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CmUC05G103820 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCACTGCGCCATTCTGTCAAACGCCTTCTCAGGCCACGAGGAGATGAGAACCTCTGTTCCCTGTCCCATTTCTGACTTCAGAGATCAACTTGTCTGCCCTAAACCACGCCGTCTCACCAATAATCTCAACGTTGCCGTCAACGGCCACGCCGATAGCTCCCTCCGGTGGAATCTAAGGTCAGTCGTTTCCTTTCTTTATTCTACAACCCCCCCCCCCCCCCCCCCCCCCCCAATTACTTTCCTTTTGTTATAAGATTCTAATTCTTCTTCAATTGAATTTCAGTCACCAAGTTGAGCAAATCGACATGGCAGCCGGACCGGATCTGCTGGACTTCCTCCTGACGAAGGTTTGCTCTCCTCTGTTTTTTTTTAGTTTATTCCGATCATTAAATTAATATCGGAGTTTATACTGTATAACTTCCTTTTGGTTAATGATTATGTGGTTAATGTAAACAGGGTGGTTGCAGCGTGGACCAATCGTTTACCCAGTTGGGTTCGTCGCCCCCGTTTTTATGTGGGTCTCCGCCGAGCAGAGTAGCCAACCCATTAATTCAGGACGCTCGATTTAGGGATGAGAAATTCATACCCTTTGCTCCGATTGCTTCGCCGTCAGGTCAGTTGTCGCCCTCTACATCCTCTAGGAAAGGAGGCCGTGTAAGGGCGAGTTTTGGGAATAAACCAACGGTGAGGATTGAGGGTTTCGATTGCCTTGACAGGGATAGGCAAAATTGCAGCATCCCTGCTTTCGCCTAG ATGAATCACTGCGCCATTCTGTCAAACGCCTTCTCAGGCCACGAGGAGATGAGAACCTCTGTTCCCTGTCCCATTTCTGACTTCAGAGATCAACTTGTCTGCCCTAAACCACGCCGTCTCACCAATAATCTCAACGTTGCCGTCAACGGCCACGCCGATAGCTCCCTCCGGTGGAATCTAAGTCACCAAGTTGAGCAAATCGACATGGCAGCCGGACCGGATCTGCTGGACTTCCTCCTGACGAAGGGTGGTTGCAGCGTGGACCAATCGTTTACCCAGTTGGGTTCGTCGCCCCCGTTTTTATGTGGGTCTCCGCCGAGCAGAGTAGCCAACCCATTAATTCAGGACGCTCGATTTAGGGATGAGAAATTCATACCCTTTGCTCCGATTGCTTCGCCGTCAGGTCAGTTGTCGCCCTCTACATCCTCTAGGAAAGGAGGCCGTGTAAGGGCGAGTTTTGGGAATAAACCAACGGTGAGGATTGAGGGTTTCGATTGCCTTGACAGGGATAGGCAAAATTGCAGCATCCCTGCTTTCGCCTAG ATGAATCACTGCGCCATTCTGTCAAACGCCTTCTCAGGCCACGAGGAGATGAGAACCTCTGTTCCCTGTCCCATTTCTGACTTCAGAGATCAACTTGTCTGCCCTAAACCACGCCGTCTCACCAATAATCTCAACGTTGCCGTCAACGGCCACGCCGATAGCTCCCTCCGGTGGAATCTAAGTCACCAAGTTGAGCAAATCGACATGGCAGCCGGACCGGATCTGCTGGACTTCCTCCTGACGAAGGGTGGTTGCAGCGTGGACCAATCGTTTACCCAGTTGGGTTCGTCGCCCCCGTTTTTATGTGGGTCTCCGCCGAGCAGAGTAGCCAACCCATTAATTCAGGACGCTCGATTTAGGGATGAGAAATTCATACCCTTTGCTCCGATTGCTTCGCCGTCAGGTCAGTTGTCGCCCTCTACATCCTCTAGGAAAGGAGGCCGTGTAAGGGCGAGTTTTGGGAATAAACCAACGGTGAGGATTGAGGGTTTCGATTGCCTTGACAGGGATAGGCAAAATTGCAGCATCCCTGCTTTCGCCTAG MNHCAILSNAFSGHEEMRTSVPCPISDFRDQLVCPKPRRLTNNLNVAVNGHADSSLRWNLSHQVEQIDMAAGPDLLDFLLTKGGCSVDQSFTQLGSSPPFLCGSPPSRVANPLIQDARFRDEKFIPFAPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA Homology
BLAST of CmUC05G103820 vs. NCBI nr
Match: XP_038893407.1 (uncharacterized protein LOC120082204 [Benincasa hispida]) HSP 1 Score: 360.1 bits (923), Expect = 1.1e-95 Identity = 172/180 (95.56%), Postives = 176/180 (97.78%), Query Frame = 0
BLAST of CmUC05G103820 vs. NCBI nr
Match: XP_008446603.1 (PREDICTED: uncharacterized protein LOC103489287 [Cucumis melo] >KAA0034558.1 uncharacterized protein E6C27_scaffold65G005740 [Cucumis melo var. makuwa] >TYK09111.1 uncharacterized protein E5676_scaffold475G001020 [Cucumis melo var. makuwa]) HSP 1 Score: 347.4 bits (890), Expect = 7.2e-92 Identity = 167/180 (92.78%), Postives = 170/180 (94.44%), Query Frame = 0
BLAST of CmUC05G103820 vs. NCBI nr
Match: XP_004135095.1 (uncharacterized protein LOC101219538 [Cucumis sativus] >KGN52086.1 hypothetical protein Csa_007855 [Cucumis sativus]) HSP 1 Score: 346.7 bits (888), Expect = 1.2e-91 Identity = 166/180 (92.22%), Postives = 170/180 (94.44%), Query Frame = 0
BLAST of CmUC05G103820 vs. NCBI nr
Match: XP_022957437.1 (uncharacterized protein LOC111458833 [Cucurbita moschata] >KAG7032074.1 hypothetical protein SDJN02_06117 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 335.1 bits (858), Expect = 3.7e-88 Identity = 163/180 (90.56%), Postives = 166/180 (92.22%), Query Frame = 0
BLAST of CmUC05G103820 vs. NCBI nr
Match: KAG6601286.1 (hypothetical protein SDJN03_06519, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 335.1 bits (858), Expect = 3.7e-88 Identity = 163/180 (90.56%), Postives = 166/180 (92.22%), Query Frame = 0
BLAST of CmUC05G103820 vs. ExPASy TrEMBL
Match: A0A5D3CB96 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001020 PE=4 SV=1) HSP 1 Score: 347.4 bits (890), Expect = 3.5e-92 Identity = 167/180 (92.78%), Postives = 170/180 (94.44%), Query Frame = 0
BLAST of CmUC05G103820 vs. ExPASy TrEMBL
Match: A0A1S3BG95 (uncharacterized protein LOC103489287 OS=Cucumis melo OX=3656 GN=LOC103489287 PE=4 SV=1) HSP 1 Score: 347.4 bits (890), Expect = 3.5e-92 Identity = 167/180 (92.78%), Postives = 170/180 (94.44%), Query Frame = 0
BLAST of CmUC05G103820 vs. ExPASy TrEMBL
Match: A0A0A0KWF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609720 PE=4 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 6.0e-92 Identity = 166/180 (92.22%), Postives = 170/180 (94.44%), Query Frame = 0
BLAST of CmUC05G103820 vs. ExPASy TrEMBL
Match: A0A6J1GZ47 (uncharacterized protein LOC111458833 OS=Cucurbita moschata OX=3662 GN=LOC111458833 PE=4 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 1.8e-88 Identity = 163/180 (90.56%), Postives = 166/180 (92.22%), Query Frame = 0
BLAST of CmUC05G103820 vs. ExPASy TrEMBL
Match: A0A6J1DC97 (uncharacterized protein LOC111018762 OS=Momordica charantia OX=3673 GN=LOC111018762 PE=4 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 5.2e-88 Identity = 163/181 (90.06%), Postives = 168/181 (92.82%), Query Frame = 0
BLAST of CmUC05G103820 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 164.1 bits (414), Expect = 1.1e-40 Identity = 93/187 (49.73%), Postives = 116/187 (62.03%), Query Frame = 0
BLAST of CmUC05G103820 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 139.8 bits (351), Expect = 2.1e-33 Identity = 88/181 (48.62%), Postives = 98/181 (54.14%), Query Frame = 0
BLAST of CmUC05G103820 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 138.7 bits (348), Expect = 4.7e-33 Identity = 85/186 (45.70%), Postives = 112/186 (60.22%), Query Frame = 0
BLAST of CmUC05G103820 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 138.7 bits (348), Expect = 4.7e-33 Identity = 85/186 (45.70%), Postives = 112/186 (60.22%), Query Frame = 0
BLAST of CmUC05G103820 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 135.2 bits (339), Expect = 5.2e-32 Identity = 88/192 (45.83%), Postives = 108/192 (56.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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