CmUC05G097440 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC05G097440
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	ethylene-responsive transcription factor ERF003-like
Location	CmU531Chr05: 26998583 .. 27001265 (-)
RNA-Seq Expression	CmUC05G097440
Synteny	CmUC05G097440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTGTGCTTCTTGGTCTTGAAATACCATATCTTAGTGCAACTGGTGCACTTATGTATCTTCCTAATAATACGAGATCAAATATTGCATTTTCAGTAAATTTATTAGCTAGATACAATTCTTCTCCAGCAGAAAGGCATTGGAATAGAATTAAGTATATACTCCGTTATCTCCGAGGAACAATCGATATGAGTTTGTTTTATTCAAATAAATCGAAATTTGATCTACTTGGTTATGCAAATTCTAGATACTTATCTGATTCACACAAAGCTAGGTCTCAAACAGGTTATTTGTTCACACCTGGAGGAACCGTTATATCATGGCGTGTTATATCATGGTGTTTAGTGAAACAAACCATAACAACCATTTCCTCAAACCATGTTGAAATTCTTACAATCTTAATATTAATATTAAAAAAAAACCTTTTAATTTACAACTTACAAATGATATTTTACTCTTCCAATAAACCTCGAGATAGATATAAAATGATAGGCTTTCACATGTTTAATACAATGCATAGCTCCACATAATAGAATTAGACCGTTTGGTATAAATATATTTCCTATTATATTAGTAACAAACAAAATATTTTCACCAAATTGACTCATTATTTTAAATTTAACACATACTATGTATATGAATGGACCAAATAAGGTAAGAACGCTTCAAAACCTACTTGAAAATGCAGTTACAATAACACCCTAATCAATCCAAAATAAGTTAGAATCTTTCACGTGAAAAATAAAGATATGGAATGATGAGCTCTACACGCCATGCGTGATAATACTTAAGCTTTAAAATAATTAAAACACAAACATGATTAAAATCATCCCCAAACATTCCATTCAAGAGATTTGAGTATGTGTGATTAGTGAGAGAAAGAATTGATTAAGTAAAATATTTTATCAAAAAGATTTGGATGGTTGGATTGATGAATTATTAACTTCTGAAGAGGTTGATATTCTAATGATTTGTATGAATGAAAAGGAATATTCACTCAATCATATTGACACAAAAAACTAGTCACATTTTCTTAAACTTTGACACTCAAAATCACATGAAAATATGAATTTAAAATCATACAAATAAATAAACTATACACCCAAATTGATGGTTAAAAAAAAAAAGAAAAAAAAAGAAAGAAAAAAACATATATTTATTACAAATTCAAGACATGTGAAGTGATTTTCTTTTTGGGTCAGTTTCAAACTTCAACTTACCTCTTTTTTCTAGTAATCTCCACTCTCAAATGCTCAACAACCAATTGGTTGGGCAATTGGTGAAAGAAAAGAAATTTGGGTACTGCATCTCCAAATCCCCTTATCTTTTTATCTTTTTTTAATCCAGTTAATTGTTTAATTATAATTTGTCTCAAACAAAATTTTGTCCTTTTTTTTATATATGTATATTTTAATGATTAAGTTAAGAGGCAAGGAGATGTGTGATCATTCAAGTATTATTTTCTTTTGGAGAAATTATTTTGATAAAGTTGCTAGCTTACTACGGTATAATTGACTATTTTTCACCGTAAGATGTAGAGAAACAAGTGTCTCAAGTTTTTATCTAGTGGTTATTAAAAAATAAACATATTATTAAGTTCACATCTAACAATTTTTATAAGACAACTAGTAGATATCAATTATGACAGTCTCGTTAAATAACTTTTCAAACTATTGGACAAGGCAAAAATAAAAATAATTCAGTTAAATTATATAGTCTCTATACTTTTAAAAAAAATTTAGAATTTAGTCGAGCTAAATTCTAATTTTCTCCGAATGAAAATTACTACTTTAAATTATTTTTTTTCAAAATATAGGAATTTAATCAAATATTCCACACAAATCCGTGAGACCCCACTAAATATCAAATTGGTTGCCAGAAAGGCTTCACAAAACTGGCTCCGCGATTGCCGTCTTTGTCAGAGTGATCAAATATAAAACACCCATTTTTCTTGCTCGCAAACTACCAATTTTTGTTCTCTGTTTTTGTTTCAGGCATTTTCACAAACACCTTGTGGATTACAAAGAGTTATGCCATGGCCAGACCGCAAAAGCGCTACCGTGGTGTAAGACAAAGGCATTGGGGCTCTTGGGTTTCTGAAATTCGTCATCCTTTATTGTAACTCTCTTTCATTTTCTCAATCTTCTTCGATAATTTTTCTTTAAAACTCAAAATCGACTCTGTTGTTTTCTTAACAGGAAAACAAGAATTTGGCTGGGAACATTTGAAACCGCGGAAGATGCTGCGAGAGCTTATGATGAAGCTGCAAGATTAATGTGTGGCCCAAAAGCAAGAACGAATTTTCCATACAATCCAAATGCAATACAATCCTCGAATTCGAGGATTTTATCGGCTAACTTGACTGCGAAATTGCATAGGTGTTATATGGCTTCTTTGCAGATTAGTAACCAAGCTTCAGGGGAGTTTAAAAGAGACATTCCGGCGGTATTTCCGGCATCAACGCCGCTACCTCATGCGGTTGTTGGCTCCGGTGTGGCCAGTTCGGCGGTGGAGGAGATTGGACCGGCGGCGGAGCAAGGGCCATGTGCGGCGGATTGGATGGTGAGAAGTGTGAAAATGGAAAGTGAATTTGGGGAGTTGAAATTGTTGGAAGATGATCACATTGAGCAAATGATTGAGGAACTTCTTTATTATGGATCCATGGAGTTTTGTCTGTGA

