CmUC05G099360 (gene) Watermelon (USVL531) v1

Overview
NameCmUC05G099360
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionMyb_DNA-bind_3 domain-containing protein
LocationCmU531Chr05: 28810847 .. 28815327 (-)
RNA-Seq ExpressionCmUC05G099360
SyntenyCmUC05G099360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAAGATATGACCAAAACAAAATTTCAAAACAAGAATTTCGAGTTAGGCCATGATTGCACACATGATGTCAGCAATCATGGACATGAGGTCAATGACCATGCACATGACGTTAGCGATCGCATACGTAGGGTCAACGATCGTGCACTTTTTCTGTGTGAACAATAACTTCCTTTTGGTCATATCTTCATCCATACAATTTCGTTTTGGCTAAATTACTACTTTTTTCATATTTTTTTCATATTTTTTTCGTATTCTTTCCGATGGTATTTATAAATTGAGAAACATGTGAAAGAATCTTTACGTTTAAATAGCTTCACAAAGTTTAAACTTAGATAATTTTTTGTATGTGATGTTTTAAATATATAAAGAAGAAACACAAACAGGAGAAACCCAAAATCTAAGCAAGAAGTGAATAGTGACTCATTTAAAATGATGGTAAAGTGAGTATTTCAAATCTTCAGTAGGTAAAAGAAAACATATTTTCAACAAAAAAAAAAAAAAATCAATTAGATAGAAGTTTTGGTTTTTGGTTAGTGGTTAGTTTGGGCAATTTTCCAAATATTTTTCCAAGAAATCGTGCTGTTGGCTAAACTGATTATTATTGTGAACTTGTTCGCACCTTTATTACCACAAAACAGGAAAAAAAGAGCCATACTTATACGCAGGTAACTTAGACTGCACCTAAGTCCATCCTATTTTCTCTACACATAAAAAAATAATTTTTTAGTAACTTAAAAAAATAAAAATAATCTAGCTTGTAGCAGCTTTTGATTGAATAAAAATAATCTAGCATGTAATAGCTTTTGATTTAGTCCAATAGTGGGATGTAGTGATGATAGTTGGTTTGGTTTTGTTGATTTTGGAGTCAACCAAGAACCAAACCAAACCAATCGATTTTATAAAAAAGATATCCTAATTGATGCCCAATAAAAAATAAAACCAATTAATTGATTTTATTTAGTTTGGTTTATTATCCATTTGATTCTCAATTTTTAACATTTTCCTTTTTTTTTTCCAAATTTTAATTTTAATTTTCAATTTTGTTTTGAATCAGTCATTTTTTACTAATTTTAAATTAAAATTAAGTCTATTTATTTTGTCTGACATTTCGTAAAAAAAAAAAATATACACACTAAATAATAATTGAATTTTTTGTAAGAATAAATGTATATACATTGTAATAATTAAAATATTAAAAGATATCGAATATAAGTACCTCGATTCGATTTAATTTTGATTTAATTTTTTTATCAAAATTAGATATATATATATTTTTTTCTTCAAATACAAACTAATATATTTAATTTTATATGAACAAACCAAATCAAATCAATGGATGAGTTTGTATTAAATTGATTTTTCGGTTTTTCCACTTTTTGTTATACTCGGGGTGCACCCAATCTTAAAACTTCCCGAAGAAAGAACAAATTAAGAAATTTATTTTATTTTATTAAAATTTCTGGTAGGACTGGAGAGCTTGGAAAGGAGCTTACCGCTCCCCGCCGTCGCGGTTCCCCTTTTCCGGTATGTTCCCATGCCAATTTCAGCGTTTAGTTATTCAAGTCAGTGATACAATGCTGAGGCTTATTTATCTCTGTAAACGATTGTATTATTTTCTGTGTTTTTTCTAATGTATTCGAAGAGAGTTGATTTTGTCTGCTGCCCAACGAATGTAAGCGATTAACAAGCAGTTTGAATTATGCTTGGAATTTTTCATCTTCATCGCGTTATGTTGTTCGTACTTCTATCTGGAACGTGTTCAGACTGAGGCCGTTTTGTTTATTCCATGACGACTATTCCGATTCAAATGTTTTGCGTTTCTTTTCTTCGCTTTTATTGAAGCATTCGTGATTCTAAATTCTACACCATTTTCACCCTTGTCAGCCTTAGTTCCATGGCGTCGCTTTGCGTTTGCGCTTCGTTTCTATAATCATTCGGCTTCTTGGAACCAGATAACGTTTTACAGCGGCAAAAGGAACTTAATCAGGCTAGAATTACTTTTAGAACAGTTAATTGTTAGTTACTTATTGTAATTTTTAGTTATTTCATTATATTGCGGAACTCTTGTACAAGCTCTATGAAAACTGAGCTCTCTGAGGGAATAGATTCATTCAATATCTTCTTCTCTCAATTTCTTGTAAAACAAGCAAATCCTCAATTGACCCGAGAATTTCAAAACCCCCACTAGACTATCCTCTCTTCTTCATCTCTTAATATTTTTCACTCCCATCGGCTACTCCTGAACAACCATCTCTGACTAACTTTGATTTTCTTGTTATTGGCGTTTCTTTGTTTCTGTTTTAAGATAACACTGAATAGATAGTGATCTTACTTGAACGTTATCTTCTTTCTAACTTCTTTTCCCTTATTTTCTGGGATGGAGCTCATTTTTAGTCTTCAGTTTTCCCTTGTCGTTTTATTAGTTATTGGCTGTTGTTTCTTATTGTTTCTTGGTCTTGTTTGAAGATTTAACTGTAAATCTGTATTGGTTGGAATTTGGATACTACTTTCTCATGCTTGTCATTAATACATTATTGTCCCCTGAATACTAGTTTCGGCATAGATTGCCTCTGATAAATCTGTGTTGCCTTCATTGTGGGTAAAGCTAAAATCATGGTATTTGATGTCAAAAGGCCTGCGAAAAGTAAAGGCAAGACACTATTTCACATTGCATAGGCCAAGTTTGTATCTGGTTAAGTTGTATAGGCTGTTTTGATAGTTTCTTATTTATAATCTCAGCAGGTTACAGTAATGCTGGAGAAAACGTTTACTCCACGTGATTTTACCAATATAATTATTTTAATTATTTTTTCCCTCAGCAAAGTATGTGTAATTCTACAGTCAGTTCTGTTTGGGCTTCTTTTCTTTGCTTATCCCAAAAATAAGGCTCATTAAATCTTGTTTCATCGATAGAACTTCTATTACAGCCCATTTCTCTGAATCAGTGTTATGGTCTGCATTATGCACAATGCGGAGATAGAAGCTATCTGTTCAGCATGTTAGTCTATCAATGATCTACATTAACTTCGTTTTCATTCAAATAAATGTTGTTCAGTCTCGAGCTCTAAGAAACTAGATCAAAGATTGCTCTGAAGTCTATAAATACTCTGGTGTTTGATTAATTTTGGTATCTTCAGCAGGTGCTACTCATATAAATTTCTGATCTTGTATGTGTTAGAAAAAGACAAGTTCCTCTGCTGATGGTAAGGATGGTCTTTTATCTTCAGCCTGTTGATTTATCAAAAAAAATGACCAGATAATTATCAGATCTATCTTCCATTATTCCATCAATGGACCTTTCCTGGTGTGCTGTTTAAATTCCACCGTTTTACATTAGTTGCTGCTGTTAAAATGAATGTTTGGCATGTGGATCCGAGTTTATTTTGAAAATCTTGTTTAAACTGTTGGTTTTGTACTTGACACTGTATTGGCTTCTTGCAGTTGGCATGATACTGTCTTCAAGATTGCGCCTTTTGCAGCAATAAATTTTGTCAAAAGAAATTTAATTCCAGGATAATTATTTTTCAGGAGAAAGTATGGGGGCATATTGATTTTCATGTACATTGCTTCTGATTCACGAAAAGCTAGATATGAATTATATGTTTTCTTAATCATATTGTAACCTTTTCACTCTATTAATTAATATTATGCTTTGGTGATATATTTTACATAAATTATTTGTAAAACTAAGTTGGTCGTCTCATGCCATTTTATTTTTTCCAAATATCTGCTTTATTCTGTTATATGGCTGCAGAAACATGAGGCTGATGTGGCTGCTACCCTCAATACATTAATTTCTCACATTTTTTATTGACGTTGGACCATTTGTTTCTTAGAACAATATCAATTCATGGTGCATGACTTTTATACAGCATACTCTTGTAATTTGATGTTACATATCAGAGAGATGATTAAACTAGGCATAATTCATGATGTTTTATCATATCTTTCAATGTTCAAGACTGCAACTTCATTTTCTTCATTGTATATGGATAGTGATGCCAATCTGCAACTTAAACAAGAATGTTCAAGGGCAAAGTGTACAACATCTCTGGACAAGATATTTGCAGATCTGGTTGTCAGGCACATTCAGCAGAGATAGACAAAACAAAGTGTTGGATAAGAAAACATGAAATCACATTTGCGATGAAATCAATAAGCAAACTGATCTCAACTTCCAATAACAATCAGTTGAGGAAGCATTTGGATGTCTTGAGAGTGACCTCACCATTGATGATTCATGTGCTATTGGGTTTGATCGGGGGGAAGAACTTGGGGTAGATTGCTTTCCTTTCGTAAGCTTACCAAGTTTTCCATTACAGGTCTACCTTAAGTTTCTGAAAGTCTTTCCATAGGCCCAGCATCGATCTGAGATAATCAAAGTCGAGGACTGTCCCATATATGAGCAGATGTACACAATATTCACAGAATCAGATGCTGCTGGGAAGTATGCACGATCCAGCCACTACAAATAG

mRNA sequence

ATGGATGAAGATATGACCAAAACAAAATTTCAAAACAAGAATTTCGAGTTAGGCCATGATTGCACACATGATGTCAGCAATCATGGACATGAGGTCAATGACCATGCACATGACGTTAGCGATCGCATACGTAGGGACTGGAGAGCTTGGAAAGGAGCTTACCGCTCCCCGCCGTCGCGGTTCCCCTTTTCCGTTGAGGAAGCATTTGGATGTCTTGAGAGTGACCTCACCATTGATGATTCATGTGCTATTGGGTTTGATCGGGGGGAAGAACTTGGGGCCCAGCATCGATCTGAGATAATCAAAGTCGAGGACTGTCCCATATATGAGCAGATGTACACAATATTCACAGAATCAGATGCTGCTGGGAAGTATGCACGATCCAGCCACTACAAATAG

Coding sequence (CDS)

ATGGATGAAGATATGACCAAAACAAAATTTCAAAACAAGAATTTCGAGTTAGGCCATGATTGCACACATGATGTCAGCAATCATGGACATGAGGTCAATGACCATGCACATGACGTTAGCGATCGCATACGTAGGGACTGGAGAGCTTGGAAAGGAGCTTACCGCTCCCCGCCGTCGCGGTTCCCCTTTTCCGTTGAGGAAGCATTTGGATGTCTTGAGAGTGACCTCACCATTGATGATTCATGTGCTATTGGGTTTGATCGGGGGGAAGAACTTGGGGCCCAGCATCGATCTGAGATAATCAAAGTCGAGGACTGTCCCATATATGAGCAGATGTACACAATATTCACAGAATCAGATGCTGCTGGGAAGTATGCACGATCCAGCCACTACAAATAG

Protein sequence

MDEDMTKTKFQNKNFELGHDCTHDVSNHGHEVNDHAHDVSDRIRRDWRAWKGAYRSPPSRFPFSVEEAFGCLESDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK
Homology
[Close]
BLAST of CmUC05G099360 vs. NCBI nr
Match: PON87492.1 (Myb/SANT-like domain containing protein [Trema orientale])

HSP 1 Score: 87.8 bits (216), Expect = 7.6e-14
Identity = 38/59 (64.41%), Postives = 49/59 (83.05%), Query Frame = 0 

Query: 74  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK 133
           +D T+D+SC +GFD  E++GAQ R E IKV+DCPIYEQ+ TIFT+S A GKYA+SSHY+
Sbjct: 91  NDFTLDESCCVGFDLWEDIGAQPRPETIKVKDCPIYEQLCTIFTDSSADGKYAQSSHYE 149

[Close]
BLAST of CmUC05G099360 vs. NCBI nr
Match: XP_027330350.1 (L10-interacting MYB domain-containing protein-like [Abrus precatorius] >XP_027330351.1 L10-interacting MYB domain-containing protein-like [Abrus precatorius])

HSP 1 Score: 87.0 bits (214), Expect = 1.3e-13
Identity = 39/59 (66.10%), Postives = 48/59 (81.36%), Query Frame = 0 

Query: 74  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK 133
           +D  IDDSC IGFD+ E+LGAQ R E +KV+DCPIYEQ+ TIF +S A GKYA+SSHY+
Sbjct: 91  NDFVIDDSCCIGFDQWEDLGAQPRHETVKVKDCPIYEQLCTIFIDSAADGKYAQSSHYE 149

[Close]
BLAST of CmUC05G099360 vs. NCBI nr
Match: EXB70651.1 (hypothetical protein L484_023837 [Morus notabilis])

HSP 1 Score: 86.3 bits (212), Expect = 2.2e-13
Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = 0 

Query: 74   SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHY 132
            +D T+D SC IGFD  E+LGAQ R E +KV+DCPIYEQ+ TIFT+S A GKYA+SSHY
Sbjct: 1182 NDFTLDASCCIGFDLWEDLGAQTRPESVKVKDCPIYEQLCTIFTDSSADGKYAQSSHY 1239

[Close]
BLAST of CmUC05G099360 vs. NCBI nr
Match: PON56685.1 (Myb/SANT-like domain containing protein [Parasponia andersonii])

HSP 1 Score: 86.3 bits (212), Expect = 2.2e-13
Identity = 37/59 (62.71%), Postives = 48/59 (81.36%), Query Frame = 0 

Query: 74  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK 133
           +D T+D+SC +GFD  E++GAQ R E IK +DCPIYEQ+ TIFT+S A GKYA+SSHY+
Sbjct: 91  NDFTLDESCCVGFDLWEDIGAQPRPETIKAKDCPIYEQLCTIFTDSSADGKYAQSSHYE 149

[Close]
BLAST of CmUC05G099360 vs. NCBI nr
Match: XP_024022243.1 (L10-interacting MYB domain-containing protein [Morus notabilis])

HSP 1 Score: 86.3 bits (212), Expect = 2.2e-13
Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = 0 

Query: 74  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHY 132
           +D T+D SC IGFD  E+LGAQ R E +KV+DCPIYEQ+ TIFT+S A GKYA+SSHY
Sbjct: 91  NDFTLDASCCIGFDLWEDLGAQTRPESVKVKDCPIYEQLCTIFTDSSADGKYAQSSHY 148

[Close]
BLAST of CmUC05G099360 vs. ExPASy TrEMBL
Match: A0A2P5EPQ3 (Myb/SANT-like domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_166700 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.7e-14
Identity = 38/59 (64.41%), Postives = 49/59 (83.05%), Query Frame = 0 

Query: 74  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK 133
           +D T+D+SC +GFD  E++GAQ R E IKV+DCPIYEQ+ TIFT+S A GKYA+SSHY+
Sbjct: 91  NDFTLDESCCVGFDLWEDIGAQPRPETIKVKDCPIYEQLCTIFTDSSADGKYAQSSHYE 149

[Close]
BLAST of CmUC05G099360 vs. ExPASy TrEMBL
Match: A0A2C9UYZ4 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G065800 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 8.2e-14
Identity = 37/61 (60.66%), Postives = 50/61 (81.97%), Query Frame = 0 

Query: 72  LESDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHY 131
           +++D  IDDSC IGFD  E++GAQ R E +KV+DCPIYEQ+ TIFT++ A GKYA+SSH+
Sbjct: 9   VQNDFAIDDSCCIGFDLWEDIGAQTRHETVKVKDCPIYEQLCTIFTDTSADGKYAQSSHF 68

Query: 132 K 133
           +
Sbjct: 69  E 69

[Close]
BLAST of CmUC05G099360 vs. ExPASy TrEMBL
Match: A0A2P5C6Q1 (Myb/SANT-like domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_179030 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.1e-13
Identity = 37/59 (62.71%), Postives = 48/59 (81.36%), Query Frame = 0 

Query: 74  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK 133
           +D T+D+SC +GFD  E++GAQ R E IK +DCPIYEQ+ TIFT+S A GKYA+SSHY+
Sbjct: 91  NDFTLDESCCVGFDLWEDIGAQPRPETIKAKDCPIYEQLCTIFTDSSADGKYAQSSHYE 149

[Close]
BLAST of CmUC05G099360 vs. ExPASy TrEMBL
Match: W9RFR5 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023837 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.1e-13
Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = 0 

Query: 74   SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHY 132
            +D T+D SC IGFD  E+LGAQ R E +KV+DCPIYEQ+ TIFT+S A GKYA+SSHY
Sbjct: 1182 NDFTLDASCCIGFDLWEDLGAQTRPESVKVKDCPIYEQLCTIFTDSSADGKYAQSSHY 1239

[Close]
BLAST of CmUC05G099360 vs. ExPASy TrEMBL
Match: A0A6P4AUQ2 (L10-interacting MYB domain-containing protein-like isoform X2 OS=Ziziphus jujuba OX=326968 GN=LOC107435848 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.4e-13
Identity = 39/59 (66.10%), Postives = 47/59 (79.66%), Query Frame = 0 

Query: 74  SDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQMYTIFTESDAAGKYARSSHYK 133
           +D TIDDSC IGFD  E++ AQ R E IKV+DCPIYEQ+ TIFT+S   GKYA+SSHY+
Sbjct: 91  NDFTIDDSCCIGFDLWEDMEAQPRPETIKVKDCPIYEQLCTIFTDSSVDGKYAQSSHYE 149

The following BLAST results are available for this feature:
BLAST of CmUC05G099360 vs. NCBI nr
Match NameE-valueIdentityDescription
PON87492.17.6e-1464.41Myb/SANT-like domain containing protein [Trema orientale][more]
XP_027330350.11.3e-1366.10L10-interacting MYB domain-containing protein-like [Abrus precatorius] >XP_02733... [more]
EXB70651.12.2e-1367.24hypothetical protein L484_023837 [Morus notabilis][more]
PON56685.12.2e-1362.71Myb/SANT-like domain containing protein [Parasponia andersonii][more]
XP_024022243.12.2e-1367.24L10-interacting MYB domain-containing protein [Morus notabilis][more]
BLAST of CmUC05G099360 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC05G099360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2P5EPQ33.7e-1464.41Myb/SANT-like domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x0... [more]
A0A2C9UYZ48.2e-1460.66Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G065800 PE=4 SV=... [more]
A0A2P5C6Q11.1e-1362.71Myb/SANT-like domain containing protein OS=Parasponia andersonii OX=3476 GN=PanW... [more]
W9RFR51.1e-1367.24Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023837 PE=3 SV=1[more]
A0A6P4AUQ21.4e-1366.10L10-interacting MYB domain-containing protein-like isoform X2 OS=Ziziphus jujuba... [more]
BLAST of CmUC05G099360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47584FAMILY NOT NAMEDcoord: 73..131
NoneNo IPR availablePANTHERPTHR47584:SF2L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN-LIKEcoord: 73..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC05G099360.1CmUC05G099360.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding