inhibitor SMR8 OS=Arabidopsis thaliana OX=3702 GN=SMR8 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.5e-10 Identity = 49/116 (42.24%), Postives = 63/116 (54.31%), Query Frame = 0
BLAST of CmUC05G106800 vs. ExPASy TrEMBL
Match: A0A6J1H1H9 (cyclin-dependent protein kinase inhibitor SMR6-like OS=Cucurbita moschata OX=3662 GN=LOC111458725 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 4.6e-47 Identity = 93/108 (86.11%), Postives = 98/108 (90.74%), Query Frame = 0
BLAST of CmUC05G106800 vs. ExPASy TrEMBL
Match: A0A5A7SXV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001350 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.6e-39 Identity = 81/98 (82.65%), Postives = 87/98 (88.78%), Query Frame = 0
BLAST of CmUC05G106800 vs. ExPASy TrEMBL
Match: A0A0A0KVI5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G598740 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 7.3e-37 Identity = 77/99 (77.78%), Postives = 84/99 (84.85%), Query Frame = 0
BLAST of CmUC05G106800 vs. ExPASy TrEMBL
Match: A0A2P2IWJ2 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 4.6e-23 Identity = 61/108 (56.48%), Postives = 76/108 (70.37%), Query Frame = 0
BLAST of CmUC05G106800 vs. ExPASy TrEMBL
Match: A0A6A6M2J9 (Aminotran_1_2 domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_024367 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 1.0e-22 Identity = 59/107 (55.14%), Postives = 72/107 (67.29%), Query Frame = 0
BLAST of CmUC05G106800 vs. TAIR 10
Match: AT5G40460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 77.4 bits (189), Expect = 7.8e-15 Identity = 47/110 (42.73%), Postives = 62/110 (56.36%), Query Frame = 0
BLAST of CmUC05G106800 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 70.5 bits (171), Expect = 9.5e-13 Identity = 48/107 (44.86%), Postives = 61/107 (57.01%), Query Frame = 0
BLAST of CmUC05G106800 vs. TAIR 10
Match: AT1G10690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60783.1); Has 59 Blast hits to 59 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11 Identity = 49/116 (42.24%), Postives = 63/116 (54.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|