mRNA sequence

ATGGAAGTTGTGCTTCTTGGTCTTGAAATACCATATCTTAGTGCAACTGGTGCACTTATGTATCTTCCTAATAATACGAGATCAAATATTGCATTTTCAGTAAATTTATTAGCTAGATACAATTCTTCTCCAGCAGAAAGGCATTGGAATAGAATTAAGTATATACTCCGTTATCTCCGAGGAACAATCGATATGAGTTTGTTTTATTCAAATAAATCGAAATTTGATCTACTTGGTTATGCAAATTCTAGATACTTATCTGATTCACACAAAGCTAGGTCTCAAACAGGCATTTTCACAAACACCTTGTGGATTACAAAGAGTTATGCCATGGCCAGACCGCAAAAGCGCTACCGTGGTGTAAGACAAAGGCATTGGGGCTCTTGGGTTTCTGAAATTCGTCATCCTTTATTGAAAACAAGAATTTGGCTGGGAACATTTGAAACCGCGGAAGATGCTGCGAGAGCTTATGATGAAGCTGCAAGATTAATGTGTGGCCCAAAAGCAAGAACGAATTTTCCATACAATCCAAATGCAATACAATCCTCGAATTCGAGGATTTTATCGGCTAACTTGACTGCGAAATTGCATAGGTGTTATATGGCTTCTTTGCAGATTAGTAACCAAGCTTCAGGGGAGTTTAAAAGAGACATTCCGGCGGTATTTCCGGCATCAACGCCGCTACCTCATGCGGTTGTTGGCTCCGGTGTGGCCAGTTCGGCGGTGGAGGAGATTGGACCGGCGGCGGAGCAAGGGCCATGTGCGGCGGATTGGATGGTGAGAAGTGTGAAAATGGAAAGTGAATTTGGGGAGTTGAAATTGTTGGAAGATGATCACATTGAGCAAATGATTGAGGAACTTCTTTATTATGGATCCATGGAGTTTTGTCTGTGA

Coding sequence (CDS)

