CmUC05G098430 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC05G098430
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	replication protein A 32 kDa subunit A-like
Location	CmU531Chr05: 28007060 .. 28012288 (-)
RNA-Seq Expression	CmUC05G098430
Synteny	CmUC05G098430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTCCAGTACCCAGTTTGATTCCGCCAGCGGATTTACGTCTTCTCAGTCCAATGAATCCTCTACAACGAAGGTAAGTCACTGCTTCAACTTCTAAATTTCTGCTGGATTGATAGAGAATTTTAAAATTAATGCATAGAATTAGCTCTCAATGGATCAATACTCCTTAAAGTTGTTGGATAGCAATCCAGTGAGAGCAAAACCGAAAGTGCAAACCTAAATCGTTTTTAGTTCGCTGGAACGATGATCGGAACGGTGTTAAAATAGAAGAAACGGGGATCAAATTCACTTGTTTTATACTGTTACTTTCGGCTGTAGACATACTTTTGTTTGTCGAATTTGTGATATTGGATAAATCATGAGAGGAAATCGTGAATAAAATGGCATTTGACGACTGTTCGTTACATTTTATTCCATTTTCCCTTTTTCATATCTTTTTAACTACTGCACGCAGAGTCGAGAATCGCCGGGCTTGGTTCCGGTAACCGTGAAACAGATTAGCGAAGCTTCACATTCTGGCGAAGAGAAGGCCAACTTTGTAATCAACGGCGTTGACATTACAAATGTATATTTCCTCGCCTTATCTCTCAATTTTATAAACTGCTATGTATTATTTAAAAATGATTACAAGAAAATGCTGTACAGAATCAAATTTATCTTAATTTTACCTGGCAATGTAGTAATGGTTTTTTTTTTGGGCGGTTTAGTCGCTGTTAGATTCTTTTACCCATTAACCTATAGAAGCATGAACATTATGTAAGCAGAGTGTCGGATATTGCAATGCCTAGGGGAGGTTGTGTATTTCAGTCTTTACATCATATAAATGTTAATTGTAACAAACAATCGTCAAATGTTAGAAATTTTCTTGAGTAATTGTTAATGTATAAGCAACATGTAACTTTTCCCTTCATGACAAGTATCGAAACAGTCTGTTGATGAACATATTCCTGATTGGCTCCTCCAGATTTGATCATTGGCGTGTATTACTTGTAGACTTATAGTTTTTAAGCTTCTACTAATCCTTTGCCTTTTCATCTGATTTGCCATGCACATAGACTCTCATTCATTTTTTAGTGTGAGGATTTCTCATGCTGTACTTGTAAATTCTCTTTGTTGTAAGTACTGACATTTTAGTTATTGGAAAAGGTTACAGTCGTTGGGAAGGTATCAGAGAAAGCTGAAAGGAATACGGACATCACATTCACTATAGATGATGGAACAGGAACAATTGGTTGCAAAAGATGGTATACTGTTGCAGTTGCAATCTTTCTAAACCTTTTAACTAGATCTTCATTCTAGTCGTGTATCTGCTCCATTTTGCTGAAGAATGTATGTCAAAATTTATTCAGGGTAAACGACACTTTTGACACCAAGCAAATGGAGGAAATACAGTAAGTTCTCGTCTAGTTTGAATCTCTTGTGATGGCAAATACTTCAGTGGTCTTGATGACTCTTGTTTTGATTTTTTATGGCATAGAGATGGAATGTATGTACGGGTGAATGGGCATTTGAAAATATTTCAAAGTAACAAGCAAATTTTTGCATTCTCCGTAAGGTATGATATTTTGATTCTCTTCAATCTATTTACATGCGCTTGGGTTCTCTTTTGAAGTGAAAAGTTTTACATATAAGGTTATCATCCTGCTTGGTGTTTTTATTGCATGCTGAAACTTTAGGATTTGCACATCAAATGAGTTGATGTAGGTCAATGTTAGCTAAGCACCGTTTTGGAAAGATGCCATGTATGTTCTGATTCATTGTCATAGTAAATACCAAATATACAACTTTGCTCGAATAGGGTTGAATGGAATCTGTTTTATTTGTCGACTCTTCAGTTCTAAAATCAATAGCAGCAAATGTAGTATACTGGATTTGTAGGTAGAACAACCAGGATCCTTTCTACAGTGTCCTTGAGTTCTGTTTGATTGTTATGGAGAGAGGAACTTGCTATCTGTACAACGGAACTAAGATCCAATAGAAGAATTGGGTGGTGTCGGTGCCAATGGACCAGTTTTATTCACATTTTAGAAACAAGCGAAGGCGACCATTTTATTCATTTCTGATCATAGTGCTCGTAATTTTCAAACTCCACATGCCAGGATGACAAGACCTGGTTTCGAAGTGTTTACATTAAATAATGTTTACATTGTTTGAACTTTGAAGGTCTCAGGGATGTGCCAGTTGCATAGAGATATTAGGTGCTCTGGAAATTTCTCGATGGATTTAAGAAATTTTCAGAAATGGTATTAGATTCTCACGTTGCCAGTGCATGGGCACAATGGGATGTGGCATTTATTAGTTTTGAGACAGTAGTGGTCTTAGATCAATTCTGTATTAATCCTCAATTTAAAATCAGTTACTAGTGGATAATTAGTCAAACAATTCCCGGAGTACAAAACTCTGAATGATGAAATTTACATATGGGATTTTGCAAATTTTCCCCGGTGTTGATTTAAGAAATGTTCTTTCCCCCTTAAAAATTTGCCATGATTGATTTCCTTCGATTCTTTGGGGAATGTAAAGGAACAAGAGACATGCCTAAACCATCATGGGTTGGCCTAGTGGTAAAAAAGGAGATATAGTCTTAATAAATGACCAAGAGGTCAAGGGTTCAATCCATGGTGGCCACCTACCTAGGAATTAATTTCCTATGAGTTTCCTTGACACCCAAATGTTGTAGGGTCAGGCGGGTCGTCCCGTGAGATTAGTCGAGGTGCGCGTAAGCTGGCCCCGACACTCACGGATATCAGGAAAACCTTTGGACTTTAAATTAATATATTGTTAATGCTATATATTTCTCTTTGTTAAAATCTGTGATTGCCTAAAATTTCTGCTTGAAACTACTGTCCAATGGATTGATCTTTTTTCTAAGCTTGGTCACCAGGCAGTGACCAATATCAAGTAATTGTTTGGGTATTGGAAACCGTCTAATGCCAAATTATCTGTGCCTGTTGTATATTTGATCGACTGACAGGATGATGAATTTGGTTATGTTTTGCCAGGCCTGTAACAAATTTTGATGAAATTACCTTCCACTTTATTGAATGCATACACGACCACTTGCGGAATTCCAAGTTACAGGTACTGGTTCCTGGAGCCGACTTCATAGTTGTGCTTCTAACTTGTAATTTTGTTTTTCTTTAATAATGGGATTAACTATTAATGAATATCATAATTCTCAATTCATTTGTGCTAAAAATGCTAGAATCTCAATGGCGAAGGATCAACACAGTTCCAATCCTCAGATTCAACTCTGAAGACTCCAGTGCAGAATGGCTCGAGTGGATATATGACAGCATCTTCTGGAATAGTGAGTCTTAACCATGATTATTATTGAAAATGTGACAAAAGCCTCACATTGGCTATAAATAGAAGATCATAGGTATAAGTGAGGGATAATATCTCAATTGGTAATATCTTTTGGGTAAAACTGAAAGCAAAGTCATATAAGCATATATTTAAAGCGAACAATATCAGACTATTGTGAAGATATGTGAAGGGTTGTTGTCCCTAATAATTATGTGAGTACATCAATATCTTATGAAAGATTCTTTGATTGGAATTTAAATCTAATTTCTTTTTGCAGCCATCTGAGCAGCACACTGTTGATGTTAAAAAGAACTGTGATGAATTGGTTCTCGACTATCTGCAGCTGCCCTCCAGCGTGTAAGTTGTCCCAGACCAATTTTTAATTTTCCTTTTCAGATTGTTTTATTTGTTGGCTGGTTACTGTGCATTATCTTATATGAGATAGACTTAAGCTTGCCTTTGGTCTGGAAACGAGGTGGTTTTACATTTAAATAATTGAATTCCATCATCAGATGTGACTGAGTCATTCGTGGTACTTGTTAACTTCTGTGAATAGAAAACAAGACGTTAGGTCGGTGGTTGACTTTTAGTCAGGTCACTTCTTATTATTGGCTCTATAGACACCCACAGTGAGTTGGCCTTGGCCCAATAATAAGGGGACAAGGTATGACTTTAGGTTGCACGGTTCAATTTTCATGTGGACCACTCACATTGGAATCTTGCAAAAAAGAATATTTTCAACTAATTGTTGTAGATTAGTTGTGACCTTGAGATTTGTTGTTGCATAGGGTGTTTGGACGCCGAGTTAGTTAATTATAGTTAGTGATTATAATAGTATGTAGGTTATAATAAGATGTATTTGGGGTGCGAATTAATTTCGTCTAAGTTATAATAATTTGTGCTTGGGGTGTAGACTATTTTAGTTTGAATAGGAAATAGTAAACACCATAGCAAATAGGAAAAGAGATGATGGGTAAGAAATAATAAACACTATATCAATTAAGATAATTTTTAAGATTTAACTATCATTATATTCCATAATTATTTTTCATTTGAAGTTAGTTTTTATCAAACTTTGTTAATTAAACAGAGTAAAAGCTAATAGAGACTAAACAATTGAGATTATTTAAGATTTATTGAATGTATAATGATTAAATTTGGATATTTAAAGTAGTGGGTTTCAAAGTATACAGGGGTGTTAACTATATCGGTATTTATGTATGAATATTTTGGTTGATCTTTAGTGGAGTTATTTTATTGATTTGCCAATTAAAAATAATTTAGAATAATGATCAAGGGTGAAATTAAAAAGAACCATAAACTTTAATATCTGAAGTTTTTGTTGGTAGATGTTAAAATTTTAAGAACCATCTTAACAACTAAATAAGGTAATTACAATAGATAACATTTTTAGGCTTAATAATGAAGTGTATAGCAACATTTTAAAAAAAAATTGCAAACATAGCAAAGTTTATTGGTGATAGACTCTATCATTAATAGACTTCTATTAGCAATAAATCTAAATTTTGTTATATCTGCAAATTCTTTTGCATTGTACTATATTTGCTAATACTTTGGGTTTCATTGTTCTATTTGCAATTCACCCAACTATATAATGTTAGGTATAAAATTATTCTAAAAGATTAGATGTGTACAAGATACTTATTCTGATTTTTTTTCCCAGTGCAAAAGAAAGAGGGATACACAGAGATGAACTTTCCCAACAACTGAAAATTCCAATGGAGAAAATATTGTATGCCTCCTCTCCCTCCCCATCTCTATTATGTGGTTAATATGGCAATAACTTTTACTGCTTTATTTGTTAATTTTTCTTTTCAGGAACTCCATAAGGTCTCTTGAAGATGAAGGTTTGATATATTCCACCATAGATGAGTTTCACTTCAAGTCTGCCGCATAG

