CmUC05G094820 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC05G094820
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr05: 18501120 .. 18504845 (-)
RNA-Seq Expression	CmUC05G094820
Synteny	CmUC05G094820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCAAAACAAAGCAAACTGGTTTGGTTGGCTATGTCTTTCATAGGGACTACAGTAATATTTCTCAACACAACATTGCTTTACTTGTGCAGGATAACCCCGAACGGGACACGACCACGGCTCGTGACTCGTTAACTCAATTTGATCGTTTGTATGGAATCGTAGCTGACGAAGGTGTTGATGTAAAGGCTGCAAATTATATTTCCTCCACGCTAGCACGGTTCAAAGGCTCAAATGAGTTAACTCTGAACCGAGAGATTTAATGACCCAGAGATTATTATTTATCTTGAGCTGTACTACTTGATTATTATTCTAAGTGACGAACTTGGGCATAGCTCAAAGTTGTTAGATGCAAGATGTAGTACTTCATGATAAGATGTAATATTATAAAAATAAAAAAAAAATTATGAGGCGTAAGCTTCAATATAAATAAATACTCGATTATCAATAATTGGTCCTTTAAAATATTGGTTAAATCATGAGTTTGGTCATCGAACTTGAAATTTTATATATTGTATCTAATAGATTCCCTCAACTCTCAAATTTATCTAAACAAGTCTTTTTTAATTAATTATCTCAAGAATCTTTAAACTTTAAATGTGTCTAATAAGTGCTCAAGCCATTTAACTATGTGTTGAACCGTGTTTAGGCAGTTCAAGAATCTATAAAGAAAAAATTGGTTAATTGAATTACAAGTTTAATCTCTAACTTTGAAAGTGCCTAATAAGTCATAAATTGGCAATTCCAAAAAAGTCAAAAGAACCAAAAAGAAAGCAGAAAGAAAAAGAAAAAGAAAATGGGTTTTGAACTTTAAATATGTCCTATCTAATTGGCTCTTAAATTTTCAATTTTTCATCTAATAAACGTTGGAGAAAAATAATGTCAAATTTATGTCTAATAGGTAAGTGAATTTTAAAAAACAATGTTTAATTCAATGACCCACTAAGAAAAAAAATTGAAAGGTTAAAAGCTTGATAGATATTTTTTAAAGATAAAAATCAAACATCACCAAACTTTGGAGTTGTGTATCATTTTAAACCATAAACTAATAATTAAATTGATTTAAACTCTAAACTTTCATTAGTGAATCATTTTCTACTCTTGGTTAATGATTATAGTTATTTCACTTGTTTCAATCTAAAATCACCTAATAAAATATTTGCTTTCGCAAAATCCTAGCCAAAGTAAGATCACTAATGGATTTATTTAAACTTTCAAACTCAATCAAATAAAACAATACAGGTCAATTATCTCTGAGTTATATTCAGTTTTTTACGACTTTTTTTTATATCCAAAATGCCTTATTTAATTGGACTATACTCAATAGACAATAGTATAATAATTTTACGCCAACATGAGGATGACTTAACTACTCTCTTGACAAAATGTCATACGTTCAAATTTCTCACTTCAATTAGTTGTAATAAAAATATAGCAAAATGAACTAAAATATCATATAGTGGTCTATCAATGTCTACTCGATAGTGATATTTTACTATATTTGTAAATGTCTAATACTTTTTCCATTTAAAAAATAATAAAAAATAAATTTCTTTGAGTCCGTAACTAAATTTGTTTAAAGGTGGACAACAGAAACCAAGAAATTAAAAGAGAAAAAGAAAAATGAAAAACGTCGACAGCAGGGTTCGAACCTGCGCGGGCGAAGCCCAACAGATTTCAAGTCTGTCTCCTTAACCACTCGGACATATCGACAATTTGTGGTAACGAATATAATAAAAAATATTTATTGGGTATTTTAAATACTCCAAAGTTTGACCATTATTTGGTTATCTTCTTCGTCTTCTTGTCTTTCGGTTCTTTGTTTTGTTGGGCATTTTTTTATTAACCAGACGAGCCGCACCGGCACCAGAAACAAAAATGGACGCCATTGATTCCGTCTTCGATCCACTCCGCGAGTTCGCTAAGGATAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCCGATCGCAAAGGTACAATTTCCGTATCCCTTTTCATCTCTTTGTTTTAATCTCTGGTGGAGATATTATAACTAAGTTCCTCTGTTTCACGAGATTTATGTAGAGTTCACTAAGGTCGCGGTTCGTACAGCGATTGGCTTCGTCGTTATGGGATTCGTCGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAATATCATCGTCGGATCTGGCTAGGTCAGGATTTTGAATTTTTTTTTTTTTTTTTTTTATAATTATTTCACTTAGTTTCTCTAGCTTTCACTGTTTCGTGAATTGGGTACTCGTTTGATTGTTTCTCGAGTTTGCGTTTCTTCAACTTAGAATTCTTGAAGGTAATTAATTAGGTTTGATTTATGTAGAATTTCTGTATTATACAAGTTTAGTCCCTTTGTAGTCTTGAGCATCAAATGAAATTGGGATTTTGGATGGCCAAATTGGAATCTACAGGTTAAAGCTTCTCCTTGACTTTGGTTAGATATAGTTTGCGGATTGAGTTGATTATTATAATTATTGTTTATAATAGTTTGTAAATTGTGATAATATGTGTTTTTGGTAAAAATAGTAAACACGGTAATAAAGAAGCAAAGAGAGAATGAGTATGAAATAGTAAACAGTAGAACAAAGTGGGATTTGAAATAGTAATAATAATTATAGGTTATAGGTAATGGTAAACACACCATTATTATATTTGGAGTCTGGGTTGGGATATTATAGCCTACTCCACTAACTTCAAGCTGGGGGTCAAACACTCCCTTACTTTGCACGGGAGCGTGATTCTAAACACTAGAAAAGAAATTATTGGGAGTAATTTGGTTCATGTTTTTAAATTGTTATATGAATCTATGTCTAGAGCATATAGGTTATGAAGGGAGAAATGTTTTAATTGCTAGATTAGCGTTTTAGTTATGATTTTATATGAATTACCTGAGGTGGCCATTGATGGCTTGATCGAGTCTCTTTTCTACATGAATCTCCTTGGCTTTCTTGTTTCTTAAAGGTTCTGCCTATAGATCATATTCCATTTCAAACAAAATTAGAGTTCTCTCACCATTTCATACTGTTTGCAGTGTCAATGAATAATGTAGGATATATGGAACTAAACTAATCTTCTCAAACTCTTACAAGCATGAAGGAGAAAACACATCTGATCTTCTATCTCAATCGATGCCGAGCTTGAGAACAAAAATTGCTGTCCCATATCAAGCCTTATAAATTGCACATTGTTAGCTATTCTTGCTAGGTAGTTTTTAATTGACTGTTCAATTTACATTTTTTACAACTCTGCGCTTAATATATAGAGTGAGGTTCCATTTCCAGTTTCCAAATGAAAAAGAAGGGAACTCATCCCGCTGCAGACACTTGAAAAAGCTTCTTTCAAGGTGTCGAAGATTCTACCTTTATCATAGAACGTACAAAAGATGGTGGACACCAATTTTTGCTGGGAGAACTATTTGGCTCACTTTTGCATAAGCATAGTGATTTATGTAATTAGCCATTCTATGATCGAACACTGTTTTCATTCCCAAATAACAATTGCATGTAATAATTGATCGGTGTGATTGTTTGTTGGCTTCAGCCCTTTTTGAGACAACATTATCTTGCGTAAAACTTTGAATTGGTTCAATCTGTTTTGCAGACAGCTGAGGCCACAAAAAGAGCAGGCTGGACATAATAGAAGAAGGGAACTTGATCTACTATTTCAAATCCTTACTGATGTTTTTATTAATTTAAAAGCTTAA

mRNA sequence

ATGGAAGCAAAACAAAGCAAACTGGATAACCCCGAACGGGACACGACCACGGCTCGTGACTCGTTAACTCAATTTGATCGTTTGTATGGAATCGTAGCTGACGAAGACGAGCCGCACCGGCACCAGAAACAAAAATGGACGCCATTGATTCCGTCTTCGATCCACTCCGCGAGTTCGCTAAGGATAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCCGATCGCAAAGAGTTCACTAAGGTCGCGGTTCGTACAGCGATTGGCTTCGTCGTTATGGGATTCGTCGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAATATCATCGTCGGATCTGGCTAGACAGCTGAGGCCACAAAAAGAGCAGGCTGGACATAATAGAAGAAGGGAACTTGATCTACTATTTCAAATCCTTACTGATGTTTTTATTAATTTAAAAGCTTAA

Coding sequence (CDS)

ATGGAAGCAAAACAAAGCAAACTGGATAACCCCGAACGGGACACGACCACGGCTCGTGACTCGTTAACTCAATTTGATCGTTTGTATGGAATCGTAGCTGACGAAGACGAGCCGCACCGGCACCAGAAACAAAAATGGACGCCATTGATTCCGTCTTCGATCCACTCCGCGAGTTCGCTAAGGATAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCCGATCGCAAAGAGTTCACTAAGGTCGCGGTTCGTACAGCGATTGGCTTCGTCGTTATGGGATTCGTCGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAATATCATCGTCGGATCTGGCTAGACAGCTGAGGCCACAAAAAGAGCAGGCTGGACATAATAGAAGAAGGGAACTTGATCTACTATTTCAAATCCTTACTGATGTTTTTATTAATTTAAAAGCTTAA

Protein sequence

MEAKQSKLDNPERDTTTARDSLTQFDRLYGIVADEDEPHRHQKQKWTPLIPSSIHSASSLRIAYVSSSAVTSPIAKSSLRSRFVQRLASSLWDSSVSSSSSSLSPSIISSSDLARQLRPQKEQAGHNRRRELDLLFQILTDVFINLKA

Homology

[Close]

BLAST of CmUC05G094820 vs. NCBI nr
Match: XP_020262796.1 (zinc finger protein CONSTANS-LIKE 1-like [Asparagus officinalis])

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-04
Identity = 42/72 (58.33%), Postives = 45/72 (62.50%), Query Frame = 0


Query: 46  WTPLIPSSIHSASSLRIAYVSSSAVTSPIAKSSLRSRFVQRLASSLWDSSVSSSSSSLSP 105
           WT L PS I SA S R A+ SS   TS IA+SS + RF  R  S LWDS  SSSSSS SP
Sbjct: 40  WTRLNPSLIPSAISRRTAFASSRDATSQIARSSRKWRFGPRSDSLLWDSLGSSSSSSSSP 99

Query: 106 SIISSSDLARQL 118
           S  SSSDL   L
Sbjct: 100 STTSSSDLVEAL 111

[Close]

BLAST of CmUC05G094820 vs. ExPASy TrEMBL
Match: A0A0A0LXS8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097740 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.2e-19
Identity = 61/72 (84.72%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 77  SSLRSRFVQRLASSLWDSSVSSSSSSLSPSIISSSDLARQLRPQKEQAGHNRRRELDLLF 136
           SS RSRFVQRLASS WDS VSSSSSSLSPSI SSSDLARQLRPQKEQAG  RR ELD LF
Sbjct: 34  SSQRSRFVQRLASSSWDSLVSSSSSSLSPSITSSSDLARQLRPQKEQAGQYRRMELDQLF 93

Query: 137 QILTDVFINLKA 149
           QILT+V INLK+
Sbjct: 94  QILTNVIINLKS 105

The following BLAST results are available for this feature:

BLAST of CmUC05G094820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_020262796.1	1.2e-04	58.33	zinc finger protein CONSTANS-LIKE 1-like [Asparagus officinalis]	[more]

BLAST of CmUC05G094820 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC05G094820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXS8	4.2e-19	84.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097740 PE=4 SV=1	[more]

BLAST of CmUC05G094820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC05G094820.1	CmUC05G094820.1	mRNA