ATGGAAGTTGTGCTTCTTGGTCTTGAAATACCATATCTTAGTGCAACTGGTGCACTTATGTATCTTCCTAATAATACGAGATCAAATATTGCATTTTCAGTAAATTTATTAGCTAGATACAATTCTTCTCCAGCAGAAAGGCATTGGAATAGAATTAAGTATATACTCCGTTATCTCCGAGGAACAATCGATATGAGTTTGTTTTATTCAAATAAATCGAAATTTGATCTACTTGGTTATGCAAATTCTAGATACTTATCTGATTCACACAAAGCTAGGTCTCAAACAGGCATTTTCACAAACACCTTGTGGATTACAAAGAGTTATGCCATGGCCAGACCGCAAAAGCGCTACCGTGGTGTAAGACAAAGGCATTGGGGCTCTTGGGTTTCTGAAATTCGTCATCCTTTATTGAAAACAAGAATTTGGCTGGGAACATTTGAAACCGCGGAAGATGCTGCGAGAGCTTATGATGAAGCTGCAAGATTAATGTGTGGCCCAAAAGCAAGAACGAATTTTCCATACAATCCAAATGCAATACAATCCTCGAATTCGAGGATTTTATCGGCTAACTTGACTGCGAAATTGCATAGGTGTTATATGGCTTCTTTGCAGATTAGTAACCAAGCTTCAGGGGAGTTTAAAAGAGACATTCCGGCGGTATTTCCGGCATCAACGCCGCTACCTCATGCGGTTGTTGGCTCCGGTGTGGCCAGTTCGGCGGTGGAGGAGATTGGACCGGCGGCGGAGCAAGGGCCATGTGCGGCGGATTGGATGGTGAGAAGTGTGAAAATGGAAAGTGAATTTGGGGAGTTGAAATTGTTGGAAGATGATCACATTGAGCAAATGATTGAGGAACTTCTTTATTATGGATCCATGGAGTTTTGTCTGTGA

Protein sequence

MEVVLLGLEIPYLSATGALMYLPNNTRSNIAFSVNLLARYNSSPAERHWNRIKYILRYLRGTIDMSLFYSNKSKFDLLGYANSRYLSDSHKARSQTGIFTNTLWITKSYAMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYNPNAIQSSNSRILSANLTAKLHRCYMASLQISNQASGEFKRDIPAVFPASTPLPHAVVGSGVASSAVEEIGPAAEQGPCAADWMVRSVKMESEFGELKLLEDDHIEQMIEELLYYGSMEFCL

Homology

[Close]

BLAST of CmUC05G097440 vs. NCBI nr
Match: XP_038899563.1 (ethylene-responsive transcription factor ERF003-like [Benincasa hispida])

HSP 1 Score: 334.7 bits (857), Expect = 8.0e-88
Identity = 167/188 (88.83%), Postives = 171/188 (90.96%), Query Frame = 0


Query: 110 AMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKA 169
           AMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKA
Sbjct: 41  AMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKA 100

Query: 170 RTNFPYNPNAIQSSNSRILSANLTAKLHRCYMASLQISNQASGEFKRDIPAVFPASTPLP 229
           RTNFP+NPNAIQSS+SRILSANLTAKLHRCYMASLQISNQ SGEFKRD+ A FP   PLP
Sbjct: 101 RTNFPFNPNAIQSSSSRILSANLTAKLHRCYMASLQISNQVSGEFKRDVTAPFPEPAPLP 160

Query: 230 HAVVGSGVASSAVEEIGPAAEQGPCAADWMVRSVKMESEFGELKLLEDDHIEQMIEELLY 289
                 GVASS VEEIG   EQGPCAADWMVRSVK+ESEFGELKLLEDDHIEQMIEEL Y
Sbjct: 161 ----CGGVASSVVEEIGTLVEQGPCAADWMVRSVKIESEFGELKLLEDDHIEQMIEELRY 220

Query: 290 YGSMEFCL 298
           YGSMEFCL
Sbjct: 221 YGSMEFCL 224

[Close]

BLAST of CmUC05G097440 vs. NCBI nr
Match: XP_011654234.1 (ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KAE8649946.1 hypothetical protein Csa_012743 [Cucumis sativus])

HSP 1 Score: 327.4 bits (838), Expect = 1.3e-85
Identity = 167/203 (82.27%), Postives = 173/203 (85.22%), Query Frame = 0


Query: 98  IFTNTLW---ITKSYAMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAA 157
           IFTNT W   I  SYAMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAA
Sbjct: 27  IFTNTFWEEEIQPSYAMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAA 86

Query: 158 RAYDEAARLMCGPKARTNFPYNPNAIQSSNSRILSANLTAKLHRCYMASLQISNQASGEF 217
           RAYDEAARLMCGPKARTNFPY+P+AIQSSNSRILS+NLTAKLHRCYMASL+ISNQ S EF
Sbjct: 87  RAYDEAARLMCGPKARTNFPYSPSAIQSSNSRILSSNLTAKLHRCYMASLEISNQGSAEF 146

