CmUC05G096060 (gene) Watermelon (USVL531) v1

Overview
NameCmUC05G096060
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr05: 24776659 .. 24777214 (-)
RNA-Seq ExpressionCmUC05G096060
SyntenyCmUC05G096060
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAGAAGCTTTTCTTTTGTTAGTCCCCCAGCGTAAACACGTGGATAACTCAAGTCACTGTAACCTTAATGTTAATCATAAATCTTTGGGGGCACTTTTGGCATGAGACTGTGCATTCGCACAAATGTGGTATTACAAATCCGACATCAAAAGTACACAGTGAAGCATTCAAGGATTCCCCCCCTTCCTTTTTGGAAGGAAAGGGGAAAAGATAAAAGTGTAACACAGAGCACCTTATCTCAACTAGTAACATTTTTTTTTTTCATGGAGAAAGATGACTTTTAATTTATACTATATATGGGGTTTCTTTTCACTATCTCATAAAGGGAAACTTACTTTCTGCAGCGGCTTTGAGATACTGTTACCATTTACTTATTTAATGTCAGGTAATTGCATAGGGGAGGCAGGCCATAATGTTGATGATGATCCTTTTGTCGGGGGAAAACATGCATGGAATGAAGTACGTGTCGATATGAGGCTAATTAGCTTCATGGGAATGGGAATAGATGTAGAGATTGGAAGGCATTGCAGAAATAATTGCAGAAATAATTAA

mRNA sequence

ATGTCTAGAAGCTTTTCTTTTGTTAGTCCCCCAGCCGGCTTTGAGATACTGTTACCATTTACTTATTTAATGTCAGGTAATTGCATAGGGGAGGCAGGCCATAATGTTGATGATGATCCTTTTGTCGGGGGAAAACATGCATGGAATGAAGTACGTGTCGATATGAGGCTAATTAGCTTCATGGGAATGGGAATAGATGTAGAGATTGGAAGGCATTGCAGAAATAATTGCAGAAATAATTAA

Coding sequence (CDS)

ATGTCTAGAAGCTTTTCTTTTGTTAGTCCCCCAGCCGGCTTTGAGATACTGTTACCATTTACTTATTTAATGTCAGGTAATTGCATAGGGGAGGCAGGCCATAATGTTGATGATGATCCTTTTGTCGGGGGAAAACATGCATGGAATGAAGTACGTGTCGATATGAGGCTAATTAGCTTCATGGGAATGGGAATAGATGTAGAGATTGGAAGGCATTGCAGAAATAATTGCAGAAATAATTAA

Protein sequence

MSRSFSFVSPPAGFEILLPFTYLMSGNCIGEAGHNVDDDPFVGGKHAWNEVRVDMRLISFMGMGIDVEIGRHCRNNCRNN
Homology
BLAST of CmUC05G096060 vs. NCBI nr
Match: XP_038896213.1 (uncharacterized protein LOC120084489 [Benincasa hispida])

HSP 1 Score: 69.3 bits (168), Expect = 1.7e-08
Identity = 36/57 (63.16%), Postives = 39/57 (68.42%), Query Frame = 0

Query: 16  ILLPFTYLMSGNCIGEAGHNVD--DDPFVGGKHAWNEVRVDMRLISFMGMGIDVEIG 71
           I + F  L   +C  +AGHN D  DDPFVGGKHAWNEVRVDM  ISFM M  D EIG
Sbjct: 64  IFMIFKSLFGPSC--QAGHNADDVDDPFVGGKHAWNEVRVDMSQISFMEMERDEEIG 118

BLAST of CmUC05G096060 vs. NCBI nr
Match: KAE8650712.1 (hypothetical protein Csa_009895 [Cucumis sativus])

HSP 1 Score: 65.9 bits (159), Expect = 1.9e-07
Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 0

Query: 29  IGEAGHNVDDDPFVGGKHAWNEVRVDMRLISFMGMGID 67
           +G+AGHN  DDPFVGGKHAWNE+RVDMR ISF+ M  D
Sbjct: 176 VGKAGHNAVDDPFVGGKHAWNELRVDMRQISFIEMERD 213

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038896213.11.7e-0863.16uncharacterized protein LOC120084489 [Benincasa hispida][more]
KAE8650712.11.9e-0773.68hypothetical protein Csa_009895 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC05G096060.1CmUC05G096060.1mRNA