CmUC05G100840 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC05G100840
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	polyadenylate-binding protein RBP47-like
Location	CmU531Chr05: 30023605 .. 30036330 (-)
RNA-Seq Expression	CmUC05G100840
Synteny	CmUC05G100840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAACCTTCCGGTTTGTCGTCATCCTCAAAACTCCAAATAAATCCTCAGGCTTAGACCCTAATCCTCTCCTCTATTCACTTCCCCTTTCGCTAAACTCTTCAGATTCCGATTCTTTTTTCTCTTCTTCCTCTCCTTCAATTCAGATTCTTTTTCCCTTTTGGGTTAGGCTGTACATTAAAATCTGCTTCATTCATTCTTTTGTTTGTTTTTTTGTTTGTTTTTCCACTGTTAATACGGTCGAAGATAAGATGCAGAGCAACAGTTCTGATTCGCAGCCGCAGGAACCAAATCAACGGCATCATCAGCCGCAGCAGCCGTGGATACCAATGCAGTACCCGCCGCCGGCCATGGTAATGCCTCACCATATGATGACGCCGCCCCTCCCCCCGCCGTATATGCATTATCATCACCATTATCAGCATCATCATCTCCCTATTCAGCATTCGCAACCGCTACCGGGATCTGGCGGCGAAAATAAGACGATTTGGGTCGGTGACTTGCATCATTGGATGGACGAGAGTTACCTCAATTCCTGCTTTTCTTCCATTGGCGAGGTTTAGTTTTCTCTCCCTGTACATTACTAGTCTAACAAGTCGTTTCGATGAATTGATGATATGATTATTTGCTGACTTGCTGGAATTTTGATTGTGATAGTTCCCAATTAAATCATTCTTTTTGATTAAGCGATAAATTCTATTCGTTAAATTAAGGGTCTAAATTCTATTCGTTAAATTACTGGAATTTAACAAATCTCAATGAGGAAGGATTGGTAACTGGTATGTGGTAAAGCAACATGGAGGTATGCTTTAAGACTTTATTAGTCCTGTTTAGAATTACTGTATCTTCTAACCTCTCCAATTCACTGCCTATTGAATATTGTGGAAAGGATACGAAGAAATATTTTATTGGACTATGTTATTAATAAATGGAAGATTACATTCTGTAGAGATAGAGAATGTGCAGATTCTATAGTCATGGGAAGATTGCATTATGTCATGATTAGATCATGTCAATTACTAGAGAATGTGTAGCATTTTATTTGAAAAATGTCAATGTCAATTACATTCTCTAGTAAATGGAAGATTACATTCTCTTGCAGTTCAGCTTTAGCGTTCTCTTAGAATCTTTTTTAGTCGAAAAATCTTGAATTGTTCTTAGGTTCGCATGGTCACGTTGAACATTGATTGTTCTATTTTCTGTACGATGCAGATTGCAGCTCTCAAGGTCATTCGTAATAAGCAAACTGGTTTGTCTGAGGGGTATGGATTTGTAGAATTTTTTTCTCATGCAACAGCTGAGAAAGCTCTTCAGAACTATTCCGGAGTGTTCATGCCAAATACAAAGCAAACTTTCCGCCTCAATTGGGCAACATTTAGCACCAGTGACAAGCGATCGGATAATGATCCTGATCTTTCTATTTTTGTTGGAGACTTAGCTGCAGACGTTACTGATTCTTTGTTGTACGAAACATTTTCTAGTAAATTTCCTTCGGTTAAAGCAGCAAAAGTTGTAATTGATGCCAACACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAACGAAAGGTCTCAAGCCATGACTGAAATGAATGGTGTATATTGTTCAAGCAGACCTATGCGCATTGGTGCAGCAACGCCCAAAAAGTCCTCTGGATTTCAGCAAAAGCATTCTCCACAAGGTACATTTTAAATTTAGGGTTTAGTGTGCTTAAGCTTAGCCTAAAACTACTTCCAAGGAGTAGGATTAGTCTTTGGAGAGGGTGTGCAATTCTGGAATAAATGAAAGTATGAAAATTCTCTCTCCCCAGACATTTGGTTCAAGACATGGGGATATGTATCAAAAAAGGGTTATGAAAATGATAACTATAATTGTTCTCCTTAGAAATTTTGTAGCAGTTAATGTTTGTATGTCGAGACATCATGTTAGACAACAGAACACAAAAGCTATCCATTTATGTTGACTTACTTTTTGTAGATGTTTAGTAATTCAGACTGAAGTGGTTCATATGCTTAAACAGGGGTTACTTCCTCCTTATAATTCAGGCTGAAGATCGTATCTATTTGTTATATCTTTCGTTTTTCAGGCGTGCAATAATGCTACGTGTTTATTTAAGCGATTTTCTTTTGTGGAGTTACTTTTATCAATAAGATAGACCATCCAGGGTAAACTTGTGTTAGTAAGTTTTGAATCGAGGCCATTTTTATGGCATTTTCCTTTGACAACTTTAATAGAGTAATCTTATGAAAATTCTCTGTGAATCCTCGAGCAAAAGTAGTTCTGAAATAGCATCTCCAAAGAATTGAACTTTTTGAAATCACTGTCAGTTTGCATATGACATCAAATGAGACAATTTTAAGGGTTTTATTCCTTGAATGCCTGTTTTCTTAGGGTTCACTCAAGGTTGTACACTTCCATACCTCATTTGGACTGCTTATATATATATTGGCCTGTGGTTTTTATAGGAGGATATTCGACAAATGGTTCCTTTAGCCATGGCCTCCAATCTGAAGGAGATTCTGCGAATACAACTGTGAGTTGCTTCTGTTATTTTGTTTGCATCGCTAGAGATTGCACCTCGTATTCTTGGGTTAACCTGAGCTTTCCTTTTAGATATTTGTTGGAGGGCTGGATCCTAATGTCACTGATGAAGATCTGAGACAACCTTTCTTGCAGTATGGTGAGATAGTCTCTGTTAAAATACCAGTTGGTAAAGGATGTGGGTTTGTCCAATTTGCCAACAGGTAAAATTTCTGTAATCAGGTTTTCTTTTCTTATCATATGAACAATGAAATAATAGTATCTATCTGATAATTGGTTTTGTTTATTTACTGAGTCACTAATTTATGTCACATATTCTTCTCAAATTTCCTTTGCAGAAATGATGCTGAAGAGGCTTTGCAGAAACTAAATGCAACTGTAATTGGCAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAATCCAGCAAATAAGCAGGCAAATTACCCTTCTCTCCTACTGTGGAAATGATAACAATATATATACACACATGTATATATTCATCACTCTCTCAATTTCCATGACTTTTAGGAAAACAACTAAAATTAGCTGTTTTTAGGATTCCAATTAAGTCTGAGCTTTACGAATTTCATATGTAATCTTTTGTCATTGACGAAAAAATGGTTTTGCCTAACTGAAAACTCATGTGGTACCATATGTGTACTTTTTATTTGAACCTTTCTCATTTATGGAACCGATTTTGGAAACACTGACCCGAAGAGTGTCTGGTTTACATTGCTTCTATATTCTTATCATTTGAAACGTTGGATTTAGTTGGATAAACAAACCAACGGTTATTTTTCTTGCATTTGTTGAGGTTTGGCAGTTCAGAGATTTTGGGAACCAGTGGAATGGAGCTTACTACGGCCACATATATGATGGCTATGGATATGGTCTGCAACCTCATCACGATCCAAGTATGTATCACGCAGCTTATGGAGCTTACACTGTTTATGGAAGCCATCAACAACAAGTAATCTGAACACGAAAAAGCTCTAATAATTAATCCTTAGGCGCTTTCCAAGTAGAAACGCTGAAGTTGCTTCCACTTCTGAAATTCACTTGGTTTTAGATCTTTTCCATATTAATCGACCTTCCATCTGCCTAGTGGAACTAAATTTTGATGACCTAAGCTAGTTCTCTCATGTCGTAGGGGATATTTATATATTTATTTCATTCAGATTGTTACTCTTACTGAGATTGATAACAAACTTATTCTTTAGAATATATATATGGTCTTGCAATAGAGCATGTATGTTACAATAGTTCAGATTTTCGAATTTTCGAATAGAAAATTGATTTTAAGTTTCATTAACATTAGGTTTATTTTGTGAGAATTTTTGGATGCCTTTTGACATCTTAATTTTATGTATATCAAAATTTTATGTACACTTTGTGAGAATGATGTGCGGCTAGGTTTGTATTGAGTATTTTAAATTGTATATTTGATTTGTGTTATAGGTTATTGTTTTCATTCTATGATTGGAACATATATCAATGAACAGTTTCTAAAAAGTCCACCCGAAATAATAAGATTAATAGTAAAACACGTGCATGGTAGTGATTTTTTCTTAATATTTATTTTACCCTTGGTTTGGTTGGTTTGCACAACTAGAATATTAATTTTAGTGTAAGTGGGGACCTTGTATAATAATCGAGAAATGAATACAGCGTAATTGAGGAAATTAAATACAGTGTAATTGAGGAAATTGTTGGATGGTCCTTGTTAATCAGATTATACATAACATATTCGATTTCAAAATTGAAATCAGCACCATTTTGTGTTTTCACCCTCTTTTTGAATTCAAATCTATTTTTAATATTCATAATAGATTTTCATAACTATTTTTACCAATAGTTCAAAATAATACAATTTATTCCTTATTTTCTCTCTATATTTTTAGTTTGAGATTATTTTTATTATCAAATTAGCTTTGATCATCTTAACAGTTTTCATTATTTCATATATATTTTGATTAAATTTGTTGTATATTTTTCCTTTTTCATTTTAATGGTTTATATCATTTATATATTATCATATTATTATGTTTTTTTTAGAGTTTTTGAGATATATTCACGATCTCAACAAAAGTGGTTGGTATCTACAACTAAATAAGTTCTCTTTTGGGTTGTAGTATATTGTTTTTCCTATGACTTTACCACGAATTAGACTCTTGTTTGATAGTAGATGGGATAAAAAGTTACATTATCATGATGGTAGATGGGATAAAAAGTTACATTATCATGATTCTCGAGTTGTTAAAGTATATATTCCATCAAATTCATCTTTTCATTAGAAAAAAGTTTGTATTGAAGAAAATTTGTATTTCTGAACGGCTAGGGTGATTTACTTGTGCTCTTTTCTATCCAAAGGTAGTTTGTAAAAACCCTAATTTATTTTTATTTGAAATATTTGTTTTAGTTTTGAATTATTTTCTTTTAATTGAAACCTTGCTTAGTGTGATGATAATTACTTGCAGGTGAGATAAGACATTTGTCCTAATGCATCCTGCACTGTGATAATAAAGTGTATTTGTGGTTTTTGGAATGGTTTTGAAATCATCTACCTCCCTAATTTTTAACATTACCTATGTCAGGTTTATTGGGGATAATTTTGGCAACTTCTATTCATTATTTTCAATTATTTAATTTTGTTTGCTATTTAAACAATTTAGCAATAGTTTTGCTATTTTTACAAATTAAACTTTAATTTTTGCCATTAATCTGGCTAGCCCTCTTTTCAAATATAGTTGTATAGAGGGCTCCTTTATTGAGGCTCAAATGAAAAATAGGTACCTTTTTTAAAGTCAATGAATTTTGGTCTTTTGTTTATGTCATCATGGTGTGAAATTAGCATTTTAACCCCAAAATGCATCATTCTTCTTTTTTCTTTGTTTTTCAGCTTTTTCCTTCATTTTTCGAGTTTCTTCTTCTTATTGAGATCAAGTAGCAACATATAACATATAACATACAGCGCAAGTGTAGAGCGTTGAGTGATGTTCTCAGTTGCAAGCATGCGAGCGGTTCTCAAAGTGGAATCCGTGAATTCACAAGTTGCTAACACAAGCAAAATATCACTTTTCATTCAATTTCAAAAAATGTGATCAGTTTTTGTTTGACCCCTAAAAAGAGGCCATCTATATAACGAACCAAAAAGACAACAACAAAGGGTTTGGTTGGTATTGGGGTCGATGGTTTGGCTATACAAGGCAAATATTTGTCACTGTTGGGATTAGGAGAAGTATTTGCCGTTTGAAGTGCTTGCTTTTCAACATTACACTATTTTTCAATCTAATGAGATCCCCACGAATCTAACCCTTTTGATTCTCTACCATTATCATTAGCCACCACAATGCCTTTTGGAATTTTCACAGAATCTTAATCATTCTATTGGCAATCTTTTTCTATGTTCAAATCCATGTGGTATTATATTGCATTTTTTAAAATTATTTTTGTCTTAACATAACACAACCCTCTAATTTTTTGGTCCAACAAGATGAATCTCTTGATATAGTCTCGATAATCATAGTTAAAACACTTATTTCTATCATAATTGAAAACCATATATTTGATAACAAAATAGTCAGACACTTATTCTTAACATGTCTCTTCCTACCCTTCACTCATCTACTTTTACCACTTAAAAGTAAACTTAAGAGAGTTTTACCATTGACTCAATGTTCAATGTTCATTAAAATTTCATTCACTTAAAAATAAAAATACGTCCTCATTATTTAAAAAAAGTGAGCTACCGGTTCAGCTTTAATTTTGTCTAAAAGAAAAGAAATTTACATTTATTATTTTATGCCAATTCAACTCTTCATTATATAGGAGTATAAATACCTATTAGAAAGTAAAGTAATAAATTTTAATTTTAAGGTTAAAAATAAAAATAATCTAATAAGTGATTTAGAAAATGGGATATGGTGGACATCCCTAGTTCAACCTAGTGTATGGATTTGATCCAAATCTCTATGGGCTGGTGGTATTGAATTTGATCCAATAATAACTAGCTCAATTTTTATTTTAAAATATTTAATTATTCTCTCGTTAACATCATTTTTTAAATTTTAACTTTGTTTTTCTTATTTATTAATTTATGTTGATGTTAATTTAATGCGTGATATTTTAAATTAATATTTTATTTAGGGAATAAAAATTTACTTATTTTCTTCTATATTCATAGCTGAAAATCTATCACACTTCTTAATTGATATCTCAAGCATACGTCAAATATATCGGTAATATATTAAAAAATATAAATATACATAACATATCCAACGATTAATTTTTTGGTATGTTTACAAATATACCAAAAAATGTAAATATATATTGCATATATTATTCAATATATAAGACAATATATCAAATTTTTTTCCTAAAGGGTGCAACAATTTTTAAGTCACCCAACTTAGTATTACTCTTGCTAAACATATTTAACTTATGCAATCCATTAGTGTTGCACCTGACATGATTTATTTCTAAAAGTTTCAAATATTATGTATTCTATATATCAAATATACCTGGTATATATAGCAACAGCATTGGCCCAAAAAACCTTCCGGTTTGTCGTCATCCTCAGAACTCCAAATAAAACTTCAGGCTTATACCCTAATCCACTCCTATTCACCACTCCTATTCACTTCCCCTTTCGCTAAACTCTTCAAATTCCGATTCTTTTTTCTCTTCTTCCTCTCCTTCAATTCAGATTCTTTTTCCCTTTTGGGTTAGGCTGTACATTAAAATCTGCTTCATTCATTCTTTTGTTTGTTTGTTTTTCCACTGTCAATACGGAGGAAGATAAGATGCAGAGCAACGGTTCTGATTCGCAGCCGCAGGAACCAAATCAACGGCATCATCAGCCGCAGCAGCCGTGGATACCAATGCAGTACCCGCCGCCGGCCATGGTAATGCCTCACCATATGATGACGCCGCCCCTCCCGCCGCCGTATATGCATTATCATCACCAATATCAGCATCATCATCTCCCTATTCAGCATTCGCAACCGCTACCGGGATCTGGCGGCGAAAATAAGACGATTTGGGTCGGTGACTTGCATCATTGGATGGACGAGAGTTACCTCAATTCCTGCTTTTCTTCCATTGGCGAGGTTTAATTTTCTCTCTTCTTTTTCACTTATCTCTACGTTTATTGTACGCGTTTTTAGTTTGACGATCAATGTGTAACATTCACTCCCTGTACATTACTAGTCTAACAAGTCGTTTCGATGAATTGATAATATGATTATTTGCTGACTTGCTGGAATTTTAATTGTTAAAGTTCTCAATTAAATCACTCTTTTTGATTAATTGATAAATTCTAGTCGTTAAATTAAGGGTGTAAATTCTATTCGTTGAATTATTGGAATTTAACAAATCTCAATGAGAAAGGATTGATAACTGGTATGTGGTAAAACAACATAAAGGTATGTTTTAAGACTTTATTAGTCCTGTTTAGAATTACTGTATCTTCTAACCTCTCCAATTCACTGCCTATTGAATATTGTGGAAAGGATACGAAGAAATATTTTATTAGATTATGTTATTAATAAATGGAAGATTACATTCTGTAGTAATTGGAAGATTGCATTATGTTATGATTAGATTATGTCGATTACTAGAGAATGTGTAGCACTTTGTTTGAAAAATGTCAACGTCAATTACATTCTCTAGTAAATGGAAGATTACATTCTCTTGTAGTTCACCTTTAGTGTTCTCTTAGAATCTTTTTTAGTTGAAAAATCTTGAATTGTTCTTAGGTCTGGTGATGTTGAACGTTGATTGATCTATTTTCTGTATGATGCAGATTGCAGCTCTCAAGGTCATTCGTAATAAGCAAACTGGTTTGTCTGAGGGGTATGGATTTGTAGAATTTTTTTCTCATGCAACAGCTGAGAAAGCTCTTCAGAACTATTCTGGAGTGTTCATGCCAAATACAGAGCAGACTTTCCGCCTCAATTGGGCAACATTTAGCACCGGTGACAAGCGATCAGATAATGATCCTGATCTTTCTATTTTTGTTGGAGACTTAGCTGCAGATGTTACTGATTCTTTGTTGTACGAAACATTTTCTAGTAAATATCCTTCAGTTAAAGCTGCAAAAGTTGTAATTGATGCCAACACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAATGAAAGGTCTCAGGCCATGACCGAAATGAACGGTGTATATTGTTCAAGCAGACCTATGCGCATTGGTGCAGCAACGCCTAGAAAGTCTTCTGGATTTCAGCAACAGCATTCTTCACAAGGTATATTTTTATTTTAGGGTTTAGTGTACTTAGTCTAAAACCACTTCCAAGAAAGAGTAGGATTAGTCATTGGGGAGGGTGTGCAATTCTGGAATAAATGAAAATGTGAAGGTTTTCTTTCTCCCTAGACATTTGGTTCAAGACTTGGGGATATGTATCAAAAAAGGGTTATGAAAATGATTACTACAATGCTAACATAGAAATTTGGGGTTTGATCTTATTGTCCTCCTTAGAAATTTTGTAGCAGTTAATGTTTGTGTGTCAAACATCATGTCAGATAACAGAGCACACAAGCTATCCATTATATTGACTTACTTTTTGTAGATGTGTAATAATTCAGACTGAAGTGGTTCATATGCTCAAACTGGGGTGCAAGCCAGTTTACTTCCTTATAATTCAGGCTAAAGATGGTATCTATTTGTTATATCTTTCATTTTTCAGGCATCCAATAATGCTACATGTTTATTTAAGCGGTTTTCTTTTGTGGAGTTATTTTTATCAATAAGATAGGCCATTCAGGCTAAACTTGTGTTAAGTAAGTTTTGAATTGGAGCCGTTTTTATGGCATTTTCTTTTGACAACTTTTTGTAAAAAAGTTTCTGTGAATCCTCCTTGAGCAAAAGTAGTTCTGAAATAGCATCTTCAAAGAATCGAAGCTTAAGGATTTAATTCTTTGAATGCCTGTTTTCTTAGGGTTTAGTCATGGTTGTACACTTCCATACCTTTTGGACTGCTTATATATATATATATATATTGTCCTCTGGTTTTTATAGGAGGATATTCAACAAATGGTTCCTTTAGCCATGGTCTCCAATCTGATGGAGATTCTGCAAATACAACTGTGAGTTACTTTGATTATTTTTGTTTGCATGGCTAGAGATCCCACCTCATATTCTTGGGTTAACCGGAGCTTTCCTTTTTAGATATTTGTTGGAATTAACCCAAGCTTTCCTTCTAGATATTTGTTGGAGGGCTAGATCCTAATGTCACCGATGAAGATCTGAGACAACCTTTCTTGCAGTATGGTGAGATAGTCTCTGTTAAAATACCAGTTGGTAAAGGATGTGGGTTTGTCCAATTTGCCAACAGGTAAAATTTCTGTAAGCAGGTTTTCTTTTCTTATCATATGAACAATGAAATAATAGTATCTATCTGGTTATTGGTTTTGTTTATTTACTGAGTTACTAATTTTTGTCACATTCTTCTTAAATTTCCTTTGCAGAAATGATGCTGAAGAGGCTTTGCAGAAACTAAATGCAACTGTAATTGGCAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAATCCAGCACATAAGCAGGTAAATTACCCTTCCCTCCTACTGTGAAAATTATTCTATACATCACTCAATTTCCCTGACTTTCCTGGAGGGCAAGGATAGGAAAACAACTAAAATGAGCTGTTTTTAGGATTTTAATTAAGTCTGAGCTTTACTTTGGACGAGGAATTTTTGTGGCCACCTACTTTGGATTAAATATTTATAGGTTTATATCCAATGTAGGGTTAGGCGGGTTGTCATGTAAGAATAGGTGTGCATAAGCTGGCTTAGAAACTCACAAATATTGAAAAAAAAAAAAAAAAACAACTTTGGTTGATGAATTTTCATGTTTAAACTTTCGTCATTGACAAAAAAATGTTTTTGCCTTAACTGAAAACTCATGTGGTACCATATGTGTACTTTTTATTTAAACCTTTCTCATTTTTGGAACTAATTTCGGAAATACATAGCCGAAACATTGCTTCTAAATTCTTATCATTTGATGTGTTCGATTTAGTTGGATAAACAAACTTAACAATACTTTTTTCTTGCATTTGTTGAGGTTTGGCAGTTCAGAGATTTTGGGAACCAGTGGAATGGAGCTTACTACGGAGGCCACATATATAATGGCTATGGATATGGTGTGCAGCCTCATCATGATCCGAGTATGTATCACGCAGCTTATGGAGCTTATACAGTATATGGAAGCCATCAACAACAAGTAATCTGAACCCGAAAAAGCTCTAATTAATCTTTAGGCACTTTCCAAGTAGAAAAGCTGAAGTTGCTTCCACTTCTGGAATTCACTTGGTTTTAGATTTTTTCCATATCAATCATCCTTCCATCTGCCTAGTGGAACTCAATTTTGATGATCTAAGCTAGTTCTCTCATGTCGTAGGGGATATTTATATATTTATTTCATTCAGATTGTTACTCTTACTGAGATTGATAACAAACTTATTTATTAGAATACATATGATCCCGCCATAGTGCATGCATATTACATTGTCTCAGTTCAGATTTTTGGCTTTTCGAAATATAAGATTGACTTTAAATTCATTTATATTATGTTTATTAGGTGAGAATTTTTGGAATGATATGCGGCTAGGTTGGTATTGAGTTGATATATATAGAGGATTTTAAATTGTCAAATTAATTTGTGTTGGGTATTTGTTTTGATTCTATGGTTGGAACATACATCAATTAACAGTTTCTAAGAACTCCACCCTACGCTTGTCTAGACTAGGCGCAACACGTGCAATGTGTGAAGCCTTAAGATCCAAAGTTCTAGGCCTGGGTTTTTTTTTTTTTTTTTTTCCTCAATATTTTGGAAAAGTAATAATAATTAGGATTTTCCTCTTTATTAACTAAGAAATTTACCAAGTCGGAATATAAAATTCATTTGTGTTTAGGATTTTTTTTTAATCATATATATTAATTCAAGACAAATTAGAGTGGAGTTTCAATTTAATTTATTTATTTTATTAGCAATGGAATTAGTTTTTCATGTGATATGCCTTTTTGTTTGGACGAATTTGAGTTTTGGAAAGTCTCAACTCACCTCTGGAGATGGGCTTTTGGCCACTTTGAGTGGTACTACCCACACCCTCTCCTGTTGGATCTGATTCCATCCAAACTTCTCTATCTTCCACTTGTCCCATTTGTATTTTTTTTTTTTTTTTTTGCATTTTGTCCTAATCTTTTTTAAAAAATACAATTTCATTAGTTGCCAATTTGATTGAGCATACAAATATATTTTGGGCTAAATTATAGAAAATGTTTTTGAACTTTGCATTTTGTGTAAAAAATATTTATGAATTTTTAAAATTTTCAATAATACCCTTCAACTTTAAAAAAGAGTTAAAAAAAAACTCTTATCATTAGTTTTAGATGAAAACCGTTAAATTTTTGTTTTAAAAATACCCCTAAACTTTCAAAGTTTGAAAAATATTCTTAAACTCAACTATTAACATATAACTTTGTTAAAATATTTAAGTCCTAAAATCTTGTCTTATTATTATTATTATTTAATTATAATCCATATACCTTAACTGAAGTGGGCACTTTTATTTATCTATTTTAGATATACAAATGACAAACATTTAACAAAAATGTGAGTAGGAGAGTACTGAAGTAGAGAGGAGAAAAAAGAGGGAAAATAGAGAACTAAGATGGTATTAAAGATTTTTGTTGATATAGTAAGAGTATTTTTAATTTTTTTAAAAAAAAGTTTAGGGGTTTTTTGAAACTTTTGAGAGTTCAATGGTGTTTTTGACACAAATGACTAACATTTTCCATCCACAACTAATAATAATGATATTTTTTTTAACTCATTTTGGAAGTTTAATGATTTTTTTTTAAACTTTTGAAGTTAAGAAATATTTTTGACACAAAAATTTAGAGATATTTTATATAATTTAGTCTGTATTTTACGTTGATTTCAATCTTTGCATTTTTACGTGTGATCTAATATTAAAAGAAAGTTATATTAGATGTATTTTTCTTTTTTCTTTTTTTTTGGAAAAAAAAAGAATTCAATGAAGATGCATTCATCCACCTACAACATTGAGGATCCATGTACTACCCTTGATTTGAAATGCCATGAAAATTAG