Query: 218 KRDIPAVFPASTPLPHAVVGSGVASSAVEEIGPAAEQGPCAADWMVRSVKMESEFGELKL 277
           K DI A FPA              SS VEEI PA E+ PCAADWMVRSVK+ESEFGELKL
Sbjct: 147 KSDITAAFPAPAS----------TSSVVEEIIPAVEEVPCAADWMVRSVKIESEFGELKL 206

Query: 278 LEDDHIEQMIEELLYYGSMEFCL 298
           LEDDHIEQMIEEL YYGSMEFCL
Sbjct: 207 LEDDHIEQMIEELRYYGSMEFCL 219

[Close]

BLAST of CmUC05G097440 vs. NCBI nr
Match: XP_008452875.1 (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo])

HSP 1 Score: 320.9 bits (821), Expect = 1.2e-83
Identity = 164/194 (84.54%), Postives = 170/194 (87.63%), Query Frame = 0


Query: 105 ITKSYAMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLM 164
           I  SYAMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLM
Sbjct: 16  IQTSYAMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLM 75

Query: 165 CGPKARTNFPYNPNAIQSSNSRILSANLTAKLHRCYMASLQISNQASG-EFKRDIPAVFP 224
           CGPKARTNFPY+ +AIQSSNSRILS+NLTAKLHRCYMASLQISNQ SG EFKRDI + FP
Sbjct: 76  CGPKARTNFPYSSSAIQSSNSRILSSNLTAKLHRCYMASLQISNQGSGEEFKRDITSAFP 135

Query: 225 ASTPLPHAVVGSGVASSAVEEIGPAAEQGPCAADWMVRSVKMESEFGELKLLEDDHIEQM 284
           A              SS VE+I PAAE+GPCAADWMVRSVKMESEFGELKLLEDDHIEQM
Sbjct: 136 APAS----------TSSVVEDIIPAAEEGPCAADWMVRSVKMESEFGELKLLEDDHIEQM 195

Query: 285 IEELLYYGSMEFCL 298
           IEEL YYGSMEFCL
Sbjct: 196 IEELRYYGSMEFCL 199

[Close]

BLAST of CmUC05G097440 vs. NCBI nr
Match: KAG7031771.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 252.7 bits (644), Expect = 4.0e-63
Identity = 135/187 (72.19%), Postives = 145/187 (77.54%), Query Frame = 0


Query: 111 MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 170
           MARPQ++YRGVRQRHWGSWVSEIRHP LKTRIWLGTFETAEDAARAYDEAARLMCGP AR
Sbjct: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60

Query: 171 TNFPYNPNAIQSSNSRILSANLTAKLHRCYMASLQISNQASGEFKRDIPAVFPASTPLPH 230
           TNFPYNPN IQSSNS+ILSANLTAKLHRCYMASLQISNQ   EFKR++P  F A++    
Sbjct: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQ---EFKRELPPPFAAAS---- 120

Query: 231 AVVGSGVASSAVEEIGPAAEQGPCAADWMVRSVKMESEFGELKLLEDDHIEQMIEELLYY 290
               +  A S VEE  P A +               +E  ELKLLEDDHIEQMIEELLYY
Sbjct: 121 ---YADAARSMVEENRPTAPEA--------------AEQEELKLLEDDHIEQMIEELLYY 163

Query: 291 GSMEFCL 298
           GSMEFCL
Sbjct: 181 GSMEFCL 163

[Close]

BLAST of CmUC05G097440 vs. NCBI nr
Match: KAG6608134.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 250.8 bits (639), Expect = 1.5e-62
Identity = 134/187 (71.66%), Postives = 144/187 (77.01%), Query Frame = 0


Query: 111 MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 170
           MARPQ++YRGVRQRHWGSWVSEIRHP L TRIWLGTFETAEDAARAYDEAARLMCGP AR
Sbjct: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLSTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60

Query: 171 TNFPYNPNAIQSSNSRILSANLTAKLHRCYMASLQISNQASGEFKRDIPAVFPASTPLPH 230
           TNFPYNPN IQSSNS+ILSANLTAKLHRCYMASLQISNQ   EFKR++P  F A++    
Sbjct: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQ---EFKRELPPPFAAAS---- 120

