![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CmUC05G096120 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGTGCGAGCTGTGTGGGCAGCAAGCGAGGATGTTCTGTGAGTCGGATCAGGCGAACCTATGTTGGGACTGCGACGAGAAGGTTCACTGTGCAAATTTTCTTGTTGCTAAACATTCTCGGAGCCTTCTTTGTCATGTATGCCAGTCTCCGACTCCATGGGCTGCCTCTGGTCGGAAGCTTACGCCGACGGTTTCTGTGTGCGAGGGGTGTGTCGATGTCCATGGTGGTAAATGCGAGCAAGGTGGATTTCAAGAGCGGCGTAGAGATAACGAGGAGGAAGTTGATGGTGGTGATGATTTTGACGATGGTGAAGGTTTCGATAGTTATGAGGGAGGTGATAGTGAGGAAGACGATGATGGGGATGAAGATGAGGACGAGGAGGAAGAGGATGAGGACGGAGAAAACCAGGTGGTGCCCTGGTCTTATGCATCTTCTTCGTCTCCACCACCGCCTCCGACAGTAACTTCTAGCAGCGAGGGCGAGATTTCAGCCGGCGCTGGTGTCGCATCGAAGCGGATGAGAGAATACGGCATCGATCTCGATTCCGATGTATGTACTTTTTAGGTTTTGTTTTCTTGCTATTGCCTTCTCTTCCGTGTTTTCCTTTTTTCCTGAGTCTGTGCTGAAGGAAATCATTCGGGATTTCGGAATCTTTTGTTCTTTCATTCGCTTTTCTGGAACCGGTGTTTTGACAAAATCATATCGTTTTTCTCACACAACAAAAATCAATGGTTTTCACTTCTCCAAGTGAATCTGACACAAGATTTGAACCGAATCGTTCTGTTTTATAATCTTCTTAACCTATGATTTCAATACGAATCGTTTTAATATGCCGATCTGAAACATAATCATCATTTTCCTAGTTCTTAATTTTCCAGTGATCCAAACTGGGTTTTTAGTAATCGTTTCACTTGAATGCAGGATGAAATCGAGTGTTCTTCTGCACCACAGAGTACAAGGCCATTTTTCAATGACGAAGCGACTTCCTCGAGTTCCCTTAGGCCACTGAAGCAAGCAAGAGTTACAGGACCGACCCAATCAGCCACATCCACTCCGGATGTTGAAGCTTGTAAAGCCGAGTTAAAATCCACGGCTGTCGTTAGATCTATCCAGAGACTCCAGAATCGTCTTCCCACCGACATTAACGATGCTTCCAAAATGATCTTTGGGATACGCAAAATGAGCAGAGATCAGAATCGTTGATTCTTCACTAACCACACAATGGAAGGTAGCTAGGGTTCTTAATTTTTTTTTTTCCTTTTTGGGGTTCATTTTTCTCACTAATTGTCTGTCATGATCGATTAATTCAAGGATTATACCTGTTTTCTCAAGTGTGTACAACCTAGAATTTCCCCCTCTATTTTCCATTAGGTAATCTTGTCATCATTTGTGAATCCTGTCAAGTGTAGCCAGATATTAATTTACCCAACTACATTCTATTAACAGATCTCTCTCTACACTTTATGAGTGTTTTCTTGATGCAATATCTCAATCAATATTACATAGTTGTTTAAAAGAGAGATTCTCACATTCTAGTTGTTGTGTTTATGTGGGTCTACGATGACCAGGAGAGATGTATTCAATAAAATATGTATTAATCCATATCCCCCATATCTCTTTTGGGAGCCATCGTCATCTTCTCCCACAACATTTTTAGGTCCACGAAGCCGCTTTTTGGGGTTTTTGCATATTGAAGATGATACCCAACACCCAATACCGAACTGAAGGTAATCATATATCTTGATATTATTTAATGTTCTTGAATCCTCATGCTGGAGCTGTATATGATTAAAATAGTAAGATCATGGCCGACCTTATGTTGGATGGAATCTCCCATGTTCATATTGAACTCCTAGCTACATACATACATATATGTATAAATTTCAGAAAGTATTTATAGATTGTCTATGTTTACTCTTCAAATCTAGCTAGGGTTTTTGATTAAGAATGGTCTTTTTGATTTGCCAATTCCTGTTAAGGTCAAATTGATGTGTATATGGATTATTGAGTGGTTCACATTTTCTCACTGTTTAGACTTCTCTGTTCATAACCATGACTACATTCAGGCCATGGGTTGA ATGAAGAAGTGCGAGCTGTGTGGGCAGCAAGCGAGGATGTTCTGTGAGTCGGATCAGGCGAACCTATGTTGGGACTGCGACGAGAAGGTTCACTGTGCAAATTTTCTTGTTGCTAAACATTCTCGGAGCCTTCTTTGTCATGTATGCCAGTCTCCGACTCCATGGGCTGCCTCTGGTCGGAAGCTTACGCCGACGGTTTCTGTGTGCGAGGGGTGTGTCGATGTCCATGGTGGTAAATGCGAGCAAGGTGGATTTCAAGAGCGGCGTAGAGATAACGAGGAGGAAGTTGATGGTGGTGATGATTTTGACGATGGTGAAGGTTTCGATAGTTATGAGGGAGGTGATAGTGAGGAAGACGATGATGGGGATGAAGATGAGGACGAGGAGGAAGAGGATGAGGACGGAGAAAACCAGGTGGTGCCCTGGTCTTATGCATCTTCTTCGTCTCCACCACCGCCTCCGACAGTAACTTCTAGCAGCGAGGGCGAGATTTCAGCCGGCGCTGGTGTCGCATCGAAGCGGATGAGAGAATACGGCATCGATCTCGATTCCGATGATGAAATCGAGTGTTCTTCTGCACCACAGAGTACAAGGCCATTTTTCAATGACGAAGCGACTTCCTCGAGTTCCCTTAGGCCACTGAAGCAAGCAAGAGTTACAGGACCGACCCAATCAGCCACATCCACTCCGGATGTTGAAGCTTGTAAAGCCGAGTTAAAATCCACGGCTGTCGTTAGATCTATCCAGAGACTCCAGAATCAGATCAGAATCGTTGATTCTTCACTAACCACACAATGGAAGGTCCACGAAGCCGCTTTTTGGGGTTTTTGCATATTGAAGATGATACCCAACACCCAATACCGAACTGAAGGGTTTTTGATTAAGAATGGTCTTTTTGATTTGCCAATTCCTGTTAAGGTCAAATTGATGTGTATATGGATTATTGAGTGGTTCACATTTTCTCACTGTTTAGACTTCTCTGTTCATAACCATGACTACATTCAGGCCATGGGTTGA ATGAAGAAGTGCGAGCTGTGTGGGCAGCAAGCGAGGATGTTCTGTGAGTCGGATCAGGCGAACCTATGTTGGGACTGCGACGAGAAGGTTCACTGTGCAAATTTTCTTGTTGCTAAACATTCTCGGAGCCTTCTTTGTCATGTATGCCAGTCTCCGACTCCATGGGCTGCCTCTGGTCGGAAGCTTACGCCGACGGTTTCTGTGTGCGAGGGGTGTGTCGATGTCCATGGTGGTAAATGCGAGCAAGGTGGATTTCAAGAGCGGCGTAGAGATAACGAGGAGGAAGTTGATGGTGGTGATGATTTTGACGATGGTGAAGGTTTCGATAGTTATGAGGGAGGTGATAGTGAGGAAGACGATGATGGGGATGAAGATGAGGACGAGGAGGAAGAGGATGAGGACGGAGAAAACCAGGTGGTGCCCTGGTCTTATGCATCTTCTTCGTCTCCACCACCGCCTCCGACAGTAACTTCTAGCAGCGAGGGCGAGATTTCAGCCGGCGCTGGTGTCGCATCGAAGCGGATGAGAGAATACGGCATCGATCTCGATTCCGATGATGAAATCGAGTGTTCTTCTGCACCACAGAGTACAAGGCCATTTTTCAATGACGAAGCGACTTCCTCGAGTTCCCTTAGGCCACTGAAGCAAGCAAGAGTTACAGGACCGACCCAATCAGCCACATCCACTCCGGATGTTGAAGCTTGTAAAGCCGAGTTAAAATCCACGGCTGTCGTTAGATCTATCCAGAGACTCCAGAATCAGATCAGAATCGTTGATTCTTCACTAACCACACAATGGAAGGTCCACGAAGCCGCTTTTTGGGGTTTTTGCATATTGAAGATGATACCCAACACCCAATACCGAACTGAAGGGTTTTTGATTAAGAATGGTCTTTTTGATTTGCCAATTCCTGTTAAGGTCAAATTGATGTGTATATGGATTATTGAGTGGTTCACATTTTCTCACTGTTTAGACTTCTCTGTTCATAACCATGACTACATTCAGGCCATGGGTTGA MKKCELCGQQARMFCESDQANLCWDCDEKVHCANFLVAKHSRSLLCHVCQSPTPWAASGRKLTPTVSVCEGCVDVHGGKCEQGGFQERRRDNEEEVDGGDDFDDGEGFDSYEGGDSEEDDDGDEDEDEEEEDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREYGIDLDSDDEIECSSAPQSTRPFFNDEATSSSSLRPLKQARVTGPTQSATSTPDVEACKAELKSTAVVRSIQRLQNQIRIVDSSLTTQWKVHEAAFWGFCILKMIPNTQYRTEGFLIKNGLFDLPIPVKVKLMCIWIIEWFTFSHCLDFSVHNHDYIQAMG Homology
BLAST of CmUC05G096120 vs. NCBI nr
Match: XP_038899463.1 (nucleolin [Benincasa hispida]) HSP 1 Score: 447.2 bits (1149), Expect = 1.3e-121 Identity = 234/261 (89.66%), Postives = 244/261 (93.49%), Query Frame = 0
BLAST of CmUC05G096120 vs. NCBI nr
Match: XP_008454616.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis melo] >KAA0036743.1 zinc finger protein CONSTANS-LIKE 4 [Cucumis melo var. makuwa] >TYJ95810.1 zinc finger protein CONSTANS-LIKE 4 [Cucumis melo var. makuwa]) HSP 1 Score: 440.3 bits (1131), Expect = 1.5e-119 Identity = 230/255 (90.20%), Postives = 240/255 (94.12%), Query Frame = 0
BLAST of CmUC05G096120 vs. NCBI nr
Match: XP_004146838.1 (zinc finger protein CONSTANS-LIKE 4 [Cucumis sativus] >KGN59860.1 hypothetical protein Csa_002023 [Cucumis sativus]) HSP 1 Score: 437.2 bits (1123), Expect = 1.3e-118 Identity = 230/255 (90.20%), Postives = 239/255 (93.73%), Query Frame = 0
BLAST of CmUC05G096120 vs. NCBI nr
Match: XP_022139730.1 (protein BFR2 [Momordica charantia]) HSP 1 Score: 423.3 bits (1087), Expect = 1.9e-114 Identity = 220/259 (84.94%), Postives = 239/259 (92.28%), Query Frame = 0
BLAST of CmUC05G096120 vs. NCBI nr
Match: XP_023535120.1 (protein BFR2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 421.4 bits (1082), Expect = 7.4e-114 Identity = 220/255 (86.27%), Postives = 237/255 (92.94%), Query Frame = 0
BLAST of CmUC05G096120 vs. ExPASy Swiss-Prot
Match: O23379 (Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN=COL11 PE=1 SV=2) HSP 1 Score: 63.5 bits (153), Expect = 5.1e-09 Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 0
BLAST of CmUC05G096120 vs. ExPASy Swiss-Prot
Match: O22800 (Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana OX=3702 GN=COL14 PE=1 SV=2) HSP 1 Score: 63.2 bits (152), Expect = 6.7e-09 Identity = 36/87 (41.38%), Postives = 45/87 (51.72%), Query Frame = 0
BLAST of CmUC05G096120 vs. ExPASy Swiss-Prot
Match: Q9LJB7 (B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.5e-08 Identity = 32/78 (41.03%), Postives = 42/78 (53.85%), Query Frame = 0
BLAST of CmUC05G096120 vs. ExPASy Swiss-Prot
Match: Q9LUA9 (Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.9e-08 Identity = 31/70 (44.29%), Postives = 40/70 (57.14%), Query Frame = 0
BLAST of CmUC05G096120 vs. ExPASy Swiss-Prot
Match: Q9SSE5 (Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana OX=3702 GN=COL9 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.9e-08 Identity = 30/70 (42.86%), Postives = 41/70 (58.57%), Query Frame = 0
BLAST of CmUC05G096120 vs. ExPASy TrEMBL
Match: A0A5D3B734 (Zinc finger protein CONSTANS-LIKE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00930 PE=4 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 7.4e-120 Identity = 230/255 (90.20%), Postives = 240/255 (94.12%), Query Frame = 0
BLAST of CmUC05G096120 vs. ExPASy TrEMBL
Match: A0A1S3BZT7 (zinc finger protein CONSTANS-LIKE 4 OS=Cucumis melo OX=3656 GN=LOC103494983 PE=4 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 7.4e-120 Identity = 230/255 (90.20%), Postives = 240/255 (94.12%), Query Frame = 0
BLAST of CmUC05G096120 vs. ExPASy TrEMBL
Match: A0A0A0LCX6 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G850640 PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 6.3e-119 Identity = 230/255 (90.20%), Postives = 239/255 (93.73%), Query Frame = 0
BLAST of CmUC05G096120 vs. ExPASy TrEMBL
Match: A0A6J1CD44 (protein BFR2 OS=Momordica charantia OX=3673 GN=LOC111010576 PE=4 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 9.4e-115 Identity = 220/259 (84.94%), Postives = 239/259 (92.28%), Query Frame = 0
BLAST of CmUC05G096120 vs. ExPASy TrEMBL
Match: A0A6J1F7H6 (protein BFR2 OS=Cucurbita moschata OX=3662 GN=LOC111443061 PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 9.7e-112 Identity = 219/259 (84.56%), Postives = 236/259 (91.12%), Query Frame = 0
BLAST of CmUC05G096120 vs. TAIR 10
Match: AT4G27310.1 (B-box type zinc finger family protein ) HSP 1 Score: 150.2 bits (378), Expect = 3.0e-36 Identity = 105/208 (50.48%), Postives = 125/208 (60.10%), Query Frame = 0
BLAST of CmUC05G096120 vs. TAIR 10
Match: AT5G54470.1 (B-box type zinc finger family protein ) HSP 1 Score: 128.3 bits (321), Expect = 1.2e-29 Identity = 93/210 (44.29%), Postives = 119/210 (56.67%), Query Frame = 0
BLAST of CmUC05G096120 vs. TAIR 10
Match: AT4G15250.1 (B-box type zinc finger protein with CCT domain ) HSP 1 Score: 63.5 bits (153), Expect = 3.6e-10 Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 0
BLAST of CmUC05G096120 vs. TAIR 10
Match: AT2G33500.1 (B-box type zinc finger protein with CCT domain ) HSP 1 Score: 63.2 bits (152), Expect = 4.8e-10 Identity = 36/87 (41.38%), Postives = 45/87 (51.72%), Query Frame = 0
BLAST of CmUC05G096120 vs. TAIR 10
Match: AT2G33500.2 (B-box type zinc finger protein with CCT domain ) HSP 1 Score: 63.2 bits (152), Expect = 4.8e-10 Identity = 36/87 (41.38%), Postives = 45/87 (51.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|