CmUC05G105210 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC05G105210
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	50S ribosomal protein L32, chloroplastic
Location	CmU531Chr05: 33653974 .. 33655968 (-)
RNA-Seq Expression	CmUC05G105210
Synteny	CmUC05G105210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGGCTTTGGGCTCTTGGGCCGAACAAAGGGATCCAAGCCCGTCACCAAGCCATTGGCCCAGCTCAATGTGCAAACGACGCCGTCGAGTACGCGCTGGGGTTGGGGCATTTGCAAATTCCTAAACCCCGTCGTCTTCTTCGTCTGATTTCCACCGCCGGTGTACTGAAATCAGCACTAGCACTTGCTCGCAGCTATGGCGTTGAGGATTATGAGGGCGCTCGAGGGTCAGACGGGTTCAATGCTAGGGCTTAAAGCGATGGCTAATGCTTTACCCCATTCTTCGCCGATTTCTGGGATCGTGGACCGTAAGGACTCCACACCCCTGCTTGTTCTTCCGGATTTTAACCAGGAATCTGATAAAGATAGAACCAACAACTGCAGTATTGGGGGGTTTGGTTTCCCTAGCTTGTCTTTTTCAGCGTCCATGGAGCTCATGGCTGTTCCTAAGAAGAAGGTATTGAATTTCCTCCTCATATTTTCAAATAATCAAACGCGGAGAAAGCCTGTGTTCGATTAGAAACTTAAATTGTTTGTTTCTTATGGATTAAGTAGAAACTTATAATTTCGCATCGCTTGAAGTTGTTGGGATGTGTAAGATGTTGCTGGAAGTATTAGAAATGAACTTGAAAACATTTGTAAAATGTAGTAACAAAGCAAGAAATTTAGAGGTGTAAGATGACGGCTAAATTGGACCTTAGATATTCATCTTTATATGTTTGGTCAATGTGCTCAATATCATATGGTACTTGGTAGTAGTGACTGTTTCTCAATGCATTAAGCACTGTGAAGATTGTATGGTTTTAGAGTCATTAGATTTTCTATTAGACTTCAAATTCTTATATATATGTTTGGAGCATTTCTTTAGGTTTCCAAAGTTCCTTTTCTAAAACTTGTTCTTGTTTGGATCTATTGAGAAATATGAGAAAACAATTCATAGTCTATGTTTTGCAGGTTTCTCCACATAAAAGGGGCATAAGAAATGGTCCAAAGGCTCTAAAACCTATTCCAGTTATAGTTCGGTGCAAGTAAGATTCTCCCTGGTCTGCCCTAACAAATCTGTTTAATGTTGATTTTAGCTTATAGGAAAGTTAGTCTGGAGTCCACTGATAGTGATAATGAAACATGATCTGTATTGTTATTGTATACATTAACATATCATCATTCGGAAGCTGTTTCTTCACAAATAACAAACAATACAACAAGCTCCAATAAATGCCATCGAAACAATAGCGGAATATTAAGCCCTCCAATAACCAAAACAATGGATCTTCTCTAGTTACTTGTTAGTGATTGAGGCAAAGCTTTTAGACTTTAGAGAAAAATGGTATTCACGATAAGTCTTTCAAGTAAAGAAAAAATGGAATCGGTTGGTGTCAAGAATGAGAATGACAAGGATGCCAATCGACTCTGCTAGCCAAAATTTCAATATCTTTCACTTCATTGGATAAGAAACGAGCATCATGAAATGTAGCAATAAGAATATTTCTGATAGCATAAATTGTTTAGAGGAAAGTTAGCCTCAGCCCATAATTTTGTGATAATGTTAAGTGGCTATAGTCTTCAAGGATTATCTTGGTGCTGACTGTGTTATTGCAGGAGTTGTGGTAAAGTGAAGCTGCCTCACTACTATTGTTGCAGTGGAAGGCCAGGGGAGCAGAATAACTCAGCCAGATGAGGCTACGCAGAGTAAAAAGGACAGACTGAAAGAAAGGTCTTCAGTCCCATAGTATGCTCCCCATACCTGGGAGCTACAGTTTCCTTTTGAGTATTCTTCTTTATTAGGTTCGTTAAGTTTTGGTTCTCCTGCTCATTGTATGACAGATTGTTAGATTTCAACATGTTATAACCATTAATTAGCTGTTGAGCCATATGCTTTGTGCTTAGCCAGCAGACTTCAGTTCTACCAGGTCTGAAATGCGACTCTTTTAGCATATGTTTTTCTTCTTAAACCACTTCTTGTTCTATAAATTATAGAAGATTTCTTCCCACA

mRNA sequence

ATGCCGGGCTTTGGGCTCTTGGGCCGAACAAAGGGATCCAAGCCCGTCACCAAGCCATTGGCCCAGCTCAATGTGCAAACGACGCCGTCGACTATGGCGTTGAGGATTATGAGGGCGCTCGAGGGTCAGACGGGTTCAATGCTAGGGCTTAAAGCGATGGCTAATGCTTTACCCCATTCTTCGCCGATTTCTGGGATCGTGGACCGTAAGGACTCCACACCCCTGCTTGTTCTTCCGGATTTTAACCAGGAATCTGATAAAGATAGAACCAACAACTGCAGTATTGGGGGGTTTGGTTTCCCTAGCTTGTCTTTTTCAGCGTCCATGGAGCTCATGGCTGTTCCTAAGAAGAAGGTTTCTCCACATAAAAGGGGCATAAGAAATGGTCCAAAGGCTCTAAAACCTATTCCAGTTATAGTTCGGTGCAAGAGTTGTGGTAAAGTGAAGCTGCCTCACTACTATTGTTGCAGTGGAAGGCCAGGGGAGCAGAATAACTCAGCCAGATGAGGCTACGCAGAGTAAAAAGGACAGACTGAAAGAAAGGTCTTCAGTCCCATAGTATGCTCCCCATACCTGGGAGCTACAGTTTCCTTTTGAGTATTCTTCTTTATTAGGTTCGTTAAGTTTTGGTTCTCCTGCTCATTGTATGACAGATTGTTAGATTTCAACATGTTATAACCATTAATTAGCTGTTGAGCCATATGCTTTGTGCTTAGCCAGCAGACTTCAGTTCTACCAGGTCTGAAATGCGACTCTTTTAGCATATGTTTTTCTTCTTAAACCACTTCTTGTTCTATAAATTATAGAAGATTTCTTCCCACA

Coding sequence (CDS)

ATGCCGGGCTTTGGGCTCTTGGGCCGAACAAAGGGATCCAAGCCCGTCACCAAGCCATTGGCCCAGCTCAATGTGCAAACGACGCCGTCGACTATGGCGTTGAGGATTATGAGGGCGCTCGAGGGTCAGACGGGTTCAATGCTAGGGCTTAAAGCGATGGCTAATGCTTTACCCCATTCTTCGCCGATTTCTGGGATCGTGGACCGTAAGGACTCCACACCCCTGCTTGTTCTTCCGGATTTTAACCAGGAATCTGATAAAGATAGAACCAACAACTGCAGTATTGGGGGGTTTGGTTTCCCTAGCTTGTCTTTTTCAGCGTCCATGGAGCTCATGGCTGTTCCTAAGAAGAAGGTTTCTCCACATAAAAGGGGCATAAGAAATGGTCCAAAGGCTCTAAAACCTATTCCAGTTATAGTTCGGTGCAAGAGTTGTGGTAAAGTGAAGCTGCCTCACTACTATTGTTGCAGTGGAAGGCCAGGGGAGCAGAATAACTCAGCCAGATGA

Protein sequence

MPGFGLLGRTKGSKPVTKPLAQLNVQTTPSTMALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLPHYYCCSGRPGEQNNSAR

Homology

[Close]

BLAST of CmUC05G105210 vs. NCBI nr
Match: XP_038891873.1 (uncharacterized protein LOC120081238 [Benincasa hispida])

HSP 1 Score: 250.8 bits (639), Expect = 8.6e-63
Identity = 123/137 (89.78%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 32  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTN 91
           MALRI+RALE QTGSMLGLK MANALPHSSPISGI+DRKDSTP LVLP+FNQESDKDR N
Sbjct: 1   MALRIVRALEAQTGSMLGLKGMANALPHSSPISGILDRKDSTPPLVLPEFNQESDKDRIN 60

Query: 92  NCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLP 151
           NCSI G GFP+LSFS SMELMAVPKKKVSP+KRGIRNGPKALKPIPVIVRCKSCGKVKLP
Sbjct: 61  NCSIMGSGFPTLSFSGSMELMAVPKKKVSPYKRGIRNGPKALKPIPVIVRCKSCGKVKLP 120

Query: 152 HYYCCSGRPGEQNNSAR 169
           HYYCCSGR GEQ+NSAR
Sbjct: 121 HYYCCSGRTGEQDNSAR 137

[Close]

BLAST of CmUC05G105210 vs. NCBI nr
Match: XP_023541204.1 (uncharacterized protein LOC111801437 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.8 bits (621), Expect = 1.0e-60
Identity = 116/137 (84.67%), Postives = 125/137 (91.24%), Query Frame = 0


Query: 32  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTN 91
           MALRI+RA+EGQTGSM GLKAM   LPHSSPISGI+DRKDS P LVLP+FN ESD+DR N
Sbjct: 1   MALRILRAVEGQTGSMFGLKAMTKVLPHSSPISGIMDRKDSAPPLVLPEFNHESDRDRIN 60

Query: 92  NCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLP 151
           NCSI GFGFPSLSFS SMELMAVPK+K SPHKRGIRNGPKALKPIPVI+RCKSCGKVKLP
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKTSPHKRGIRNGPKALKPIPVIIRCKSCGKVKLP 120

Query: 152 HYYCCSGRPGEQNNSAR 169
           H+YCCSGR GEQ+NSAR
Sbjct: 121 HFYCCSGRTGEQDNSAR 137

[Close]

BLAST of CmUC05G105210 vs. NCBI nr
Match: XP_022968104.1 (uncharacterized protein LOC111467436 [Cucurbita maxima])

HSP 1 Score: 242.3 bits (617), Expect = 3.1e-60
Identity = 116/137 (84.67%), Postives = 125/137 (91.24%), Query Frame = 0


Query: 32  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTN 91
           MALRI+RA+EGQTGSM GLKAMA  LPHSSPISGI+D KDS P LVLP+FN ESD+D  N
Sbjct: 1   MALRILRAVEGQTGSMFGLKAMAKVLPHSSPISGIMDHKDSAPPLVLPEFNHESDRDGIN 60

Query: 92  NCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLP 151
           NCSI GFGFPSLSFS SMELMAVPK+KVSPHKRGIRNGPKALKPIPVI+RCKSCGKVKLP
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVIIRCKSCGKVKLP 120

Query: 152 HYYCCSGRPGEQNNSAR 169
           H+YCCSGR GEQ+NSAR
Sbjct: 121 HFYCCSGRTGEQDNSAR 137

[Close]

BLAST of CmUC05G105210 vs. NCBI nr
Match: XP_022945635.1 (uncharacterized protein LOC111449817 [Cucurbita moschata])

HSP 1 Score: 241.1 bits (614), Expect = 6.8e-60
Identity = 115/137 (83.94%), Postives = 125/137 (91.24%), Query Frame = 0


Query: 32  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTN 91
           MALRI+RA+EGQTGSM GLKAMAN LPHSSPI+GI+ RKDS P LVLP+FN ESD+D  N
Sbjct: 1   MALRILRAVEGQTGSMFGLKAMANVLPHSSPITGIIYRKDSAPPLVLPEFNHESDRDGIN 60

Query: 92  NCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLP 151
           NCSI GFGFPSLSFS SMELMAVPK+K SPHKRGIRNGPKALKPIPVI+RCKSCGKVKLP
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKTSPHKRGIRNGPKALKPIPVIIRCKSCGKVKLP 120

Query: 152 HYYCCSGRPGEQNNSAR 169
           H+YCCSGR GEQ+NSAR
Sbjct: 121 HFYCCSGRTGEQDNSAR 137

[Close]

BLAST of CmUC05G105210 vs. NCBI nr
Match: KAG6574067.1 (hypothetical protein SDJN03_27954, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 241.1 bits (614), Expect = 6.8e-60
Identity = 115/137 (83.94%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 32  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTN 91
           MALRI+RA+EGQTGSM GLKAM   LPHSSPISGI+DRKDS P LVLP+FN ESD+D  N
Sbjct: 1   MALRILRAVEGQTGSMFGLKAMTKVLPHSSPISGIMDRKDSAPPLVLPEFNHESDRDGIN 60