Query: 231 AVVGSGVASSAVEEIGPAAEQGPCAADWMVRSVKMESEFGELKLLEDDHIEQMIEELLYY 290
               +  A S VEE  P A +               +E  ELKLLEDDHIEQMIEELLYY
Sbjct: 121 ---YADAARSMVEENRPTAPEA--------------AEQEELKLLEDDHIEQMIEELLYY 163

Query: 291 GSMEFCL 298
           GSMEFCL
Sbjct: 181 GSMEFCL 163

[Close]

BLAST of CmUC05G097440 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.3e-53
Identity = 111/186 (59.68%), Postives = 132/186 (70.97%), Query Frame = 0


Query: 111 MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 170
           MARPQ+R+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 171 TNFPYNPNAIQSSNSRILSANLTAKLHRCYMASLQISNQASGEFKRDIPAVFPASTPLPH 230
           TNFPYNPNAI +S+S++LSA LTAKLH+CYMASLQ++ Q   + +          T    
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQ--------TQTARSQ 120

Query: 231 AVVGSGVASSAVEEIGPAAEQGPCAADWMVRSVKMESEFGELKLLEDDHIEQMIEELLYY 290
           +    GV ++         E       W   +  M+  F   + LE+DHIEQMIEELL+Y
Sbjct: 121 SADSDGVTANESHLNRGVTE--TTEIKWEDGNANMQQNF---RPLEEDHIEQMIEELLHY 173

Query: 291 GSMEFC 297
           GS+E C
Sbjct: 181 GSIELC 173

[Close]

BLAST of CmUC05G097440 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 5.6e-44
Identity = 101/181 (55.80%), Postives = 122/181 (67.40%), Query Frame = 0


Query: 111 MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 170
           MARPQ+RYRG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYDEAARLMCG +AR
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 171 TNFPYNPNAIQSSNSRILSANLTAKLHRCYMASLQISNQASGEFKRDIPAVFPASTPLPH 230
           TNFPYNPNA QSS+S++LSA L AKLHRCYMASLQ++               P+S P   
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLIAKLHRCYMASLQMTR--------------PSSLPEAP 120

Query: 231 AVVGSGVASSAVEEIGPAA---------EQGPCAADWMVRSVKMESEFGELKLLEDDHIE 283
            ++ S   ++AV+ IG  A         E+     +   + VK+E    + K LE+DHI 
Sbjct: 121 RIIAS--PNNAVKGIGADAMLLPKKREQEEQETGGNLDFKKVKVECS-QQFKPLEEDHIA 164

[Close]

BLAST of CmUC05G097440 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.9e-24
Identity = 82/198 (41.41%), Postives = 109/198 (55.05%), Query Frame = 0


Query: 116 KRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 175
           K++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 176 NPN-----------------AIQSSNSRILSANLTAKLHRC------YMASLQISNQAS- 235
           N N                    S++S  LS+ L+AKL +C       +  L++   +S 
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTASSH 124

Query: 236 -GEFKRDIPAVFPASTPLPHAVVGSGVASSAVEEIGPAAEQGPCAADWMVRSVKMESEFG 289
            G +++   +   +S  +    V  G ASS+ E    A++    A       V++     
Sbjct: 125 IGVWQKRAGSKSDSSWVM---TVELGPASSSQETTSKASQDAILAP---TTEVEIGGSRE 184

[Close]

BLAST of CmUC05G097440 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.3e-21
Identity = 78/192 (40.62%), Postives = 108/192 (56.25%), Query Frame = 0


Query: 116 KRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 175
           K++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 176 ----NPNAIQSSNS----RILSANLTAKLHR-C-----YMASLQISNQAS--GEFKRDIP 235
                 N+++ +++    + LS  L AKL + C     Y+  L++ N +S  G +++   
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKR-- 124

Query: 236 AVFPASTPLPHAVVGSGVASSAVE--EIGPAAEQGPCAADWMVRSVKMESEFGELKLLED 289
                         GS  + + V+  E+G      P   D     +K+ +E     + ED
Sbjct: 125 -------------AGSKTSPNWVKLVELGDKVNARP-GGDIETNKMKVRNE----DVQED 176

[Close]

BLAST of CmUC05G097440 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.7e-21
Identity = 50/86 (58.14%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 116 KRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 175
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 176 -----NPNAIQSSNSRILSANLTAKL 197
                  + ++  NS ++S    ++L
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSEL 90

[Close]

BLAST of CmUC05G097440 vs. ExPASy TrEMBL
Match: A0A1S3BUB9 (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103493770 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 5.8e-84
Identity = 164/194 (84.54%), Postives = 170/194 (87.63%), Query Frame = 0


Query: 105 ITKSYAMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLM 164
           I  SYAMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLM
Sbjct: 16  IQTSYAMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLM 75

Query: 165 CGPKARTNFPYNPNAIQSSNSRILSANLTAKLHRCYMASLQISNQASG-EFKRDIPAVFP 224
           CGPKARTNFPY+ +AIQSSNSRILS+NLTAKLHRCYMASLQISNQ SG EFKRDI + FP
Sbjct: 76  CGPKARTNFPYSSSAIQSSNSRILSSNLTAKLHRCYMASLQISNQGSGEEFKRDITSAFP 135

Query: 225 ASTPLPHAVVGSGVASSAVEEIGPAAEQGPCAADWMVRSVKMESEFGELKLLEDDHIEQM 284
           A              SS VE+I PAAE+GPCAADWMVRSVKMESEFGELKLLEDDHIEQM
Sbjct: 136 APAS----------TSSVVEDIIPAAEEGPCAADWMVRSVKMESEFGELKLLEDDHIEQM 195

Query: 285 IEELLYYGSMEFCL 298
           IEEL YYGSMEFCL
Sbjct: 196 IEELRYYGSMEFCL 199

[Close]

BLAST of CmUC05G097440 vs. ExPASy TrEMBL
Match: A0A0A0L5N2 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G652640 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.9e-83
Identity = 161/193 (83.42%), Postives = 167/193 (86.53%), Query Frame = 0


Query: 105 ITKSYAMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLM 164
           I  SYAMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLM
Sbjct: 21  IQPSYAMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLM 80

Query: 165 CGPKARTNFPYNPNAIQSSNSRILSANLTAKLHRCYMASLQISNQASGEFKRDIPAVFPA 224
           CGPKARTNFPY+P+AIQSSNSRILS+NLTAKLHRCYMASL+ISNQ S EFK DI A FPA
Sbjct: 81  CGPKARTNFPYSPSAIQSSNSRILSSNLTAKLHRCYMASLEISNQGSAEFKSDITAAFPA 140

Query: 225 STPLPHAVVGSGVASSAVEEIGPAAEQGPCAADWMVRSVKMESEFGELKLLEDDHIEQMI 284
                         SS VEEI PA E+ PCAADWMVRSVK+ESEFGELKLLEDDHIEQMI
Sbjct: 141 PAS----------TSSVVEEIIPAVEEVPCAADWMVRSVKIESEFGELKLLEDDHIEQMI 200

Query: 285 EELLYYGSMEFCL 298
           EEL YYGSMEFCL
Sbjct: 201 EELRYYGSMEFCL 203

[Close]

BLAST of CmUC05G097440 vs. ExPASy TrEMBL
Match: A0A6J1IVF7 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111480324 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 2.8e-62
Identity = 133/187 (71.12%), Postives = 143/187 (76.47%), Query Frame = 0


Query: 111 MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 170
           MARPQ++YRGVRQRHWGSWVSEIRHP LKTRIWLGTFETAEDAARAYDEAARLMCGP AR
Sbjct: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60

Query: 171 TNFPYNPNAIQSSNSRILSANLTAKLHRCYMASLQISNQASGEFKRDIPAVFPASTPLPH 230
           TNFPYNPN IQSSNS+ILSANLTAKLHRCYMASLQISNQ   EFKR++P  F  ++    
Sbjct: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQ---EFKRELPPPFATAS---- 120

Query: 231 AVVGSGVASSAVEEIGPAAEQGPCAADWMVRSVKMESEFGELKLLEDDHIEQMIEELLYY 290
               +  A S VEE  P A +               +E  E KLLEDDHIEQMIEELLYY
Sbjct: 121 ---YADAARSMVEENRPTAAEA--------------AEQEEQKLLEDDHIEQMIEELLYY 163

Query: 291 GSMEFCL 298
           GSMEFCL
Sbjct: 181 GSMEFCL 163

[Close]

BLAST of CmUC05G097440 vs. ExPASy TrEMBL
Match: A0A6J1CHC9 (ethylene-responsive transcription factor ERF003-like OS=Momordica charantia OX=3673 GN=LOC111010874 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.2e-60
Identity = 132/187 (70.59%), Postives = 142/187 (75.94%), Query Frame = 0


Query: 110 AMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKA 169
           AMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKA
Sbjct: 51  AMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKA 110

Query: 170 RTNFPYNPNAIQSSNSRILSANLTAKLHRCYMASLQISNQASGEFKRDIPAVFPASTPLP 229
           RTNF YNPN +Q    ++LSANLTAKLHRCY+ASLQI +Q    F+R+  A   A  P P
Sbjct: 111 RTNFAYNPNGVQC--CKLLSANLTAKLHRCYVASLQIGSQGPRGFRREHLA---APAPAP 170

Query: 230 HAVVGSGVASSAVEEIGPAAEQGPCAADWMVRSVKMESEFGELKLLEDDHIEQMIEELLY 289
             V+                EQ P AA    R+VK ESE GELK+LEDDHIEQMIEELLY
Sbjct: 171 VVVM---------------EEQPPYAAG---RNVKRESECGELKVLEDDHIEQMIEELLY 214

Query: 290 YGSMEFC 297
           YGSMEFC
Sbjct: 231 YGSMEFC 214

[Close]

BLAST of CmUC05G097440 vs. ExPASy TrEMBL
Match: D5L105 (AP2 domain class transcription factor OS=Malus domestica OX=3750 GN=AP2D21 PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 4.5e-60
Identity = 124/186 (66.67%), Postives = 142/186 (76.34%), Query Frame = 0


Query: 111 MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 170
           MARPQ+RYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 171 TNFPYNPNAIQSSNSRILSANLTAKLHRCYMASLQISNQASGEFKRDIPAVFPASTPLPH 230
           TNFPYNPNA QSS S++LSA LTAKLHRCYMASLQ++  +  E K+            P 
Sbjct: 61  TNFPYNPNASQSSASKLLSATLTAKLHRCYMASLQMTKTSLQEPKK------------PQ 120

Query: 231 AVVGSGVASSAVEEIGPAAEQGPCAADWMVRSVKMESEFGELKLLEDDHIEQMIEELLYY 290
           A+  SG   + + +I P   Q     +W+VR VK+ES   + K LEDDHIEQMIEELL+Y
Sbjct: 121 ALASSG---AKMPDIKPEIHQPVAEENWVVREVKVESSSQQFKPLEDDHIEQMIEELLHY 171

Query: 291 GSMEFC 297
           GS+E C
Sbjct: 181 GSIELC 171

[Close]

BLAST of CmUC05G097440 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 211.5 bits (537), Expect = 9.5e-55
Identity = 111/186 (59.68%), Postives = 132/186 (70.97%), Query Frame = 0


Query: 111 MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 170
           MARPQ+R+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 171 TNFPYNPNAIQSSNSRILSANLTAKLHRCYMASLQISNQASGEFKRDIPAVFPASTPLPH 230
           TNFPYNPNAI +S+S++LSA LTAKLH+CYMASLQ++ Q   + +          T    
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQ--------TQTARSQ 120

Query: 231 AVVGSGVASSAVEEIGPAAEQGPCAADWMVRSVKMESEFGELKLLEDDHIEQMIEELLYY 290
           +    GV ++         E       W   +  M+  F   + LE+DHIEQMIEELL+Y
Sbjct: 121 SADSDGVTANESHLNRGVTE--TTEIKWEDGNANMQQNF---RPLEEDHIEQMIEELLHY 173

Query: 291 GSMEFC 297
           GS+E C
Sbjct: 181 GSIELC 173

[Close]

BLAST of CmUC05G097440 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 2.1e-25
Identity = 82/198 (41.41%), Postives = 109/198 (55.05%), Query Frame = 0


Query: 116 KRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 175
           K++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 176 NPN-----------------AIQSSNSRILSANLTAKLHRC------YMASLQISNQAS- 235
           N N                    S++S  LS+ L+AKL +C       +  L++   +S 
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTASSH 124

Query: 236 -GEFKRDIPAVFPASTPLPHAVVGSGVASSAVEEIGPAAEQGPCAADWMVRSVKMESEFG 289
            G +++   +   +S  +    V  G ASS+ E    A++    A       V++     
Sbjct: 125 IGVWQKRAGSKSDSSWVM---TVELGPASSSQETTSKASQDAILAP---TTEVEIGGSRE 184

[Close]

BLAST of CmUC05G097440 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 1.6e-22
Identity = 78/192 (40.62%), Postives = 108/192 (56.25%), Query Frame = 0


Query: 116 KRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 175
           K++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 176 ----NPNAIQSSNS----RILSANLTAKLHR-C-----YMASLQISNQAS--GEFKRDIP 235
                 N+++ +++    + LS  L AKL + C     Y+  L++ N +S  G +++   
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKR-- 124

Query: 236 AVFPASTPLPHAVVGSGVASSAVE--EIGPAAEQGPCAADWMVRSVKMESEFGELKLLED 289
                         GS  + + V+  E+G      P   D     +K+ +E     + ED
Sbjct: 125 -------------AGSKTSPNWVKLVELGDKVNARP-GGDIETNKMKVRNE----DVQED 176

[Close]

BLAST of CmUC05G097440 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 102.8 bits (255), Expect = 4.8e-22
Identity = 50/86 (58.14%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 116 KRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 175
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 176 -----NPNAIQSSNSRILSANLTAKL 197
                  + ++  NS ++S    ++L
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSEL 90

[Close]

BLAST of CmUC05G097440 vs. TAIR 10
Match: AT4G13620.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 3.4e-20
Identity = 51/99 (51.52%), Postives = 68/99 (68.69%), Query Frame = 0


Query: 114 PQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF 173
           P K YRGVRQRHWG WV+EIR P  +TR+WLGTFETAE AA AYD AA ++ G  A  NF
Sbjct: 228 PTKLYRGVRQRHWGKWVAEIRLPRNRTRVWLGTFETAEQAAMAYDTAAYILRGEFAHLNF 287

Query: 174 PYNPNAIQSSNSRILSAN-LTAKLHRCYMASLQISNQAS 212
           P   + ++S + R + A+ L +K+ +  ++S Q+SN  S
Sbjct: 288 PDLKHQLKSGSLRCMIASLLESKIQQ--ISSSQVSNSPS 324

The following BLAST results are available for this feature:

BLAST of CmUC05G097440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899563.1	8.0e-88	88.83	ethylene-responsive transcription factor ERF003-like [Benincasa hispida]	[more]
XP_011654234.1	1.3e-85	82.27	ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KAE8649946.1 ...	[more]
XP_008452875.1	1.2e-83	84.54	PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo]	[more]
KAG7031771.1	4.0e-63	72.19	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
KAG6608134.1	1.5e-62	71.66	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of CmUC05G097440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AW5	1.3e-53	59.68	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	5.6e-44	55.80	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]
Q9XI33	2.9e-24	41.41	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q3E958	2.3e-21	40.63	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LFN7	6.7e-21	58.14	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of CmUC05G097440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BUB9	5.8e-84	84.54	ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0L5N2	2.9e-83	83.42	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G652640 PE=...	[more]
A0A6J1IVF7	2.8e-62	71.12	ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1CHC9	1.2e-60	70.59	ethylene-responsive transcription factor ERF003-like OS=Momordica charantia OX=3...	[more]
D5L105	4.5e-60	66.67	AP2 domain class transcription factor OS=Malus domestica OX=3750 GN=AP2D21 PE=2 ...	[more]

BLAST of CmUC05G097440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25190.1	9.5e-55	59.68	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	2.1e-25	41.41	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	1.6e-22	40.63	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	4.8e-22	58.14	Integrase-type DNA-binding superfamily protein	[more]
AT4G13620.1	3.4e-20	51.52	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 118..129 score: 66.97 coord: 140..156 score: 70.91
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 117..180 e-value: 1.7E-40 score: 150.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 117..166 e-value: 1.5E-11 score: 44.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 117..174 score: 21.126986
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 116..176 e-value: 5.1006E-34 score: 116.602
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 116..175 e-value: 2.4E-26 score: 93.6
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 111..296
None	No IPR available	PANTHER	PTHR31194:SF112	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003	coord: 111..296
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 117..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC05G097440.1	CmUC05G097440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity