CmUC05G097890 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC05G097890
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Ethylene-responsive transcription factor SHINE 2-like
Location	CmU531Chr05: 27467072 .. 27468542 (+)
RNA-Seq Expression	CmUC05G097890
Synteny	CmUC05G097890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCCATTGGTTGGAGAATCCTCTGTTACCTCCCATTTTATGTCTGCTGCCCATAACCTGTTTGTTGATTTGCCTGAAAGAAACTAGGCGCCTATGGCGGCGTATAGTTCTGCAGATTTGTACACCAAATTGTTGTATGTTTTTGCGTTATCTGGCTTGTGTTTGTTGGATCAATAAGGCTCTGAAACCCCATCTTTTTTCTGGTATCCATAATGTGTTTGTTGATTTGCCTGAAAGAAGATGGGAGGCCATGGCATGCAAATATCTGCAGATTTGTGAAGTGTATTATTTCTTACAGACATTGTGTATTTCTCTGCTGTAAATGTATGCATTACTTGTGTTTGTTGGTTAAAAGAAAGCTCTGAAAAAGTGAAAAAAACCCATCTTCTTTCTTATGCCTTCAACCTGTTTGTTGATTATTGGCCATGCTCATTTCTGCTCCACATTACACCTTGAACCCACATTACAACTTGAGCTCATTTCTGCTCTACATTACACCGTGAGCCCACATTCTTATACTTTTCATGTGTTTATTTCTTTGTAGGAAGAGAAGGGTGTGGCTGGGGACATTTGACACAGCAGAGGATGCAGCTCGAGCGTATGATCAAGCAGCCATTTTGATGAATGGCCAAAACGCCAAGACCAATTTCCCTGCATCTAAAGACCAATCTGAAGAAGCTAGCCATGGCCATGGTTCTTCTTCAATGTCCCCAAAAGCACTTTCAGAGCTACTCAGCACAAAGCTCAGAAAGTGCTGCAAGAATCCATCTCCCTCATTGACATGCCTGCGGCTCGACAGTGACAACGCTCACATCGGCGTATGGCAGAAGCGTGCAGGCACTCGAGCAACCTCTAATTGGGTCATGAGGATTGAGCTAGGGAAGAAAGAGATGCCGTCCCCGTCCCTGTCGCCTGAATTGACAAGCCAGGAAGCTGATGACCATGGGAATGGAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTACTCAATTGGAACTGCCCTCTTCCTTCTACTTCAAGCTAAGTACAAGATCTCAACACAAAATTCAACTCTAAAAAGAAAATGAAAAAAAAAACTTATAAGATCAAAACAAAGAGGCTTAATTAATCTGTGTGTTTGACTGTGTATGTGTATATACATACATACATATACATACATACATATATATATATATATATATATATCTGTTATGCTTACTGTTTCTATTACTATCAGCTTATGTAAAGCTGTTTATGGGACTTGGGAAGCTCAAAATCTGTATAAAGGGGGAGCTTTTGCATATAGATAAGTTGCTGTTTTATGTCAGTTTGAATCAAAATATCGTAGGAGACTTGTCATCTTTTGTAAGTATCTATATGTATTTATATATATATATATATATATATATATATAAATAGAAAGGAAAAAAGTTTGCAGATGATGAGCAAAGGAGTATTGGGTGATGTTGATAAATGG