mRNA sequence

ATGTTCTCCAGTACCCAGTTTGATTCCGCCAGCGGATTTACGTCTTCTCAGTCCAATGAATCCTCTACAACGAAGAGTCGAGAATCGCCGGGCTTGGTTCCGGTAACCGTGAAACAGATTAGCGAAGCTTCACATTCTGGCGAAGAGAAGGCCAACTTTGTAATCAACGGCGTTGACATTACAAATGTTACAGTCGTTGGGAAGGTATCAGAGAAAGCTGAAAGGAATACGGACATCACATTCACTATAGATGATGGAACAGGAACAATTGGTTGCAAAAGATGGGTAAACGACACTTTTGACACCAAGCAAATGGAGGAAATACAAGATGGAATGTATGTACGGGTGAATGGGCATTTGAAAATATTTCAAAGTAACAAGCAAATTTTTGCATTCTCCGTAAGGCCTGTAACAAATTTTGATGAAATTACCTTCCACTTTATTGAATGCATACACGACCACTTGCGGAATTCCAAGTTACAGAATCTCAATGGCGAAGGATCAACACAGTTCCAATCCTCAGATTCAACTCTGAAGACTCCAGTGCAGAATGGCTCGAGTGGATATATGACAGCATCTTCTGGAATACCATCTGAGCAGCACACTGTTGATGTTAAAAAGAACTGTGATGAATTGGTTCTCGACTATCTGCAGCTGCCCTCCAGCGTTGCAAAAGAAAGAGGGATACACAGAGATGAACTTTCCCAACAACTGAAAATTCCAATGGAGAAAATATTGAACTCCATAAGGTCTCTTGAAGATGAAGGTTTGATATATTCCACCATAGATGAGTTTCACTTCAAGTCTGCCGCATAG

Coding sequence (CDS)

ATGTTCTCCAGTACCCAGTTTGATTCCGCCAGCGGATTTACGTCTTCTCAGTCCAATGAATCCTCTACAACGAAGAGTCGAGAATCGCCGGGCTTGGTTCCGGTAACCGTGAAACAGATTAGCGAAGCTTCACATTCTGGCGAAGAGAAGGCCAACTTTGTAATCAACGGCGTTGACATTACAAATGTTACAGTCGTTGGGAAGGTATCAGAGAAAGCTGAAAGGAATACGGACATCACATTCACTATAGATGATGGAACAGGAACAATTGGTTGCAAAAGATGGGTAAACGACACTTTTGACACCAAGCAAATGGAGGAAATACAAGATGGAATGTATGTACGGGTGAATGGGCATTTGAAAATATTTCAAAGTAACAAGCAAATTTTTGCATTCTCCGTAAGGCCTGTAACAAATTTTGATGAAATTACCTTCCACTTTATTGAATGCATACACGACCACTTGCGGAATTCCAAGTTACAGAATCTCAATGGCGAAGGATCAACACAGTTCCAATCCTCAGATTCAACTCTGAAGACTCCAGTGCAGAATGGCTCGAGTGGATATATGACAGCATCTTCTGGAATACCATCTGAGCAGCACACTGTTGATGTTAAAAAGAACTGTGATGAATTGGTTCTCGACTATCTGCAGCTGCCCTCCAGCGTTGCAAAAGAAAGAGGGATACACAGAGATGAACTTTCCCAACAACTGAAAATTCCAATGGAGAAAATATTGAACTCCATAAGGTCTCTTGAAGATGAAGGTTTGATATATTCCACCATAGATGAGTTTCACTTCAAGTCTGCCGCATAG

Protein sequence

MFSSTQFDSASGFTSSQSNESSTTKSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKTPVQNGSSGYMTASSGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

Homology

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BLAST of CmUC05G098430 vs. NCBI nr
Match: XP_038897330.1 (replication protein A 32 kDa subunit A-like [Benincasa hispida])

HSP 1 Score: 506.5 bits (1303), Expect = 1.4e-139
Identity = 256/271 (94.46%), Postives = 265/271 (97.79%), Query Frame = 0


Query: 1   MFSSTQFDSASGFTSSQSNESSTTKSRESPGLVPVTVKQISEASHSGEEKANFVINGVDI 60
           MFS TQFDSASGFTSSQ+N+SS+ KSRESPGLVPVTVKQISEASHSGEEKANFV+NGVDI
Sbjct: 1   MFSGTQFDSASGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVLNGVDI 60

Query: 61  TNVTVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120
           TNV +VGKVSEKAERNTDITFT+DDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL
Sbjct: 61  TNVNIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120

Query: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT 180
           KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNG+G TQFQSSDS +KT
Sbjct: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGPTQFQSSDSIVKT 180

Query: 181 PVQNGSSGYMTASSGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240
           PVQNGSSG+ TASSGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKI
Sbjct: 181 PVQNGSSGHQTASSGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240

Query: 241 PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 272
           PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
Sbjct: 241 PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 271

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BLAST of CmUC05G098430 vs. NCBI nr
Match: XP_008466326.1 (PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis melo])

HSP 1 Score: 494.2 bits (1271), Expect = 7.2e-136
Identity = 250/271 (92.25%), Postives = 262/271 (96.68%), Query Frame = 0


Query: 1   MFSSTQFDSASGFTSSQSNESSTTKSRESPGLVPVTVKQISEASHSGEEKANFVINGVDI 60
           MFSSTQFDS SGFTSSQ+N+SS+ KSRESPGLVPVTVKQISEASHSGEEKANFVIN VDI
Sbjct: 1   MFSSTQFDSGSGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDI 60

Query: 61  TNVTVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120
           TNVT+VGKVSEKAERNTDITFT+DDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120

Query: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT 180
           K+FQSNKQIFAFSVRPVTNFDEITFHF+ECIHDHLRNSKLQNL G+GSTQ Q+SDS +KT
Sbjct: 121 KMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKT 180

Query: 181 PVQNGSSGYMTASSGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240
           PVQNGSSGY T SS IPSEQHTVDVKK+CDELVLDYLQLPSSVAKERGIHRDELSQQLKI
Sbjct: 181 PVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240

Query: 241 PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 272
           PMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Sbjct: 241 PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 271

[Close]

BLAST of CmUC05G098430 vs. NCBI nr
Match: XP_004136317.1 (replication protein A 32 kDa subunit A [Cucumis sativus] >KGN60158.1 hypothetical protein Csa_001153 [Cucumis sativus])

HSP 1 Score: 493.0 bits (1268), Expect = 1.6e-135
Identity = 248/271 (91.51%), Postives = 262/271 (96.68%), Query Frame = 0


Query: 1   MFSSTQFDSASGFTSSQSNESSTTKSRESPGLVPVTVKQISEASHSGEEKANFVINGVDI 60
           MFSSTQFDSASGFTSSQ+N+SS+ KSRESPGL+PVTVKQISEASHSGEEKANFVINGVDI
Sbjct: 1   MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDI 60

Query: 61  TNVTVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120
           TNVT+VGKVSEKAERNTDITFT+DDGTGTIGCKRWVNDTFDT QMEEIQDGMYVRVNGHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTNQMEEIQDGMYVRVNGHL 120

Query: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT 180
           K+FQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNL G GSTQ Q+SDS +KT
Sbjct: 121 KMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLKGNGSTQLQTSDSIVKT 180

Query: 181 PVQNGSSGYMTASSGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240
           PVQNGS+GY T SS IPSEQHTVDVKK+CDELVLDYLQLPSSVAKERGIH+DELSQQLK+
Sbjct: 181 PVQNGSNGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKL 240

Query: 241 PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 272
           PMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Sbjct: 241 PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 271

[Close]

BLAST of CmUC05G098430 vs. NCBI nr
Match: XP_022936562.1 (replication protein A 32 kDa subunit A-like [Cucurbita moschata])

HSP 1 Score: 491.1 bits (1263), Expect = 6.1e-135
Identity = 245/271 (90.41%), Postives = 262/271 (96.68%), Query Frame = 0


Query: 1   MFSSTQFDSASGFTSSQSNESSTTKSRESPGLVPVTVKQISEASHSGEEKANFVINGVDI 60
           MFSS+QFDS SGFTSSQ+N+SS+ K+RE+PGLVP TVKQISEASHSGEEKANFVINGVDI
Sbjct: 1   MFSSSQFDSGSGFTSSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFVINGVDI 60

Query: 61  TNVTVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120
           TNVT+VGKVSEKAERNTDITF +DDGTG IGCKRWVNDTFDTKQM+EIQDGMY+RVNGHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVNGHL 120

Query: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT 180
           KIFQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQNLNG GSTQFQSSDS +KT
Sbjct: 121 KIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKT 180

Query: 181 PVQNGSSGYMTASSGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240
           P+QNGSSGY TASS +PSEQHTVDVKKNCD+L+LDYLQLPSSVAKERGIHRDELSQQLKI
Sbjct: 181 PMQNGSSGYQTASSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKI 240

Query: 241 PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 272
           PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
Sbjct: 241 PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 271

[Close]

BLAST of CmUC05G098430 vs. NCBI nr
Match: KAG7024504.1 (Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 486.5 bits (1251), Expect = 1.5e-133
Identity = 243/271 (89.67%), Postives = 260/271 (95.94%), Query Frame = 0


Query: 1   MFSSTQFDSASGFTSSQSNESSTTKSRESPGLVPVTVKQISEASHSGEEKANFVINGVDI 60
           MFSS+QFDS SGFTSSQ+ +SS+ K+RE+PGLVP TVKQISEASHSGEEKANF INGVDI
Sbjct: 1   MFSSSQFDSGSGFTSSQTYDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDI 60

Query: 61  TNVTVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120
           TNVT+VGKVSEKAERNTDITF +DDGTG IGCKRWVNDTFDTKQM+EIQDGMY+RVNGHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVNGHL 120

Query: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT 180
           KIFQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQNLNG GSTQFQSSDS +KT
Sbjct: 121 KIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKT 180

Query: 181 PVQNGSSGYMTASSGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240
           P+QNGSSGY TASS +PSEQHTVDVKKNCD+L+LDYLQLPSSVAKERGIHRDELSQQLKI
Sbjct: 181 PMQNGSSGYQTASSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKI 240

Query: 241 PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 272
           PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
Sbjct: 241 PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 271

[Close]

BLAST of CmUC05G098430 vs. ExPASy Swiss-Prot
Match: Q9ZQ19 (Replication protein A 32 kDa subunit A OS=Arabidopsis thaliana OX=3702 GN=RPA2A PE=1 SV=2)

HSP 1 Score: 249.6 bits (636), Expect = 4.0e-65
Identity = 135/281 (48.04%), Postives = 193/281 (68.68%), Query Frame = 0


Query: 1   MFSSTQFD-----SASGFTSSQSNE-----SSTTKSRESPGLVPVTVKQISEASHSGEEK 60
           MFSS+QF+     S  GF SSQ ++     SST K+R+  GLVPVTVKQI+E   S  EK
Sbjct: 1   MFSSSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEK 60

Query: 61  ANFVINGVDITNVTVVGKVSEKAE-RNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQ 120
           +  VING+ +TNV++VG V +K E + T++ FT+DDGTG I CKRWV++TFD ++ME ++
Sbjct: 61  SGLVINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVR 120

Query: 121 DGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGST 180
           DG YVR++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q       T
Sbjct: 121 DGTYVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQRQQVGDVT 180

Query: 181 QFQSSDSTLKTPVQNGSSGYMTA--SSGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKER 240
           Q      ++ T  Q GS+       +  + S+ +  + +KN D+++LDYL+ P+  A+++
Sbjct: 181 Q------SVNTTFQGGSNTNQATLLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQ 240

Query: 241 GIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFK 269
           GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Sbjct: 241 GIHIDEIAQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFK 275

[Close]

BLAST of CmUC05G098430 vs. ExPASy Swiss-Prot
Match: Q6K9U2 (Replication protein A 32 kDa subunit A OS=Oryza sativa subsp. japonica OX=39947 GN=RPA2A PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.2e-47
Identity = 119/282 (42.20%), Postives = 172/282 (60.99%), Query Frame = 0


Query: 2   FSSTQFDSASGFTSSQSNESSTT---KSRESPGLVPVTVKQISEASHS---GEEKANFVI 61
           FS     S S FTSSQ+  + +T   KSR +   +P+TVKQISEA  S   GE+ A FV+
Sbjct: 4   FSQPDAFSPSQFTSSQNAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPFVV 63

Query: 62  NGVDITNVTVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVR 121
           +GV+  NV +VG VS K ERNTD++FTIDDGTG +   RWVND  D+ +   +Q+GMYV 
Sbjct: 64  DGVETANVRLVGLVSGKTERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGMYVS 123

Query: 122 VNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ------NLNGEGST 181
           V G LK  Q  K+  AF++RPVT+++E+T HFI+C+  HL N+K Q        +  GS+
Sbjct: 124 VIGSLKGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGSPAKTYSAMGSS 183

Query: 182 QFQS-SDSTLKTPVQNGSSGYMTASSGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKERG 241
                S+ T  T V++  +  ++ ++G  ++ +T          VL+  + P++V  E G
Sbjct: 184 SSNGFSEMTTPTSVKSNPAPVLSVTNGSKTDLNTE---------VLNVFREPANVESEHG 243

Query: 242 IHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSA 271
           +H DE+ ++ ++P  KI  +I  L D G IYSTIDE H+KSA
Sbjct: 244 VHIDEIVKRFRLPEAKIKVAIDYLADIGHIYSTIDESHYKSA 276

[Close]

BLAST of CmUC05G098430 vs. ExPASy Swiss-Prot
Match: Q8LFJ8 (Replication protein A 32 kDa subunit B OS=Arabidopsis thaliana OX=3702 GN=RPA2B PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 5.5e-46
Identity = 106/271 (39.11%), Postives = 167/271 (61.62%), Query Frame = 0


Query: 9   SASGFTSSQS-----NESSTTKSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNV 68
           +  GF  SQ+       SS+ K+R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V
Sbjct: 13  AGGGFMPSQATTQAHESSSSLKNRDVRTLLPLTLKQLSSASTTGE--SNFSIDGVDIKTV 72

Query: 69  TVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIF 128
            +VG++S    R T + F +DDGTG + C RW +   +T++ME ++ GMYVR++GHLKIF
Sbjct: 73  VIVGRISRMENRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKLGMYVRLHGHLKIF 132

Query: 129 QSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQN---LNGEGSTQFQSSDSTLKT 188
           Q  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+         + + Q   ST+ T
Sbjct: 133 QGKRSVNVFSVRPVTDFNEIVHHFTECMYVHMYNTKLRGGSITQDTATPRPQMPYSTMPT 192

Query: 189 PVQNGSSGYMTASSGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 248
           P +   +G    S+  P++ +  D      + VL+YL  P  +  E G+H D ++++L+I
Sbjct: 193 PAKPYQTG---PSNQFPNQFN--DSMHGVKQTVLNYLNQPMHIVSEAGVHCDIIARELRI 252

Query: 249 PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 272
           P+ ++  ++  L ++G IYST+DE  FKS A
Sbjct: 253 PLLQVKEALEQLSNDGCIYSTLDETCFKSTA 276

[Close]

BLAST of CmUC05G098430 vs. ExPASy Swiss-Prot
Match: Q6H7J5 (Replication protein A 32 kDa subunit B OS=Oryza sativa subsp. japonica OX=39947 GN=RPA2B PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.3e-43
Identity = 91/245 (37.14%), Postives = 151/245 (61.63%), Query Frame = 0


Query: 25  KSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAERNTDITFTID 84
           KSR +  L+P+TVKQI +AS + ++K+NF +NG++++ V +VG++  K +R TD++FT+D
Sbjct: 51  KSRNAQALLPLTVKQIMDASQTNDDKSNFAVNGMEVSTVRLVGRMLNKLDRVTDVSFTLD 110

Query: 85  DGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEIT 144
           DGTG +   RW ND+ DTK+M +IQ+G YV VNG LK FQ  +Q+ A+SVR +TNF+++T
Sbjct: 111 DGTGRVPVNRWENDSTDTKEMADIQNGDYVIVNGGLKGFQGKRQVVAYSVRRITNFNDVT 170

Query: 145 FHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKTPVQNGSSGYMTASSGIPSEQHTVD 204
            HF+ C+H HL  ++ ++     +T   + + T+       +   +T  +   S      
Sbjct: 171 HHFLHCVHVHLELTRPKS-QVNANTATGTPNQTMPRDSMAYNQSPLTNQASTFSAPQNTG 230

Query: 205 VKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDE 264
              N  +LVL+    P+ +  + G+  D +S++L +P E +   I    D G +Y+TID+
Sbjct: 231 TGTNMIDLVLNVFHDPAVMNDDHGVGVDYVSRRLNLPEETVGKIIIDQVDLGHLYATIDD 290

Query: 265 FHFKS 270
            H+KS
Sbjct: 291 HHYKS 294

[Close]

BLAST of CmUC05G098430 vs. ExPASy Swiss-Prot
Match: Q5Z8L1 (Replication protein A 32 kDa subunit C OS=Oryza sativa subsp. japonica OX=39947 GN=RPA2C PE=1 SV=2)

HSP 1 Score: 114.0 bits (284), Expect = 2.7e-24
Identity = 66/160 (41.25%), Postives = 94/160 (58.75%), Query Frame = 0


Query: 9   SASGFTSSQSNESSTTKSRESPGLVPVTVKQISEA-----SHSGEEKANFVINGVDITNV 68
           SA+G  ++ +   S  +     G VP TV  IS +     +  G     F I+GV+ TNV
Sbjct: 27  SAAGTGAAAAPSPSKPRDPRFSGCVPATVLHISRSFAAALAADGGGDPVFSIDGVETTNV 86

Query: 69  TVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIF 128
            V+G+V     R+TD+ FT+DD TG I   RW+ D  DT+    IQ+G+YV+V  +L  F
Sbjct: 87  RVLGRVVSVVSRDTDVCFTLDDSTGKIPLVRWITDQSDTRDTSYIQEGVYVKVQVNLMGF 146

Query: 129 QSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRN--SKLQ 162
           Q+ KQ  A S+RP+ NF+E+  HFIEC+H HL +  SK+Q
Sbjct: 147 QAKKQGLARSIRPINNFNEVVLHFIECMHVHLESVQSKMQ 186

[Close]

BLAST of CmUC05G098430 vs. ExPASy TrEMBL
Match: A0A1S3CR64 (replication protein A 32 kDa subunit A-like OS=Cucumis melo OX=3656 GN=LOC103503766 PE=3 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 3.5e-136
Identity = 250/271 (92.25%), Postives = 262/271 (96.68%), Query Frame = 0


Query: 1   MFSSTQFDSASGFTSSQSNESSTTKSRESPGLVPVTVKQISEASHSGEEKANFVINGVDI 60
           MFSSTQFDS SGFTSSQ+N+SS+ KSRESPGLVPVTVKQISEASHSGEEKANFVIN VDI
Sbjct: 1   MFSSTQFDSGSGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDI 60

Query: 61  TNVTVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120
           TNVT+VGKVSEKAERNTDITFT+DDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120

Query: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT 180
           K+FQSNKQIFAFSVRPVTNFDEITFHF+ECIHDHLRNSKLQNL G+GSTQ Q+SDS +KT
Sbjct: 121 KMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKT 180

Query: 181 PVQNGSSGYMTASSGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240
           PVQNGSSGY T SS IPSEQHTVDVKK+CDELVLDYLQLPSSVAKERGIHRDELSQQLKI
Sbjct: 181 PVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240

Query: 241 PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 272
           PMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Sbjct: 241 PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 271

[Close]

BLAST of CmUC05G098430 vs. ExPASy TrEMBL
Match: A0A0A0LEG7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881710 PE=3 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 7.8e-136
Identity = 248/271 (91.51%), Postives = 262/271 (96.68%), Query Frame = 0


Query: 1   MFSSTQFDSASGFTSSQSNESSTTKSRESPGLVPVTVKQISEASHSGEEKANFVINGVDI 60
           MFSSTQFDSASGFTSSQ+N+SS+ KSRESPGL+PVTVKQISEASHSGEEKANFVINGVDI
Sbjct: 1   MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDI 60

Query: 61  TNVTVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120
           TNVT+VGKVSEKAERNTDITFT+DDGTGTIGCKRWVNDTFDT QMEEIQDGMYVRVNGHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTNQMEEIQDGMYVRVNGHL 120

Query: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT 180
           K+FQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNL G GSTQ Q+SDS +KT
Sbjct: 121 KMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLKGNGSTQLQTSDSIVKT 180

Query: 181 PVQNGSSGYMTASSGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240
           PVQNGS+GY T SS IPSEQHTVDVKK+CDELVLDYLQLPSSVAKERGIH+DELSQQLK+
Sbjct: 181 PVQNGSNGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKL 240

Query: 241 PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 272
           PMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Sbjct: 241 PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 271

[Close]

BLAST of CmUC05G098430 vs. ExPASy TrEMBL
Match: A0A6J1F8S8 (replication protein A 32 kDa subunit A-like OS=Cucurbita moschata OX=3662 GN=LOC111443128 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 2.9e-135
Identity = 245/271 (90.41%), Postives = 262/271 (96.68%), Query Frame = 0


Query: 1   MFSSTQFDSASGFTSSQSNESSTTKSRESPGLVPVTVKQISEASHSGEEKANFVINGVDI 60
           MFSS+QFDS SGFTSSQ+N+SS+ K+RE+PGLVP TVKQISEASHSGEEKANFVINGVDI
Sbjct: 1   MFSSSQFDSGSGFTSSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFVINGVDI 60

Query: 61  TNVTVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120
           TNVT+VGKVSEKAERNTDITF +DDGTG IGCKRWVNDTFDTKQM+EIQDGMY+RVNGHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVNGHL 120

Query: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT 180
           KIFQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQNLNG GSTQFQSSDS +KT
Sbjct: 121 KIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKT 180

Query: 181 PVQNGSSGYMTASSGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240
           P+QNGSSGY TASS +PSEQHTVDVKKNCD+L+LDYLQLPSSVAKERGIHRDELSQQLKI
Sbjct: 181 PMQNGSSGYQTASSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKI 240

Query: 241 PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 272
           PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
Sbjct: 241 PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 271

[Close]

BLAST of CmUC05G098430 vs. ExPASy TrEMBL
Match: A0A6J1IMU1 (replication protein A 32 kDa subunit A-like OS=Cucurbita maxima OX=3661 GN=LOC111476648 PE=3 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.4e-132
Identity = 243/273 (89.01%), Postives = 260/273 (95.24%), Query Frame = 0


Query: 1   MFSSTQFDSASGFTSSQSNESSTTKSRESPGLVPVTVKQISEASHSGEEKANFVINGVDI 60
           MFSS+QFDS SGFT SQ+N+SS+ K+RE+PGLVP TVKQISEASHSGEEKANF INGVDI
Sbjct: 1   MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDI 60

Query: 61  TNVTVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120
           TNVT+VGKVSEKAERNTDITF +DDGTG IGCKRWVNDTFDTKQM+EIQDGMY+RVNGHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVNGHL 120

Query: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT 180
           KIFQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQNLNG GSTQFQSSDS +KT
Sbjct: 121 KIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKT 180

Query: 181 PVQNGSSGYMTAS--SGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQL 240
           P+QNGSSGY TAS  S +PSEQHTVDVKKNCD+L+LDYLQLPSSVAKERGIHRDELSQQL
Sbjct: 181 PMQNGSSGYQTASSVSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQL 240

Query: 241 KIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 272
           KIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
Sbjct: 241 KIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 273

[Close]

BLAST of CmUC05G098430 vs. ExPASy TrEMBL
Match: A0A6J1CUB8 (replication protein A 32 kDa subunit A OS=Momordica charantia OX=3673 GN=LOC111014622 PE=3 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 4.9e-122
Identity = 232/271 (85.61%), Postives = 249/271 (91.88%), Query Frame = 0


Query: 1   MFSSTQFDSASGFTSSQSNESSTTKSRESPGLVPVTVKQISEASHSGEEKANFVINGVDI 60
           MFSS+QFDS SGFTSSQ  +S++ KSRESPGLVPVTVKQISEA HSGEEKANFVINGVDI
Sbjct: 1   MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDI 60

Query: 61  TNVTVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120
           TNVT+VGKVSEKAERNTDITF +DDGTG IGCKRWVNDTFDTKQM++IQDGMY+RVNGHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTFDTKQMDDIQDGMYIRVNGHL 120

Query: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGSTQFQSSDSTLKT 180
           KIFQ N QIFAFSVRPVTN DEITFHFIECIHD+LRNSKLQ LNG  STQ QSSDST+  
Sbjct: 121 KIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQ-LNGVASTQSQSSDSTVNA 180

Query: 181 PVQNGSSGYMTASSGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 240
            VQ+GSSGY TASS + S QHTVDVKKN D+LVLDYLQLPSSVAKE+GIHRDELSQQLKI
Sbjct: 181 LVQSGSSGYQTASSELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEKGIHRDELSQQLKI 240

Query: 241 PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 272
           P+EKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Sbjct: 241 PLEKILDSIRSLEDEGLIYSTIDEFHFKSAA 270

[Close]

BLAST of CmUC05G098430 vs. TAIR 10
Match: AT2G24490.1 (replicon protein A2 )

HSP 1 Score: 249.6 bits (636), Expect = 2.9e-66
Identity = 135/281 (48.04%), Postives = 193/281 (68.68%), Query Frame = 0


Query: 1   MFSSTQFD-----SASGFTSSQSNE-----SSTTKSRESPGLVPVTVKQISEASHSGEEK 60
           MFSS+QF+     S  GF SSQ ++     SST K+R+  GLVPVTVKQI+E   S  EK
Sbjct: 1   MFSSSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEK 60

Query: 61  ANFVINGVDITNVTVVGKVSEKAE-RNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQ 120
           +  VING+ +TNV++VG V +K E + T++ FT+DDGTG I CKRWV++TFD ++ME ++
Sbjct: 61  SGLVINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVR 120

Query: 121 DGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGST 180
           DG YVR++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q       T
Sbjct: 121 DGTYVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQRQQVGDVT 180

Query: 181 QFQSSDSTLKTPVQNGSSGYMTA--SSGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKER 240
           Q      ++ T  Q GS+       +  + S+ +  + +KN D+++LDYL+ P+  A+++
Sbjct: 181 Q------SVNTTFQGGSNTNQATLLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQ 240

Query: 241 GIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFK 269
           GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Sbjct: 241 GIHIDEIAQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFK 275

[Close]

BLAST of CmUC05G098430 vs. TAIR 10
Match: AT2G24490.2 (replicon protein A2 )

HSP 1 Score: 249.6 bits (636), Expect = 2.9e-66
Identity = 135/281 (48.04%), Postives = 193/281 (68.68%), Query Frame = 0


Query: 1   MFSSTQFD-----SASGFTSSQSNE-----SSTTKSRESPGLVPVTVKQISEASHSGEEK 60
           MFSS+QF+     S  GF SSQ ++     SST K+R+  GLVPVTVKQI+E   S  EK
Sbjct: 1   MFSSSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEK 60

Query: 61  ANFVINGVDITNVTVVGKVSEKAE-RNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQ 120
           +  VING+ +TNV++VG V +K E + T++ FT+DDGTG I CKRWV++TFD ++ME ++
Sbjct: 61  SGLVINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVR 120

Query: 121 DGMYVRVNGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGEGST 180
           DG YVR++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q       T
Sbjct: 121 DGTYVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQRQQVGDVT 180

Query: 181 QFQSSDSTLKTPVQNGSSGYMTA--SSGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKER 240
           Q      ++ T  Q GS+       +  + S+ +  + +KN D+++LDYL+ P+  A+++
Sbjct: 181 Q------SVNTTFQGGSNTNQATLLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQ 240

Query: 241 GIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFK 269
           GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Sbjct: 241 GIHIDEIAQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFK 275

[Close]

BLAST of CmUC05G098430 vs. TAIR 10
Match: AT3G02920.1 (Replication protein A, subunit RPA32 )

HSP 1 Score: 186.0 bits (471), Expect = 3.9e-47
Identity = 106/271 (39.11%), Postives = 167/271 (61.62%), Query Frame = 0


Query: 9   SASGFTSSQS-----NESSTTKSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNV 68
           +  GF  SQ+       SS+ K+R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V
Sbjct: 13  AGGGFMPSQATTQAHESSSSLKNRDVRTLLPLTLKQLSSASTTGE--SNFSIDGVDIKTV 72

Query: 69  TVVGKVSEKAERNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIF 128
            +VG++S    R T + F +DDGTG + C RW +   +T++ME ++ GMYVR++GHLKIF
Sbjct: 73  VIVGRISRMENRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKLGMYVRLHGHLKIF 132

Query: 129 QSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQN---LNGEGSTQFQSSDSTLKT 188
           Q  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+         + + Q   ST+ T
Sbjct: 133 QGKRSVNVFSVRPVTDFNEIVHHFTECMYVHMYNTKLRGGSITQDTATPRPQMPYSTMPT 192

Query: 189 PVQNGSSGYMTASSGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKI 248
           P +   +G    S+  P++ +  D      + VL+YL  P  +  E G+H D ++++L+I
Sbjct: 193 PAKPYQTG---PSNQFPNQFN--DSMHGVKQTVLNYLNQPMHIVSEAGVHCDIIARELRI 252

Query: 249 PMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 272
           P+ ++  ++  L ++G IYST+DE  FKS A
Sbjct: 253 PLLQVKEALEQLSNDGCIYSTLDETCFKSTA 276

[Close]

BLAST of CmUC05G098430 vs. TAIR 10
Match: AT3G02920.2 (Replication protein A, subunit RPA32 )

HSP 1 Score: 183.7 bits (465), Expect = 1.9e-46
Identity = 102/260 (39.23%), Postives = 162/260 (62.31%), Query Frame = 0


Query: 15  SSQSNESSTTKSRESPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTVVGKVSEKAE 74
           S  S   S+ ++R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V +VG++S    
Sbjct: 44  SGISAAKSSIRNRDVRTLLPLTLKQLSSASTTGE--SNFSIDGVDIKTVVIVGRISRMEN 103

Query: 75  RNTDITFTIDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQSNKQIFAFSV 134
           R T + F +DDGTG + C RW +   +T++ME ++ GMYVR++GHLKIFQ  + +  FSV
Sbjct: 104 RITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKLGMYVRLHGHLKIFQGKRSVNVFSV 163

Query: 135 RPVTNFDEITFHFIECIHDHLRNSKLQN---LNGEGSTQFQSSDSTLKTPVQNGSSGYMT 194
           RPVT+F+EI  HF EC++ H+ N+KL+         + + Q   ST+ TP +   +G   
Sbjct: 164 RPVTDFNEIVHHFTECMYVHMYNTKLRGGSITQDTATPRPQMPYSTMPTPAKPYQTG--- 223

Query: 195 ASSGIPSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRS 254
            S+  P++ +  D      + VL+YL  P  +  E G+H D ++++L+IP+ ++  ++  
Sbjct: 224 PSNQFPNQFN--DSMHGVKQTVLNYLNQPMHIVSEAGVHCDIIARELRIPLLQVKEALEQ 283

Query: 255 LEDEGLIYSTIDEFHFKSAA 272
           L ++G IYST+DE  FKS A
Sbjct: 284 LSNDGCIYSTLDETCFKSTA 296

The following BLAST results are available for this feature:

BLAST of CmUC05G098430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897330.1	1.4e-139	94.46	replication protein A 32 kDa subunit A-like [Benincasa hispida]	[more]
XP_008466326.1	7.2e-136	92.25	PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis melo]	[more]
XP_004136317.1	1.6e-135	91.51	replication protein A 32 kDa subunit A [Cucumis sativus] >KGN60158.1 hypothetica...	[more]
XP_022936562.1	6.1e-135	90.41	replication protein A 32 kDa subunit A-like [Cucurbita moschata]	[more]
KAG7024504.1	1.5e-133	89.67	Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosper...	[more]

BLAST of CmUC05G098430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQ19	4.0e-65	48.04	Replication protein A 32 kDa subunit A OS=Arabidopsis thaliana OX=3702 GN=RPA2A ...	[more]
Q6K9U2	2.2e-47	42.20	Replication protein A 32 kDa subunit A OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q8LFJ8	5.5e-46	39.11	Replication protein A 32 kDa subunit B OS=Arabidopsis thaliana OX=3702 GN=RPA2B ...	[more]
Q6H7J5	4.3e-43	37.14	Replication protein A 32 kDa subunit B OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q5Z8L1	2.7e-24	41.25	Replication protein A 32 kDa subunit C OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of CmUC05G098430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CR64	3.5e-136	92.25	replication protein A 32 kDa subunit A-like OS=Cucumis melo OX=3656 GN=LOC103503...	[more]
A0A0A0LEG7	7.8e-136	91.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881710 PE=3 SV=1	[more]
A0A6J1F8S8	2.9e-135	90.41	replication protein A 32 kDa subunit A-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IMU1	1.4e-132	89.01	replication protein A 32 kDa subunit A-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1CUB8	4.9e-122	85.61	replication protein A 32 kDa subunit A OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of CmUC05G098430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24490.1	2.9e-66	48.04	replicon protein A2	[more]
AT2G24490.2	2.9e-66	48.04	replicon protein A2	[more]
AT3G02920.1	3.9e-47	39.11	Replication protein A, subunit RPA32	[more]
AT3G02920.2	1.9e-46	39.23	Replication protein A, subunit RPA32	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014892	Replication protein A, C-terminal	PFAM	PF08784	RPA_C	coord: 154..264 e-value: 3.7E-15 score: 56.5
None	No IPR available	GENE3D	2.40.50.140		coord: 29..160 e-value: 1.2E-42 score: 146.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR13989:SF34	REPLICATION PROTEIN A 32 KDA SUBUNIT A	coord: 1..270
None	No IPR available	CDD	cd04478	RPA2_DBD_D	coord: 62..155 e-value: 1.41929E-42 score: 138.886
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 203..271 e-value: 2.9E-16 score: 60.9
IPR004365	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type	PFAM	PF01336	tRNA_anti-codon	coord: 63..135 e-value: 3.0E-10 score: 39.9
IPR014646	Replication factor A protein 2	PIRSF	PIRSF036949	RPA32	coord: 1..271 e-value: 8.8E-74 score: 245.9
IPR040260	Replication factor A protein-like	PANTHER	PTHR13989	REPLICATION PROTEIN A-RELATED	coord: 1..270
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 206..269
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 32..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC05G098430.1	CmUC05G098430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006260	DNA replication
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
cellular_component	GO:0000781	chromosome, telomeric region
cellular_component	GO:0005662	DNA replication factor A complex
cellular_component	GO:0035861	site of double-strand break
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003676	nucleic acid binding