Query: 92  NCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLP 151
           NCSI GFGFPSLSFS SMELMAVPK+K SPHKRGIRNGPKALKPIPVI+RCKSCGKVKLP
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKTSPHKRGIRNGPKALKPIPVIIRCKSCGKVKLP 120

Query: 152 HYYCCSGRPGEQNNSAR 169
           H+YCCSGR GEQ+NSAR
Sbjct: 121 HFYCCSGRTGEQDNSAR 137

[Close]

BLAST of CmUC05G105210 vs. ExPASy Swiss-Prot
Match: Q2N923 (50S ribosomal protein L32 OS=Erythrobacter litoralis (strain HTCC2594) OX=314225 GN=rpmF PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 6.5e-05
Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 0


Query: 112 MAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLPHYYC 156
           MAVPK+KVSPH+RG R    +LK +     C +CG++K PH  C
Sbjct: 1   MAVPKRKVSPHRRGNRRAHDSLK-VEAFHECNNCGELKRPHNMC 43

[Close]

BLAST of CmUC05G105210 vs. ExPASy Swiss-Prot
Match: Q1GT88 (50S ribosomal protein L32 OS=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) OX=317655 GN=rpmF PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.2e-04
Identity = 21/44 (47.73%), Postives = 28/44 (63.64%), Query Frame = 0


Query: 112 MAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLPHYYC 156
           MAVPK+K SP KRG+R    +LK +     C +CG++K PH  C
Sbjct: 1   MAVPKRKTSPSKRGMRRSHDSLK-VEAFQECPNCGELKRPHNLC 43

[Close]

BLAST of CmUC05G105210 vs. ExPASy Swiss-Prot
Match: Q0BTE2 (50S ribosomal protein L32 OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) OX=391165 GN=rpmF PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.2e-04
Identity = 21/44 (47.73%), Postives = 28/44 (63.64%), Query Frame = 0


Query: 112 MAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLPHYYC 156
           MAVPKKK SP +RG+R   +AL        C +CG++K PH+ C
Sbjct: 1   MAVPKKKTSPSRRGMRRSHQALTG-EAYTECSNCGELKRPHHVC 43

[Close]

BLAST of CmUC05G105210 vs. ExPASy Swiss-Prot
Match: Q5FUN5 (50S ribosomal protein L32 OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rpmF PE=3 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 9.4e-04
Identity = 19/44 (43.18%), Postives = 29/44 (65.91%), Query Frame = 0


Query: 112 MAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLPHYYC 156
           MAVPK+K +P +RG+R   +AL  +     C +CG++K PH+ C
Sbjct: 1   MAVPKRKTTPSRRGMRRSHQAL-GVEAHAECSNCGEMKRPHHVC 43

[Close]

BLAST of CmUC05G105210 vs. ExPASy TrEMBL
Match: A0A6J1HYN6 (50S ribosomal protein L32, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467436 PE=3 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.5e-60
Identity = 116/137 (84.67%), Postives = 125/137 (91.24%), Query Frame = 0


Query: 32  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTN 91
           MALRI+RA+EGQTGSM GLKAMA  LPHSSPISGI+D KDS P LVLP+FN ESD+D  N
Sbjct: 1   MALRILRAVEGQTGSMFGLKAMAKVLPHSSPISGIMDHKDSAPPLVLPEFNHESDRDGIN 60

Query: 92  NCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLP 151
           NCSI GFGFPSLSFS SMELMAVPK+KVSPHKRGIRNGPKALKPIPVI+RCKSCGKVKLP
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVIIRCKSCGKVKLP 120

Query: 152 HYYCCSGRPGEQNNSAR 169
           H+YCCSGR GEQ+NSAR
Sbjct: 121 HFYCCSGRTGEQDNSAR 137

[Close]

BLAST of CmUC05G105210 vs. ExPASy TrEMBL
Match: A0A6J1G1I2 (50S ribosomal protein L32, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449817 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.3e-60
Identity = 115/137 (83.94%), Postives = 125/137 (91.24%), Query Frame = 0


Query: 32  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTN 91
           MALRI+RA+EGQTGSM GLKAMAN LPHSSPI+GI+ RKDS P LVLP+FN ESD+D  N
Sbjct: 1   MALRILRAVEGQTGSMFGLKAMANVLPHSSPITGIIYRKDSAPPLVLPEFNHESDRDGIN 60

Query: 92  NCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLP 151
           NCSI GFGFPSLSFS SMELMAVPK+K SPHKRGIRNGPKALKPIPVI+RCKSCGKVKLP
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKTSPHKRGIRNGPKALKPIPVIIRCKSCGKVKLP 120

Query: 152 HYYCCSGRPGEQNNSAR 169
           H+YCCSGR GEQ+NSAR
Sbjct: 121 HFYCCSGRTGEQDNSAR 137

[Close]

BLAST of CmUC05G105210 vs. ExPASy TrEMBL
Match: A0A0A0KQP7 (50S ribosomal protein L32, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_5G606360 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.6e-59
Identity = 116/136 (85.29%), Postives = 123/136 (90.44%), Query Frame = 0


Query: 32  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTN 91
           MALRIMRALEGQ GSMLGLKAMA  LPHSSPISG++  KDS P LVLP+FNQE D D+TN
Sbjct: 1   MALRIMRALEGQMGSMLGLKAMAYGLPHSSPISGVMGPKDSPPPLVLPEFNQEYDDDKTN 60

Query: 92  NCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLP 151
           NCSI GFGFPSLSFS SMELMAVPKKKVSPHKR IRN PKALKPIPVIVRCK+CGKVKLP
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPKALKPIPVIVRCKACGKVKLP 120

Query: 152 HYYCCSGRPGEQNNSA 168
           HYYCCSGRPG+Q+NSA
Sbjct: 121 HYYCCSGRPGDQDNSA 136

[Close]

BLAST of CmUC05G105210 vs. ExPASy TrEMBL
Match: A0A6J1DBR3 (50S ribosomal protein L32, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111019232 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.4e-58
Identity = 116/140 (82.86%), Postives = 124/140 (88.57%), Query Frame = 0


Query: 32  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTN 91
           MALRIMRA+EGQT SMLGLKAMAN LPH SP+SGI+DRKDSTP LVLP+FN ESD DR  
Sbjct: 1   MALRIMRAVEGQTCSMLGLKAMANVLPHFSPLSGIMDRKDSTPPLVLPEFNHESDSDRIG 60

Query: 92  NCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLP 151
           NCS  GFGFPSLSFS SMELMAVPK+KVSPHKRGIRNGPKALKPIPVI+RCKSCGKVKLP
Sbjct: 61  NCSSVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVIIRCKSCGKVKLP 120

Query: 152 HYYCCS---GRPGEQNNSAR 169
           H+YCCS   GR GEQ+NS R
Sbjct: 121 HFYCCSGDRGRTGEQDNSTR 140

[Close]

BLAST of CmUC05G105210 vs. ExPASy TrEMBL
Match: A0A5A7SYB6 (50S ribosomal protein L32, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00190 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.7e-56
Identity = 114/136 (83.82%), Postives = 120/136 (88.24%), Query Frame = 0


Query: 32  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTN 91
           MALRIMRALEGQTGSMLGLKAMA  LPHSS   G++  KDS P LVLP+FNQESD+DR N
Sbjct: 1   MALRIMRALEGQTGSMLGLKAMAYGLPHSS--HGVMGPKDSPPPLVLPEFNQESDEDRIN 60

Query: 92  NCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLP 151
           NCSI GFGFPSL FS SMELMAVPKKKVSPHKR IRN PKALKPIPVI+RCK CGKVKLP
Sbjct: 61  NCSIVGFGFPSLYFSGSMELMAVPKKKVSPHKRRIRNAPKALKPIPVIIRCKGCGKVKLP 120

Query: 152 HYYCCSGRPGEQNNSA 168
           HYYCCSGRPGEQ+NSA
Sbjct: 121 HYYCCSGRPGEQDNSA 134

[Close]

BLAST of CmUC05G105210 vs. TAIR 10
Match: AT1G26740.1 (Ribosomal L32p protein family )

HSP 1 Score: 133.3 bits (334), Expect = 1.9e-31
Identity = 67/129 (51.94%), Postives = 93/129 (72.09%), Query Frame = 0


Query: 32  MALRI--MRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDR 91
           MALR+  ++    ++  +L  +++++     SP++G  DR  S P LVLP+F+Q  ++  
Sbjct: 1   MALRLTSLKRAAVESCRILETRSLSHVAAMPSPLNGAFDRPISMPPLVLPEFDQ--NQPG 60

Query: 92  TNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVK 151
                  GFG PS +F+ SMELMAVPKKK+S HKRGIRNGPKALKP+PVI+RC+SCG+VK
Sbjct: 61  LIEEKSFGFGLPSFAFNGSMELMAVPKKKISKHKRGIRNGPKALKPVPVIIRCRSCGRVK 120

Query: 152 LPHYYCCSG 159
           LPH++CCSG
Sbjct: 121 LPHFFCCSG 127

[Close]

BLAST of CmUC05G105210 vs. TAIR 10
Match: AT1G69485.1 (Ribosomal L32p protein family )

HSP 1 Score: 105.1 bits (261), Expect = 5.4e-23
Identity = 47/61 (77.05%), Postives = 53/61 (86.89%), Query Frame = 0


Query: 109 MELMAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLPHYYCCSGR---PGEQNN 167
           MELMAVPKKK+S HKRGIRNGPKA KP PVI+RC+SCG+VKLPH+YCCSG    P EQ+N
Sbjct: 1   MELMAVPKKKISKHKRGIRNGPKAFKPTPVIIRCRSCGRVKLPHFYCCSGERAIPDEQSN 60

The following BLAST results are available for this feature:

BLAST of CmUC05G105210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891873.1	8.6e-63	89.78	uncharacterized protein LOC120081238 [Benincasa hispida]	[more]
XP_023541204.1	1.0e-60	84.67	uncharacterized protein LOC111801437 [Cucurbita pepo subsp. pepo]	[more]
XP_022968104.1	3.1e-60	84.67	uncharacterized protein LOC111467436 [Cucurbita maxima]	[more]
XP_022945635.1	6.8e-60	83.94	uncharacterized protein LOC111449817 [Cucurbita moschata]	[more]
KAG6574067.1	6.8e-60	83.94	hypothetical protein SDJN03_27954, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmUC05G105210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2N923	6.5e-05	50.00	50S ribosomal protein L32 OS=Erythrobacter litoralis (strain HTCC2594) OX=314225...	[more]
Q1GT88	3.2e-04	47.73	50S ribosomal protein L32 OS=Sphingopyxis alaskensis (strain DSM 13593 / LMG 188...	[more]
Q0BTE2	4.2e-04	47.73	50S ribosomal protein L32 OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / ...	[more]
Q5FUN5	9.4e-04	43.18	50S ribosomal protein L32 OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rp...	[more]

BLAST of CmUC05G105210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HYN6	1.5e-60	84.67	50S ribosomal protein L32, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11146...	[more]
A0A6J1G1I2	3.3e-60	83.94	50S ribosomal protein L32, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A0A0KQP7	3.6e-59	85.29	50S ribosomal protein L32, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_5G606...	[more]
A0A6J1DBR3	2.4e-58	82.86	50S ribosomal protein L32, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A5A7SYB6	1.7e-56	83.82	50S ribosomal protein L32, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of CmUC05G105210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26740.1	1.9e-31	51.94	Ribosomal L32p protein family	[more]
AT1G69485.1	5.4e-23	77.05	Ribosomal L32p protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002677	Ribosomal protein L32p	PFAM	PF01783	Ribosomal_L32p	coord: 113..157 e-value: 1.2E-10 score: 41.5
IPR002677	Ribosomal protein L32p	TIGRFAM	TIGR01031	TIGR01031	coord: 113..155 e-value: 8.8E-9 score: 33.5
None	No IPR available	PANTHER	PTHR21026:SF5	BNACNNG33200D PROTEIN	coord: 51..159
None	No IPR available	PANTHER	PTHR21026	39S RIBOSOMAL PROTEIN L32, MITOCHONDRIAL	coord: 51..159
IPR011332	Zinc-binding ribosomal protein	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 111..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC05G105210.1	CmUC05G105210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome