CmUC05G097750 (gene) Watermelon (USVL531) v1

Overview
NameCmUC05G097750
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionTetratricopeptide repeat protein like
LocationCmU531Chr05: 27331088 .. 27334189 (+)
RNA-Seq ExpressionCmUC05G097750
SyntenyCmUC05G097750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTGGTTGGAGAGGAGAGTTTACTCCCCTCCACTACTTCACAAATAACTCCCAAAAGAGTTATTTCCTTATTTAATAATATATATTAAATTAAATTATATATATATATATATATTAAATAATATTAATTAATTAATTAATTAAATATCAGATATTTAATTTTATTTTATTATATTCAAATAATATTCTCTCACATGAATCTTTCAAGATTCATATTAATTTTAACATACAATTTCATTTGAATCTCATTCATATAATTAATATTTAAATTTTATTCAAATATTTATCTATCTCATAAAGTTCAATTTTGAATCTCATTCAAAATTAACTTTATATTATAATGTGTCCACATACACTATATTAATTGTATCTTATATAATTAATTCTCTTATTTAACTTGAGCAATTCAAATTAATCCAAAATTAATTTATTCTTGTTTTACCCTTAATGAGCTAGCAAAGGGATTTAATGGACTTACAAATTAGAAGCTTCAATGATACGAAATTAATTAATTAAACTCTTGAATTAAATAAATCAACATTTATTAACTGCAGGTCACTCCAATAAAGACCCACAACTGCATTCTTCGCACTATAGAACTTGTTGCATCCATGGATTTAACCATTACATGTAAATTGATCTTTCATGAGTAGTTCGTAACAACAACTGGGTTAAATGTCTGTTATACCCCTCTATTACCTCTTTCTCCTTAAGTACCATTGCTCCCTTTAATAAACAATCTGTTTGTGGTCCTACTATGAACCAAGTTCTTCTCAGGCCAATGAGAGGGCCAGGTACCATTTGTTCAAGACTTGAAATCAACACTTAAAGAAACTACTCGTCTACTTACCCTAAAGGCGGAAAGAGGTGAATTTCATCTTGTGTAGTTATGTTCCCAATTCCCCACTCGATCTCGTCCTTACGACATGGGCTACCCTCACCCATACAAATCAAAGGACAAGCCCTCACATGCAAGAATCCATAACTCACTTAAGATTGAGACCAAGTTACATATGGCTATCCTATGAAATACAAATCTCTTCTGTCAACAGCATTACAAAGAGAGATTAAGTATTTCGCTGTTCAGTCTTATACAATTTCATTGTATAAGATACCCGTACTTGCATGTCTCCACACAATCAATTCAGATCACATTGTTTGTAACATTTACAACATTTGTAACACTTACAAAGTGGGTCGTATCTATAGTGCTAATTACCAGGATAAAATACCCAACCTTATCCATATACTATAAACCGCTTAGATTATTACTTGCGCATTATCCACCTGTATGTCCACTACATACTGTTTAAGTTTTATGAAATGACTTTGAATTTTTCCGTAATAGATAACTCATTATTTCATATTTTAAATAATCAACTATTATATCTAGCAACTAATTAACTATGAGGCTTTAGGGCATAAATTTCAATAATCTCCCACTTGCACTAAAGATGGTGAGACGTGTATCTTAGTGCATATTCTATACCTAACCTGTTTATCCCACTTTCCCTAGCGCATAAGAGACATGTCTTGTAGTTTTAGACATTCTAAGTGTCCTTCACACACTTTAGCCTAAAGAGTCCTTTTATATAAATAAAAAACTATGTCACAAAAACCATCTTGGGTCACTACCATGATGCATGTTTGTGCCTTTCCCTTGATTCTGGTATTTACTAATATCCTCAGTTTTAGTCTTTATGTCACTATATCTCATAAAGTGTGATAGCCTAAATTACATATGAAACGTGTTTAAGGATATTTATGACTACCCAAATTATTGCTTTATAAACAAAACAATTGTCTTATAGTCCATGCTACACCATCTAGGAAAAAAACTTAACATGGATTTCTCTAAATCCCTATTAGAGATCTTGTAAAGACCAAATCTTAAATTTTATACACTTAAATTTCTCATCGTCCATAGTTTTTTTTGAGAAAATTCTTTAATTTCATATTCAATAGTCATAGTCATACCATTGACTTGAAGGAGAATTGAATTCCTCAGCAAAAGCGAAAGATCACCTTGTGCAAATGAATTTCCTTTTGGAAAACATAAAATGGAGAAAATAAAACATACAGAATAAACAGCTAAATTACAACATGCTTTAAGGAAAATTTAAGGAAGAAAGGATATTAACCTTTGAAGACCTTCTTCTTGGTAATTCTCTTTTTCTTGGTCGGAACTCACGAACTCCAAAAACGTACTCAAACTCAATGCAAGAGAAACTTCTTTGGACACCACCAAAAAGATTTTGGGAAATTGCCAAAAATAAGACAATTTCATGGGGTTAAAGAGTTTTGGGATCAATTTTAAAAAAGAAGACTTTTAAGACAAATGAACATATGAAGTGTCCAAATTGCCCCTAAACATTCAATCGTGAAACCCTCTCCTCGCGTGCGACTCTAGCAGGAACCCTCCTCCATCATCGATCTTCCGACTTCCATCGCACGAAGGCAGATCGATCGGACGACGGCGGCGAACAGAAGAAGACGGCAGAACGCTCGGACAGGTTTGCACAGCAGCTGCAGCGGGATCACAGCGAACACATGGACAGCAGCGATGGTGGAGATTTGGACGGCGGCGATGCGTTTTGTCGACATGGATAACAACTTCTCGGACAGCAGAAGTAAATTCGATGGAGGTGTAGCAGGTATATCTTTTCCATAAAGGTTATAAATGTAGGAGTTTATGGTTATATAATTGTTAGTACTTCATCAACTCACTTCTCCTCTTCCACTGCTCTAACCCAACAAAAACCATCTCTGAATCTGCCCAAAATTTGAAGCTTTACCGAAGCAAGAAGAAGAAAGGTCCCAAAAAAATATCTTGCTTGATCTTTGAGAATCTTAGAAAGTTGAAGGAGAGCTTCCATCCAAATGATTTGAAATGCTCCCATTCCAGAAGGGTTTACAGAAACTCCTCAGATTTTTACTTCAGAAATCGATACAAATTGGGAAACTTCAATCTCCTTTGACATTCCTGATCATGTTCCTAATTTGTGTAATGAGTGTGAGAAGCTTCATAGGCATTGTGGAGTGGGTTTGAGATGCATATACCGTGTTCTTGAGTGTAGTTTGTTTCTAACAATTGCATAA

mRNA sequence

ATGAAGTGGCAGATCGATCGGACGACGGCGGCGAACAGAAGAAGACGGCAGAACGCTCGGACAGGTTTGCACAGCAGCTGCAGCGGGATCACAGCGAACACATGGACAGCAGCGATGGTGGAGATTTGGACGGCGGCGATGCGTTTTGTCGACATGGATAACAACTTCTCGGACAGCAGAAGTAAATTCGATGGAGGTGTAGCAGAAGGGTTTACAGAAACTCCTCAGATTTTTACTTCAGAAATCGATACAAATTGGGAAACTTCAATCTCCTTTGACATTCCTGATCATGTTCCTAATTTGTGTAATGAGTGTGAGAAGCTTCATAGGCATTGTGGAGTGGGTTTGAGATGCATATACCGTGTTCTTGAGTGTAGTTTGTTTCTAACAATTGCATAA

Coding sequence (CDS)

ATGAAGTGGCAGATCGATCGGACGACGGCGGCGAACAGAAGAAGACGGCAGAACGCTCGGACAGGTTTGCACAGCAGCTGCAGCGGGATCACAGCGAACACATGGACAGCAGCGATGGTGGAGATTTGGACGGCGGCGATGCGTTTTGTCGACATGGATAACAACTTCTCGGACAGCAGAAGTAAATTCGATGGAGGTGTAGCAGAAGGGTTTACAGAAACTCCTCAGATTTTTACTTCAGAAATCGATACAAATTGGGAAACTTCAATCTCCTTTGACATTCCTGATCATGTTCCTAATTTGTGTAATGAGTGTGAGAAGCTTCATAGGCATTGTGGAGTGGGTTTGAGATGCATATACCGTGTTCTTGAGTGTAGTTTGTTTCTAACAATTGCATAA

Protein sequence

MKWQIDRTTAANRRRRQNARTGLHSSCSGITANTWTAAMVEIWTAAMRFVDMDNNFSDSRSKFDGGVAEGFTETPQIFTSEIDTNWETSISFDIPDHVPNLCNECEKLHRHCGVGLRCIYRVLECSLFLTIA
Homology
[Close]
BLAST of CmUC05G097750 vs. NCBI nr
Match: XP_038893879.1 (uncharacterized protein LOC120082681 [Benincasa hispida])

HSP 1 Score: 74.3 bits (181), Expect = 8.6e-10
Identity = 32/38 (84.21%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 88  TSISFDIPDHVPNLCNECEKLHRHCGVGLRCIYRVLEC 126
           TSISFDIPDHVPNLCNEC+K   HCGVGLRCI  VLEC
Sbjct: 200 TSISFDIPDHVPNLCNECQKPDGHCGVGLRCICHVLEC 237

[Close]
BLAST of CmUC05G097750 vs. NCBI nr
Match: KAA0040940.1 (uncharacterized protein E6C27_scaffold125G001350 [Cucumis melo var. makuwa] >TYK20317.1 uncharacterized protein E5676_scaffold708G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 1.5e-09
Identity = 32/38 (84.21%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 88  TSISFDIPDHVPNLCNECEKLHRHCGVGLRCIYRVLEC 126
           TSISFDIPDHVPNLC+ECEK   HCGVGLRCI  VLEC
Sbjct: 127 TSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLEC 164

[Close]
BLAST of CmUC05G097750 vs. NCBI nr
Match: XP_008461870.1 (PREDICTED: uncharacterized protein LOC103500362 [Cucumis melo])

HSP 1 Score: 73.6 bits (179), Expect = 1.5e-09
Identity = 32/38 (84.21%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 88  TSISFDIPDHVPNLCNECEKLHRHCGVGLRCIYRVLEC 126
           TSISFDIPDHVPNLC+ECEK   HCGVGLRCI  VLEC
Sbjct: 200 TSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLEC 237

[Close]
BLAST of CmUC05G097750 vs. NCBI nr
Match: XP_022152889.1 (uncharacterized protein LOC111020512 [Momordica charantia])

HSP 1 Score: 71.2 bits (173), Expect = 7.3e-09
Identity = 31/38 (81.58%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 88  TSISFDIPDHVPNLCNECEKLHRHCGVGLRCIYRVLEC 126
           T+ISFDIPDHVPNLCNEC K   HCGVGLRCI  VLEC
Sbjct: 193 TTISFDIPDHVPNLCNECGKPGGHCGVGLRCICHVLEC 230

[Close]
BLAST of CmUC05G097750 vs. NCBI nr
Match: XP_031736033.1 (uncharacterized protein LOC101222629 isoform X1 [Cucumis sativus])

HSP 1 Score: 69.7 bits (169), Expect = 2.1e-08
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 88  TSISFDIPDHVPNLCNECEKLHRHCGVGLRCIYRVLEC 126
           TSISFDIPDHVPN C+ECEK   HCGVGLRCI  VL+C
Sbjct: 200 TSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLDC 237

[Close]
BLAST of CmUC05G097750 vs. ExPASy TrEMBL
Match: A0A5A7TC69 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold708G00470 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 7.1e-10
Identity = 32/38 (84.21%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 88  TSISFDIPDHVPNLCNECEKLHRHCGVGLRCIYRVLEC 126
           TSISFDIPDHVPNLC+ECEK   HCGVGLRCI  VLEC
Sbjct: 127 TSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLEC 164

[Close]
BLAST of CmUC05G097750 vs. ExPASy TrEMBL
Match: A0A1S3CG71 (uncharacterized protein LOC103500362 OS=Cucumis melo OX=3656 GN=LOC103500362 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 7.1e-10
Identity = 32/38 (84.21%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 88  TSISFDIPDHVPNLCNECEKLHRHCGVGLRCIYRVLEC 126
           TSISFDIPDHVPNLC+ECEK   HCGVGLRCI  VLEC
Sbjct: 200 TSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLEC 237