mRNA sequence

ATGTGCCATTGGTTGGAGAATCCTCTGTTACCTCCCATTTTATGTCTGCTGCCCATAACCTGTTTGTTGATTTGCCTGAAAGAAACTAGGCGCCTATGGCGGCGTATAGTTCTGCAGATTTGTACACCAAATTGTTGTATGTTTTTGCGTTATCTGGCTTGTGTTTGTTGGATCAATAAGGCTCTGAAACCCCATCTTTTTTCTGGTATCCATAATGTGTTTGTTGATTTGCCTGAAAGAAGATGGGAGGCCATGGCATGCAAATATCTGCAGATTTGTGAAGTGTATTATTTCTTACAGACATTGTGTATTTCTCTGCTGAAGAGAAGGGTGTGGCTGGGGACATTTGACACAGCAGAGGATGCAGCTCGAGCGTATGATCAAGCAGCCATTTTGATGAATGGCCAAAACGCCAAGACCAATTTCCCTGCATCTAAAGACCAATCTGAAGAAGCTAGCCATGGCCATGGTTCTTCTTCAATGTCCCCAAAAGCACTTTCAGAGCTACTCAGCACAAAGCTCAGAAAGTGCTGCAAGAATCCATCTCCCTCATTGACATGCCTGCGGCTCGACAGTGACAACGCTCACATCGGCGTATGGCAGAAGCGTGCAGGCACTCGAGCAACCTCTAATTGGGTCATGAGGATTGAGCTAGGGAAGAAAGAGATGCCGTCCCCGTCCCTGTCGCCTGAATTGACAAGCCAGGAAGCTGATGACCATGGGAATGGAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTACTCAATTGGAACTGCCCTCTTCCTTCTACTTCAAGCTAAGTACAAGATCTCAACACAAAATTCAACTCTAAAAAGAAAATGAAAAAAAAAACTTATAAGATCAAAACAAAGAGGCTTAATTAATCTGTGTGTTTGACTGTGTATGTGTATATACATACATACATATACATACATACATATATATATATATATATATATATCTGTTATGCTTACTGTTTCTATTACTATCAGCTTATGTAAAGCTGTTTATGGGACTTGGGAAGCTCAAAATCTGTATAAAGGGGGAGCTTTTGCATATAGATAAGTTGCTGTTTTATGTCAGTTTGAATCAAAATATCGTAGGAGACTTGTCATCTTTTGTAAGTATCTATATGTATTTATATATATATATATATATATATATATATAAATAGAAAGGAAAAAAGTTTGCAGATGATGAGCAAAGGAGTATTGGGTGATGTTGATAAATGG

Coding sequence (CDS)

ATGTGCCATTGGTTGGAGAATCCTCTGTTACCTCCCATTTTATGTCTGCTGCCCATAACCTGTTTGTTGATTTGCCTGAAAGAAACTAGGCGCCTATGGCGGCGTATAGTTCTGCAGATTTGTACACCAAATTGTTGTATGTTTTTGCGTTATCTGGCTTGTGTTTGTTGGATCAATAAGGCTCTGAAACCCCATCTTTTTTCTGGTATCCATAATGTGTTTGTTGATTTGCCTGAAAGAAGATGGGAGGCCATGGCATGCAAATATCTGCAGATTTGTGAAGTGTATTATTTCTTACAGACATTGTGTATTTCTCTGCTGAAGAGAAGGGTGTGGCTGGGGACATTTGACACAGCAGAGGATGCAGCTCGAGCGTATGATCAAGCAGCCATTTTGATGAATGGCCAAAACGCCAAGACCAATTTCCCTGCATCTAAAGACCAATCTGAAGAAGCTAGCCATGGCCATGGTTCTTCTTCAATGTCCCCAAAAGCACTTTCAGAGCTACTCAGCACAAAGCTCAGAAAGTGCTGCAAGAATCCATCTCCCTCATTGACATGCCTGCGGCTCGACAGTGACAACGCTCACATCGGCGTATGGCAGAAGCGTGCAGGCACTCGAGCAACCTCTAATTGGGTCATGAGGATTGAGCTAGGGAAGAAAGAGATGCCGTCCCCGTCCCTGTCGCCTGAATTGACAAGCCAGGAAGCTGATGACCATGGGAATGGAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTACTCAATTGGAACTGCCCTCTTCCTTCTACTTCAAGCTAA

Protein sequence

MCHWLENPLLPPILCLLPITCLLICLKETRRLWRRIVLQICTPNCCMFLRYLACVCWINKALKPHLFSGIHNVFVDLPERRWEAMACKYLQICEVYYFLQTLCISLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSSMSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEMPSPSLSPELTSQEADDHGNGIDEEDRIAMQMIEELLNWNCPLPSTSS

Homology

[Close]

BLAST of CmUC05G097890 vs. NCBI nr
Match: XP_038899931.1 (ethylene-responsive transcription factor SHINE 2-like isoform X3 [Benincasa hispida])

HSP 1 Score: 310.1 bits (793), Expect = 1.9e-80
Identity = 156/165 (94.55%), Postives = 158/165 (95.76%), Query Frame = 0


Query: 106 LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSSMSPKA 165
           LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSS MSPKA
Sbjct: 41  LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSPMSPKA 100

Query: 166 LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEMPS 225
           LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKK++PS
Sbjct: 101 LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKDVPS 160

Query: 226 PSLSPELTSQEA--DDHGNGIDEEDRIAMQMIEELLNWNCPLPST 269
           PS SPE TSQEA  D H NGIDEEDRIAMQMIEELLNWNCPLPST
Sbjct: 161 PSPSPESTSQEADGDGHRNGIDEEDRIAMQMIEELLNWNCPLPST 205

[Close]

BLAST of CmUC05G097890 vs. NCBI nr
Match: XP_038899928.1 (ethylene-responsive transcription factor SHINE 2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 310.1 bits (793), Expect = 1.9e-80
Identity = 156/165 (94.55%), Postives = 158/165 (95.76%), Query Frame = 0


Query: 106 LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSSMSPKA 165
           LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSS MSPKA
Sbjct: 66  LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSPMSPKA 125

Query: 166 LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEMPS 225
           LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKK++PS
Sbjct: 126 LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKDVPS 185

Query: 226 PSLSPELTSQEA--DDHGNGIDEEDRIAMQMIEELLNWNCPLPST 269
           PS SPE TSQEA  D H NGIDEEDRIAMQMIEELLNWNCPLPST
Sbjct: 186 PSPSPESTSQEADGDGHRNGIDEEDRIAMQMIEELLNWNCPLPST 230

[Close]

BLAST of CmUC05G097890 vs. NCBI nr
Match: XP_038899932.1 (ethylene-responsive transcription factor SHINE 2-like isoform X4 [Benincasa hispida] >XP_038899933.1 ethylene-responsive transcription factor SHINE 2-like isoform X4 [Benincasa hispida] >XP_038899934.1 ethylene-responsive transcription factor SHINE 2-like isoform X4 [Benincasa hispida])

HSP 1 Score: 310.1 bits (793), Expect = 1.9e-80
Identity = 156/165 (94.55%), Postives = 158/165 (95.76%), Query Frame = 0


Query: 106 LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSSMSPKA 165
           LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSS MSPKA
Sbjct: 26  LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSPMSPKA 85

Query: 166 LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEMPS 225
           LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKK++PS
Sbjct: 86  LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKDVPS 145

Query: 226 PSLSPELTSQEA--DDHGNGIDEEDRIAMQMIEELLNWNCPLPST 269
           PS SPE TSQEA  D H NGIDEEDRIAMQMIEELLNWNCPLPST
Sbjct: 146 PSPSPESTSQEADGDGHRNGIDEEDRIAMQMIEELLNWNCPLPST 190

[Close]

BLAST of CmUC05G097890 vs. NCBI nr
Match: XP_038899930.1 (ethylene-responsive transcription factor SHINE 2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 310.1 bits (793), Expect = 1.9e-80
Identity = 156/165 (94.55%), Postives = 158/165 (95.76%), Query Frame = 0


Query: 106 LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSSMSPKA 165
           LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSS MSPKA
Sbjct: 58  LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSPMSPKA 117

Query: 166 LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEMPS 225
           LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKK++PS
Sbjct: 118 LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKDVPS 177

Query: 226 PSLSPELTSQEA--DDHGNGIDEEDRIAMQMIEELLNWNCPLPST 269
           PS SPE TSQEA  D H NGIDEEDRIAMQMIEELLNWNCPLPST
Sbjct: 178 PSPSPESTSQEADGDGHRNGIDEEDRIAMQMIEELLNWNCPLPST 222

[Close]

BLAST of CmUC05G097890 vs. NCBI nr
Match: XP_022936545.1 (ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita moschata] >XP_022936547.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita moschata] >XP_022936548.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita moschata] >XP_022936549.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita moschata])

HSP 1 Score: 309.3 bits (791), Expect = 3.3e-80
Identity = 154/165 (93.33%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 106 LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSSMSPKA 165
           LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQS EASHGHGSS M+PKA
Sbjct: 26  LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKA 85

Query: 166 LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEMPS 225
           LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKE+PS
Sbjct: 86  LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPS 145

Query: 226 PSLSPELTSQEADDHGNGIDEEDRIAMQMIEELLNWNCPLPSTSS 271
           P  SPE TSQE D H NGIDEEDRIAMQMIEELLNWNCPLPS SS
Sbjct: 146 PLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS 190

[Close]

BLAST of CmUC05G097890 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.3e-44
Identity = 94/159 (59.12%), Postives = 116/159 (72.96%), Query Frame = 0


Query: 106 LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSSMSPKA 165
           LLKRRVWLGTFDTAE AARAYDQAA+LMNGQ+AKTNFP  K      S    S+  SPK+
Sbjct: 26  LLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPVIKSNGSN-SLEINSALRSPKS 85

Query: 166 LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEMPS 225
           LSELL+ KLRK CK+ +P LTCLRLD+D++HIGVWQKRAG++ + NWV  +ELG K    
Sbjct: 86  LSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAGSKTSPNWVKLVELGDKVNAR 145

Query: 226 PSLSPELTSQEADDHGNGIDEEDRIAMQMIEELLNWNCP 265
           P    ++ + +       + E+D++AMQMIEELLNW CP
Sbjct: 146 P--GGDIETNKMKVRNEDVQEDDQMAMQMIEELLNWTCP 181

[Close]

BLAST of CmUC05G097890 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.9e-44
Identity = 97/166 (58.43%), Postives = 124/166 (74.70%), Query Frame = 0


Query: 106 LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEAS---HGHGSSSMS 165
           LLKRRVWLGTF+TAE AARAYDQAA+LMNGQNAKTNFP  K  SEE S       S  MS
Sbjct: 26  LLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPVVK--SEEGSDHVKDVNSPLMS 85

Query: 166 PKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGK-- 225
           PK+LSELL+ KLRK CK+ +PSLTCLRLD+D++HIGVWQKRAG++ +  WVMR+ELG   
Sbjct: 86  PKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKRAGSKTSPTWVMRLELGNVV 145

Query: 226 ----KEMPSPSLSPELTSQEADDHGNGIDEEDRIAMQMIEELLNWN 263
                ++   +++ +   +E ++    I +ED++AM+MIEELLNW+
Sbjct: 146 NESAVDLGLTTMNKQNVEKEEEEEEAIISDEDQLAMEMIEELLNWS 189

[Close]

BLAST of CmUC05G097890 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.3e-43
Identity = 93/174 (53.45%), Postives = 121/174 (69.54%), Query Frame = 0


Query: 106 LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHG-------- 165
           LLKRR+WLGTF+TAE+AARAYD+AA+LM+G+NAKTNFP + + + E S G          
Sbjct: 26  LLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPLNNNNTGETSEGKTDISASSTM 85

Query: 166 SSSMSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIE 225
           SSS S  +LS +LS KLRKCCK+PSPSLTCLRLD+ ++HIGVWQKRAG+++ S+WVM +E
Sbjct: 86  SSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTASSHIGVWQKRAGSKSDSSWVMTVE 145

Query: 226 LG---------KKEMPSPSLSPELTSQEADDHGNGIDEEDRIAMQMIEELLNWN 263
           LG          K      L+P    +        +DEE+++A+QMIEELLN N
Sbjct: 146 LGPASSSQETTSKASQDAILAPTTEVEIGGSREEVLDEEEKVALQMIEELLNTN 199

[Close]

BLAST of CmUC05G097890 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.8e-10
Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 0


Query: 106 LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSSMSPKA 165
           LLK R+WLGTF+TAEDAARAYD+AA LM G  A+TNFP +          +   + S K 
Sbjct: 27  LLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNP---------NAIPTSSSKL 86

Query: 166 LSELLSTKLRKC 178
           LS  L+ KL KC
Sbjct: 87  LSATLTAKLHKC 89

[Close]

BLAST of CmUC05G097890 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.1e-09
Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 105 SLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSSMSPK 164
           S+LK R+W GTF++AEDAARAYD+AA LM G  A+TNFP + + S+         S S K
Sbjct: 26  SILKTRIWQGTFESAEDAARAYDEAARLMCGTRARTNFPYNPNASQ---------SSSSK 85

Query: 165 ALSELLSTKLRKC 178
            LS  L  KL +C
Sbjct: 86  LLSATLIAKLHRC 89

[Close]

BLAST of CmUC05G097890 vs. ExPASy TrEMBL
Match: A0A6J1FE03 (ethylene-responsive transcription factor SHINE 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443124 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.6e-80
Identity = 154/165 (93.33%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 106 LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSSMSPKA 165
           LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQS EASHGHGSS M+PKA
Sbjct: 26  LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKA 85

Query: 166 LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEMPS 225
           LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKE+PS
Sbjct: 86  LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPS 145

Query: 226 PSLSPELTSQEADDHGNGIDEEDRIAMQMIEELLNWNCPLPSTSS 271
           P  SPE TSQE D H NGIDEEDRIAMQMIEELLNWNCPLPS SS
Sbjct: 146 PLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS 190

[Close]

BLAST of CmUC05G097890 vs. ExPASy TrEMBL
Match: A0A6J1F8L5 (ethylene-responsive transcription factor SHINE 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443124 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.6e-80
Identity = 154/165 (93.33%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 106 LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSSMSPKA 165
           LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQS EASHGHGSS M+PKA
Sbjct: 31  LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKA 90

Query: 166 LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEMPS 225
           LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKE+PS
Sbjct: 91  LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPS 150

Query: 226 PSLSPELTSQEADDHGNGIDEEDRIAMQMIEELLNWNCPLPSTSS 271
           P  SPE TSQE D H NGIDEEDRIAMQMIEELLNWNCPLPS SS
Sbjct: 151 PLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS 195

[Close]

BLAST of CmUC05G097890 vs. ExPASy TrEMBL
Match: A0A6J1FE08 (ethylene-responsive transcription factor SHINE 3 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111443124 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 1.0e-79
Identity = 152/163 (93.25%), Postives = 154/163 (94.48%), Query Frame = 0


Query: 108 KRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSSMSPKALS 167
           KRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQS EASHGHGSS M+PKALS
Sbjct: 5   KRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALS 64

Query: 168 ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEMPSPS 227
           ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKE+PSP 
Sbjct: 65  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPL 124

Query: 228 LSPELTSQEADDHGNGIDEEDRIAMQMIEELLNWNCPLPSTSS 271
            SPE TSQE D H NGIDEEDRIAMQMIEELLNWNCPLPS SS
Sbjct: 125 PSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS 167

[Close]

BLAST of CmUC05G097890 vs. ExPASy TrEMBL
Match: A0A6J1IIU8 (ethylene-responsive transcription factor SHINE 2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476664 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 1.3e-79
Identity = 155/167 (92.81%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 106 LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEAS--HGHGSSSMSP 165
           LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQS EAS  HGHGSS M+P
Sbjct: 26  LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGHGSSPMTP 85

Query: 166 KALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEM 225
           KALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKE+
Sbjct: 86  KALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEI 145

Query: 226 PSPSLSPELTSQEADDHGNGIDEEDRIAMQMIEELLNWNCPLPSTSS 271
           PSP  SPE TSQEAD H NGIDEEDRIAMQMIEELLNWNCPLPS SS
Sbjct: 146 PSPLPSPESTSQEADGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS 192

[Close]

BLAST of CmUC05G097890 vs. ExPASy TrEMBL
Match: A0A6J1IGA2 (ethylene-responsive transcription factor SHINE 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476664 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 1.3e-79
Identity = 155/167 (92.81%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 106 LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEAS--HGHGSSSMSP 165
           LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQS EAS  HGHGSS M+P
Sbjct: 31  LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGHGSSPMTP 90

Query: 166 KALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEM 225
           KALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKE+
Sbjct: 91  KALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEI 150

Query: 226 PSPSLSPELTSQEADDHGNGIDEEDRIAMQMIEELLNWNCPLPSTSS 271
           PSP  SPE TSQEAD H NGIDEEDRIAMQMIEELLNWNCPLPS SS
Sbjct: 151 PSPLPSPESTSQEADGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS 197

[Close]

BLAST of CmUC05G097890 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 181.4 bits (459), Expect = 9.6e-46
Identity = 94/159 (59.12%), Postives = 116/159 (72.96%), Query Frame = 0


Query: 106 LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSSMSPKA 165
           LLKRRVWLGTFDTAE AARAYDQAA+LMNGQ+AKTNFP  K      S    S+  SPK+
Sbjct: 26  LLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPVIKSNGSN-SLEINSALRSPKS 85

Query: 166 LSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEMPS 225
           LSELL+ KLRK CK+ +P LTCLRLD+D++HIGVWQKRAG++ + NWV  +ELG K    
Sbjct: 86  LSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAGSKTSPNWVKLVELGDKVNAR 145

Query: 226 PSLSPELTSQEADDHGNGIDEEDRIAMQMIEELLNWNCP 265
           P    ++ + +       + E+D++AMQMIEELLNW CP
Sbjct: 146 P--GGDIETNKMKVRNEDVQEDDQMAMQMIEELLNWTCP 181

[Close]

BLAST of CmUC05G097890 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 179.9 bits (455), Expect = 2.8e-45
Identity = 97/166 (58.43%), Postives = 124/166 (74.70%), Query Frame = 0


Query: 106 LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEAS---HGHGSSSMS 165
           LLKRRVWLGTF+TAE AARAYDQAA+LMNGQNAKTNFP  K  SEE S       S  MS
Sbjct: 26  LLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPVVK--SEEGSDHVKDVNSPLMS 85

Query: 166 PKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGK-- 225
           PK+LSELL+ KLRK CK+ +PSLTCLRLD+D++HIGVWQKRAG++ +  WVMR+ELG   
Sbjct: 86  PKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKRAGSKTSPTWVMRLELGNVV 145

Query: 226 ----KEMPSPSLSPELTSQEADDHGNGIDEEDRIAMQMIEELLNWN 263
                ++   +++ +   +E ++    I +ED++AM+MIEELLNW+
Sbjct: 146 NESAVDLGLTTMNKQNVEKEEEEEEAIISDEDQLAMEMIEELLNWS 189

[Close]

BLAST of CmUC05G097890 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 176.4 bits (446), Expect = 3.1e-44
Identity = 93/174 (53.45%), Postives = 121/174 (69.54%), Query Frame = 0


Query: 106 LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHG-------- 165
           LLKRR+WLGTF+TAE+AARAYD+AA+LM+G+NAKTNFP + + + E S G          
Sbjct: 26  LLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPLNNNNTGETSEGKTDISASSTM 85

Query: 166 SSSMSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIE 225
           SSS S  +LS +LS KLRKCCK+PSPSLTCLRLD+ ++HIGVWQKRAG+++ S+WVM +E
Sbjct: 86  SSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTASSHIGVWQKRAGSKSDSSWVMTVE 145

Query: 226 LG---------KKEMPSPSLSPELTSQEADDHGNGIDEEDRIAMQMIEELLNWN 263
           LG          K      L+P    +        +DEE+++A+QMIEELLN N
Sbjct: 146 LGPASSSQETTSKASQDAILAPTTEVEIGGSREEVLDEEEKVALQMIEELLNTN 199

[Close]

BLAST of CmUC05G097890 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 172.6 bits (436), Expect = 4.4e-43
Identity = 89/154 (57.79%), Postives = 111/154 (72.08%), Query Frame = 0


Query: 111 VWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSSMSPKALSELL 170
           VWLGTFDTAE AARAYDQAA+LMNGQ+AKTNFP  K      S    S+  SPK+LSELL
Sbjct: 28  VWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPVIKSNGSN-SLEINSALRSPKSLSELL 87

Query: 171 STKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEMPSPSLSP 230
           + KLRK CK+ +P LTCLRLD+D++HIGVWQKRAG++ + NWV  +ELG K    P    
Sbjct: 88  NAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAGSKTSPNWVKLVELGDKVNARP--GG 147

Query: 231 ELTSQEADDHGNGIDEEDRIAMQMIEELLNWNCP 265
           ++ + +       + E+D++AMQMIEELLNW CP
Sbjct: 148 DIETNKMKVRNEDVQEDDQMAMQMIEELLNWTCP 178

[Close]

BLAST of CmUC05G097890 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 3.4e-11
Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 0


Query: 106 LLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSSMSPKA 165
           LLK R+WLGTF+TAEDAARAYD+AA LM G  A+TNFP +          +   + S K 
Sbjct: 27  LLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNP---------NAIPTSSSKL 86

Query: 166 LSELLSTKLRKC 178
           LS  L+ KL KC
Sbjct: 87  LSATLTAKLHKC 89

The following BLAST results are available for this feature:

BLAST of CmUC05G097890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899931.1	1.9e-80	94.55	ethylene-responsive transcription factor SHINE 2-like isoform X3 [Benincasa hisp...	[more]
XP_038899928.1	1.9e-80	94.55	ethylene-responsive transcription factor SHINE 2-like isoform X1 [Benincasa hisp...	[more]
XP_038899932.1	1.9e-80	94.55	ethylene-responsive transcription factor SHINE 2-like isoform X4 [Benincasa hisp...	[more]
XP_038899930.1	1.9e-80	94.55	ethylene-responsive transcription factor SHINE 2-like isoform X2 [Benincasa hisp...	[more]
XP_022936545.1	3.3e-80	93.33	ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita moschata]...	[more]

BLAST of CmUC05G097890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3E958	1.3e-44	59.12	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LFN7	3.9e-44	58.43	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]
Q9XI33	4.3e-43	53.45	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q94AW5	4.8e-10	52.78	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	1.1e-09	50.68	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]

BLAST of CmUC05G097890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FE03	1.6e-80	93.33	ethylene-responsive transcription factor SHINE 2 isoform X2 OS=Cucurbita moschat...	[more]
A0A6J1F8L5	1.6e-80	93.33	ethylene-responsive transcription factor SHINE 2 isoform X1 OS=Cucurbita moschat...	[more]
A0A6J1FE08	1.0e-79	93.25	ethylene-responsive transcription factor SHINE 3 isoform X3 OS=Cucurbita moschat...	[more]
A0A6J1IIU8	1.3e-79	92.81	ethylene-responsive transcription factor SHINE 2 isoform X2 OS=Cucurbita maxima ...	[more]
A0A6J1IGA2	1.3e-79	92.81	ethylene-responsive transcription factor SHINE 2 isoform X1 OS=Cucurbita maxima ...	[more]

BLAST of CmUC05G097890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25390.2	9.6e-46	59.12	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	2.8e-45	58.43	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	3.1e-44	53.45	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	4.4e-43	57.79	Integrase-type DNA-binding superfamily protein	[more]
AT5G25190.1	3.4e-11	52.78	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 100..149 e-value: 1.0E-12 score: 58.3
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 108..135 e-value: 1.9E-6 score: 28.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 66..143 score: 14.156986
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 107..145 e-value: 7.82522E-19 score: 76.1563
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 67..145 e-value: 2.8E-16 score: 61.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..243
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 106..268
None	No IPR available	PANTHER	PTHR31194:SF13	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SHINE 2	coord: 106..268
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 107..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC05G097890.1	CmUC05G097890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity