CmUC05G103020 (gene) Watermelon (USVL531) v1

Overview
NameCmUC05G103020
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Descriptionglycine-rich RNA-binding protein GRP1A-like
LocationCmU531Chr05: 31878985 .. 31885047 (+)
RNA-Seq ExpressionCmUC05G103020
SyntenyCmUC05G103020
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAAACATGGTACCAGATACAATACAATTACAATAATACCTCATGAGGGTCGACATGGAGATGCAAATGTGATCCCAATACATATAGCTCTCGCAGGTGGAGGCGGAGGCGCAGGCAGAGGCGGAGGCGCAGGAGGAAGAGGCGGAGGTTTAGGTGGCAGCAGCCACGGAGGAGGAGGTGACAGTGGCACAGGAAATCGGCATCAAAACTACATAAGGTTTATAGTAGGTGGAATTTCCATATCAATTGCATATTTGTGTGCACTCATTTGATATGGAAACATATCAAAAAAAAAAAAAAAAAAAACCATCAACAAAAGTGTGAAAGGGTGGTTTTATATTTTGGATAAAAACAATCAAAATAATGTGATGTTTGTTTGATTGAGTTATGATATGTATGTAAATTTGACAAGTGTTTGAATTGTACAGATTTGATAAGTCGACTTTGTTAAACTTGTGTTTTGATTTTGTTAAGTGGAATTTGTTAAGTCTGCGTTTGAATTCTATTTTGTTAGAAGTGTATTTGGTTGGTAAATTCGAATTTTGTAATAAATAAAAGATAACTTATATATCGGTTATTTAATTAGAGTAATAAAAACTATATGTTATTATTATTATTATTAGAAATGTTATCAATAGCAAAATGAGACAAACAATTAACAAATATATAATAAAATATTCCTATATTTGTAAATAGTTTGATATTTTTTTATTTATAATAATTTTGAATAATTATTATAAGAATAAATAAAATATTTCTTATACATTTGTTCACCCAATTCTTTTCGAATAATTATTTTATATAATAAATATTTGATTGTTTATAAAAAAAACATTTTTGGAGTATTTACAGAAGAGTGAACAAATATATAAATTATTGCATATAAATATATCCAACATGAAATGAGGCATAGAAAATATGTTATCAATTGTTTATTTAATTATTTATTTACTTGCTATGTTGACTATATTTATTTACCAATTATCAAAAACTTACAACTAAACTCGGACTTTCTTTATTTAACTTATAGACATGATTATGATTATAAAGTTAAAATATTTTAAATAATAATTTTAAAAATTACTGACTTCACGACAAACTAAGATAGTATAATTAATTAATTTTACAAATATCAAATATATAAAGAATAGTAGTAAACAAACCAAGTGGGTGTGATTTGTAGATTTTCTTCGTTAGTGCTTTAGAAAAGGAAAAAAGATTGTGTACCTGATTAAAAGAGACCTCGCCTACCGTGATCGACTTCAGTGCAGTGATATCATCGCTTACCAAGATAGTGGCTTCCAGCAACACGATTGAGATATTAATTATCACATTGCACAATCGTGTACCATAAATCACCTGATGCAATCACAACAAATTATTTCAACTATCTATTTTCATGTTAATATGAGTATAGTTCAACTAATATAAACTTATATTATCAACAACGAAATTTGAAGTTTGACTTCTCCAATCTACATTTTCCAAACAATAAATAAAGTCATATTTGGGAGAGTAATACTTAAGTGCAACCTGAATTACACTCATATCCATGCATCTCCTTCAAACACACACACACAAACATATATAAAGAAAAAGTTTACCATGTGTTAACTTGTGATTGGATACTTGGGATGTGCTACACAAAGATAAGTGCAACCCGAAATGTACCCAAATATTTTTCTATTTAAGAATGACAAAAACAAAAAACTTCAAAATCCACTACATCAACATTACTAGGAGTGTAGTTTAAACCATGATATTAAAAGTTAGGATGATTGTTTTAAAAGACAAAACTATTAGAAATTTTTACAAATATAGCAAAATGTCACTATATATTCAATGATAGATAATGATAGATTATAAACATGTATCTGTGTCTATCACTAATAATCAGACAATAATAGATGATAGTAGTCTGTCAGTGTCTATCAGTGATAGACATGACATTTTGCTATATTTATAAATATTTTAGCTTATTTTGCTATATTTAAAAACAACCTTTAAATTTATGTCCATAGATAAAAATTTCATCAATGTTCTTGCATTTTCACAAGTTTGACATTTGACATAAGAGATGAATTGACATTTTCAAACCTGGATATTTCAAATAAAAAAAAAAAAACCATAAAAACTAAGCAGTGATCCATAGAAATCAAAGCAATTACATCTTCAGATAGTCGAAGAATATGGGAAAACTCATATGGTCAGAAACCACAAGGATTTGAGCAAGCATCGATTAGGCATTTGATGTTTTGTTTTTTGACTCAAAGGGTCAAAAGGATATGTTCTCTTTCAAAACCAAATACTTTTTTAGAGTTTCACCAGTTGGGTCGTCTCTACTTCTAGCAATTGCCCCCTCCATTCTTGCCAACCAATCGCCATATCGCTGCTAATCTACCAATAAGAAATAGAAACACCAACAGAGAAAAGGTGAGAGAATGGGTGTGAAAGCTCTCAGTCTCAGCCGTGTATAGAACAAAGAAGATTTCAAAGATCATCAAAGAGACAATGACAAGAAGAGAAGAATCAGAGGTTAAAACCATAATATCATGGAAGAAAGAATTTAAACAGAGAAAAAGAAACCTAAGTTCGGTTGTTGGTGAGGTCACATCAAACCTAATCGGTTTTGATTAATACTAGGTTAAAAAATACTTTTGGTTTCTATACTTTCATGGAAGTAACAATTTGATCTTTAAAACATTAGTTTGTAACAATTTAGTTATTGTACTTTCAATTTCGTAACAATTTAGTCCATAAACTTTGATATGTAACAATTTAGTCCCTAACATAGAAAAAATCATCAAAATTAGATGTCAATTTTTATTATTTTATGATCTAAACTATGTATTTTGTAAAAATATTGAGTTTCTAATTAGTTTATATTTTTATTTATACAAAAAAAATCTTATTAAATTTTAACACTAATTTCTACACTAGGGACTAAATTGTTACATAATAAAATTCAGAGACTAAATTATCGCAAAATTGAAAGTATAGGGACTAAATCATTCCAGATCAAAGTTCAAGTACTAAATTGTTTACTTTTACGAAGGTTTATGAATTAAAAGTGATTTTTAGCTTTATTATTATCATCAAACCACAGTAAAGCAGAAGAGTGAAAACCGTGTCCTAATCCTGAAGCAACAGTTTCAAAAGGAGGAAAGAAAAAAAAAAAGGGAAAAAAGATTCGAGTTCGTGTTTCTTTTTAGAAGTATGTCTTATTCTAAACCTGAGATAAATTGCTTTAGTGGATTGGAAGAAGAAAAACCTAAAAACTTCCACTTCCCCACCGTTTTGTTTATAAATCAGACCATTTTCCTCTAACCACATAGAGAGAAGCTAGCTGTTTCTATTACAATGGGAAGAAGAAAAGGGATAATATTGATTTTCTTGATGTTTTGTTCTACCATGGCCATTTCATCTACTGCTCTCCAACAACAAATCTTCCTAACAGGTCAGTATCCTTTCCAATCTCTTGAGGAAATTCAATTCACCCAATTTTATTCATTCTCTATGGTTTTATCACAAATCTTCTTTGTATGTTCATTTTTTGGGCCAGACAATTTCAAAATTCAATCAAAGACTAAACAACATGAAATCATTTCTTGGTATCTAGTTCTAAATGAAAGTCTAGTCTCCACTTACGAAAAAAAAAAAAAAAAAAACTCAGAAGAAAATTATTCAGTGGTTGCCTCATAATAATATAACCTAACCTAATTGTTAGAGATGAATTCAATAATTTGCATCTTCTCTATATCCAATAGTAAAAAGAATGTCAGCACAGCTCACCGAACAATTTTTACTTAAAAAGCTCAAAAGATCATCATTATGTCACTGGGTGTTTTTGTTACTGCTGAATCATCTTTATTCTCTTCTCTTGAAAGACGTGAAAGGAAATTCATTGTTGGGGTAAAAAGTAAACTTCGGTTAAATTGTCCATCTCAAGAGCTTAATCTTGTGGGTTACTACAAAATTTTAGTCATACTAATATTAAAGATCTGCATGACTTCTAATTTTGATATTATATTAAAAGACTCGTTAGCTCAGAAGTTTAGGTTAGGATAATTTTAATTATAACAATGCTTTGATTATCATAATCATGCACAAAATAAAGTATGTACGACAAAGTTGAAAAATGAGACCCACAAGGAACAGAAACAAAGTGCACATTCTAGATAACATGTGTGGGTGTGTATAAACGACCCACAAGATCTGAATAAAATAGTAATGTGAAAAAAAAAAAAAAAGAATAAAAGAATAAAAGATTAATAGAAGAATATAGGTGAATGAGGAGTGCAAGTCAATATGTCTTTTACAACGTCGAATGAAAATAAATATACAAATAAAACAAAGTTCAATATCCTGTAAATGGAGGGACATAACAATGTATCGGTTTTCCACTAACTTTAGCTTTTGGGAGAGAATACTTTAAATCAATATCTGTCAAGATGCTGCAACTCAATACTGACAGAAGTGATCCAATAATCAACTATTCTAATTAGTCAAGATATTCATAATCTTTGATTTAGTTTTTTTATTTGAATGGTAATACTTAATAAAAACAAAGTTATCAAAATGATTTAAGTTTTCATTTATTTTATGATACATGATGCTTACAAGTTACATATATGTTTGGTTGCAAAAAGTTTGTTTTCTTAGAAGTGTTTTCTATTACTATAGCTCAAAAACTTATTCGTCAAGCTCTTCCTATTAGTCTGCATTTAATTACAGAATATATATATTAATACTAAAAATGTAATTTAAAACTTGGGTAGAGATAAAAAGGAGTTTCAAAAACAGAAAAAATATAATTGAACAAAAATTATTAAGATTAATTACTAAAATGACTACACGCAACTCGCCTGAAACTACAACATTTGGGTATCAAGGAAACTCATAGATATTAAATCTTAGGTAGGTGACCATCATGGATTGAACCCATGACCTCTTAACCATTTTCACCACTAGGCCAACCAATGATGATTGTATTATTAATATGAATGTGATTTCAAGTCGTTTAAGTTATAGACAAACATTGGACGATCGAAGCGGTATAAGTAGAAAAGTAAATTAGCAAAGACAATCAAATTATTGCTTTTTAAAGTCTAGGAATTAAAATAGACATTTTGAAAGTTCAAAGACCAAAATAGAACAAACCCAAAAATTTATGTGACCAAGACAGACATTTTAAAACTTACGAAAATAGTGCAAACTCGTCTAAAATGAGATTTAAATCAGAAATGTATCTGGAGATAATTGGAAACTTATAAAATGGAAATTTTTGTGCCTCAAAAGTGCGTGCCACGAATAGTATATACCTACGCATTTCCAAGAAAATAAAAAATAAAACGAAAGGTCACCAAAAGAAAACTTACCACTAAATAGTAGTGTGTTTTTTTGAATATGTTCTATATGTATGCAGAGTCTAATTACCAACAGAAAACTTACACAAGAAAACATGGCAAAGATGGGGTTACTAACCAGATTGACAGAAGATACAGTGCAAGTCCAGTCACCGTTTCTAATGGGATTCGTCGTGGAAGTGCAGGTCATGGAAGTGCAGGTCGTGGAAGTGCAGCCGGCGGCGGTGGAGAAAATGGTGGTGGCAGTAGACCTCATACAGGAGGAGGTACAGCCGTAATCCCTGTTTATGCAGCTGGTTCGGCACAAGCACGTCACCGCCAAGGTCGACCACATAATGCAGGAAATCACTATGAGAACAACATGGGGCTTCTGACAGCTGCAGTTTTGGCCGCCATGCTCATCTCTATAGAGTTTTCTGATATCAGGGCTGTCTCCATAGGGACACAAGAATATTGTTACAAACTTACATGTGCTGATTGAGGTGTGTGCTTCATCTTTCTTGTTGGACCTTCATTTCCTGTTAAAGGTCAAGAAAGGGCAAAATATTTGGCTTGCAAATGATTGTATGTACAGAGACAGAACCTCATAAAATCTTTTTCTTTTCTTTTTCTTTCTTGGGTAACCATTGTATTGTACATAGACAGTAGTCTTTTAATTGCGTCAATTAGATCATTTTCTGACAGGCATTACAA

mRNA sequence

ATGGGAAAACATGGTACCAGATACAATACAATTACAATAATACCTCATGAGGGTCGACATGGAGATGCAAATGTGATCCCAATACATATAGCTCTCGCAGGTGGAGGCGGAGGCGCAGGCAGAGGCGGAGGCGCAGGAGGAAGAGGCGGAGGTTTAGGTGGCAGCAGCCACGGAGGAGGAGGTGACAGTGGCACAGGAAATCGGCATCAAAACTACATAAGAGAGAAGCTAGCTGTTTCTATTACAATGGGAAGAAGAAAAGGGATAATATTGATTTTCTTGATGTTTTGTTCTACCATGGCCATTTCATCTACTGCTCTCCAACAACAAATCTTCCTAACAGAGTCTAATTACCAACAGAAAACTTACACAAGAAAACATGGCAAAGATGGGGTTACTAACCAGATTGACAGAAGATACAGTGCAAGTCCAGTCACCGTTTCTAATGGGATTCGTCGTGGAAGTGCAGGTCATGGAAGTGCAGGTCGTGGAAGTGCAGCCGGCGGCGGTGGAGAAAATGGTGGTGGCAGTAGACCTCATACAGGAGGAGGTACAGCCGTAATCCCTGTTTATGCAGCTGGTTCGGCACAAGCACGTCACCGCCAAGGTCGACCACATAATGCAGGAAATCACTATGAGAACAACATGGGGCTTCTGACAGCTGCAGTTTTGGCCGCCATGCTCATCTCTATAGAGTTTTCTGATATCAGGGCTGTCTCCATAGGGACACAAGAATATTGTTACAAACTTACATGTGCTGATTGAGGTGTGTGCTTCATCTTTCTTGTTGGACCTTCATTTCCTGTTAAAGGTCAAGAAAGGGCAAAATATTTGGCTTGCAAATGATTGTATGTACAGAGACAGAACCTCATAAAATCTTTTTCTTTTCTTTTTCTTTCTTGGGTAACCATTGTATTGTACATAGACAGTAGTCTTTTAATTGCGTCAATTAGATCATTTTCTGACAGGCATTACAA

Coding sequence (CDS)

ATGGGAAAACATGGTACCAGATACAATACAATTACAATAATACCTCATGAGGGTCGACATGGAGATGCAAATGTGATCCCAATACATATAGCTCTCGCAGGTGGAGGCGGAGGCGCAGGCAGAGGCGGAGGCGCAGGAGGAAGAGGCGGAGGTTTAGGTGGCAGCAGCCACGGAGGAGGAGGTGACAGTGGCACAGGAAATCGGCATCAAAACTACATAAGAGAGAAGCTAGCTGTTTCTATTACAATGGGAAGAAGAAAAGGGATAATATTGATTTTCTTGATGTTTTGTTCTACCATGGCCATTTCATCTACTGCTCTCCAACAACAAATCTTCCTAACAGAGTCTAATTACCAACAGAAAACTTACACAAGAAAACATGGCAAAGATGGGGTTACTAACCAGATTGACAGAAGATACAGTGCAAGTCCAGTCACCGTTTCTAATGGGATTCGTCGTGGAAGTGCAGGTCATGGAAGTGCAGGTCGTGGAAGTGCAGCCGGCGGCGGTGGAGAAAATGGTGGTGGCAGTAGACCTCATACAGGAGGAGGTACAGCCGTAATCCCTGTTTATGCAGCTGGTTCGGCACAAGCACGTCACCGCCAAGGTCGACCACATAATGCAGGAAATCACTATGAGAACAACATGGGGCTTCTGACAGCTGCAGTTTTGGCCGCCATGCTCATCTCTATAGAGTTTTCTGATATCAGGGCTGTCTCCATAGGGACACAAGAATATTGTTACAAACTTACATGTGCTGATTGA