mRNA sequence

CAAAAACCTTCCGGTTTGTCGTCATCCTCAAAACTCCAAATAAATCCTCAGGCTTAGACCCTAATCCTCTCCTCTATTCACTTCCCCTTTCGCTAAACTCTTCAGATTCCGATTCTTTTTTCTCTTCTTCCTCTCCTTCAATTCAGATTCTTTTTCCCTTTTGGGTTAGGCTGTACATTAAAATCTGCTTCATTCATTCTTTTGTTTGTTTTTTTGTTTGTTTTTCCACTGTTAATACGGTCGAAGATAAGATGCAGAGCAACAGTTCTGATTCGCAGCCGCAGGAACCAAATCAACGGCATCATCAGCCGCAGCAGCCGTGGATACCAATGCAGTACCCGCCGCCGGCCATGGTAATGCCTCACCATATGATGACGCCGCCCCTCCCCCCGCCGTATATGCATTATCATCACCATTATCAGCATCATCATCTCCCTATTCAGCATTCGCAACCGCTACCGGGATCTGGCGGCGAAAATAAGACGATTTGGGTCGGTGACTTGCATCATTGGATGGACGAGAGTTACCTCAATTCCTGCTTTTCTTCCATTGGCGAGATTGCAGCTCTCAAGGTCATTCGTAATAAGCAAACTGGTTTGTCTGAGGGGTATGGATTTGTAGAATTTTTTTCTCATGCAACAGCTGAGAAAGCTCTTCAGAACTATTCCGGAGTGTTCATGCCAAATACAAAGCAAACTTTCCGCCTCAATTGGGCAACATTTAGCACCAGTGACAAGCGATCGGATAATGATCCTGATCTTTCTATTTTTGTTGGAGACTTAGCTGCAGACGTTACTGATTCTTTGTTGTACGAAACATTTTCTAGTAAATTTCCTTCGGTTAAAGCAGCAAAAGTTGTAATTGATGCCAACACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAACGAAAGGTCTCAAGCCATGACTGAAATGAATGGTGTATATTGTTCAAGCAGACCTATGCGCATTGGTGCAGCAACGCCCAAAAAGTCCTCTGGATTTCAGCAAAAGCATTCTCCACAAGATAAGATGCAGAGCAACGGTTCTGATTCGCAGCCGCAGGAACCAAATCAACGGCATCATCAGCCGCAGCAGCCGTGGATACCAATGCAGTACCCGCCGCCGGCCATGGTAATGCCTCACCATATGATGACGCCGCCCCTCCCGCCGCCGTATATGCATTATCATCACCAATATCAGCATCATCATCTCCCTATTCAGCATTCGCAACCGCTACCGGGATCTGGCGGCGAAAATAAGACGATTTGGGTCGGTGACTTGCATCATTGGATGGACGAGAGTTACCTCAATTCCTGCTTTTCTTCCATTGGCGAGATTGCAGCTCTCAAGGTCATTCGTAATAAGCAAACTGGTTTGTCTGAGGGGTATGGATTTGTAGAATTTTTTTCTCATGCAACAGCTGAGAAAGCTCTTCAGAACTATTCTGGAGTGTTCATGCCAAATACAGAGCAGACTTTCCGCCTCAATTGGGCAACATTTAGCACCGGTGACAAGCGATCAGATAATGATCCTGATCTTTCTATTTTTGTTGGAGACTTAGCTGCAGATGTTACTGATTCTTTGTTGTACGAAACATTTTCTAGTAAATATCCTTCAGTTAAAGCTGCAAAAGTTGTAATTGATGCCAACACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAATGAAAGGTCTCAGGCCATGACCGAAATGAACGACCTATGCGCATTGGTGCAGCAACGCCTAGAAAGTCTTCTGGATTTCAGCAACAGCATTCTTCACAAGGAGGATATTCAACAAATGGTTCCTTTAGCCATGGTCTCCAATCTGATGGAGATTCTGCAAATACAACTAAATGATGCTGAAGAGGCTTTGCAGAAACTAAATGCAACTGTAATTGGCAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAATCCAGCACATAAGCAGTTCAGAGATTTTGGGAACCAGTGGAATGGAGCTTACTACGGAGGCCACATATATAATGGCTATGGATATGGTGTGCAGCCTCATCATGATCCGAGTATGTATCACGCAGCTTATGGAGCTTATACAGTATATGGAAGCCATCAACAACAAAATTCAATGAAGATGCATTCATCCACCTACAACATTGAGGATCCATGTACTACCCTTGATTTGAAATGCCATGAAAATTAG

Coding sequence (CDS)

ATGCAGAGCAACAGTTCTGATTCGCAGCCGCAGGAACCAAATCAACGGCATCATCAGCCGCAGCAGCCGTGGATACCAATGCAGTACCCGCCGCCGGCCATGGTAATGCCTCACCATATGATGACGCCGCCCCTCCCCCCGCCGTATATGCATTATCATCACCATTATCAGCATCATCATCTCCCTATTCAGCATTCGCAACCGCTACCGGGATCTGGCGGCGAAAATAAGACGATTTGGGTCGGTGACTTGCATCATTGGATGGACGAGAGTTACCTCAATTCCTGCTTTTCTTCCATTGGCGAGATTGCAGCTCTCAAGGTCATTCGTAATAAGCAAACTGGTTTGTCTGAGGGGTATGGATTTGTAGAATTTTTTTCTCATGCAACAGCTGAGAAAGCTCTTCAGAACTATTCCGGAGTGTTCATGCCAAATACAAAGCAAACTTTCCGCCTCAATTGGGCAACATTTAGCACCAGTGACAAGCGATCGGATAATGATCCTGATCTTTCTATTTTTGTTGGAGACTTAGCTGCAGACGTTACTGATTCTTTGTTGTACGAAACATTTTCTAGTAAATTTCCTTCGGTTAAAGCAGCAAAAGTTGTAATTGATGCCAACACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAACGAAAGGTCTCAAGCCATGACTGAAATGAATGGTGTATATTGTTCAAGCAGACCTATGCGCATTGGTGCAGCAACGCCCAAAAAGTCCTCTGGATTTCAGCAAAAGCATTCTCCACAAGATAAGATGCAGAGCAACGGTTCTGATTCGCAGCCGCAGGAACCAAATCAACGGCATCATCAGCCGCAGCAGCCGTGGATACCAATGCAGTACCCGCCGCCGGCCATGGTAATGCCTCACCATATGATGACGCCGCCCCTCCCGCCGCCGTATATGCATTATCATCACCAATATCAGCATCATCATCTCCCTATTCAGCATTCGCAACCGCTACCGGGATCTGGCGGCGAAAATAAGACGATTTGGGTCGGTGACTTGCATCATTGGATGGACGAGAGTTACCTCAATTCCTGCTTTTCTTCCATTGGCGAGATTGCAGCTCTCAAGGTCATTCGTAATAAGCAAACTGGTTTGTCTGAGGGGTATGGATTTGTAGAATTTTTTTCTCATGCAACAGCTGAGAAAGCTCTTCAGAACTATTCTGGAGTGTTCATGCCAAATACAGAGCAGACTTTCCGCCTCAATTGGGCAACATTTAGCACCGGTGACAAGCGATCAGATAATGATCCTGATCTTTCTATTTTTGTTGGAGACTTAGCTGCAGATGTTACTGATTCTTTGTTGTACGAAACATTTTCTAGTAAATATCCTTCAGTTAAAGCTGCAAAAGTTGTAATTGATGCCAACACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAATGAAAGGTCTCAGGCCATGACCGAAATGAACGACCTATGCGCATTGGTGCAGCAACGCCTAGAAAGTCTTCTGGATTTCAGCAACAGCATTCTTCACAAGGAGGATATTCAACAAATGGTTCCTTTAGCCATGGTCTCCAATCTGATGGAGATTCTGCAAATACAACTAAATGATGCTGAAGAGGCTTTGCAGAAACTAAATGCAACTGTAATTGGCAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAATCCAGCACATAAGCAGTTCAGAGATTTTGGGAACCAGTGGAATGGAGCTTACTACGGAGGCCACATATATAATGGCTATGGATATGGTGTGCAGCCTCATCATGATCCGAGTATGTATCACGCAGCTTATGGAGCTTATACAGTATATGGAAGCCATCAACAACAAAATTCAATGAAGATGCATTCATCCACCTACAACATTGAGGATCCATGTACTACCCTTGATTTGAAATGCCATGAAAATTAG

Protein sequence

MQSNSSDSQPQEPNQRHHQPQQPWIPMQYPPPAMVMPHHMMTPPLPPPYMHYHHHYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTKQTFRLNWATFSTSDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGFQQKHSPQDKMQSNGSDSQPQEPNQRHHQPQQPWIPMQYPPPAMVMPHHMMTPPLPPPYMHYHHQYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNDLCALVQQRLESLLDFSNSILHKEDIQQMVPLAMVSNLMEILQIQLNDAEEALQKLNATVIGKQTVRLSWGRNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAYTVYGSHQQQNSMKMHSSTYNIEDPCTTLDLKCHEN

Homology

[Close]

BLAST of CmUC05G100840 vs. NCBI nr
Match: XP_008452518.1 (PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis melo])

HSP 1 Score: 565.5 bits (1456), Expect = 6.1e-157
Identity = 298/421 (70.78%), Postives = 322/421 (76.48%), Query Frame = 0


Query: 265 MQSNGSDSQPQEPNQRHHQPQQPWI-PMQYPPPAMVMPHHMMT------PPLPPPYMHYH 324
           MQSNGSDSQPQEPNQRH Q  QPWI PMQYPPP MVMPHHMMT      PPLPPPYMHYH
Sbjct: 1   MQSNGSDSQPQEPNQRHQQQPQPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYH 60

Query: 325 HQYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 384
           HQY HHHLPIQHSQPL GSG ENKTIWVGDLHHWMDESYL+SCFSS+GEI+++KVIRNKQ
Sbjct: 61  HQYHHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120

Query: 385 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIF 444
           TGLSEGYGFVEF SHATAEK LQNYSG+FMP+TEQTFRLNWATFSTGDKRSDNDPDLSIF
Sbjct: 121 TGLSEGYGFVEFLSHATAEKVLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 445 VGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 504
           VGDLAADVTDSLLYETFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN
Sbjct: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240

Query: 505 DL-CA--------------------------------LVQQRLESLLDFSNSIL------ 564
            + C+                                   Q L+S  D +N+ +      
Sbjct: 241 GIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 300

Query: 565 --------------HKEDIQQMVPLAMVSNLMEILQIQLNDAEEALQKLNATVIGKQTVR 624
                         H E +   +P+      ++      NDAEEALQKLN TVIGKQTVR
Sbjct: 301 PNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQF--ANRNDAEEALQKLNGTVIGKQTVR 360

Query: 625 LSWGRNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAYTVYGSHQQ 626
           LSWGRNPA+KQFR+FGNQWNGAYYGGHIY+GYGYG+   HDPSMYHAAYGAYTVYG+HQQ
Sbjct: 361 LSWGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQ 419

[Close]

BLAST of CmUC05G100840 vs. NCBI nr
Match: XP_004141245.1 (polyadenylate-binding protein RBP47 [Cucumis sativus] >KAE8649857.1 hypothetical protein Csa_012060 [Cucumis sativus])

HSP 1 Score: 557.8 bits (1436), Expect = 1.3e-154
Identity = 298/424 (70.28%), Postives = 323/424 (76.18%), Query Frame = 0


Query: 265 MQSNGSDSQPQEPNQRHHQPQQPWI-PMQYPPPAMVMPHHMMT------PPLPPPYMHYH 324
           MQ+NGSDSQPQEPNQRH Q   PWI PMQYPPP MVMPHHMMT      PPLPPPYMHYH
Sbjct: 1   MQNNGSDSQPQEPNQRHQQQPHPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYH 60

Query: 325 HQYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 384
           HQY HHHLPIQ SQPL GSG ENKTIWVGDLHHWMDESYL+SCFSS+GEI+++KVIRNKQ
Sbjct: 61  HQYHHHHLPIQPSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120

Query: 385 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIF 444
           TGLSEGYGFVEF SH TAEK LQNYSG+FMP+TEQTFRLNWATFSTGDKRSDNDPDLSIF
Sbjct: 121 TGLSEGYGFVEFLSHTTAEKVLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 445 VGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 504
           VGDLAADVTDSLLYETFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN
Sbjct: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240

Query: 505 DL-CA--------------------------------LVQQRLESLLDFSNSILH----- 564
            + C+                                   Q L+S  D +N+ +      
Sbjct: 241 GIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 300

Query: 565 ----KEDIQQMVPLAMVSNLMEILQIQL--------------NDAEEALQKLNATVIGKQ 624
                ED++Q       S   EI+ +++              NDAEEALQKLN TVIGKQ
Sbjct: 301 PNVTDEDLRQ-----PFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQ 360

Query: 625 TVRLSWGRNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAYTVYGS 626
           TVRLSWGRNPA+KQFRDFGNQWNGAYYGGHIY+GYGYG+   HDPSMYHAAYGAYTVYG+
Sbjct: 361 TVRLSWGRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGN 419

[Close]

BLAST of CmUC05G100840 vs. NCBI nr
Match: XP_022140707.1 (polyadenylate-binding protein RBP47-like [Momordica charantia])

HSP 1 Score: 557.0 bits (1434), Expect = 2.2e-154
Identity = 300/422 (71.09%), Postives = 327/422 (77.49%), Query Frame = 0


Query: 265 MQSNGSDSQPQEPNQRHHQPQQPWIPMQYPPPAMVMPHHMMT------PPLPPPYMHYHH 324
           MQSNGSDSQPQEPNQR  QPQQ W+PMQYPP AMVMP HMMT      PPLPP YMHYHH
Sbjct: 1   MQSNGSDSQPQEPNQRLQQPQQ-WMPMQYPPAAMVMPPHMMTPQPYMPPPLPPQYMHYHH 60

Query: 325 QYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQT 384
           QYQHHHLPIQHSQPL GSGGENKTIWVGDLHHWMDESYL++CF+SIGEI+++KVIRNKQT
Sbjct: 61  QYQHHHLPIQHSQPLQGSGGENKTIWVGDLHHWMDESYLHNCFASIGEISSIKVIRNKQT 120

Query: 385 GLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIFV 444
           GLSEGYGFVEFF+HATAEKALQNYSG+FMPNTEQ FRLNWATFSTGDKRSDNDPDLSIFV
Sbjct: 121 GLSEGYGFVEFFAHATAEKALQNYSGMFMPNTEQAFRLNWATFSTGDKRSDNDPDLSIFV 180

Query: 445 GDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMND 504
           GDLAADVTD+LLYETFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 
Sbjct: 181 GDLAADVTDTLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNG 240

Query: 505 L-CA-------------------------------LVQQRLESLLDFSNSILH------- 564
           + C+                                  Q L+S  D +N+ +        
Sbjct: 241 VYCSSRPMRIGAATPRKSSGYQQQYSSQGGYSSNGSFSQGLQSEGDSANTTIFVGGLDPN 300

Query: 565 --KEDIQQMVPLAMVSNLMEILQIQL--------------NDAEEALQKLNATVIGKQTV 624
              ED++Q       S   EI+ +++              NDAEEALQKLN TVIGKQTV
Sbjct: 301 VTDEDLRQ-----PFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTV 360

Query: 625 RLSWGRNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAYTVYGSHQ 626
           RLSWGRNPA+KQFRDFGNQWNGAYYGGH+Y+GYGYG+ P HDPSMYHAAYGAY VYGSHQ
Sbjct: 361 RLSWGRNPANKQFRDFGNQWNGAYYGGHMYDGYGYGLPP-HDPSMYHAAYGAYPVYGSHQ 415

[Close]

BLAST of CmUC05G100840 vs. NCBI nr
Match: XP_023535397.1 (polyadenylate-binding protein RBP47C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 555.4 bits (1430), Expect = 6.3e-154
Identity = 296/423 (69.98%), Postives = 329/423 (77.78%), Query Frame = 0


Query: 265 MQSNGSDSQPQEPNQRHHQPQQPWIPMQYPPPAMVMPHHMMTPP-------LPPPYMHYH 324
           MQSNGSDSQPQEPNQRH QPQ  W+ MQYPPPAMVMPHHMMTPP        PPPYMHYH
Sbjct: 1   MQSNGSDSQPQEPNQRHQQPQS-WMSMQYPPPAMVMPHHMMTPPHYMAPPLPPPPYMHYH 60

Query: 325 HQYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 384
            QYQHHHLPIQHSQPL GSGGENKTIWVGDLHHWMDESYL++CF+SIGEI+++K+IRNKQ
Sbjct: 61  PQYQHHHLPIQHSQPLQGSGGENKTIWVGDLHHWMDESYLHTCFASIGEISSIKIIRNKQ 120

Query: 385 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIF 444
           +GLSEGYGFVEFF+HATAEKALQNY+GV MP+TEQ FRLNWATFSTGDKRSDNDPDLSIF
Sbjct: 121 SGLSEGYGFVEFFAHATAEKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 445 VGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 504
           VGDLAADVTD+LLY+TFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAM+EMN
Sbjct: 181 VGDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMN 240

Query: 505 DL-CAL-------------------------------VQQRLESLLDFSNSILH------ 564
            + C+                                + Q L+S  D +N+ +       
Sbjct: 241 GVYCSSRPMRIGAATPRKSSGYQQQNSSQGGYSTNGPLSQGLQSEGDSANTTIFVGGLDP 300

Query: 565 ---KEDIQQMVPLAMVSNLMEILQIQL--------------NDAEEALQKLNATVIGKQT 624
               ED++Q       S   EI+ +++              NDAEEALQKLNATVIGKQT
Sbjct: 301 NVTDEDLRQ-----PFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQT 360

Query: 625 VRLSWGRNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAYTVYGSH 626
           +RLSWGRNPA+KQFRDFGNQWNGAYYGGHIY+GYGYG+ P HDPSMYHAAYGAYTVYGSH
Sbjct: 361 IRLSWGRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLPP-HDPSMYHAAYGAYTVYGSH 416

[Close]

BLAST of CmUC05G100840 vs. NCBI nr
Match: XP_022976308.1 (polyadenylate-binding protein RBP47C-like [Cucurbita maxima])

HSP 1 Score: 552.7 bits (1423), Expect = 4.1e-153
Identity = 295/423 (69.74%), Postives = 327/423 (77.30%), Query Frame = 0


Query: 265 MQSNGSDSQPQEPNQRHHQPQQPWIPMQYPPPAMVMPHHMMTPP-------LPPPYMHYH 324
           MQSNGSDSQPQEPNQRH QPQ  W+ MQYPPPAMVMPHHMMTPP        PPPYMHYH
Sbjct: 1   MQSNGSDSQPQEPNQRHQQPQS-WMSMQYPPPAMVMPHHMMTPPHYMAPPLPPPPYMHYH 60

Query: 325 HQYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 384
            QYQHHHLPIQHSQPL GSGGENKTIWVGDLHHWMDESYL++CF+SIGEI+ +K+IRNKQ
Sbjct: 61  PQYQHHHLPIQHSQPLQGSGGENKTIWVGDLHHWMDESYLHTCFASIGEISLIKIIRNKQ 120

Query: 385 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIF 444
           +GLSEGYGFVEFF+HATAEKALQNY+GV MP+TEQ FRLNWATFSTGDKRSDNDPDLSIF
Sbjct: 121 SGLSEGYGFVEFFAHATAEKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 445 VGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 504
           VGDLAADVTD+LLY+TFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAM+EMN
Sbjct: 181 VGDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMN 240

Query: 505 DL-CAL-------------------------------VQQRLESLLDFSNSILH------ 564
            + C+                                + Q L+S  D +N+ +       
Sbjct: 241 GVYCSSRPMRIGAATPRKSSGYQQQNFSQGEYLTNGPLSQGLQSEGDSANTTIFVGGLDP 300

Query: 565 ---KEDIQQMVPLAMVSNLMEILQIQL--------------NDAEEALQKLNATVIGKQT 624
               ED++Q       S   EI+ +++              NDAEEALQKLNATVIGKQT
Sbjct: 301 NVTDEDLRQ-----PFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQT 360

Query: 625 VRLSWGRNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAYTVYGSH 626
           +RLSWGRNPA+KQFRDFGNQWNG YYGGHIY+GYGYG+ P HDPSMYHAAYGAYTVYGSH
Sbjct: 361 IRLSWGRNPANKQFRDFGNQWNGPYYGGHIYDGYGYGLPP-HDPSMYHAAYGAYTVYGSH 416

[Close]

BLAST of CmUC05G100840 vs. ExPASy Swiss-Prot
Match: Q9SX79 (Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C PE=2 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 4.9e-93
Identity = 213/404 (52.72%), Postives = 258/404 (63.86%), Query Frame = 0


Query: 275 QEPNQRHHQPQQPWIPMQYPPPAMVMPHHMMTPPLPPPYMHYHHQYQHHHLPIQH--SQP 334
           +E NQ    P  P   M+Y PP +++PH MM    PPP+  YH    HHHL  Q   ++ 
Sbjct: 36  EEENQPKTSPTPPPHWMRY-PPTVIIPHQMMY--APPPFPPYHQYPNHHHLHHQSRGNKH 95

Query: 335 LPGSGGENKTIWVGDLHHWMDESYLNSCFSS--IGEIAALKVIRNKQTGLSEGYGFVEFF 394
                GENKTIWVGDLHHWMDE+YLNS F+S    EI ++KVIRNK  GLSEGYGFVEF 
Sbjct: 96  QNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFE 155

Query: 395 SHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDND-PDLSIFVGDLAADVTDSL 454
           SH  A+K L+ ++G  MPNT+Q FRLNWA+FSTG+KR +N+ PDLSIFVGDL+ DV+D+L
Sbjct: 156 SHDVADKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNL 215

Query: 455 LYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNDL-CALVQQRLE 514
           L+ETFS KYPSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AMTEMN + C+    R+ 
Sbjct: 216 LHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIG 275

Query: 515 SLL------------------------DFSN---------SILHKEDIQQ---------- 574
                                      D  N         S +  ED++Q          
Sbjct: 276 PATPRKTNGYQQQGGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVS 335

Query: 575 -MVPLAMVSNLMEILQIQLNDAEEALQKLNATVIGKQTVRLSWGRNPAHKQFRD-FGNQW 628
             +P+      ++   +   +AEEAL+KLN TVIGKQTVRLSWGRNPA+KQ RD +GNQW
Sbjct: 336 VKIPVGKGCGFVQF--VNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW 395

[Close]

BLAST of CmUC05G100840 vs. ExPASy Swiss-Prot
Match: Q9SX80 (Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C' PE=2 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.0e-90
Identity = 214/406 (52.71%), Postives = 255/406 (62.81%), Query Frame = 0


Query: 276 EPNQRHHQPQQP---WIPMQYPPPAMVMPHHMMTPPLPPPYMHYHHQYQHHHLPIQH--S 335
           E NQ    P  P   W  M+YPP  ++MP  M  PP P P+  YH    HHH   Q   +
Sbjct: 37  EENQPKTSPTPPPPHW--MRYPP--VLMPQMMYAPPPPMPFSPYHQYPNHHHFHHQSRGN 96

Query: 336 QPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSI--GEIAALKVIRNKQTGLSEGYGFVE 395
           +      GENKTIWVGDL +WMDE+YLNS F+S    EI +LKVIRNK  G SEGYGFVE
Sbjct: 97  KHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVE 156

Query: 396 FFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDND-PDLSIFVGDLAADVTD 455
           F SH  A+K LQ ++G  MPNT+Q FRLNWA+FSTG+KR +N+ PDLSIFVGDLA DV+D
Sbjct: 157 FESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSD 216

Query: 456 SLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNDL-CALVQQR 515
           +LL+ETFS KYPSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AMTEMN + C+    R
Sbjct: 217 ALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMR 276

Query: 516 L------------------------ESLLDFSN---------SILHKEDIQQ-------- 575
           +                         S  D  N         S +  ED++Q        
Sbjct: 277 IGPATPRKTNGYQQQGGYMPSGAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEI 336

Query: 576 ---MVPLAMVSNLMEILQIQLNDAEEALQKLNATVIGKQTVRLSWGRNPAHKQFRD-FGN 628
               +P+      ++   +   +AEEAL+KLN TVIGKQTVRLSWGRNPA+KQ RD +GN
Sbjct: 337 VSVKIPVGKGCGFVQF--VNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGN 396

[Close]

BLAST of CmUC05G100840 vs. ExPASy Swiss-Prot
Match: Q9LEB3 (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.4e-86
Identity = 198/427 (46.37%), Postives = 253/427 (59.25%), Query Frame = 0


Query: 268 NGSD-SQPQEPNQRHHQP-----------QQPWIPMQYPPPAMVMPHHMMTPPLPPPYMH 327
           NG D +Q Q+  Q+ HQ            QQ W+ MQYP  AM M   MM       YM 
Sbjct: 2   NGGDMNQQQQQQQQQHQQQQQQWLAMQQYQQQWMAMQYPAAAMAMQQQMM---YGQQYMP 61

Query: 328 YHHQYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRN 387
           Y+ Q+Q      Q    +  S  +NKTIW+GDL  WMDESYL+SCFS  GE+ ++K+IRN
Sbjct: 62  YYQQHQQQQKMQQSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRN 121

Query: 388 KQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLS 447
           KQTG SE YGFVEF +HA AEK LQ+Y+G  MPNTEQ FRLNWA FSTG+KR++   D S
Sbjct: 122 KQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFS 181

Query: 448 IFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTE 507
           IFVGDLA+DVTD++L +TF+S+YPS+K AKVV+DANTG SKGYGFVRFGD++ERS+AMTE
Sbjct: 182 IFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTE 241

Query: 508 MNDL-CALVQQRL-----------------------------------ESLLDFSNSILH 567
           MN + C+    R+                                   +S  D SN+ + 
Sbjct: 242 MNGVYCSSRAMRIGVATPKKPSAHEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIF 301

Query: 568 KEDIQQMVP----LAMVSNLMEILQIQL--------------NDAEEALQKLNATVIGKQ 625
              +   V         +   E++ +++              + A+EA+QKL+  +IGKQ
Sbjct: 302 VGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQ 361

[Close]

BLAST of CmUC05G100840 vs. ExPASy Swiss-Prot
Match: Q0WW84 (Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B PE=1 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.4e-81
Identity = 195/410 (47.56%), Postives = 240/410 (58.54%), Query Frame = 0


Query: 274 PQEPNQRHHQPQQPWIPMQYPPPA---------MVMPHHMMTPPLPPPYMHYH---HQY- 333
           PQ+  Q+  Q QQ    MQYPP A         M+M  H   P    PY  +H   HQY 
Sbjct: 27  PQQWQQQQQQQQQWMAAMQYPPAAAMMMMQQQQMLMYPHQYVPYNQGPYQQHHPQLHQYG 86

Query: 334 ---QHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 393
              QH H   QH     GSG + KT+WVGDL HWMDE+YL+SCFS  GE++++KVIRNK 
Sbjct: 87  SYQQHQHQ--QHKAIDRGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKL 146

Query: 394 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRS-DNDPDLSI 453
           T  SEGYGFVEF S A AE+ LQNYSG  MPN++Q FR+NWA+FSTG+KR+ +N PDLS+
Sbjct: 147 TSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSV 206

Query: 454 FVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEM 513
           FVGDL+ DVTD LL+ETFS +YPSVK+AKVVID+NTGRSKGYGFVRFGD+NERS+A+TEM
Sbjct: 207 FVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEM 266

Query: 514 ND-LCALVQQRLESLLDFSNSILHKEDIQQMVPLA------------------------- 573
           N   C+  Q R+            ++   Q V LA                         
Sbjct: 267 NGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIF 326

Query: 574 ---------------MVSNLMEILQIQL--------------NDAEEALQKLNATVIGKQ 611
                            S   E++ +++                AE+A++ LN TVIGK 
Sbjct: 327 VGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKN 386

[Close]

BLAST of CmUC05G100840 vs. ExPASy Swiss-Prot
Match: F4I3B3 (Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.4e-78
Identity = 197/418 (47.13%), Postives = 246/418 (58.85%), Query Frame = 0


Query: 270 SDSQPQEPNQRHHQPQQPWIP--MQYPPPAMVMPHHMMTPPLPPP--------------- 329
           S   PQ+  Q+  Q QQ W+    QYP  AM M         P P               
Sbjct: 30  STPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHPQYAPYNQAAYQQHPQ 89

Query: 330 --YMHYHHQYQHHHLPIQHSQPLPGSGGEN-KTIWVGDLHHWMDESYLNSCFSSIGEIAA 389
             Y  Y  Q Q HH   Q  QP  GSGG++ KT+WVGDL HWMDE+YL++CFS   E+++
Sbjct: 90  FQYAAYQQQQQQHHQSQQ--QPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSS 149

Query: 390 LKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKR-S 449
           +KVIRNKQT  SEGYGFVEF S + AE+ALQ++SGV MPN EQ FRLNWA+FSTG+KR S
Sbjct: 150 VKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRAS 209

Query: 450 DNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNE 509
           +N PDLSIFVGDLA DV+D++L ETF+ +YPSVK AKVVID+NTGRSKGYGFVRFGD+NE
Sbjct: 210 ENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENE 269

Query: 510 RSQAMTEMND-LCALVQQRL-----------------ESLL--------------DFSNS 569
           RS+AMTEMN   C+  Q R+                 ++L               + +NS
Sbjct: 270 RSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMSDGESNNS 329

Query: 570 ILH----KEDIQQMVPLAMVSNLMEILQIQL--------------NDAEEALQKLNATVI 616
            +       D+ +   +   S+  E++ +++                AEEA+  LN TVI
Sbjct: 330 TIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVI 389

[Close]

BLAST of CmUC05G100840 vs. ExPASy TrEMBL
Match: A0A0A0L4T7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639100 PE=4 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 1.6e-158
Identity = 290/369 (78.59%), Postives = 312/369 (84.55%), Query Frame = 0


Query: 265 MQSNGSDSQPQEPNQRHHQPQQPWI-PMQYPPPAMVMPHHMMT------PPLPPPYMHYH 324
           MQ+NGSDSQPQEPNQRH Q   PWI PMQYPPP MVMPHHMMT      PPLPPPYMHYH
Sbjct: 1   MQNNGSDSQPQEPNQRHQQQPHPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYH 60

Query: 325 HQYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 384
           HQY HHHLPIQ SQPL GSG ENKTIWVGDLHHWMDESYL+SCFSS+GEI+++KVIRNKQ
Sbjct: 61  HQYHHHHLPIQPSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120

Query: 385 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIF 444
           TGLSEGYGFVEF SH TAEK LQNYSG+FMP+TEQTFRLNWATFSTGDKRSDNDPDLSIF
Sbjct: 121 TGLSEGYGFVEFLSHTTAEKVLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 445 VGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 504
           VGDLAADVTDSLLYETFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN
Sbjct: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240

Query: 505 DL-CALVQQRLESLLDFSNSILHKEDIQQMVPLAMVSNLMEILQIQLNDAEEALQKLNAT 564
            + C+    R+ +     +S   ++   Q     ++           NDAEEALQKLN T
Sbjct: 241 GIYCSSRPMRIGAATPRKSSGYQQQHSSQGGKKFVIR----------NDAEEALQKLNGT 300

Query: 565 VIGKQTVRLSWGRNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAY 624
           VIGKQTVRLSWGRNPA+KQFRDFGNQWNGAYYGGHIY+GYGYG+   HDPSMYHAAYGAY
Sbjct: 301 VIGKQTVRLSWGRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAY 359

Query: 625 TVYGSHQQQ 626
           TVYG+HQQQ
Sbjct: 361 TVYGNHQQQ 359

[Close]

BLAST of CmUC05G100840 vs. ExPASy TrEMBL
Match: A0A1S3BUU0 (polyadenylate-binding protein RBP47-like OS=Cucumis melo OX=3656 GN=LOC103493523 PE=4 SV=1)

HSP 1 Score: 565.5 bits (1456), Expect = 3.0e-157
Identity = 298/421 (70.78%), Postives = 322/421 (76.48%), Query Frame = 0


Query: 265 MQSNGSDSQPQEPNQRHHQPQQPWI-PMQYPPPAMVMPHHMMT------PPLPPPYMHYH 324
           MQSNGSDSQPQEPNQRH Q  QPWI PMQYPPP MVMPHHMMT      PPLPPPYMHYH
Sbjct: 1   MQSNGSDSQPQEPNQRHQQQPQPWIPPMQYPPPPMVMPHHMMTPQHYMAPPLPPPYMHYH 60

Query: 325 HQYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 384
           HQY HHHLPIQHSQPL GSG ENKTIWVGDLHHWMDESYL+SCFSS+GEI+++KVIRNKQ
Sbjct: 61  HQYHHHHLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120

Query: 385 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIF 444
           TGLSEGYGFVEF SHATAEK LQNYSG+FMP+TEQTFRLNWATFSTGDKRSDNDPDLSIF
Sbjct: 121 TGLSEGYGFVEFLSHATAEKVLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 445 VGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 504
           VGDLAADVTDSLLYETFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN
Sbjct: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240

Query: 505 DL-CA--------------------------------LVQQRLESLLDFSNSIL------ 564
            + C+                                   Q L+S  D +N+ +      
Sbjct: 241 GIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 300

Query: 565 --------------HKEDIQQMVPLAMVSNLMEILQIQLNDAEEALQKLNATVIGKQTVR 624
                         H E +   +P+      ++      NDAEEALQKLN TVIGKQTVR
Sbjct: 301 PNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQF--ANRNDAEEALQKLNGTVIGKQTVR 360

Query: 625 LSWGRNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAYTVYGSHQQ 626
           LSWGRNPA+KQFR+FGNQWNGAYYGGHIY+GYGYG+   HDPSMYHAAYGAYTVYG+HQQ
Sbjct: 361 LSWGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQ 419

[Close]

BLAST of CmUC05G100840 vs. ExPASy TrEMBL
Match: A0A6J1CHT5 (polyadenylate-binding protein RBP47-like OS=Momordica charantia OX=3673 GN=LOC111011304 PE=4 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 1.1e-154
Identity = 300/422 (71.09%), Postives = 327/422 (77.49%), Query Frame = 0


Query: 265 MQSNGSDSQPQEPNQRHHQPQQPWIPMQYPPPAMVMPHHMMT------PPLPPPYMHYHH 324
           MQSNGSDSQPQEPNQR  QPQQ W+PMQYPP AMVMP HMMT      PPLPP YMHYHH
Sbjct: 1   MQSNGSDSQPQEPNQRLQQPQQ-WMPMQYPPAAMVMPPHMMTPQPYMPPPLPPQYMHYHH 60

Query: 325 QYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQT 384
           QYQHHHLPIQHSQPL GSGGENKTIWVGDLHHWMDESYL++CF+SIGEI+++KVIRNKQT
Sbjct: 61  QYQHHHLPIQHSQPLQGSGGENKTIWVGDLHHWMDESYLHNCFASIGEISSIKVIRNKQT 120

Query: 385 GLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIFV 444
           GLSEGYGFVEFF+HATAEKALQNYSG+FMPNTEQ FRLNWATFSTGDKRSDNDPDLSIFV
Sbjct: 121 GLSEGYGFVEFFAHATAEKALQNYSGMFMPNTEQAFRLNWATFSTGDKRSDNDPDLSIFV 180

Query: 445 GDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMND 504
           GDLAADVTD+LLYETFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 
Sbjct: 181 GDLAADVTDTLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNG 240

Query: 505 L-CA-------------------------------LVQQRLESLLDFSNSILH------- 564
           + C+                                  Q L+S  D +N+ +        
Sbjct: 241 VYCSSRPMRIGAATPRKSSGYQQQYSSQGGYSSNGSFSQGLQSEGDSANTTIFVGGLDPN 300

Query: 565 --KEDIQQMVPLAMVSNLMEILQIQL--------------NDAEEALQKLNATVIGKQTV 624
              ED++Q       S   EI+ +++              NDAEEALQKLN TVIGKQTV
Sbjct: 301 VTDEDLRQ-----PFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTV 360

Query: 625 RLSWGRNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAYTVYGSHQ 626
           RLSWGRNPA+KQFRDFGNQWNGAYYGGH+Y+GYGYG+ P HDPSMYHAAYGAY VYGSHQ
Sbjct: 361 RLSWGRNPANKQFRDFGNQWNGAYYGGHMYDGYGYGLPP-HDPSMYHAAYGAYPVYGSHQ 415

[Close]

BLAST of CmUC05G100840 vs. ExPASy TrEMBL
Match: A0A6J1ILR0 (polyadenylate-binding protein RBP47C-like OS=Cucurbita maxima OX=3661 GN=LOC111476746 PE=4 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 2.0e-153
Identity = 295/423 (69.74%), Postives = 327/423 (77.30%), Query Frame = 0


Query: 265 MQSNGSDSQPQEPNQRHHQPQQPWIPMQYPPPAMVMPHHMMTPP-------LPPPYMHYH 324
           MQSNGSDSQPQEPNQRH QPQ  W+ MQYPPPAMVMPHHMMTPP        PPPYMHYH
Sbjct: 1   MQSNGSDSQPQEPNQRHQQPQS-WMSMQYPPPAMVMPHHMMTPPHYMAPPLPPPPYMHYH 60

Query: 325 HQYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 384
            QYQHHHLPIQHSQPL GSGGENKTIWVGDLHHWMDESYL++CF+SIGEI+ +K+IRNKQ
Sbjct: 61  PQYQHHHLPIQHSQPLQGSGGENKTIWVGDLHHWMDESYLHTCFASIGEISLIKIIRNKQ 120

Query: 385 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIF 444
           +GLSEGYGFVEFF+HATAEKALQNY+GV MP+TEQ FRLNWATFSTGDKRSDNDPDLSIF
Sbjct: 121 SGLSEGYGFVEFFAHATAEKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 445 VGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 504
           VGDLAADVTD+LLY+TFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAM+EMN
Sbjct: 181 VGDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMN 240

Query: 505 DL-CAL-------------------------------VQQRLESLLDFSNSILH------ 564
            + C+                                + Q L+S  D +N+ +       
Sbjct: 241 GVYCSSRPMRIGAATPRKSSGYQQQNFSQGEYLTNGPLSQGLQSEGDSANTTIFVGGLDP 300

Query: 565 ---KEDIQQMVPLAMVSNLMEILQIQL--------------NDAEEALQKLNATVIGKQT 624
               ED++Q       S   EI+ +++              NDAEEALQKLNATVIGKQT
Sbjct: 301 NVTDEDLRQ-----PFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQT 360

Query: 625 VRLSWGRNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAYTVYGSH 626
           +RLSWGRNPA+KQFRDFGNQWNG YYGGHIY+GYGYG+ P HDPSMYHAAYGAYTVYGSH
Sbjct: 361 IRLSWGRNPANKQFRDFGNQWNGPYYGGHIYDGYGYGLPP-HDPSMYHAAYGAYTVYGSH 416

[Close]

BLAST of CmUC05G100840 vs. ExPASy TrEMBL
Match: A0A6J1FCI8 (polyadenylate-binding protein RBP47C-like OS=Cucurbita moschata OX=3662 GN=LOC111442850 PE=4 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 2.0e-153
Identity = 296/423 (69.98%), Postives = 327/423 (77.30%), Query Frame = 0


Query: 265 MQSNGSDSQPQEPNQRHHQPQQPWIPMQYPPPAMVMPHHMMTPP-------LPPPYMHYH 324
           MQSNGSDSQPQEPNQRH QPQ  W+ MQYPPPAMVMPHHMMTPP        PPPYMHYH
Sbjct: 1   MQSNGSDSQPQEPNQRHQQPQS-WMSMQYPPPAMVMPHHMMTPPHYMAPPLPPPPYMHYH 60

Query: 325 HQYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 384
            QYQHHHLPIQHSQPL GSGGENKTIWVGDLHHWMDESYL++CF+SIGEIA++K+IRNKQ
Sbjct: 61  PQYQHHHLPIQHSQPLQGSGGENKTIWVGDLHHWMDESYLHNCFASIGEIASIKIIRNKQ 120

Query: 385 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIF 444
           +GLSEGYGFVEFF+HATAEKALQNY+GV MP+TEQ FRLNWATFSTGDKRSDNDPDLSIF
Sbjct: 121 SGLSEGYGFVEFFAHATAEKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 445 VGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 504
           VGDLAADVTD+LLY+TFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAM+EMN
Sbjct: 181 VGDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMN 240

Query: 505 DL-CAL-------------------------------VQQRLESLLDFSNSILH------ 564
            + C+                                  Q L+S  D +N+ +       
Sbjct: 241 GVYCSSRPMRIGAATPRKSSGYQQQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDP 300

Query: 565 ---KEDIQQMVPLAMVSNLMEILQIQL--------------NDAEEALQKLNATVIGKQT 624
               ED++Q       S   EI+ +++              NDAEEALQKLNATVIGKQT
Sbjct: 301 NVTDEDLRQ-----PFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQT 360

Query: 625 VRLSWGRNPAHKQFRDFGNQWNGAYYGGHIYNGYGYGVQPHHDPSMYHAAYGAYTVYGSH 626
           +RLSWGRNPA+KQFRDFGNQWNGAYYGGHIY+GYGYG+ P HDPSMY AAYGAYTVYGSH
Sbjct: 361 IRLSWGRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLPP-HDPSMYQAAYGAYTVYGSH 416

[Close]

BLAST of CmUC05G100840 vs. TAIR 10
Match: AT1G47490.1 (RNA-binding protein 47C )

HSP 1 Score: 343.6 bits (880), Expect = 3.5e-94
Identity = 213/404 (52.72%), Postives = 258/404 (63.86%), Query Frame = 0


Query: 275 QEPNQRHHQPQQPWIPMQYPPPAMVMPHHMMTPPLPPPYMHYHHQYQHHHLPIQH--SQP 334
           +E NQ    P  P   M+Y PP +++PH MM    PPP+  YH    HHHL  Q   ++ 
Sbjct: 36  EEENQPKTSPTPPPHWMRY-PPTVIIPHQMMY--APPPFPPYHQYPNHHHLHHQSRGNKH 95

Query: 335 LPGSGGENKTIWVGDLHHWMDESYLNSCFSS--IGEIAALKVIRNKQTGLSEGYGFVEFF 394
                GENKTIWVGDLHHWMDE+YLNS F+S    EI ++KVIRNK  GLSEGYGFVEF 
Sbjct: 96  QNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFE 155

Query: 395 SHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDND-PDLSIFVGDLAADVTDSL 454
           SH  A+K L+ ++G  MPNT+Q FRLNWA+FSTG+KR +N+ PDLSIFVGDL+ DV+D+L
Sbjct: 156 SHDVADKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNL 215

Query: 455 LYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNDL-CALVQQRLE 514
           L+ETFS KYPSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AMTEMN + C+    R+ 
Sbjct: 216 LHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIG 275

Query: 515 SLL------------------------DFSN---------SILHKEDIQQ---------- 574
                                      D  N         S +  ED++Q          
Sbjct: 276 PATPRKTNGYQQQGGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVS 335

Query: 575 -MVPLAMVSNLMEILQIQLNDAEEALQKLNATVIGKQTVRLSWGRNPAHKQFRD-FGNQW 628
             +P+      ++   +   +AEEAL+KLN TVIGKQTVRLSWGRNPA+KQ RD +GNQW
Sbjct: 336 VKIPVGKGCGFVQF--VNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW 395

[Close]

BLAST of CmUC05G100840 vs. TAIR 10
Match: AT1G47500.1 (RNA-binding protein 47C' )

HSP 1 Score: 335.9 bits (860), Expect = 7.3e-92
Identity = 214/406 (52.71%), Postives = 255/406 (62.81%), Query Frame = 0


Query: 276 EPNQRHHQPQQP---WIPMQYPPPAMVMPHHMMTPPLPPPYMHYHHQYQHHHLPIQH--S 335
           E NQ    P  P   W  M+YPP  ++MP  M  PP P P+  YH    HHH   Q   +
Sbjct: 37  EENQPKTSPTPPPPHW--MRYPP--VLMPQMMYAPPPPMPFSPYHQYPNHHHFHHQSRGN 96

Query: 336 QPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSI--GEIAALKVIRNKQTGLSEGYGFVE 395
           +      GENKTIWVGDL +WMDE+YLNS F+S    EI +LKVIRNK  G SEGYGFVE
Sbjct: 97  KHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVE 156

Query: 396 FFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDND-PDLSIFVGDLAADVTD 455
           F SH  A+K LQ ++G  MPNT+Q FRLNWA+FSTG+KR +N+ PDLSIFVGDLA DV+D
Sbjct: 157 FESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSD 216

Query: 456 SLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNDL-CALVQQR 515
           +LL+ETFS KYPSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AMTEMN + C+    R
Sbjct: 217 ALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMR 276

Query: 516 L------------------------ESLLDFSN---------SILHKEDIQQ-------- 575
           +                         S  D  N         S +  ED++Q        
Sbjct: 277 IGPATPRKTNGYQQQGGYMPSGAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEI 336

Query: 576 ---MVPLAMVSNLMEILQIQLNDAEEALQKLNATVIGKQTVRLSWGRNPAHKQFRD-FGN 628
               +P+      ++   +   +AEEAL+KLN TVIGKQTVRLSWGRNPA+KQ RD +GN
Sbjct: 337 VSVKIPVGKGCGFVQF--VNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGN 396

[Close]

BLAST of CmUC05G100840 vs. TAIR 10
Match: AT3G19130.1 (RNA-binding protein 47B )

HSP 1 Score: 303.1 bits (775), Expect = 5.3e-82
Identity = 195/410 (47.56%), Postives = 240/410 (58.54%), Query Frame = 0


Query: 274 PQEPNQRHHQPQQPWIPMQYPPPA---------MVMPHHMMTPPLPPPYMHYH---HQY- 333
           PQ+  Q+  Q QQ    MQYPP A         M+M  H   P    PY  +H   HQY 
Sbjct: 27  PQQWQQQQQQQQQWMAAMQYPPAAAMMMMQQQQMLMYPHQYVPYNQGPYQQHHPQLHQYG 86

Query: 334 ---QHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 393
              QH H   QH     GSG + KT+WVGDL HWMDE+YL+SCFS  GE++++KVIRNK 
Sbjct: 87  SYQQHQHQ--QHKAIDRGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKL 146

Query: 394 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRS-DNDPDLSI 453
           T  SEGYGFVEF S A AE+ LQNYSG  MPN++Q FR+NWA+FSTG+KR+ +N PDLS+
Sbjct: 147 TSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSV 206

Query: 454 FVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEM 513
           FVGDL+ DVTD LL+ETFS +YPSVK+AKVVID+NTGRSKGYGFVRFGD+NERS+A+TEM
Sbjct: 207 FVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEM 266

Query: 514 ND-LCALVQQRLESLLDFSNSILHKEDIQQMVPLA------------------------- 573
           N   C+  Q R+            ++   Q V LA                         
Sbjct: 267 NGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIF 326

Query: 574 ---------------MVSNLMEILQIQL--------------NDAEEALQKLNATVIGKQ 611
                            S   E++ +++                AE+A++ LN TVIGK 
Sbjct: 327 VGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKN 386

[Close]

BLAST of CmUC05G100840 vs. TAIR 10
Match: AT1G49600.1 (RNA-binding protein 47A )

HSP 1 Score: 294.3 bits (752), Expect = 2.4e-79
Identity = 197/418 (47.13%), Postives = 246/418 (58.85%), Query Frame = 0


Query: 270 SDSQPQEPNQRHHQPQQPWIP--MQYPPPAMVMPHHMMTPPLPPP--------------- 329
           S   PQ+  Q+  Q QQ W+    QYP  AM M         P P               
Sbjct: 30  STPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHPQYAPYNQAAYQQHPQ 89

Query: 330 --YMHYHHQYQHHHLPIQHSQPLPGSGGEN-KTIWVGDLHHWMDESYLNSCFSSIGEIAA 389
             Y  Y  Q Q HH   Q  QP  GSGG++ KT+WVGDL HWMDE+YL++CFS   E+++
Sbjct: 90  FQYAAYQQQQQQHHQSQQ--QPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSS 149

Query: 390 LKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKR-S 449
           +KVIRNKQT  SEGYGFVEF S + AE+ALQ++SGV MPN EQ FRLNWA+FSTG+KR S
Sbjct: 150 VKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRAS 209

Query: 450 DNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNE 509
           +N PDLSIFVGDLA DV+D++L ETF+ +YPSVK AKVVID+NTGRSKGYGFVRFGD+NE
Sbjct: 210 ENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENE 269

Query: 510 RSQAMTEMND-LCALVQQRL-----------------ESLL--------------DFSNS 569
           RS+AMTEMN   C+  Q R+                 ++L               + +NS
Sbjct: 270 RSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMSDGESNNS 329

Query: 570 ILH----KEDIQQMVPLAMVSNLMEILQIQL--------------NDAEEALQKLNATVI 616
            +       D+ +   +   S+  E++ +++                AEEA+  LN TVI
Sbjct: 330 TIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVI 389

[Close]

BLAST of CmUC05G100840 vs. TAIR 10
Match: AT1G47490.2 (RNA-binding protein 47C )

HSP 1 Score: 292.7 bits (748), Expect = 7.1e-79
Identity = 170/297 (57.24%), Postives = 209/297 (70.37%), Query Frame = 0


Query: 2   QSNSSDSQP------------------QEPNQRHHQPQQPWIPMQYPPPAMVMPHHMMTP 61
           +S SSDS P                  +E NQ    P  P   M+Y PP +++PH MM  
Sbjct: 9   ESESSDSHPVVDNQPPPPPPPPQQPAKEEENQPKTSPTPPPHWMRY-PPTVIIPHQMMY- 68

Query: 62  PLPPPYMHYHHHYQHHHLPIQH--SQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSS-- 121
             PPP+  YH +  HHHL  Q   ++      GENKTIWVGDLHHWMDE+YLNS F+S  
Sbjct: 69  -APPPFPPYHQYPNHHHLHHQSRGNKHQNAFNGENKTIWVGDLHHWMDEAYLNSSFASGD 128

Query: 122 IGEIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTKQTFRLNWATFST 181
             EI ++KVIRNK  GLSEGYGFVEF SH  A+K L+ ++G  MPNT Q FRLNWA+FST
Sbjct: 129 EREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASFST 188

Query: 182 SDKRSDND-PDLSIFVGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVR 241
            +KR +N+ PDLSIFVGDL+ DV+D+LL+ETFS K+PSVKAAKVV+DANTGRSKGYGFVR
Sbjct: 189 GEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVR 248

Query: 242 FGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGFQQKHSPQDKMQSNGSDSQPQ 276
           FGD+NER++AMTEMNGV CSSR MRIG ATP+K++G+QQ    Q     NG+ ++P+
Sbjct: 249 FGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ----QGGYMPNGTLTRPE 298

The following BLAST results are available for this feature:

BLAST of CmUC05G100840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452518.1	6.1e-157	70.78	PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis melo]	[more]
XP_004141245.1	1.3e-154	70.28	polyadenylate-binding protein RBP47 [Cucumis sativus] >KAE8649857.1 hypothetical...	[more]
XP_022140707.1	2.2e-154	71.09	polyadenylate-binding protein RBP47-like [Momordica charantia]	[more]
XP_023535397.1	6.3e-154	69.98	polyadenylate-binding protein RBP47C-like [Cucurbita pepo subsp. pepo]	[more]
XP_022976308.1	4.1e-153	69.74	polyadenylate-binding protein RBP47C-like [Cucurbita maxima]	[more]

BLAST of CmUC05G100840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX79	4.9e-93	52.72	Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C P...	[more]
Q9SX80	1.0e-90	52.71	Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C'...	[more]
Q9LEB3	3.4e-86	46.37	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q0WW84	7.4e-81	47.56	Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B P...	[more]
F4I3B3	3.4e-78	47.13	Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A P...	[more]

BLAST of CmUC05G100840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4T7	1.6e-158	78.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639100 PE=4 SV=1	[more]
A0A1S3BUU0	3.0e-157	70.78	polyadenylate-binding protein RBP47-like OS=Cucumis melo OX=3656 GN=LOC103493523...	[more]
A0A6J1CHT5	1.1e-154	71.09	polyadenylate-binding protein RBP47-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1ILR0	2.0e-153	69.74	polyadenylate-binding protein RBP47C-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1FCI8	2.0e-153	69.98	polyadenylate-binding protein RBP47C-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of CmUC05G100840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47490.1	3.5e-94	52.72	RNA-binding protein 47C	[more]
AT1G47500.1	7.3e-92	52.71	RNA-binding protein 47C'	[more]
AT3G19130.1	5.3e-82	47.56	RNA-binding protein 47B	[more]
AT1G49600.1	2.4e-79	47.13	RNA-binding protein 47A	[more]
AT1G47490.2	7.1e-79	57.24	RNA-binding protein 47C	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 529..556
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..286
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 245..294
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 282..499
None	No IPR available	PANTHER	PTHR47640:SF16	POLYADENYLATE-BINDING PROTEIN RBP47C-RELATED	coord: 542..626
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 17..273
None	No IPR available	PANTHER	PTHR47640:SF16	POLYADENYLATE-BINDING PROTEIN RBP47C-RELATED	coord: 17..273 coord: 282..499
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 542..626
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 169..248 e-value: 4.42353E-46 score: 155.9
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 342..422 e-value: 4.63778E-42 score: 144.713
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 78..158 e-value: 4.02737E-42 score: 145.098
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 342..417 e-value: 1.5E-13 score: 61.0 coord: 435..511 e-value: 6.5E-12 score: 55.6 coord: 78..153 e-value: 7.7E-14 score: 62.0 coord: 171..245 e-value: 2.1E-18 score: 77.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 79..146 e-value: 1.1E-13 score: 50.8 coord: 172..241 e-value: 4.6E-15 score: 55.2 coord: 343..411 e-value: 9.7E-14 score: 51.0 coord: 436..497 e-value: 1.0E-13 score: 50.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 77..157 score: 14.726371
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 170..249 score: 16.84124
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 434..497 score: 14.248819
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 341..421 score: 14.777537
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 156..284 e-value: 6.7E-21 score: 76.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 340..420 e-value: 2.5E-22 score: 80.8 coord: 76..155 e-value: 1.7E-22 score: 81.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 433..508 e-value: 3.2E-17 score: 64.5
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 151..266
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 43..157
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 340..498

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC05G100840.1	CmUC05G100840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding