CmUC05G104080 (gene) Watermelon (USVL531) v1

Overview
NameCmUC05G104080
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr05: 32761355 .. 32761612 (+)
RNA-Seq ExpressionCmUC05G104080
SyntenyCmUC05G104080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTTGCAACAGTGGCAGAGACCGGTGGACCAAGCAACTGGGGAGTGGGGTTTCGGTTCACAGGGATTTGGGGGAAAATTGGCCGGCGCCGCCATGCGGGAGTGGTTGAAAGTGGCAGAAAGAGAGGTTGGTGAGGGTGGCGGCAGTGGCGGTTGTGGCGGTGCCGATGGTAGAGAAGAGAAAGTAGCGTCCATAAACTTGAAGGAAGTGAATGCGATAAGAAATGTAAAAGGGCCGGCCGATATCTTTATTTGA

mRNA sequence

ATGTCGTTGCAACAGTGGCAGAGACCGGTGGACCAAGCAACTGGGGAGTGGGGTTTCGGTTCACAGGGATTTGGGGGAAAATTGGCCGGCGCCGCCATGCGGGAGTGGTTGAAAGTGGCAGAAAGAGAGGTTGGTGAGGGTGGCGGCAGTGGCGGTTGTGGCGGTGCCGATGGTAGAGAAGAGAAAGTAGCGTCCATAAACTTGAAGGAAGTGAATGCGATAAGAAATGTAAAAGGGCCGGCCGATATCTTTATTTGA

Coding sequence (CDS)

ATGTCGTTGCAACAGTGGCAGAGACCGGTGGACCAAGCAACTGGGGAGTGGGGTTTCGGTTCACAGGGATTTGGGGGAAAATTGGCCGGCGCCGCCATGCGGGAGTGGTTGAAAGTGGCAGAAAGAGAGGTTGGTGAGGGTGGCGGCAGTGGCGGTTGTGGCGGTGCCGATGGTAGAGAAGAGAAAGTAGCGTCCATAAACTTGAAGGAAGTGAATGCGATAAGAAATGTAAAAGGGCCGGCCGATATCTTTATTTGA

Protein sequence

MSLQQWQRPVDQATGEWGFGSQGFGGKLAGAAMREWLKVAEREVGEGGGSGGCGGADGREEKVASINLKEVNAIRNVKGPADIFI
Homology
[Close]
BLAST of CmUC05G104080 vs. NCBI nr
Match: KAE8648786.1 (hypothetical protein Csa_009080 [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 3.7e-14
Identity = 44/60 (73.33%), Postives = 46/60 (76.67%), Query Frame = 0 

Query: 6  WQRPVDQATGEWGFGSQGFGGKLAGAAMREWLKVAEREVGEGGGSGGCGGADGREEKVAS 65
          WQRPVDQ T EWGFGS GF GKLAG AMR  LK+  +EVGEGG  GGC GADG EE VAS
Sbjct: 5  WQRPVDQPTVEWGFGSHGFWGKLAGVAMRVCLKLTGKEVGEGGRDGGCSGADGSEENVAS 64

[Close]
BLAST of CmUC05G104080 vs. ExPASy TrEMBL
Match: A0A0A0KR25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608480 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.0e-17
Identity = 49/65 (75.38%), Postives = 51/65 (78.46%), Query Frame = 0 

Query: 1  MSLQQWQRPVDQATGEWGFGSQGFGGKLAGAAMREWLKVAEREVGEGGGSGGCGGADGRE 60
          MSLQQWQRPVDQ T EWGFGS GF GKLAG AMR  LK+  +EVGEGG  GGC GADG E
Sbjct: 1  MSLQQWQRPVDQPTVEWGFGSHGFWGKLAGVAMRVCLKLTGKEVGEGGRDGGCSGADGSE 60

Query: 61 EKVAS 66
          E VAS
Sbjct: 61 ENVAS 65

The following BLAST results are available for this feature:
BLAST of CmUC05G104080 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8648786.13.7e-1473.33hypothetical protein Csa_009080 [Cucumis sativus][more]
BLAST of CmUC05G104080 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC05G104080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KR253.0e-1775.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608480 PE=4 SV=1[more]
BLAST of CmUC05G104080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC05G104080.1CmUC05G104080.1mRNA