[Close]
BLAST of CmUC05G097750 vs. ExPASy TrEMBL
Match: A0A6J1DHE8 (uncharacterized protein LOC111020512 OS=Momordica charantia OX=3673 GN=LOC111020512 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 3.5e-09
Identity = 31/38 (81.58%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 88  TSISFDIPDHVPNLCNECEKLHRHCGVGLRCIYRVLEC 126
           T+ISFDIPDHVPNLCNEC K   HCGVGLRCI  VLEC
Sbjct: 193 TTISFDIPDHVPNLCNECGKPGGHCGVGLRCICHVLEC 230

[Close]
BLAST of CmUC05G097750 vs. ExPASy TrEMBL
Match: A0A6J1EVX8 (uncharacterized protein LOC111436512 OS=Cucurbita moschata OX=3662 GN=LOC111436512 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.3e-08
Identity = 29/38 (76.32%), Postives = 31/38 (81.58%), Query Frame = 0 

Query: 88  TSISFDIPDHVPNLCNECEKLHRHCGVGLRCIYRVLEC 126
           TSISFDIPDHVPN C ECEK   HCGVGLRC+  V+EC
Sbjct: 187 TSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVEC 224

[Close]
BLAST of CmUC05G097750 vs. ExPASy TrEMBL
Match: A0A6J1I584 (uncharacterized protein LOC111469332 OS=Cucurbita maxima OX=3661 GN=LOC111469332 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.8e-08
Identity = 28/38 (73.68%), Postives = 31/38 (81.58%), Query Frame = 0 

Query: 88  TSISFDIPDHVPNLCNECEKLHRHCGVGLRCIYRVLEC 126
           TSISFDIPDH+PN C ECEK   HCGVGLRC+  V+EC
Sbjct: 187 TSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVEC 224

[Close]
BLAST of CmUC05G097750 vs. TAIR 10
Match: AT3G44716.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 13 Blast hits to 13 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 4.4e-04
Identity = 15/36 (41.67%), Postives = 23/36 (63.89%), Query Frame = 0 

Query: 90  ISFDIPDHVPNLCNECEKLHRHCGVGLRCIYRVLEC 126
           +S ++  H+P+LC  CE+   +CGV LRC+    EC
Sbjct: 75  VSMEVEGHIPDLCIACERPKGNCGVALRCLCHPKEC 110

[Close]
BLAST of CmUC05G097750 vs. TAIR 10
Match: AT3G44716.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 4.4e-04
Identity = 15/36 (41.67%), Postives = 23/36 (63.89%), Query Frame = 0 

Query: 90  ISFDIPDHVPNLCNECEKLHRHCGVGLRCIYRVLEC 126
           +S ++  H+P+LC  CE+   +CGV LRC+    EC
Sbjct: 75  VSMEVEGHIPDLCIACERPKGNCGVALRCLCHPKEC 110

The following BLAST results are available for this feature:
BLAST of CmUC05G097750 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038893879.18.6e-1084.21uncharacterized protein LOC120082681 [Benincasa hispida][more]
KAA0040940.11.5e-0984.21uncharacterized protein E6C27_scaffold125G001350 [Cucumis melo var. makuwa] >TYK... [more]
XP_008461870.11.5e-0984.21PREDICTED: uncharacterized protein LOC103500362 [Cucumis melo][more]
XP_022152889.17.3e-0981.58uncharacterized protein LOC111020512 [Momordica charantia][more]
XP_031736033.12.1e-0878.95uncharacterized protein LOC101222629 isoform X1 [Cucumis sativus][more]
BLAST of CmUC05G097750 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC05G097750 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TC697.1e-1084.21Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CG717.1e-1084.21uncharacterized protein LOC103500362 OS=Cucumis melo OX=3656 GN=LOC103500362 PE=... [more]
A0A6J1DHE83.5e-0981.58uncharacterized protein LOC111020512 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1EVX81.3e-0876.32uncharacterized protein LOC111436512 OS=Cucurbita moschata OX=3662 GN=LOC1114365... [more]
A0A6J1I5841.8e-0873.68uncharacterized protein LOC111469332 OS=Cucurbita maxima OX=3661 GN=LOC111469332... [more]
BLAST of CmUC05G097750 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G44716.14.4e-0441.67unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G44716.24.4e-0441.67unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR33355WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATEDcoord: 78..125
NoneNo IPR availablePANTHERPTHR33355:SF11PROTEIN, PUTATIVE-RELATEDcoord: 78..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC05G097750.1CmUC05G097750.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane