CmUC05G101270 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC05G101270
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	protein ROOT INITIATION DEFECTIVE 3
Location	CmU531Chr05: 30328915 .. 30334783 (-)
RNA-Seq Expression	CmUC05G101270
Synteny	CmUC05G101270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCATAAGAGAAGGGAAAGAAAAACCCATCTTCTTATTCAGCCCCTTTGCCGCCGACAACCCTCCCTTCGGTCTTCTTCGCCGGCGACCTCACCCCCGAGCAGCGGGGTCGACCACGGACTCCGAAGACCAGTCCCGGCGCATTAGATGATTCAGACCAATGTGCTCTTGCCCCACATTTGACGGCGGAGTCAGCTGCAACATAAACACCCAGTTTGAACAAGTTTAGAAACATCGTTTCTTCTTCGTGTGAGACTGCAACGTGAACAACAGGTTGTGCATCACGTTTTTGACGACTGGGTGTCTTGCAGCAGCGTTTTCGGCTTGGGGTGTAAGCTTTCGGCTGTTACCCACACTCTGTTTGGCTTCGAATTTGTGTACCCATAACGTTTAAGGTCCAAATCTGTAAGTTTGGACGTTTTCGGACACCAACCAGCAAGGATTATTTGCCTTTTCGGTAAGATTCGGTAAGGATAACTGCTTTAATTTCTTATTTTGAATTGGATTTAAGTATTCAAATGTTATTCTGAACTCTTGGAACTCCTTTGTTGTTGTGTTTGGGTAAATTTCTAAGTATTTGATCAAGCTTCAGTAAGGTTGAACATATTTCAGACTAGTTCAGACTCGATTAAAGCGTCTTAGATCAGTCTTTGATTCGTTAAAGTTTGTTGGTCGTAGTTTTGGCTAGTTCGAAGTGACTAATTAAGGTTTTTGGTGGACTTCGGATAAGAATATTACTGATGGCAAATAACTCGGTGTCAATTAACGTTTTTGAACTAAGTTCTAACACTTAAATGTTATGTTTATTGTCTAGGCTTTCTAAAGGTTGATGTTGGTTCAAGGAAGTGGATTTCCGGATTGAGAATTATAGGATTGTCGATTGAGGTAAGTAGTTTCCAAGTCCCTTCCACAAATGTAAATTTGATAAAGGTTGAAAGTTTGTATTGGATGTTTGAAAATATGTCTTCTACCATTTGAAGCCGATTGAATTTGTTTTGGATGTTTTAAACATTTTCCTATTAGGAAATATGTTTTATGTGATTTGAGAATTCACCGGAAGTATTTTGTGTATTTTTAGTTGATTTTGTCAAATATTGTTTTGAATGATGGCTGGAACTGATACTATTTTGAATGATGGTTGGAAGTGTTTTGATTGATTTTGAATTGAAAGTATTTATGTTTTGGTTTTGGTTATTTCTGAAAGCTTTTGAAAGGTTTGAGTGGTTTGATTTGATGAGTTCTTCTGTCGAAATTGCTATTTGAAACTACATGTTTTGTTTCAAATGTTTTTGACCGATTCATCTAGGGCTATTTGGGTATGCTAGTTTTTGTGTTTTGGGGATTGTATGGTATTTTGTTGTAGCCAATTTTGGAATTGACGGTTAAGACACATTTTTGTGGTTTGGCATTCTTTGGAATGAAGATTCATATGTGTGTTACACTCACATGGCCTCACGCTTAAGTAATTTATGCTATTTGGTTGGTTGTCATTCGACATGTTCTACTGGTGATACCGATGGGTAGCTATTTCTGTTGGGCTACTTCAACTATGCATGTTTCCTACTCTGTATTTGAAAGTTTCGAATTACTGAAAGCTTTATTACTTCAAGTATTGACTGATTCAAAGTTTTGTTTGATTGAATGTATTGACTGATTGAAAGCTTTGTATTTGACAATAATGAAATATTAGCATTTTTAGGAAAAAGTATGAAAGTTCTGTTTATTAAAGGTTTTTAAAGTTTATTCAAATGTTTTGGTTTTTTTTTTTTGAAAGACTAGTTGAAAGTTTCAGCTTCAAATGTTTAGGTTTGAAAGGTTGGCTTGAAAGATTTTTATTTCGAAGGTACAGTTTTGTTGCAAAGTTTTAACTGAAAGTTTTGAGATGATTTGTATTTCTATTTTCAAATGTTTTGAAAGAAAATGAATTTTCAAAGCTGGATATGGGAACTGCTTATTGAGCATTTTTTTACTCATCTTTGCTTTTTCAAAATGCTTTTAGATGAAGGATCAGTTGATAATTCTGAACGAAGTGAGGTTTGGCATTCTGGCACGATATTTTTCTTAGGATTTGATAGTTTGACTTAGAAATTGTTTGTGATAAGTTGATTTCACTGAAATGTGTAAGTTGTAAAAGCTTTTAATTGTTATGTTTTCCGCATTTTTGTTATAATAGCTGTTTTGGAAAATACGGGCTGTTATACAGTCTCGCTGCCACCGTTTCATTCGACACTAGACGCCTTTGTCGCTGCAGCACTCGCCATAAATATTCAAAGGCAATTGAAACTCAAACCATCTCTCAAGCTCTCAAGCCAGAATGGTGCTATTGATTGCTTCTTCGTCCATTGATTCGGGGATTGGTTGCTGGGACCTTCAAACGGGTGCGGAACAACTACGTTACAAGTCTTGTGCTTCTCCGGCACATGGTCTTGTTTGTGTTGGTGAAAAATTTCTTGCATGCTCTCAGCTCCGCGATCCCGCTGCCACAGCAGGCTCTGTTCTCTACTGGTCTTGGTGTAAGGTACAAATGTAACAAACTCCATCATCTGTTCCTCAATAGTGTGCTTAATTAATTGTTCTCCCTGCAGCCTCAAGTAGAAGTTAAGAGCTTTCCGGCTGAACCATTGATGGCCTTGGCTTCCAACAATGAGGGTACTTATATCGTTGGTGGTGGTTTCTCTGGAGATATATACTTCTGGGAGGTAAAGTTTGATTCAATAATATATGCTGTGGCATTGAACTCTAAAATTCCCTGCCTGTCGAAGATTATATTCATCCTCCAATTCTATTAATTGTCACAGTATTTGGTTTTGGTATAATATGGCATGCTCGTTGTTGCAGGTTTTGAGTGGTAGACTGCTTAAGAAGTGGCATGCTCATTATAGGGCAGTTACTTGCCTCTTATTCTCTGAAGATGACTCCCTGCTAATTTCTGGTTCTGAAGATGGCTGCATTAGAGTTTGGTCCCTGCTAACGTATAAAATTCCATCCTTTGGCCGCGTGTCTGTTTAGGTTTTATTGTTACTTGTAGAAATTCTTCTTACAAACATGTTTGTTCCAGGGTATTTGATGATGGATGGCATAGCGAATCAAAACATTTGTATGAACATAGTTTCACTGGGCATAATCTACCCGTTACCGATATTGCTGTTGGCTATGGAGGATCAAATGCTATTATAATCTCTTCCTCTGTGGATCGTACTTGTAAGGTTTGGCACTCTATTGAATATAACACTACTATGTTGATAATGTATTTTTGTGATGATGTGGCCATGTAGTTTGATGATGGATGGTAATTAGTTTTACAATTTCTTTGGCTTTAATTTATTTCTGTTTGCTAGCTAAGTACCTGAATTTGGCTGTCTAATTGGATTGACTTGGTAAATCGCCCTTTCTTGCAAGTACTGCAGCTTGACATTTAAGGTTTATTTACATTTCTTCTAGGATGTTAGAAACACATACAGACATAATTATATAGACTAAGTTTGTAATTTTGAAAGTTCAAAGACCAAACAGACGCAAACTTCAAAGTTGAGGACTAAATTTGTAACGTTACCTAACCATCATTATTTGGCCTAGTGGTAAAAAAGGAGACATAGTTTTAATAAATGACTAAGAGGTCAAGGGTTCAATCCATGGTGGCCACCTATCTAGGAATTAATTTCCTATGAGTTTCCTTGACACCCAAATGTTGTAGGGTCAGGCGGGTCATCCCGTGAGATTAGTCGAGGTGCGCGTAAGCTGGCCCGGACACTCATGGATATCAAAAAAAAAAAAAAATTTGTAACGTTACCTATAGAAAGAATTGGAATGGACAATGTATGGGAGGATGAGTTGGCAACTTGGCATACGAATATATAGTGTAGACAGATGGATAGAATTATCCAGAGACGGTTTACATCAATATGCATGCCCTTCTATGATTTTCGTGTTTTAATAGTGATGTGGATATGTCATATATCAAACATGTTTCTTTATGATGTATCGCCAATGAGTAATGACTACTTTCCTATCCTAACTTCTTTCATATCGAATTTTCTTCTGATGAGTCATTTGTGGTACGTTAACTTGGCTTTTGTAGGTGTGGAGCTTATCTAAGGGGAAATTATTAAGAAATATCATATTTCCTTCCATCATTGATGCAATTGCATTGGATCCTGCCGAACATGTCTTCTATGCTGGTGGTAGAGATGGGAAGATCTACACTGCTGCGCTTAATGCTAAATGCCCAGCCAGCAGTGACTACGGATTGCACATTCTCGGCTCATTATCAAATCAAAGGTCTGTATTTATTTCTTTGCAACTTTCATTAATATATCTTACAGTTAACTATCAAAGATTAAGTTTTCGTCTAAACTTGTTTGCCCTTTCTGGTTTCTAGAATCTTCTCTTTGTTCCATGCAATATATGGTAGATTGACTAATGAGATTATGCAATGAATTGTTGAGGAATTTCAAGTTGCTACTAGTTTGGTGCACGAGCAGTAAGGGTATTTCTAATAGTGTCTTGATTTCTTAAGAACTAGGAACTAGTATTCTACTTCCAAGTTGATAATATTTGTGTCTAGCATTGATAAAAATCCACTTTATGGTTTATTCAAAGAAACTGGACATAGTTTTATATGTATACAGGTTTTAATGCAGGAAATTATCTCTCTTTATGAATATGCTATATTGCCTAACTTATTGTGCTCTTGTATTTTAACTAGCAAGTCTGTTACTTCCTTGGCATTCTGCTCAAGTGGTAATTTGTTGATATCCGGATCTGAGGATGGAGCAATAAGAGTTTGGGATACAAGAACCAATAATATTATTCGTGTATTCAGACATTCAAAAGGTACTAAACCATTCAAATTTTATTACTTCGATAAGTATCTATAAAGATGCATTTTGTTAGCATTAATTTTATTTATTGAATAAATACTTCCTTTCAAGTTGCTTTTTATTCTCAATTTTAAGTTTTAACCTTAGCTAAGGCTTAGGGCACATCTTTCATTGTTTATGCGAGATTGGTTTTTCCTCTGCTTTGTAATTCTAATCGTTAGTGATTGGAGGATGGTATATTCAAATATAAAAAAATTATGTTTTGAAGCTTGATACTCTTTTGTGTTCCTTTCTTTCTTAATCTCCCAATTTTATGAACTTTCTTTATAATTTTATTTCCAAGTACATTCATTTATATTTTTTCTTTTTAAATATGTACATTATTCAGTTATATAATTTTCTGCATATTAAGTTCCCTAGCTAGTGCAGTTAGCTTTTGCTGAATTCATGACCAGCATTTTTATTATATAATCTCAATGCAAATACACTGATGTTCTGCTCTTGTGCAGGTCCTATAAATAATATACTTGTTGTTCGACAACAGCTCCTTCCTAAACCACAGTCAACTTCCCAAGGTTCTCTGAGAAAGCATCGGTCACTGTTACCTCCTGCCCTCGCGAAATTTGAGAACTCAAAGGACGAGGATGAAGACACTGGTGTTATCATTGGTCCATCAGGTCCTCTCAAGGAATTTATGGGGCTTTCCCCCCTTAGTTCTCACGTGATGGATAATCAAATCACAGAACTTCAGGTGCTTGCTCTTGTTCCGTCCCCCTTCCATGTGGTTCTAAGACTCCATTTTTGTTCTGGGATAGGCATTTACACAATATTTGTGATGACCCATATTTCTCTGCACATAAAACTTGTACTAATATGCGGTTTTCTCTACTTCAGCAACAGGGTTCTGCTGCCACGGGAATGGAGTTGGAAAGACTTAAGTATGATCGTGAAAAATCAGTTCAAATGCTACAACATTGGAGAAAAATGTACGATAATTTACATCAATTTTGTGTTAATGAGCTTCTGGATGGCGATCAAACTAAAATTTGA

mRNA sequence

GGCATAAGAGAAGGGAAAGAAAAACCCATCTTCTTATTCAGCCCCTTTGCCGCCGACAACCCTCCCTTCGGTCTTCTTCGCCGGCGACCTCACCCCCGAGCAGCGGGGTCGACCACGGACTCCGAAGACCAGTCCCGGCGCATTAGATGATTCAGACCAATGTGCTCTTGCCCCACATTTGACGGCGGAGTCAGCTGCAACATAAACACCCAGTTTGAACAAGTTTAGAAACATCGTTTCTTCTTCGTGTGAGACTGCAACGTGAACAACAGGTTGTGCATCACGTTTTTGACGACTGGGTGTCTTGCAGCAGCGTTTTCGGCTTGGGGTGTAAGCTTTCGGCTGTTACCCACACTCTGTTTGGCTTCGAATTTGTGTACCCATAACGTTTAAGGTCCAAATCTGTAAGTTTGGACGTTTTCGGACACCAACCAGCAAGGATTATTTGCCTTTTCGGTAAGATTCGGCTTTCTAAAGGTTGATGTTGGTTCAAGGAAGTGGATTTCCGGATTGAGAATTATAGGATTGTCGATTGAGCTGTTTTGGAAAATACGGGCTGTTATACAGTCTCGCTGCCACCGTTTCATTCGACACTAGACGCCTTTGTCGCTGCAGCACTCGCCATAAATATTCAAAGGCAATTGAAACTCAAACCATCTCTCAAGCTCTCAAGCCAGAATGGTGCTATTGATTGCTTCTTCGTCCATTGATTCGGGGATTGGTTGCTGGGACCTTCAAACGGGTGCGGAACAACTACGTTACAAGTCTTGTGCTTCTCCGGCACATGGTCTTGTTTGTGTTGGTGAAAAATTTCTTGCATGCTCTCAGCTCCGCGATCCCGCTGCCACAGCAGGCTCTGTTCTCTACTGGTCTTGGTGTAAGCCTCAAGTAGAAGTTAAGAGCTTTCCGGCTGAACCATTGATGGCCTTGGCTTCCAACAATGAGGGTACTTATATCGTTGGTGGTGGTTTCTCTGGAGATATATACTTCTGGGAGGTTTTGAGTGGTAGACTGCTTAAGAAGTGGCATGCTCATTATAGGGCAGTTACTTGCCTCTTATTCTCTGAAGATGACTCCCTGCTAATTTCTGGTTCTGAAGATGGCTGCATTAGAGTTTGGTCCCTGCTAACGGTATTTGATGATGGATGGCATAGCGAATCAAAACATTTGTATGAACATAGTTTCACTGGGCATAATCTACCCGTTACCGATATTGCTGTTGGCTATGGAGGATCAAATGCTATTATAATCTCTTCCTCTGTGGATCGTACTTGTAAGGTGTGGAGCTTATCTAAGGGGAAATTATTAAGAAATATCATATTTCCTTCCATCATTGATGCAATTGCATTGGATCCTGCCGAACATGTCTTCTATGCTGGTGGTAGAGATGGGAAGATCTACACTGCTGCGCTTAATGCTAAATGCCCAGCCAGCAGTGACTACGGATTGCACATTCTCGGCTCATTATCAAATCAAAGGTCTGTTTTAATGCAGGAAATTATCTCTCTTTATGAATATGCTATATTGCCTAACTTATTGTGCTCTTGTATTTTAACTAGCAAGTCTGTTACTTCCTTGGCATTCTGCTCAAGTGGTAATTTGTTGATATCCGGATCTGAGGATGGAGCAATAAGAGTTTGGGATACAAGAACCAATAATATTATTCGTGTATTCAGACATTCAAAAGGTACTAAACCATTCAAATTTTATTACTTCGATAAGGCACATCTTTCATTGTTTATGCGAGATTGGTTTTTCCTCTGCTTTGTAATTCTAATCGTTAGTCCTATAAATAATATACTTGTTGTTCGACAACAGCTCCTTCCTAAACCACAGTCAACTTCCCAAGGTTCTCTGAGAAAGCATCGGTCACTGTTACCTCCTGCCCTCGCGAAATTTGAGAACTCAAAGGACGAGGATGAAGACACTGGTGTTATCATTGGTCCATCAGGTCCTCTCAAGGAATTTATGGGGCTTTCCCCCCTTAGTTCTCACGTGATGGATAATCAAATCACAGAACTTCAGGTGCTTGCTCTTGTTCCGTCCCCCTTCCATCAACAGGGTTCTGCTGCCACGGGAATGGAGTTGGAAAGACTTAAGTATGATCGTGAAAAATCAGTTCAAATGCTACAACATTGGAGAAAAATGTACGATAATTTACATCAATTTTGTGTTAATGAGCTTCTGGATGGCGATCAAACTAAAATTTGA

Coding sequence (CDS)

ATGGTGCTATTGATTGCTTCTTCGTCCATTGATTCGGGGATTGGTTGCTGGGACCTTCAAACGGGTGCGGAACAACTACGTTACAAGTCTTGTGCTTCTCCGGCACATGGTCTTGTTTGTGTTGGTGAAAAATTTCTTGCATGCTCTCAGCTCCGCGATCCCGCTGCCACAGCAGGCTCTGTTCTCTACTGGTCTTGGTGTAAGCCTCAAGTAGAAGTTAAGAGCTTTCCGGCTGAACCATTGATGGCCTTGGCTTCCAACAATGAGGGTACTTATATCGTTGGTGGTGGTTTCTCTGGAGATATATACTTCTGGGAGGTTTTGAGTGGTAGACTGCTTAAGAAGTGGCATGCTCATTATAGGGCAGTTACTTGCCTCTTATTCTCTGAAGATGACTCCCTGCTAATTTCTGGTTCTGAAGATGGCTGCATTAGAGTTTGGTCCCTGCTAACGGTATTTGATGATGGATGGCATAGCGAATCAAAACATTTGTATGAACATAGTTTCACTGGGCATAATCTACCCGTTACCGATATTGCTGTTGGCTATGGAGGATCAAATGCTATTATAATCTCTTCCTCTGTGGATCGTACTTGTAAGGTGTGGAGCTTATCTAAGGGGAAATTATTAAGAAATATCATATTTCCTTCCATCATTGATGCAATTGCATTGGATCCTGCCGAACATGTCTTCTATGCTGGTGGTAGAGATGGGAAGATCTACACTGCTGCGCTTAATGCTAAATGCCCAGCCAGCAGTGACTACGGATTGCACATTCTCGGCTCATTATCAAATCAAAGGTCTGTTTTAATGCAGGAAATTATCTCTCTTTATGAATATGCTATATTGCCTAACTTATTGTGCTCTTGTATTTTAACTAGCAAGTCTGTTACTTCCTTGGCATTCTGCTCAAGTGGTAATTTGTTGATATCCGGATCTGAGGATGGAGCAATAAGAGTTTGGGATACAAGAACCAATAATATTATTCGTGTATTCAGACATTCAAAAGGTACTAAACCATTCAAATTTTATTACTTCGATAAGGCACATCTTTCATTGTTTATGCGAGATTGGTTTTTCCTCTGCTTTGTAATTCTAATCGTTAGTCCTATAAATAATATACTTGTTGTTCGACAACAGCTCCTTCCTAAACCACAGTCAACTTCCCAAGGTTCTCTGAGAAAGCATCGGTCACTGTTACCTCCTGCCCTCGCGAAATTTGAGAACTCAAAGGACGAGGATGAAGACACTGGTGTTATCATTGGTCCATCAGGTCCTCTCAAGGAATTTATGGGGCTTTCCCCCCTTAGTTCTCACGTGATGGATAATCAAATCACAGAACTTCAGGTGCTTGCTCTTGTTCCGTCCCCCTTCCATCAACAGGGTTCTGCTGCCACGGGAATGGAGTTGGAAAGACTTAAGTATGATCGTGAAAAATCAGTTCAAATGCTACAACATTGGAGAAAAATGTACGATAATTTACATCAATTTTGTGTTAATGAGCTTCTGGATGGCGATCAAACTAAAATTTGA

Protein sequence

MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGSVLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHYRAVTCLLFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYEHSFTGHNLPVTDIAVGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKIYTAALNAKCPASSDYGLHILGSLSNQRSVLMQEIISLYEYAILPNLLCSCILTSKSVTSLAFCSSGNLLISGSEDGAIRVWDTRTNNIIRVFRHSKGTKPFKFYYFDKAHLSLFMRDWFFLCFVILIVSPINNILVVRQQLLPKPQSTSQGSLRKHRSLLPPALAKFENSKDEDEDTGVIIGPSGPLKEFMGLSPLSSHVMDNQITELQVLALVPSPFHQQGSAATGMELERLKYDREKSVQMLQHWRKMYDNLHQFCVNELLDGDQTKI

Homology

[Close]

BLAST of CmUC05G101270 vs. NCBI nr
Match: XP_038898957.1 (protein ROOT INITIATION DEFECTIVE 3 [Benincasa hispida])

HSP 1 Score: 795.4 bits (2053), Expect = 2.8e-226
Identity = 401/509 (78.78%), Postives = 419/509 (82.32%), Query Frame = 0


Query: 1   MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGS 60
           MVL++ASSSIDSGIGCWDL TGAEQLRYKSCASPAHGLVCVGE+FLACSQLRDPAATAGS
Sbjct: 1   MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPAHGLVCVGERFLACSQLRDPAATAGS 60

Query: 61  VLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHY 120
           VLYWSWCKPQVEVKSFPAEP+MALASN+EGTYIVGGG SGDIY WEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWCKPQVEVKSFPAEPIMALASNDEGTYIVGGGLSGDIYLWEVLSGRLLKKWHAHY 120

Query: 121 RAVTCLLFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYEHSFTGHNLPVTDIA 180
           RAVTCL+FSEDDSLLISGSEDGCIRVW+LLTVFDDGW  E+KHLYEHSFTGHNLPVTDI 
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWALLTVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKI 240
           VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIID IALDP EHVFY GGRDGKI
Sbjct: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDVIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKCPASSDYGLHILGSLSNQRSVLMQEIISLYEYAILPNLLCSCILTSKSVTSL 300
           YTAALNAKCP++ DYGLHILGSLSNQ                           SKSVT+L
Sbjct: 241 YTAALNAKCPSTGDYGLHILGSLSNQ---------------------------SKSVTAL 300

Query: 301 AFCSSGNLLISGSEDGAIRVWDTRTNNIIRVFRHSKGTKPFKFYYFDKAHLSLFMRDWFF 360
           A+CSSGNLLISGSEDGAIRVWDTRTNN+IRVFRHSKG                       
Sbjct: 301 AYCSSGNLLISGSEDGAIRVWDTRTNNVIRVFRHSKG----------------------- 360

Query: 361 LCFVILIVSPINNILVVRQQLLPKPQSTSQGSLRKHRSLLPPALAKFENSKDEDEDTGVI 420
                    P+NNIL+VRQQ+LPK QSTSQG LRKHRSLLPPALAKFENSKDEDEDTGVI
Sbjct: 361 ---------PVNNILLVRQQVLPKSQSTSQGFLRKHRSLLPPALAKFENSKDEDEDTGVI 420

Query: 421 IGPSGPLKEFMGLSPLSSHVMDNQITELQVLALVPSPFHQQGSAATGMELERLKYDREKS 480
           IGP+G  KE MG   LSSHVMDNQITELQ          QQGSAA GMELERLKYD  KS
Sbjct: 421 IGPTGLPKESMGFPALSSHVMDNQITELQ----------QQGSAANGMELERLKYDCGKS 440

Query: 481 VQMLQHWRKMYDNLHQFCVNELLDGDQTK 510
           +QMLQHWRKMYDNLHQFCVNELLDGDQTK
Sbjct: 481 MQMLQHWRKMYDNLHQFCVNELLDGDQTK 440

[Close]

BLAST of CmUC05G101270 vs. NCBI nr
Match: XP_008452567.1 (PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Cucumis melo])

HSP 1 Score: 785.4 bits (2027), Expect = 2.9e-223
Identity = 401/509 (78.78%), Postives = 415/509 (81.53%), Query Frame = 0


Query: 1   MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGS 60
           MVLL+ASSSIDSGIGCWDL TGAEQLRYKSCASP HGLVCVGEKFLACSQLRD AATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 60

Query: 61  VLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHY 120
           VLYWSWCKPQVEVKSFPAEP+MALASNNEGTYIVGGGFSGDIY WEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 121 RAVTCLLFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYEHSFTGHNLPVTDIA 180
           RAVTCL+FSEDDSLLISGSEDGCIRVWSL+TVFDDGW  E+KHLYEHSFTGHNLPVTDI 
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKI 240
           VGYGG NAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDP EHVFY GGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKCPASSDYGLHILGSLSNQRSVLMQEIISLYEYAILPNLLCSCILTSKSVTSL 300
           YTAALNAKCP+SSDYGLHILGSLSNQ                           SKSVTSL
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSLSNQ---------------------------SKSVTSL 300

Query: 301 AFCSSGNLLISGSEDGAIRVWDTRTNNIIRVFRHSKGTKPFKFYYFDKAHLSLFMRDWFF 360
           A+CSSGNLLISG EDGAIRVWDTRTNN+IRVFRHSKG                       
Sbjct: 301 AYCSSGNLLISGYEDGAIRVWDTRTNNVIRVFRHSKG----------------------- 360

Query: 361 LCFVILIVSPINNILVVRQQLLPKPQSTSQGSLRKHRSLLPPALAKFENSKDEDEDTGVI 420
                    P+NNIL+V+QQ LPK QSTSQGSLRKHR +LPPALAKFENSKDEDE TGVI
Sbjct: 361 ---------PVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGVI 420

Query: 421 IGPSGPLKEFMGLSPLSSHVMDNQITELQVLALVPSPFHQQGSAATGMELERLKYDREKS 480
           I PSGP KE M  S LSSHVMDNQITELQ          QQGSAAT MELERLK+D  KS
Sbjct: 421 IDPSGPPKESMEFSFLSSHVMDNQITELQ----------QQGSAATEMELERLKHDYGKS 440

Query: 481 VQMLQHWRKMYDNLHQFCVNELLDGDQTK 510
            QMLQHWRKMYDNLHQFCVNELLDG+QTK
Sbjct: 481 KQMLQHWRKMYDNLHQFCVNELLDGNQTK 440

[Close]

BLAST of CmUC05G101270 vs. NCBI nr
Match: XP_011654116.2 (protein ROOT INITIATION DEFECTIVE 3 [Cucumis sativus])

HSP 1 Score: 783.5 bits (2022), Expect = 1.1e-222
Identity = 398/509 (78.19%), Postives = 416/509 (81.73%), Query Frame = 0


Query: 1   MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGS 60
           MVLL+ASSSIDSGIGCWDL TG+EQLRYKSCASP HGLVCVG KFLACSQLRDPAATAGS
Sbjct: 63  MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGRKFLACSQLRDPAATAGS 122

Query: 61  VLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHY 120
           VLYWSW KPQVEVKSFPAEP+MALASN+EGTYIVGGGFSGDIY WEVLSGRLLKKWHAHY
Sbjct: 123 VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 182

Query: 121 RAVTCLLFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYEHSFTGHNLPVTDIA 180
           RAVTCL+FSEDDSLL+SGSEDGCIRVWSL+TVFDDGW  E+KHLYEHSFTGHNLPVTDI 
Sbjct: 183 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 242

Query: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKI 240
           VGYGG NAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDP EHVFY GGRDGKI
Sbjct: 243 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 302

Query: 241 YTAALNAKCPASSDYGLHILGSLSNQRSVLMQEIISLYEYAILPNLLCSCILTSKSVTSL 300
           YTAALNAKCP+SSDYGLHILGS+SNQ                           SKSVTSL
Sbjct: 303 YTAALNAKCPSSSDYGLHILGSISNQ---------------------------SKSVTSL 362

Query: 301 AFCSSGNLLISGSEDGAIRVWDTRTNNIIRVFRHSKGTKPFKFYYFDKAHLSLFMRDWFF 360
           A+CSSGNLLISGSEDGAIRVWDTRTNN+IRVFRHSKG                       
Sbjct: 363 AYCSSGNLLISGSEDGAIRVWDTRTNNVIRVFRHSKG----------------------- 422

Query: 361 LCFVILIVSPINNILVVRQQLLPKPQSTSQGSLRKHRSLLPPALAKFENSKDEDEDTGVI 420
                    P+NNIL+V+QQ LPK QSTSQGSLRKHR LLPPALAKFENSKDEDE TGVI
Sbjct: 423 ---------PVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGVI 482

Query: 421 IGPSGPLKEFMGLSPLSSHVMDNQITELQVLALVPSPFHQQGSAATGMELERLKYDREKS 480
           I PSGP KE  G S LSSHVMD+QITELQ          QQGSAATGMELERLK+D  KS
Sbjct: 483 IDPSGPPKESTGFSFLSSHVMDDQITELQ----------QQGSAATGMELERLKHDYGKS 502

Query: 481 VQMLQHWRKMYDNLHQFCVNELLDGDQTK 510
            QMLQHWRKMYDNLHQFCVNELLDG+QTK
Sbjct: 543 KQMLQHWRKMYDNLHQFCVNELLDGNQTK 502

[Close]

BLAST of CmUC05G101270 vs. NCBI nr
Match: KGN55205.1 (hypothetical protein Csa_012375 [Cucumis sativus])

HSP 1 Score: 783.5 bits (2022), Expect = 1.1e-222
Identity = 398/509 (78.19%), Postives = 416/509 (81.73%), Query Frame = 0


Query: 1   MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGS 60
           MVLL+ASSSIDSGIGCWDL TG+EQLRYKSCASP HGLVCVG KFLACSQLRDPAATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGRKFLACSQLRDPAATAGS 60

Query: 61  VLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHY 120
           VLYWSW KPQVEVKSFPAEP+MALASN+EGTYIVGGGFSGDIY WEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 121 RAVTCLLFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYEHSFTGHNLPVTDIA 180
           RAVTCL+FSEDDSLL+SGSEDGCIRVWSL+TVFDDGW  E+KHLYEHSFTGHNLPVTDI 
Sbjct: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKI 240
           VGYGG NAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDP EHVFY GGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKCPASSDYGLHILGSLSNQRSVLMQEIISLYEYAILPNLLCSCILTSKSVTSL 300
           YTAALNAKCP+SSDYGLHILGS+SNQ                           SKSVTSL
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSISNQ---------------------------SKSVTSL 300

Query: 301 AFCSSGNLLISGSEDGAIRVWDTRTNNIIRVFRHSKGTKPFKFYYFDKAHLSLFMRDWFF 360
           A+CSSGNLLISGSEDGAIRVWDTRTNN+IRVFRHSKG                       
Sbjct: 301 AYCSSGNLLISGSEDGAIRVWDTRTNNVIRVFRHSKG----------------------- 360

Query: 361 LCFVILIVSPINNILVVRQQLLPKPQSTSQGSLRKHRSLLPPALAKFENSKDEDEDTGVI 420
                    P+NNIL+V+QQ LPK QSTSQGSLRKHR LLPPALAKFENSKDEDE TGVI
Sbjct: 361 ---------PVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGVI 420

Query: 421 IGPSGPLKEFMGLSPLSSHVMDNQITELQVLALVPSPFHQQGSAATGMELERLKYDREKS 480
           I PSGP KE  G S LSSHVMD+QITELQ          QQGSAATGMELERLK+D  KS
Sbjct: 421 IDPSGPPKESTGFSFLSSHVMDDQITELQ----------QQGSAATGMELERLKHDYGKS 440

Query: 481 VQMLQHWRKMYDNLHQFCVNELLDGDQTK 510
            QMLQHWRKMYDNLHQFCVNELLDG+QTK
Sbjct: 481 KQMLQHWRKMYDNLHQFCVNELLDGNQTK 440

[Close]

BLAST of CmUC05G101270 vs. NCBI nr
Match: XP_022941447.1 (protein ROOT INITIATION DEFECTIVE 3 [Cucurbita moschata] >KAG6608496.1 Protein ROOT INITIATION DEFECTIVE 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 774.6 bits (1999), Expect = 5.2e-220
Identity = 394/512 (76.95%), Postives = 415/512 (81.05%), Query Frame = 0


Query: 1   MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGS 60
           MVL++ASSS+DSGIGCWDL TGAEQLRYKSCASPAHGLVCVGE+FLACSQLRDPAAT+GS
Sbjct: 1   MVLVVASSSVDSGIGCWDLHTGAEQLRYKSCASPAHGLVCVGERFLACSQLRDPAATSGS 60

Query: 61  VLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHY 120
           VLYWSW KPQVEVKSFPAEP+MALASNNEGTYIVGGGFSGDIY WEVLSGRLL KWHAHY
Sbjct: 61  VLYWSWFKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLMKWHAHY 120

Query: 121 RAVTCLLFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYEHSFTGHNLPVTDIA 180
           RAVTCL+FSEDDSLLISGSEDGC+RVWSLL VFDDGW  ESKHLYEHSFTGHNLPVTDI 
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCVRVWSLLKVFDDGWQRESKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKI 240
           +GYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDP EHVFY GGRDGKI
Sbjct: 181 IGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKCPASSDYGLHILGSLSNQRSVLMQEIISLYEYAILPNLLCSCILTSKSVTSL 300
           YTAALNAK P+SSDYGLHILGSLSNQ                           SKSVTSL
Sbjct: 241 YTAALNAKSPSSSDYGLHILGSLSNQ---------------------------SKSVTSL 300

Query: 301 AFCSSGNLLISGSEDGAIRVWDTRTNNIIRVFRHSKGTKPFKFYYFDKAHLSLFMRDWFF 360
           A+CSSGNLLISGSEDGAI+VWDTRTNNIIRV +HSKG                       
Sbjct: 301 AYCSSGNLLISGSEDGAIKVWDTRTNNIIRVLKHSKG----------------------- 360

Query: 361 LCFVILIVSPINNILVVRQQLLPKPQ--STSQGSLRKHRSLLPPALAKFENSKDEDEDTG 420
                    P+NN+L+VRQQLLP  Q   TSQGSLRKHRSLLPPALAKF NSKD+DEDTG
Sbjct: 361 ---------PVNNLLIVRQQLLPTSQLNPTSQGSLRKHRSLLPPALAKFGNSKDDDEDTG 420

Query: 421 VIIGPSGPLKEFMGLSPLSSHVMDNQITELQVLALVPSPFHQQGSAATGMELERLKYDRE 480
           VIIG SGP  E MG SP+SSHVMDNQITELQ          QQGSAATGMELERLK D  
Sbjct: 421 VIIGRSGPPMESMGFSPISSHVMDNQITELQ----------QQGSAATGMELERLKRDYG 443

Query: 481 KSVQMLQHWRKMYDNLHQFCVNELLDGDQTKI 511
           KS+QM Q WRK+YDNLHQ+CVNELLDGDQTKI
Sbjct: 481 KSMQMQQQWRKLYDNLHQYCVNELLDGDQTKI 443

[Close]

BLAST of CmUC05G101270 vs. ExPASy Swiss-Prot
Match: Q9M3B4 (Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 7.2e-132
Identity = 248/500 (49.60%), Postives = 320/500 (64.00%), Query Frame = 0


Query: 2   VLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGSV 61
           + +IASSSID GIG WDL+TG EQL++K CASPAHGL  VGEKFLA SQL     T+GS+
Sbjct: 3   ITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQL-SARNTSGSI 62

Query: 62  LYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHYR 121
            YWSW KPQ EVKS+P EP+ ALA+NNEGTY+VGGG SGDIY WEV +G+LLKKWH HYR
Sbjct: 63  FYWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYR 122

Query: 122 AVTCLLFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYEHSFTGHNLPVTDIAV 181
           +VTCL+FS DDSLL+SGS+DG IRVWSL+ +FDD    +   LYEH+F  H + VTDI +
Sbjct: 123 SVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVI 182

Query: 182 GYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKIY 241
            YGG NA+IISSS DRTCKVWSLS+GKLL+NIIFPS+I+A+ALDP   VFYAG RD KIY
Sbjct: 183 DYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIY 242

Query: 242 TAALNAKCPASSDYGLHILGSLSNQRSVLMQEIISLYEYAILPNLLCSCILTSKSVTSLA 301
             A+N    A+S+YG  +LGS+S +                            K++T LA
Sbjct: 243 IGAIN----ATSEYGTQVLGSVSEK---------------------------GKAITCLA 302

Query: 302 FCSSGNLLISGSEDGAIRVWDTRTNNIIRVFRHSKGTKPFKFYYFDKAHLSLFMRDWFFL 361
           +C+ GNLLISGSEDG + VWD ++   +R   H+KG++                      
Sbjct: 303 YCADGNLLISGSEDGVVCVWDPKSLRHVRTLIHAKGSRK--------------------- 362

Query: 362 CFVILIVSPINNILVVRQQLLPKPQSTSQGSLRKHRSLLPPALAKFENSKDEDEDTGVII 421
                   P+NNI +VR+ ++     T Q S +   +L+PP L K+E   ++  D  V +
Sbjct: 363 -------GPVNNIQIVRKTIVANSNKT-QVSWKSRGALIPPPLEKYERPVEDTMDGIVTV 422

Query: 422 GPSGPLKEFMGLSPLSSHVMDNQITELQVLALVPSPFHQQGSAATGMELERLKYDREKSV 481
            P       +  S LS+ ++D Q+ ELQ          QQGSAAT ME+ERLK + ++S+
Sbjct: 423 DPPPFSDVPVYSSFLSADLIDEQVKELQ----------QQGSAATEMEMERLKLEYKRSL 431

Query: 482 QMLQHWRKMYDNLHQFCVNE 502
           QM + W+K Y+NL Q  + E
Sbjct: 483 QMNEQWQKNYENLLQVVMEE 431

[Close]

BLAST of CmUC05G101270 vs. ExPASy Swiss-Prot
Match: Q9BV38 (WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2)

HSP 1 Score: 151.8 bits (382), Expect = 2.2e-35
Identity = 95/316 (30.06%), Postives = 156/316 (49.37%), Query Frame = 0


Query: 17  WDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGSVLYWSWCKPQVEVKSF 76
           W+L +GA  L Y+   +   GL  +  ++L  +QL     +A  +      K Q++ K  
Sbjct: 23  WELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQLGKNYISAWELQR----KDQLQQKIM 82

Query: 77  PAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHYRAVTCLLFSEDDSLLI 136
              P+  L ++  G Y++  G +  I+ WEV +G LL     HY+ V+CL F+ D S  I
Sbjct: 83  CPGPVTCLTASPNGLYVL-AGVAESIHLWEVSTGNLLVILSRHYQDVSCLQFTGDSSHFI 142

Query: 137 SGSEDGCIRVWSLLTVF--DDGWHSESKHLYEHSFTGHNLPVTDIAVGYGGSNAIIISSS 196
           SG +D  + VWSL +V   D       +H++ H    H LP+TD+  G+GG  A + +SS
Sbjct: 143 SGGKDCLVLVWSLCSVLQADPSRIPAPRHVWSH----HALPITDLHCGFGGPLARVATSS 202

Query: 197 VDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKIYTAALNAKCPASSD 256
           +D+T K+W +S G+LL +++F   I A+ +D AEH  + GG +G I+   L    P   +
Sbjct: 203 LDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHHMFCGGSEGSIFQVDL-FTWPGQRE 262

Query: 257 YGLHILGSLSNQRSVLMQEIISLYEYAILPNLLCSCILTSKSVTSLAFCSSGNLLISGSE 316
              H             Q+   +++                 VT L+  + G++L+SGS 
Sbjct: 263 RSFH-----------PEQDAGKVFKG------------HRNQVTCLSVSTDGSVLLSGSH 305

Query: 317 DGAIRVWDTRTNNIIR 331
           D  +R+WD ++   IR
Sbjct: 323 DETVRLWDVQSKQCIR 305

[Close]

BLAST of CmUC05G101270 vs. ExPASy Swiss-Prot
Match: A0A1L8HX76 (WD repeat-containing protein 18 OS=Xenopus laevis OX=8355 GN=wdr18 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.2e-35
Identity = 97/321 (30.22%), Postives = 154/321 (47.98%), Query Frame = 0


Query: 17  WDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGSVLYWS-WCKPQVEVKS 76
           W+  TG+  L Y+   +   GL  +G ++L   QL         +  W    + Q++ K 
Sbjct: 23  WEPVTGSVLLTYRGGNTSHRGLAVLGGQYLLGGQL-----GKNYINVWELQRRDQLQQKI 82

Query: 77  FPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHYRAVTCLLFSEDDSLL 136
               P+  L+++  G Y+V  G +  IY WEV +G LL   ++HY+ VTCL F++D S +
Sbjct: 83  VCPGPVNCLSASPNGLYLV-AGIAESIYLWEVSTGHLLAILNSHYQDVTCLTFTDDSSHI 142

Query: 137 ISGSEDGCIRVWSLLTVF--DDGWHSESKHLYEHSFTGHNLPVTDIAVGYGGSNAIIISS 196
           ISG++D  + VW L +V   +     E ++++      H+LP+TD+  G GG  A + +S
Sbjct: 143 ISGAKDSLVLVWGLYSVLQVETSRGPEPRYVWSR----HSLPITDVQCGIGGPQARVATS 202

Query: 197 SVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKIYTAALNAKCPASS 256
           S+D+T K+W +  G LL +++F   I ++A DPAE+  + GG DG IY   L    P   
Sbjct: 203 SLDQTIKLWDICSGDLLVSVLFDVRITSVAFDPAEYHLFCGGSDGVIYQVDLYT-TPEQR 262

Query: 257 DYGLHILGSLSNQRSVLMQEIISLYEYAILPNLLCSCILTSKSVTSLAFCSSGNLLISGS 316
           +   H       Q  V                           VT L+    G++LISGS
Sbjct: 263 ERPFH-----PEQEMVFKGH--------------------RNQVTCLSVSLDGSMLISGS 307

Query: 317 EDGAIRVWDTRTNNIIRVFRH 335
            D  + VWD ++   +R   H
Sbjct: 323 HDETVCVWDIQSKQSLRSVPH 307

[Close]

BLAST of CmUC05G101270 vs. ExPASy Swiss-Prot
Match: Q3SZD4 (WD repeat-containing protein 18 OS=Bos taurus OX=9913 GN=WDR18 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 4.1e-34
Identity = 97/321 (30.22%), Postives = 155/321 (48.29%), Query Frame = 0


Query: 17  WDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGSVLYWSW---CKPQVEV 76
           W+L +GA  L Y+   +   GL  +  ++L  +QL       G     +W    K Q++ 
Sbjct: 23  WELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQL-------GKNYICAWELQRKDQLQQ 82

Query: 77  KSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHYRAVTCLLFSEDDS 136
           K     P+  L ++  G Y++  G S +IY WEV +G LL     HY+ V+CL F+ D S
Sbjct: 83  KIMCPGPVTCLTTSPNGLYVL-AGISENIYLWEVSTGNLLVILSRHYQDVSCLQFTGDSS 142

Query: 137 LLISGSEDGCIRVWSLLTVF--DDGWHSESKHLYEHSFTGHNLPVTDIAVGYGGSNAIII 196
             ISG +D  +  WSL +V   D       +H++      H LP+TD+  G+GG  A + 
Sbjct: 143 HFISGGKDCLVLAWSLCSVLQADPSRTPAPRHVWSR----HTLPITDLHCGFGGPLARVA 202

Query: 197 SSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKIYTAALNAKCPA 256
           ++S+D+T K+W +S G+LL +++F   I A+ +D AEH  + GG DG I+   L   C  
Sbjct: 203 TASLDQTVKLWEVSSGELLLSVLFDVGILAVTMDLAEHYMFCGGSDGSIFQVDL---C-- 262

Query: 257 SSDYGLHILGSLSNQRSVLMQEIISLYEYAILPNLLCSCILTS--KSVTSLAFCSSGNLL 316
                     +   QR           E +  P      +       VT L+  + G++L
Sbjct: 263 ----------TWPGQR-----------EKSFQPEQEHGKVFRGHRNQVTCLSVSTDGSVL 305

Query: 317 ISGSEDGAIRVWDTRTNNIIR 331
           +SGS D  +R+WD ++   +R
Sbjct: 323 LSGSHDETVRLWDVQSQQCLR 305

[Close]

BLAST of CmUC05G101270 vs. ExPASy Swiss-Prot
Match: Q499N3 (WD repeat-containing protein 18 OS=Rattus norvegicus OX=10116 GN=Wdr18 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.2e-33
Identity = 92/318 (28.93%), Postives = 151/318 (47.48%), Query Frame = 0


Query: 17  WDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGSVLYWSW---CKPQVEV 76
           W+L +GA  L Y+   +   GL  +  ++L        AA  G     +W    K Q++ 
Sbjct: 23  WELHSGANLLTYRGGQAGPRGLALLNGEYLL-------AAQQGKNYICAWELQRKDQLQQ 82

Query: 77  KSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHYRAVTCLLFSEDDS 136
           K     P+  L +   G Y++  G +  IY WEV +G LL     HY+ V+CL F+ D S
Sbjct: 83  KIMCPGPVTCLTTAPNGLYVL-AGIAESIYLWEVSTGNLLVILSRHYQDVSCLKFTGDGS 142

Query: 137 LLISGSEDGCIRVWSLLTVFDDGWHSESKHLY-EHSFTGHNLPVTDIAVGYGGSNAIIIS 196
             +S  +D  +  WSL +V        S+ L   H ++ H LP+TD+  G+GG  A + +
Sbjct: 143 HFVSAGKDCLVLAWSLCSVLQ---ADPSRILAPRHVWSQHTLPITDLHCGFGGPMARVAT 202

Query: 197 SSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKIYTAALNAKCPAS 256
           +S+D+T K+W++S G LL +++F   I ++ +D AEH  + GG DG I+   L ++ P  
Sbjct: 203 ASLDQTMKLWAISSGDLLLSVLFDMGITSVTMDLAEHYIFCGGSDGSIFQVDLCSR-PGP 262

Query: 257 SDYGLHILGSLSNQRSVLMQEIISLYEYAILPNLLCSCILTSKSVTSLAFCSSGNLLISG 316
            +          N   V                           VT L+  + G++L+SG
Sbjct: 263 REQSFQ---PEQNTGKVFKGH--------------------RNQVTCLSVSTDGSILLSG 305

Query: 317 SEDGAIRVWDTRTNNIIR 331
           S D ++R+WD ++   +R
Sbjct: 323 SHDESVRLWDVKSKQCVR 305

[Close]

BLAST of CmUC05G101270 vs. ExPASy TrEMBL
Match: A0A1S3BU36 (protein ROOT INITIATION DEFECTIVE 3 OS=Cucumis melo OX=3656 GN=LOC103493552 PE=4 SV=1)

HSP 1 Score: 785.4 bits (2027), Expect = 1.4e-223
Identity = 401/509 (78.78%), Postives = 415/509 (81.53%), Query Frame = 0


Query: 1   MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGS 60
           MVLL+ASSSIDSGIGCWDL TGAEQLRYKSCASP HGLVCVGEKFLACSQLRD AATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 60

Query: 61  VLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHY 120
           VLYWSWCKPQVEVKSFPAEP+MALASNNEGTYIVGGGFSGDIY WEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 121 RAVTCLLFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYEHSFTGHNLPVTDIA 180
           RAVTCL+FSEDDSLLISGSEDGCIRVWSL+TVFDDGW  E+KHLYEHSFTGHNLPVTDI 
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKI 240
           VGYGG NAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDP EHVFY GGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKCPASSDYGLHILGSLSNQRSVLMQEIISLYEYAILPNLLCSCILTSKSVTSL 300
           YTAALNAKCP+SSDYGLHILGSLSNQ                           SKSVTSL
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSLSNQ---------------------------SKSVTSL 300

Query: 301 AFCSSGNLLISGSEDGAIRVWDTRTNNIIRVFRHSKGTKPFKFYYFDKAHLSLFMRDWFF 360
           A+CSSGNLLISG EDGAIRVWDTRTNN+IRVFRHSKG                       
Sbjct: 301 AYCSSGNLLISGYEDGAIRVWDTRTNNVIRVFRHSKG----------------------- 360

Query: 361 LCFVILIVSPINNILVVRQQLLPKPQSTSQGSLRKHRSLLPPALAKFENSKDEDEDTGVI 420
                    P+NNIL+V+QQ LPK QSTSQGSLRKHR +LPPALAKFENSKDEDE TGVI
Sbjct: 361 ---------PVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGVI 420

Query: 421 IGPSGPLKEFMGLSPLSSHVMDNQITELQVLALVPSPFHQQGSAATGMELERLKYDREKS 480
           I PSGP KE M  S LSSHVMDNQITELQ          QQGSAAT MELERLK+D  KS
Sbjct: 421 IDPSGPPKESMEFSFLSSHVMDNQITELQ----------QQGSAATEMELERLKHDYGKS 440

Query: 481 VQMLQHWRKMYDNLHQFCVNELLDGDQTK 510
            QMLQHWRKMYDNLHQFCVNELLDG+QTK
Sbjct: 481 KQMLQHWRKMYDNLHQFCVNELLDGNQTK 440

[Close]

BLAST of CmUC05G101270 vs. ExPASy TrEMBL
Match: A0A0A0KZT0 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G639920 PE=4 SV=1)

HSP 1 Score: 783.5 bits (2022), Expect = 5.4e-223
Identity = 398/509 (78.19%), Postives = 416/509 (81.73%), Query Frame = 0


Query: 1   MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGS 60
           MVLL+ASSSIDSGIGCWDL TG+EQLRYKSCASP HGLVCVG KFLACSQLRDPAATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGRKFLACSQLRDPAATAGS 60

Query: 61  VLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHY 120
           VLYWSW KPQVEVKSFPAEP+MALASN+EGTYIVGGGFSGDIY WEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 121 RAVTCLLFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYEHSFTGHNLPVTDIA 180
           RAVTCL+FSEDDSLL+SGSEDGCIRVWSL+TVFDDGW  E+KHLYEHSFTGHNLPVTDI 
Sbjct: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKI 240
           VGYGG NAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDP EHVFY GGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKCPASSDYGLHILGSLSNQRSVLMQEIISLYEYAILPNLLCSCILTSKSVTSL 300
           YTAALNAKCP+SSDYGLHILGS+SNQ                           SKSVTSL
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSISNQ---------------------------SKSVTSL 300

Query: 301 AFCSSGNLLISGSEDGAIRVWDTRTNNIIRVFRHSKGTKPFKFYYFDKAHLSLFMRDWFF 360
           A+CSSGNLLISGSEDGAIRVWDTRTNN+IRVFRHSKG                       
Sbjct: 301 AYCSSGNLLISGSEDGAIRVWDTRTNNVIRVFRHSKG----------------------- 360

Query: 361 LCFVILIVSPINNILVVRQQLLPKPQSTSQGSLRKHRSLLPPALAKFENSKDEDEDTGVI 420
                    P+NNIL+V+QQ LPK QSTSQGSLRKHR LLPPALAKFENSKDEDE TGVI
Sbjct: 361 ---------PVNNILLVQQQPLPKSQSTSQGSLRKHRPLLPPALAKFENSKDEDEYTGVI 420

Query: 421 IGPSGPLKEFMGLSPLSSHVMDNQITELQVLALVPSPFHQQGSAATGMELERLKYDREKS 480
           I PSGP KE  G S LSSHVMD+QITELQ          QQGSAATGMELERLK+D  KS
Sbjct: 421 IDPSGPPKESTGFSFLSSHVMDDQITELQ----------QQGSAATGMELERLKHDYGKS 440

Query: 481 VQMLQHWRKMYDNLHQFCVNELLDGDQTK 510
            QMLQHWRKMYDNLHQFCVNELLDG+QTK
Sbjct: 481 KQMLQHWRKMYDNLHQFCVNELLDGNQTK 440

[Close]

BLAST of CmUC05G101270 vs. ExPASy TrEMBL
Match: A0A6J1FMG7 (protein ROOT INITIATION DEFECTIVE 3 OS=Cucurbita moschata OX=3662 GN=LOC111446741 PE=4 SV=1)

HSP 1 Score: 774.6 bits (1999), Expect = 2.5e-220
Identity = 394/512 (76.95%), Postives = 415/512 (81.05%), Query Frame = 0


Query: 1   MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGS 60
           MVL++ASSS+DSGIGCWDL TGAEQLRYKSCASPAHGLVCVGE+FLACSQLRDPAAT+GS
Sbjct: 1   MVLVVASSSVDSGIGCWDLHTGAEQLRYKSCASPAHGLVCVGERFLACSQLRDPAATSGS 60

Query: 61  VLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHY 120
           VLYWSW KPQVEVKSFPAEP+MALASNNEGTYIVGGGFSGDIY WEVLSGRLL KWHAHY
Sbjct: 61  VLYWSWFKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLMKWHAHY 120

Query: 121 RAVTCLLFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYEHSFTGHNLPVTDIA 180
           RAVTCL+FSEDDSLLISGSEDGC+RVWSLL VFDDGW  ESKHLYEHSFTGHNLPVTDI 
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCVRVWSLLKVFDDGWQRESKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKI 240
           +GYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDP EHVFY GGRDGKI
Sbjct: 181 IGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKCPASSDYGLHILGSLSNQRSVLMQEIISLYEYAILPNLLCSCILTSKSVTSL 300
           YTAALNAK P+SSDYGLHILGSLSNQ                           SKSVTSL
Sbjct: 241 YTAALNAKSPSSSDYGLHILGSLSNQ---------------------------SKSVTSL 300

Query: 301 AFCSSGNLLISGSEDGAIRVWDTRTNNIIRVFRHSKGTKPFKFYYFDKAHLSLFMRDWFF 360
           A+CSSGNLLISGSEDGAI+VWDTRTNNIIRV +HSKG                       
Sbjct: 301 AYCSSGNLLISGSEDGAIKVWDTRTNNIIRVLKHSKG----------------------- 360

Query: 361 LCFVILIVSPINNILVVRQQLLPKPQ--STSQGSLRKHRSLLPPALAKFENSKDEDEDTG 420
                    P+NN+L+VRQQLLP  Q   TSQGSLRKHRSLLPPALAKF NSKD+DEDTG
Sbjct: 361 ---------PVNNLLIVRQQLLPTSQLNPTSQGSLRKHRSLLPPALAKFGNSKDDDEDTG 420

Query: 421 VIIGPSGPLKEFMGLSPLSSHVMDNQITELQVLALVPSPFHQQGSAATGMELERLKYDRE 480
           VIIG SGP  E MG SP+SSHVMDNQITELQ          QQGSAATGMELERLK D  
Sbjct: 421 VIIGRSGPPMESMGFSPISSHVMDNQITELQ----------QQGSAATGMELERLKRDYG 443

Query: 481 KSVQMLQHWRKMYDNLHQFCVNELLDGDQTKI 511
           KS+QM Q WRK+YDNLHQ+CVNELLDGDQTKI
Sbjct: 481 KSMQMQQQWRKLYDNLHQYCVNELLDGDQTKI 443

[Close]

BLAST of CmUC05G101270 vs. ExPASy TrEMBL
Match: A0A6J1IYT8 (protein ROOT INITIATION DEFECTIVE 3 OS=Cucurbita maxima OX=3661 GN=LOC111481134 PE=4 SV=1)

HSP 1 Score: 763.1 bits (1969), Expect = 7.6e-217
Identity = 389/512 (75.98%), Postives = 412/512 (80.47%), Query Frame = 0


Query: 1   MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGS 60
           MVL++ASSS+DSGIGCWDL TGAEQL YKSCASPAHGLVCVGE+FLACSQLRDPAAT+GS
Sbjct: 1   MVLVVASSSVDSGIGCWDLHTGAEQLCYKSCASPAHGLVCVGERFLACSQLRDPAATSGS 60

Query: 61  VLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHY 120
           VLYWSW KPQVEVKSFPAEP+MALASNNEGTYIVGGGFSGDIY WEVLSGRLL KWHAHY
Sbjct: 61  VLYWSWFKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLMKWHAHY 120

Query: 121 RAVTCLLFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYEHSFTGHNLPVTDIA 180
           RAVTCL FSEDDSLLISGSEDGC+RVWSLL VFDDGW  ESKHLYEHSFTGHNLPVTDI 
Sbjct: 121 RAVTCLEFSEDDSLLISGSEDGCVRVWSLLKVFDDGWQRESKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKI 240
           +GYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDP EHVFY GGRDGKI
Sbjct: 181 IGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKCPASSDYGLHILGSLSNQRSVLMQEIISLYEYAILPNLLCSCILTSKSVTSL 300
           YTAALNAK P+SSDYGLHILGSLSNQ                           SKSVTSL
Sbjct: 241 YTAALNAKSPSSSDYGLHILGSLSNQ---------------------------SKSVTSL 300

Query: 301 AFCSSGNLLISGSEDGAIRVWDTRTNNIIRVFRHSKGTKPFKFYYFDKAHLSLFMRDWFF 360
           A+CSSGNLLISGSEDGAI+VWDTRTNNIIRV +HSKG                       
Sbjct: 301 AYCSSGNLLISGSEDGAIKVWDTRTNNIIRVLKHSKG----------------------- 360

Query: 361 LCFVILIVSPINNILVVRQQLLPKPQ--STSQGSLRKHRSLLPPALAKFENSKDEDEDTG 420
                    P+NN+L+V+ QLLP  Q   TSQGSLRKHRSLLPPALAKF NSKD+DEDTG
Sbjct: 361 ---------PVNNLLIVQHQLLPTSQLNPTSQGSLRKHRSLLPPALAKFGNSKDDDEDTG 420

Query: 421 VIIGPSGPLKEFMGLSPLSSHVMDNQITELQVLALVPSPFHQQGSAATGMELERLKYDRE 480
           VIIG SGP  E MG SP+SSHVMD+QITELQ          QQGSAATGMELERLK +  
Sbjct: 421 VIIGRSGPPMESMGFSPISSHVMDHQITELQ----------QQGSAATGMELERLKREYG 443

Query: 481 KSVQMLQHWRKMYDNLHQFCVNELLDGDQTKI 511
           KS+QM Q WRK+YDNLHQ+CVNELLDGDQTKI
Sbjct: 481 KSMQMQQQWRKLYDNLHQYCVNELLDGDQTKI 443

[Close]

BLAST of CmUC05G101270 vs. ExPASy TrEMBL
Match: A0A5D3D9F7 (Protein ROOT INITIATION DEFECTIVE 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003270 PE=4 SV=1)

HSP 1 Score: 745.3 bits (1923), Expect = 1.6e-211
Identity = 383/490 (78.16%), Postives = 396/490 (80.82%), Query Frame = 0


Query: 1   MVLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGS 60
           MVLL+ASSSIDSGIGCWDL TGAEQLRYKSCASP HGLVCVGEKFLACSQLRD AATAGS
Sbjct: 1   MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 60

Query: 61  VLYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHY 120
           VLYWSWCKPQVEVKSFPAEP+MALASNNEGTYIVGGGFSGDIY WEVLSGRLLKKWHAHY
Sbjct: 61  VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120

Query: 121 RAVTCLLFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYEHSFTGHNLPVTDIA 180
           RAVTCL+FSEDDSLLISGSEDGCIRVWSL+TVFDDGW  E+KHLYEHSFTGHNLPVTDI 
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180

Query: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKI 240
           VGYGG NAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDP EHVFY GGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240

Query: 241 YTAALNAKCPASSDYGLHILGSLSNQRSVLMQEIISLYEYAILPNLLCSCILTSKSVTSL 300
           YTAALNAKCP+SSDYGLHILGSLSNQ                           SKSVTSL
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSLSNQ---------------------------SKSVTSL 300

Query: 301 AFCSSGNLLISGSEDGAIRVWDTRTNNIIRVFRHSKGTKPFKFYYFDKAHLSLFMRDWFF 360
           A+CSSGNLLISG EDGAIRVWDTRTNN+IRVFRHSKG                       
Sbjct: 301 AYCSSGNLLISGYEDGAIRVWDTRTNNVIRVFRHSKG----------------------- 360

Query: 361 LCFVILIVSPINNILVVRQQLLPKPQSTSQGSLRKHRSLLPPALAKFENSKDEDEDTGVI 420
                    P+NNIL+V+QQ LPK QSTSQGSLRKHR +LPPALAKFENSKDEDE TGVI
Sbjct: 361 ---------PVNNILLVQQQPLPKSQSTSQGSLRKHRPILPPALAKFENSKDEDEYTGVI 420

Query: 421 IGPSGPLKEFMGLSPLSSHVMDNQITELQVLALVPSPFHQQGSAATGMELERLKYDREKS 480
           I PSGP KE M  S LSSHVMDNQITELQ          QQGSAAT MELERLK+D  KS
Sbjct: 421 IDPSGPPKESMEFSFLSSHVMDNQITELQ----------QQGSAATEMELERLKHDYGKS 421

Query: 481 VQMLQHWRKM 491
            QMLQHWRKM
Sbjct: 481 KQMLQHWRKM 421

[Close]

BLAST of CmUC05G101270 vs. TAIR 10
Match: AT3G49180.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 472.2 bits (1214), Expect = 5.1e-133
Identity = 248/500 (49.60%), Postives = 320/500 (64.00%), Query Frame = 0


Query: 2   VLLIASSSIDSGIGCWDLQTGAEQLRYKSCASPAHGLVCVGEKFLACSQLRDPAATAGSV 61
           + +IASSSID GIG WDL+TG EQL++K CASPAHGL  VGEKFLA SQL     T+GS+
Sbjct: 3   ITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQL-SARNTSGSI 62

Query: 62  LYWSWCKPQVEVKSFPAEPLMALASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHYR 121
            YWSW KPQ EVKS+P EP+ ALA+NNEGTY+VGGG SGDIY WEV +G+LLKKWH HYR
Sbjct: 63  FYWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYR 122

Query: 122 AVTCLLFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYEHSFTGHNLPVTDIAV 181
           +VTCL+FS DDSLL+SGS+DG IRVWSL+ +FDD    +   LYEH+F  H + VTDI +
Sbjct: 123 SVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVI 182

Query: 182 GYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPAEHVFYAGGRDGKIY 241
            YGG NA+IISSS DRTCKVWSLS+GKLL+NIIFPS+I+A+ALDP   VFYAG RD KIY
Sbjct: 183 DYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIY 242

Query: 242 TAALNAKCPASSDYGLHILGSLSNQRSVLMQEIISLYEYAILPNLLCSCILTSKSVTSLA 301
             A+N    A+S+YG  +LGS+S +                            K++T LA
Sbjct: 243 IGAIN----ATSEYGTQVLGSVSEK---------------------------GKAITCLA 302

Query: 302 FCSSGNLLISGSEDGAIRVWDTRTNNIIRVFRHSKGTKPFKFYYFDKAHLSLFMRDWFFL 361
           +C+ GNLLISGSEDG + VWD ++   +R   H+KG++                      
Sbjct: 303 YCADGNLLISGSEDGVVCVWDPKSLRHVRTLIHAKGSRK--------------------- 362

Query: 362 CFVILIVSPINNILVVRQQLLPKPQSTSQGSLRKHRSLLPPALAKFENSKDEDEDTGVII 421
                   P+NNI +VR+ ++     T Q S +   +L+PP L K+E   ++  D  V +
Sbjct: 363 -------GPVNNIQIVRKTIVANSNKT-QVSWKSRGALIPPPLEKYERPVEDTMDGIVTV 422

Query: 422 GPSGPLKEFMGLSPLSSHVMDNQITELQVLALVPSPFHQQGSAATGMELERLKYDREKSV 481
            P       +  S LS+ ++D Q+ ELQ          QQGSAAT ME+ERLK + ++S+
Sbjct: 423 DPPPFSDVPVYSSFLSADLIDEQVKELQ----------QQGSAATEMEMERLKLEYKRSL 431

Query: 482 QMLQHWRKMYDNLHQFCVNE 502
           QM + W+K Y+NL Q  + E
Sbjct: 483 QMNEQWQKNYENLLQVVMEE 431

[Close]

BLAST of CmUC05G101270 vs. TAIR 10
Match: AT1G18080.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 78.6 bits (192), Expect = 1.7e-14
Identity = 64/261 (24.52%), Postives = 119/261 (45.59%), Query Frame = 0


Query: 87  NNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHYRAVTCLLFSEDDSLLISGSEDGCIRV 146
           +++G + + G + G++  W++ +G   +++  H + V  + FS D+  ++S S D  I++
Sbjct: 72  SSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKL 131

Query: 147 WSLLTVFDDGWHSESKHLYEHSFTGHNLPVTDIAVGYGGSNAIIISSSVDRTCKVWSLSK 206
           W+ L         E K+       GH   V+ +          I+S+S D+T KVW+LS 
Sbjct: 132 WNTL--------GECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN 191

Query: 207 GKLLRNII-FPSIIDAIALDPAEHVFYAGGRDG-----------KIYT----AALNAKC- 266
            KL   +      +  +A+ P   +  +GG+DG           K+Y+    + ++A C 
Sbjct: 192 CKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCF 251

Query: 267 -------PASSDYGLHILGSLSNQRSVLMQEIISLYEYAILPNLLCSCILTSKSV--TSL 322
                   A++++G+ I    S  +S++    + L   A   +         K +  TSL
Sbjct: 252 SPNRYWLCAATEHGIKIWDLES--KSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSL 311

[Close]

BLAST of CmUC05G101270 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 3.4e-12
Identity = 63/256 (24.61%), Postives = 108/256 (42.19%), Query Frame = 0


Query: 84  LASNNEGTYIVGGGFSGDIYFWEVLSGRLLKKWHAHYRAVTCLLFSEDDSLLISGSEDGC 143
           +A +++  +IV       +  W+V +G L+K    H     C+ F+   ++++SGS D  
Sbjct: 77  VAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDET 136

Query: 144 IRVWSLLTVFDDGWHSESKHLYEHSFTGHNLPVTDIAVGYGGSNAIIISSSVDRTCKVWS 203
           +R+W + T          K L       H+ PVT  AV +    ++I+SSS D  C++W 
Sbjct: 137 VRIWDVTT---------GKCL--KVLPAHSDPVT--AVDFNRDGSLIVSSSYDGLCRIWD 196

Query: 204 LSKGKLLRNIIFPS--IIDAIALDPAEHVFYAGGRDG-------------KIYTAALNAK 263
              G  ++ +I      +  +   P       G  D              K YT  +NA+
Sbjct: 197 SGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQ 256

Query: 264 CPASSDYGL---HILGSLSNQRSVLMQEIISLYEYAILPNLLCSCILTSKSVTSLAFCSS 322
              SS + +     + S S    V M E+ S         LL      +++V ++A   +
Sbjct: 257 YCISSAFSVTNGKRIVSGSEDNCVHMWELNS-------KKLLQKLEGHTETVMNVACHPT 312

[Close]

BLAST of CmUC05G101270 vs. TAIR 10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 6.5e-11
Identity = 66/294 (22.45%), Postives = 121/294 (41.16%), Query Frame = 0


Query: 55  AATAGSVLYWSWCKPQVEVKSFPAE--PLMALASNNEGTYIVGGGFSGDIYFWEVLSGRL 114
           A T+G+V  +   KP   +K+       +  +  +N+G  +        +  W   +  L
Sbjct: 21  AGTSGNVPIY---KPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSL 80

Query: 115 LKKWHAHYRAVTCLLFSEDDSLLISGSEDGCIRVWSLLTVFDDGWHSESKHLYEHSFTGH 174
           + ++  H   ++ L +S D     S S+D  +R+W           + S +       GH
Sbjct: 81  IHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWD----------ARSPYECLKVLRGH 140

Query: 175 NLPVTDIAVGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSI-IDAIALDPAEHVF 234
              V    V +   + +I+S S D T ++W +  GK +R I   S+ I ++  +    + 
Sbjct: 141 TNFV--FCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLI 200

Query: 235 YAGGRDG--KIYTA--------ALNAKCPASSDYGLHILGSLSNQRSVL---MQEIISLY 294
            +   DG  KI+ A         ++ K PA S           N + +L   +   + L 
Sbjct: 201 VSASHDGSCKIWDAKEGTCLKTLIDDKSPAVS-----FAKFSPNGKFILVATLDSTLKLS 260

Query: 295 EYAILPNLLCSCILTSK--SVTSLAFCSSGNLLISGSEDGAIRVWDTRTNNIIR 331
            YA    L      T+K   +TS    ++G  ++SGSED  + +WD +  NI++
Sbjct: 261 NYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQ 294

[Close]

BLAST of CmUC05G101270 vs. TAIR 10
Match: AT1G15440.1 (periodic tryptophan protein 2 )

HSP 1 Score: 65.1 bits (157), Expect = 1.9e-10
Identity = 62/267 (23.22%), Postives = 113/267 (42.32%), Query Frame = 0


Query: 71  VEVKSFPAEPLMALASNNEGTYIV-GGGFSGDIYFWEVLSGRLLKKWHAHYRAVTCLLFS 130
           + + S   + L     N  G ++  G    G +  W+  +   + K   HY  V C+ +S
Sbjct: 339 IHLLSISRQKLTTAVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYS 398

Query: 131 EDDSLLISGSEDGCIRVWSLL--TVFDDGWHSESKHLYEHSFTGHNLPVTDIAVGYGGSN 190
            D  LL +G++D  ++VW+++  T F              +FT H   VT  A+ +   N
Sbjct: 399 PDSQLLATGADDNKVKVWNVMSGTCF-------------ITFTEHTNAVT--ALHFMADN 458

Query: 191 AIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIAL--DPAEHVFYAGGRDG---KIYT 250
             ++S+S+D T + W   + K  +    P+    ++L  DP+  V  AG  D     +++
Sbjct: 459 HSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWS 518

Query: 251 AALNAKCPASSDYGLHILGSLSNQRSVLMQEIISLYEYAI-LPNLLCS-----CILTSKS 310
                     S +   + G + +  + L+    S ++Y + L ++  S         +  
Sbjct: 519 KKTGQIKDILSGHEAPVHGLMFSPLTQLLAS--SSWDYTVRLWDVFASKGTVETFRHNHD 578

Query: 311 VTSLAFCSSGNLLISGSEDGAIRVWDT 324
           V ++AF   G  L S + DG I  WDT
Sbjct: 579 VLTVAFRPDGKQLASSTLDGQINFWDT 588

The following BLAST results are available for this feature:

BLAST of CmUC05G101270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898957.1	2.8e-226	78.78	protein ROOT INITIATION DEFECTIVE 3 [Benincasa hispida]	[more]
XP_008452567.1	2.9e-223	78.78	PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Cucumis melo]	[more]
XP_011654116.2	1.1e-222	78.19	protein ROOT INITIATION DEFECTIVE 3 [Cucumis sativus]	[more]
KGN55205.1	1.1e-222	78.19	hypothetical protein Csa_012375 [Cucumis sativus]	[more]
XP_022941447.1	5.2e-220	76.95	protein ROOT INITIATION DEFECTIVE 3 [Cucurbita moschata] >KAG6608496.1 Protein R...	[more]

BLAST of CmUC05G101270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3B4	7.2e-132	49.60	Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1...	[more]
Q9BV38	2.2e-35	30.06	WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2	[more]
A0A1L8HX76	2.2e-35	30.22	WD repeat-containing protein 18 OS=Xenopus laevis OX=8355 GN=wdr18 PE=3 SV=1	[more]
Q3SZD4	4.1e-34	30.22	WD repeat-containing protein 18 OS=Bos taurus OX=9913 GN=WDR18 PE=2 SV=1	[more]
Q499N3	1.2e-33	28.93	WD repeat-containing protein 18 OS=Rattus norvegicus OX=10116 GN=Wdr18 PE=2 SV=1	[more]

BLAST of CmUC05G101270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BU36	1.4e-223	78.78	protein ROOT INITIATION DEFECTIVE 3 OS=Cucumis melo OX=3656 GN=LOC103493552 PE=4...	[more]
A0A0A0KZT0	5.4e-223	78.19	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G...	[more]
A0A6J1FMG7	2.5e-220	76.95	protein ROOT INITIATION DEFECTIVE 3 OS=Cucurbita moschata OX=3662 GN=LOC11144674...	[more]
A0A6J1IYT8	7.6e-217	75.98	protein ROOT INITIATION DEFECTIVE 3 OS=Cucurbita maxima OX=3661 GN=LOC111481134 ...	[more]
A0A5D3D9F7	1.6e-211	78.16	Protein ROOT INITIATION DEFECTIVE 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of CmUC05G101270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49180.1	5.1e-133	49.60	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G18080.1	1.7e-14	24.52	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G49660.1	3.4e-12	24.61	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G02730.1	6.5e-11	22.45	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G15440.1	1.9e-10	23.22	periodic tryptophan protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 135..149 score: 40.52 coord: 190..204 score: 36.27 coord: 309..323 score: 40.4
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 69..106 e-value: 6.2 score: 12.0 coord: 109..148 e-value: 1.1E-9 score: 48.2 coord: 285..322 e-value: 3.9E-7 score: 39.7 coord: 206..244 e-value: 150.0 score: 3.2 coord: 162..203 e-value: 3.4E-4 score: 29.9
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 111..148 e-value: 6.0E-7 score: 30.1 coord: 167..203 e-value: 2.5E-4 score: 21.8 coord: 295..322 e-value: 1.5E-6 score: 28.8
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 297..331 score: 14.351543
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 169..212 score: 10.107432
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 116..149 score: 13.783434
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 3..161 e-value: 6.7E-22 score: 79.6
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 162..276 e-value: 4.8E-10 score: 41.0
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 283..376 e-value: 5.4E-12 score: 47.6
None	No IPR available	PANTHER	PTHR18763	WD-REPEAT PROTEIN 18	coord: 3..506
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 116..149 score: 11.418318
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 290..325 score: 10.416506
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 309..323
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 5..337

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC05G101270.1	CmUC05G101270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030174	regulation of DNA-dependent DNA replication initiation
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005656	nuclear pre-replicative complex
cellular_component	GO:0097344	Rix1 complex
molecular_function	GO:0005515	protein binding