Protein sequence

MGKHGTRYNTITIIPHEGRHGDANVIPIHIALAGGGGGAGRGGGAGGRGGGLGGSSHGGGGDSGTGNRHQNYIREKLAVSITMGRRKGIILIFLMFCSTMAISSTALQQQIFLTESNYQQKTYTRKHGKDGVTNQIDRRYSASPVTVSNGIRRGSAGHGSAGRGSAAGGGGENGGGSRPHTGGGTAVIPVYAAGSAQARHRQGRPHNAGNHYENNMGLLTAAVLAAMLISIEFSDIRAVSIGTQEYCYKLTCAD
Homology
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BLAST of CmUC05G103020 vs. NCBI nr
Match: XP_011655831.2 (glycine-rich protein DOT1 [Cucumis sativus] >KAE8648819.1 hypothetical protein Csa_009069 [Cucumis sativus])

HSP 1 Score: 198.7 bits (504), Expect = 5.8e-47
Identity = 119/152 (78.29%), Postives = 129/152 (84.87%), Query Frame = 0 

Query: 83  MGRRKGIILIFLMFCSTMAISSTALQQQIF--LTESNYQQKTYTRKHGKDGVTNQIDRRY 142
           MGRR+GI LIFL+FCST+AISS ALQQQIF   TESNYQQKTYT+KHGK GVTNQI+RRY
Sbjct: 1   MGRRRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRY 60

Query: 143 SASPVTVSNGIRRGS-AGHGSAGRG----SAAGGGGENGGGSRPHTGGGTAVIPVYAAGS 202
           S+S +TVSN IRRGS +G GS G G    +AA GGGEN GGSRP TGGGTAVIPVYAAGS
Sbjct: 61  SSSAITVSNVIRRGSGSGSGSGGGGGSGSAAAAGGGEN-GGSRPRTGGGTAVIPVYAAGS 120

Query: 203 AQARHRQGRPHNAGNHYENNMGLLTAAVLAAM 228
           AQA HRQGR HNAGN YENNMGLL AAVLAA+
Sbjct: 121 AQAHHRQGRAHNAGNSYENNMGLLVAAVLAAI 151

[Close]
BLAST of CmUC05G103020 vs. NCBI nr
Match: XP_008446752.1 (PREDICTED: uncharacterized protein LOC103489382 [Cucumis melo] >KAA0034650.1 uncharacterized protein E6C27_scaffold65G006690 [Cucumis melo var. makuwa] >TYK09201.1 uncharacterized protein E5676_scaffold475G001940 [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 5.8e-47
Identity = 115/144 (79.86%), Postives = 121/144 (84.03%), Query Frame = 0 

Query: 86  RKGIILIFLMFCSTMAISSTALQQQIF--LTESNYQQKTYTRKHGKDGVTNQIDRRYSAS 145
           R+GI LIFL+FCST+AISS ALQQQIF   TESNYQQKTYTRK GK GVTNQI RRYSAS
Sbjct: 3   RRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSAS 62

Query: 146 PVTVSNGIRRGSAGHGSAGRGSAAGGGGENGGGSRPHTGGGTAVIPVYAAGSAQARHRQG 205
            +TVSN IRR       A  G+AA GGGENGGGSRPHTGGGTAVIPVYAAGSAQARHRQG
Sbjct: 63  AITVSNVIRR-------ANGGAAAAGGGENGGGSRPHTGGGTAVIPVYAAGSAQARHRQG 122

Query: 206 RPHNAGNHYENNMGLLTAAVLAAM 228
           RPHNAGN YENN GLL AAVLAA+
Sbjct: 123 RPHNAGNGYENNTGLLVAAVLAAI 139

[Close]
BLAST of CmUC05G103020 vs. NCBI nr
Match: XP_038892711.1 (uncharacterized protein LOC120081693 [Benincasa hispida])

HSP 1 Score: 194.5 bits (493), Expect = 1.1e-45
Identity = 108/145 (74.48%), Postives = 117/145 (80.69%), Query Frame = 0 

Query: 83  MGRRKGIILIFLMFCSTMAISSTALQQQIFLTESNYQQKTYTRKHGKDGVTNQIDRRYSA 142
           MGRR+ + LI L+ CSTMAISS ALQQQIF TESNYQQKTYT K  KDG+TNQI RRYSA
Sbjct: 1   MGRRRRVRLILLLLCSTMAISSAALQQQIFPTESNYQQKTYTEKRSKDGITNQIARRYSA 60

Query: 143 SPVTVSNGIRRGSAGHGSAGRGSAAGGGGENGGGSRPHTGGGTAVIPVYAAGSAQARHRQ 202
           + +TVSNGI          G+GSA  GGGENGGGSRPH GGGTAVIPVYAAGSAQA HRQ
Sbjct: 61  TEITVSNGI----------GQGSAVAGGGENGGGSRPHNGGGTAVIPVYAAGSAQAHHRQ 120

Query: 203 GRPHNAGNHYENNMGLLTAAVLAAM 228
           GRPHNAGN +ENN GLL AAVLAA+
Sbjct: 121 GRPHNAGNRHENNRGLLVAAVLAAI 135

[Close]
BLAST of CmUC05G103020 vs. NCBI nr
Match: XP_023517064.1 (glycine-rich RNA-binding protein GRP1A-like [Cucurbita pepo subsp. pepo] >KAG7032020.1 hypothetical protein SDJN02_06062 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 165.2 bits (417), Expect = 7.2e-37
Identity = 98/146 (67.12%), Postives = 108/146 (73.97%), Query Frame = 0 

Query: 83  MGRRKGIILIFLMFCSTMAISSTALQQQIFLTESNYQQKTYTRKHGKDGVTNQIDRRYSA 142
           MGRR+ + L+FL+FCST+   S+ALQQQI  TESNY QKT   KHGKDGVTN+I   YSA
Sbjct: 1   MGRRRELTLMFLLFCSTIPAISSALQQQILPTESNYHQKTNAEKHGKDGVTNRISSIYSA 60

Query: 143 SPVTVSNGIRRGSAGHGSAGRGSAAGGGGENGGGSRPHT-GGGTAVIPVYAAGSAQARHR 202
             +TVS GI     GHGS      A GGGENGGG RP   GGG AVIPVYAAGSAQA HR
Sbjct: 61  RAITVSQGI-----GHGS------AAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHR 120

Query: 203 QGRPHNAGNHYENNMGLLTAAVLAAM 228
           QGR  NAGNHYENNMGLL A+VLAA+
Sbjct: 121 QGRTRNAGNHYENNMGLLVASVLAAI 135

[Close]
BLAST of CmUC05G103020 vs. NCBI nr
Match: XP_022957462.1 (glycine-rich RNA-binding protein GRP1A-like [Cucurbita moschata])

HSP 1 Score: 165.2 bits (417), Expect = 7.2e-37
Identity = 98/147 (66.67%), Postives = 109/147 (74.15%), Query Frame = 0 

Query: 83  MGRRKGIILIFLMFCSTMAISSTALQQQIFLTESNYQQKTYTRKHGKDGVTNQIDRRYSA 142
           MGRR+ + L+FL+FCST+   S+ALQQQI  TESNY QKT   KHGKDGVTN+I   YSA
Sbjct: 1   MGRRRELTLMFLLFCSTIPAISSALQQQILPTESNYHQKTNAEKHGKDGVTNRISSIYSA 60

Query: 143 SPVTVSNGIRRGSAGHGSAGRGSAAGGGGENGGGSRPHT-GGGTAVIPVYAAGSAQARHR 202
             +TVS GI     GHGS      A GGGENGGG RP   GGG AVIPVYAAGSAQA HR
Sbjct: 61  RAITVSQGI-----GHGS------AAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHR 120

Query: 203 QGRPHNAGNHYENNMGLLTAAVLAAML 229
           QGR  NAGNHYENNMGLL A+VLAA++
Sbjct: 121 QGRTRNAGNHYENNMGLLVASVLAAIV 136

[Close]
BLAST of CmUC05G103020 vs. ExPASy TrEMBL
Match: A0A0A0KUR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613600 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 2.6e-48
Identity = 115/147 (78.23%), Postives = 123/147 (83.67%), Query Frame = 0 

Query: 83  MGRRKGIILIFLMFCSTMAISSTALQQQIF--LTESNYQQKTYTRKHGKDGVTNQIDRRY 142
           MGRR+GI LIFL+FCST+AISS ALQQQIF   TESNYQQKTYT+KHGK GVTNQI+RRY
Sbjct: 1   MGRRRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRY 60

Query: 143 SASPVTVSNGIRRGSAGHGSAGRGSAAGGGGENGGGSRPHTGGGTAVIPVYAAGSAQARH 202
           S+S +TVSN IRRGS   G  G GSAA  GG   GGSRP TGGGTAVIPVYAAGSAQA H
Sbjct: 61  SSSAITVSNVIRRGSGSGGGGGSGSAAAAGGGENGGSRPRTGGGTAVIPVYAAGSAQAHH 120

Query: 203 RQGRPHNAGNHYENNMGLLTAAVLAAM 228
           RQGR HNAGN YENNMGLL AAVLAA+
Sbjct: 121 RQGRAHNAGNSYENNMGLLVAAVLAAI 147

[Close]
BLAST of CmUC05G103020 vs. ExPASy TrEMBL
Match: A0A5A7SUI0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001940 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 2.8e-47
Identity = 115/144 (79.86%), Postives = 121/144 (84.03%), Query Frame = 0 

Query: 86  RKGIILIFLMFCSTMAISSTALQQQIF--LTESNYQQKTYTRKHGKDGVTNQIDRRYSAS 145
           R+GI LIFL+FCST+AISS ALQQQIF   TESNYQQKTYTRK GK GVTNQI RRYSAS
Sbjct: 3   RRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSAS 62

Query: 146 PVTVSNGIRRGSAGHGSAGRGSAAGGGGENGGGSRPHTGGGTAVIPVYAAGSAQARHRQG 205
            +TVSN IRR       A  G+AA GGGENGGGSRPHTGGGTAVIPVYAAGSAQARHRQG
Sbjct: 63  AITVSNVIRR-------ANGGAAAAGGGENGGGSRPHTGGGTAVIPVYAAGSAQARHRQG 122

Query: 206 RPHNAGNHYENNMGLLTAAVLAAM 228
           RPHNAGN YENN GLL AAVLAA+
Sbjct: 123 RPHNAGNGYENNTGLLVAAVLAAI 139

[Close]
BLAST of CmUC05G103020 vs. ExPASy TrEMBL
Match: A0A1S3BFU8 (uncharacterized protein LOC103489382 OS=Cucumis melo OX=3656 GN=LOC103489382 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 2.8e-47
Identity = 115/144 (79.86%), Postives = 121/144 (84.03%), Query Frame = 0 

Query: 86  RKGIILIFLMFCSTMAISSTALQQQIF--LTESNYQQKTYTRKHGKDGVTNQIDRRYSAS 145
           R+GI LIFL+FCST+AISS ALQQQIF   TESNYQQKTYTRK GK GVTNQI RRYSAS
Sbjct: 3   RRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTRKQGKYGVTNQISRRYSAS 62

Query: 146 PVTVSNGIRRGSAGHGSAGRGSAAGGGGENGGGSRPHTGGGTAVIPVYAAGSAQARHRQG 205
            +TVSN IRR       A  G+AA GGGENGGGSRPHTGGGTAVIPVYAAGSAQARHRQG
Sbjct: 63  AITVSNVIRR-------ANGGAAAAGGGENGGGSRPHTGGGTAVIPVYAAGSAQARHRQG 122

Query: 206 RPHNAGNHYENNMGLLTAAVLAAM 228
           RPHNAGN YENN GLL AAVLAA+
Sbjct: 123 RPHNAGNGYENNTGLLVAAVLAAI 139

[Close]
BLAST of CmUC05G103020 vs. ExPASy TrEMBL
Match: A0A6J1GZ71 (glycine-rich RNA-binding protein GRP1A-like OS=Cucurbita moschata OX=3662 GN=LOC111458855 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 3.5e-37
Identity = 98/147 (66.67%), Postives = 109/147 (74.15%), Query Frame = 0 

Query: 83  MGRRKGIILIFLMFCSTMAISSTALQQQIFLTESNYQQKTYTRKHGKDGVTNQIDRRYSA 142
           MGRR+ + L+FL+FCST+   S+ALQQQI  TESNY QKT   KHGKDGVTN+I   YSA
Sbjct: 1   MGRRRELTLMFLLFCSTIPAISSALQQQILPTESNYHQKTNAEKHGKDGVTNRISSIYSA 60

Query: 143 SPVTVSNGIRRGSAGHGSAGRGSAAGGGGENGGGSRPHT-GGGTAVIPVYAAGSAQARHR 202
             +TVS GI     GHGS      A GGGENGGG RP   GGG AVIPVYAAGSAQA HR
Sbjct: 61  RAITVSQGI-----GHGS------AAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHR 120

Query: 203 QGRPHNAGNHYENNMGLLTAAVLAAML 229
           QGR  NAGNHYENNMGLL A+VLAA++
Sbjct: 121 QGRTRNAGNHYENNMGLLVASVLAAIV 136

[Close]
BLAST of CmUC05G103020 vs. ExPASy TrEMBL
Match: A0A6J1JB47 (uncharacterized protein LOC111485159 OS=Cucurbita maxima OX=3661 GN=LOC111485159 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 2.9e-36
Identity = 96/146 (65.75%), Postives = 107/146 (73.29%), Query Frame = 0 

Query: 83  MGRRKGIILIFLMFCSTMAISSTALQQQIFLTESNYQQKTYTRKHGKDGVTNQIDRRYSA 142
           MGRR+ + L+FL+FCST+   S+A QQQI  TE NY QKT   KHG+DGVTN+I   YSA
Sbjct: 1   MGRRRELSLMFLLFCSTIPAISSARQQQILPTEPNYHQKTNAEKHGQDGVTNRISSIYSA 60

Query: 143 SPVTVSNGIRRGSAGHGSAGRGSAAGGGGENGGGSRPHT-GGGTAVIPVYAAGSAQARHR 202
             +TVS GI     GHGS      A GGGENGGG RP   GGG AVIPVYAAGSAQA HR
Sbjct: 61  RAITVSQGI-----GHGS------AAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHR 120

Query: 203 QGRPHNAGNHYENNMGLLTAAVLAAM 228
           QGRP NAGNHYENNMGLL A+VLAA+
Sbjct: 121 QGRPRNAGNHYENNMGLLVASVLAAI 135

The following BLAST results are available for this feature:
BLAST of CmUC05G103020 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011655831.25.8e-4778.29glycine-rich protein DOT1 [Cucumis sativus] >KAE8648819.1 hypothetical protein C... [more]
XP_008446752.15.8e-4779.86PREDICTED: uncharacterized protein LOC103489382 [Cucumis melo] >KAA0034650.1 unc... [more]
XP_038892711.11.1e-4574.48uncharacterized protein LOC120081693 [Benincasa hispida][more]
XP_023517064.17.2e-3767.12glycine-rich RNA-binding protein GRP1A-like [Cucurbita pepo subsp. pepo] >KAG703... [more]
XP_022957462.17.2e-3766.67glycine-rich RNA-binding protein GRP1A-like [Cucurbita moschata][more]
BLAST of CmUC05G103020 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC05G103020 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUR62.6e-4878.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613600 PE=4 SV=1[more]
A0A5A7SUI02.8e-4779.86Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BFU82.8e-4779.86uncharacterized protein LOC103489382 OS=Cucumis melo OX=3656 GN=LOC103489382 PE=... [more]
A0A6J1GZ713.5e-3766.67glycine-rich RNA-binding protein GRP1A-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1JB472.9e-3665.75uncharacterized protein LOC111485159 OS=Cucurbita maxima OX=3661 GN=LOC111485159... [more]
BLAST of CmUC05G103020 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..183
NoneNo IPR availablePANTHERPTHR36245:SF2PROTEIN, PUTATIVE-RELATEDcoord: 83..231
NoneNo IPR availablePANTHERPTHR36245GLYCINE-RICH PROTEIN DOT1-LIKEcoord: 83..231

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC05G103020.1CmUC05G103020.1mRNA