CmUC05G102290 (gene) Watermelon (USVL531) v1

Overview
NameCmUC05G102290
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr05: 31159350 .. 31161108 (+)
RNA-Seq ExpressionCmUC05G102290
SyntenyCmUC05G102290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACATCACTGTATAACAAATTTGTTCGAAGGATAACCTGGCAGACTTATTTACAAAATCATTACCAACCGCAACTTTTGAAAAATTGGTGCAAAACATTGGAATGCGGCGACTCAGTGATCTAAAATGATGTTCCTATGAGGGGAGCAAATGTATTATATTCTTTTAGAAGTATTAGATTGTATAAAATATGTACTATTTTTACTTCACTAGGATTTTTTTCCCATTGGGTTTTTTTCTGGTAAGGTTTTAACGAGACATATTTTATATATATAATGGGTATCTAAGGGGGAGTATTATAAATATTAAAGAAAATTAGATGTACATTATATAAATATGCTTAGTAGCAAAAGGCCATGTATACTTTATGGCCATGAAATGCCACTACATGATATTGTAATACGCACATTGGAGAGAAAATAAGAAAAATGATTGGTGTTGAGAAATTTTATAAAATTCCAATTTCTTTATTTTAATTTATTTTATTTAATTTAGTTGTTTTAATTACTTCTATATTATTTAATTATTTAATGTTTTCGTGCTTCCGTCTTTTCGTCATTTTGCTCCTCAATTTTATAACAAAATCATTATTATGATTATTATGTATTAATAATTTAATCCCATCAAAACTTTCATCCACCCGCTCCCTCCCATTAACAGCCACAGCACCGCCGTGGCTTGTCGTTCCTGCCCGACGCCGTCACCCCGAGCCTTACTTTTCTCCATATGAATTCCCGGCGCACAGCATACCCGTTCTCCGCCGTCTTTATCCAGGCCATTGGAAGCCCGATTCAAGCTTTAGTCTAACGGATTTAATTAATCTGGGCTTATTTGGTAAAGGCCCAAATTAGTTTCAAGCACTATTTTGTTTCGGCTCGATACGAAATTGAGTCAGTTCCGAGATGCCTCTCTCTCGCTAACATTTCTCTTCTCTGTCTCTCTGTCTCTCTGTCTCTCTCTCTCTGCACCTCCGCGTTCTGAATGAGATTTTCCGATCGGGTGAGTTATTGTTTAGTTTCAATCTCTTTCTTGTTGTTCGTCAAGGAGACCGGTTTCGCGTAGCATGGTAAATGTATTTGCTCTTGTTATTTATTTATTGCATCGTTTTTGCTTTTTAGTTTTGTTCAAGAGGCATTATAAATTTTGGTTGGTGTTTGAAATTGTGCTTTTATATTGTTCTCTATGTATGAATTAAGTTATTTTTTCGGATTTCATTCCGTTTGATGGCGACCAAACGAATGGTGGAATTAGGTAACTCTAATTACATATAGTTACTAGAGATAGTTGAAGCGAATTTCCTTTTAGGGTTTAGGGTTTAGGAGGGGAAGAGAGATTAATTTTGGCATCTGGAACTGGCTGAAAGAGGAGATATTGAGCCATAGGGATCTTAGGGCTTGGGTAAGTGTTTTCTTGAGATTGTTTGGGCTCAGGTGCAGGAAAGAATTCTAAGTTGAAATGGGGCAAAAATAAAAATTACGAGCTTATGGCCTTTTCTGTGGTTGAGATTGTTAAAAATGACAATTTGTGCAGAGGACATAATTGGATCTCTTTCCCTTCATCTTCTTCAGTTGGGCTGAAAATCGTGAAACACAAGAGCAAGAGGAAGGGGAAAACACGCAGACATAGGGAGACTAAAAAAAAGTTCCAGCCGTGATTCATGTTTTTGGAAGTTTCGATTCTGAGGCTGTTGTGGTCTTGTTTTAGGAGGCTGGTAGCGTAGCCCGTCAGGGGTATCAGTTCAATGGGGGGTTTTGA

mRNA sequence

ATGGCGACATCACTGTATAACAAATTTGTTCGAAGGATAACCTGGCAGACTTATTTACAAAATCATTACCAACCGCAACTTTTGAAAAATTGGTGCAAAACATTGGAATGCGGCGACTCACCACAGCACCGCCGTGGCTTGTCGTTCCTGCCCGACGCCGTCACCCCGAGCCTTACTTTTCTCCATATGAATTCCCGGCGCACAGCATACCCGTTCTCCGCCGTCTTTATCCAGGCCATTGGAAGCCCGATTCAAGCTTTAGGTTTAGGGTTTAGGAGGGGAAGAGAGATTAATTTTGGCATCTGGAACTGGCTGAAAGAGGAGATATTGAGCCATAGGGATCTTAGGGCTTGGGAGGCTGGTAGCGTAGCCCGTCAGGGGTATCAGTTCAATGGGGGGTTTTGA

Coding sequence (CDS)

ATGGCGACATCACTGTATAACAAATTTGTTCGAAGGATAACCTGGCAGACTTATTTACAAAATCATTACCAACCGCAACTTTTGAAAAATTGGTGCAAAACATTGGAATGCGGCGACTCACCACAGCACCGCCGTGGCTTGTCGTTCCTGCCCGACGCCGTCACCCCGAGCCTTACTTTTCTCCATATGAATTCCCGGCGCACAGCATACCCGTTCTCCGCCGTCTTTATCCAGGCCATTGGAAGCCCGATTCAAGCTTTAGGTTTAGGGTTTAGGAGGGGAAGAGAGATTAATTTTGGCATCTGGAACTGGCTGAAAGAGGAGATATTGAGCCATAGGGATCTTAGGGCTTGGGAGGCTGGTAGCGTAGCCCGTCAGGGGTATCAGTTCAATGGGGGGTTTTGA

Protein sequence

MATSLYNKFVRRITWQTYLQNHYQPQLLKNWCKTLECGDSPQHRRGLSFLPDAVTPSLTFLHMNSRRTAYPFSAVFIQAIGSPIQALGLGFRRGREINFGIWNWLKEEILSHRDLRAWEAGSVARQGYQFNGGF
Homology
[Close]
BLAST of CmUC05G102290 vs. NCBI nr
Match: WP_217833174.1 (hypothetical protein [Synechococcus sp. PCC 7002])

HSP 1 Score: 88.2 bits (217), Expect = 5.9e-14
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0 

Query: 1   MATSLYNKFVRRITWQTYLQNHYQPQLLKNWCKTLECGDS 41
           MATSLYNKFVRRITWQTYLQNHYQPQ LKNWC+TLECGDS
Sbjct: 166 MATSLYNKFVRRITWQTYLQNHYQPQPLKNWCRTLECGDS 205

The following BLAST results are available for this feature:
BLAST of CmUC05G102290 vs. NCBI nr
Match NameE-valueIdentityDescription
WP_217833174.15.9e-1495.00hypothetical protein [Synechococcus sp. PCC 7002][more]
BLAST of CmUC05G102290 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC05G102290 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC05G102290 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC05G102290.1CmUC05G102290.1mRNA