CmUC05G094130 (gene) Watermelon (USVL531) v1

Overview
NameCmUC05G094130
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionTranslocon-associated protein subunit beta
LocationCmU531Chr05: 16745384 .. 16747540 (-)
RNA-Seq ExpressionCmUC05G094130
SyntenyCmUC05G094130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAATCCGATTCAGGCTCCTCTGATCCATCTCCTCTTGGCTTTGCTCCTCGTCTCGTCAACGATCGCAACCTCCGATGTTCCATTCATTGTCGCGCACAAGAAGGCGTCGCTCACTCGCCTCAAAACCGGTGTCGAACGTGTCTCGGTCTCAATCGACATTTACAATCAGGGATCTTCGTATGTTCTCTTCAATTCCTTTAATCTGATTTCGCTTTTGTTTTCGAGATTCAGCTTTACTCACTCTGTGCTCTCTGAGTTGTAGATCGAATTGTTCTTTGCGCATGCGTGCTTTGATTCATTATGTTTTGTTCTGGATCTAAATTGGATTTGTTCCTACGTTGTTCCAGTTTCTTTTTTCCTTCGCTTCTCTCTCTTGTGTATGTGACAGGTTTTAAGTAGTCAGAAAATGTTAGGTTCAGGCGTCAGGAAAATGTTTTCAATGATAGAAGAATAGACGCTTTCATGGATGTGAAATTTGCTGCATTTGTATTTTATGAATTGTGGAAAAAGTTCGTATGTTTTGGTTCGATACGAAGATCCTCAAGACTATTATGAACTGGAACCAGGCGTAACTCTCCTGGCTGCATCAAGATATTCTGTATTTTCGTTTTTTTTTTTTTTAATGTAAATTTCGCAAAAGGGTTTACCAAGTCGTTTTATTTTGATGATTGCGGCATTGGCTGTCGGAATAGGCGATCATTCTAGGAGTTGTGCCTAGATCTTGTTTCACATTAAAAATCTGTTCATTAGGTCTGCTATATTTGCCATGCAACAAGAAGATATGAACTGCTCGTTGAGTTATTGTCTGTCAAAATTTTACAATTTGATGTACACTTATTTGTTTATGTACGGTGACTGCGGGTGAGAGCAGGGCTGTGTGTGTGTGATGAGCACTAACTGAAATTTAGAAATTGTCTAAACCAAAGTAGCACAAGTATCTATTTGACCTACATGAAGCAAACATTGAGAAGCTTGGAATGGGGCTTCTGACATGTTTACTTGGGCTTCTTTATAAGATAAAGGAGGTGGTTTATAAGGAACTTTGGCAGGGAAGAGTTGCCTGATTGCTTTGTTTGGCCTTTGTACTGTCCATGAAGCAGATTATCGTGCAAATTTATCTTTTCAATTTTATATGAATATAGTATTTCTTCATTTATGCGTTGCTTAAAGTTTCTGTAGTTTTCTTATCTTATGTTATCCCTGACTAGAGGGAAGGGAATCTTTTCCTTTTTCCCTTAACTCTGTTGCCTTTTGTATACTTTCATTTCTAAGTAGCCTGGTTTTTAATTTGTCTCCTCTTTTTTGTATTTTCACTTATAATGGTTACAGGACCGCATATGATGTAAGTCTGAACGACGCAAGCTGGCCAGGAGATATGTTTGATATCGTGAGTGGTGAGACTGCCAAATCGTGGGAAAGACTTGATGCGTAAGTGATACCATTTGTATAGTATTCTTTCCAATATGTCATGGTACCCTCCTTTGGGTTTTTGTGATTCTAACACAAATCTGCTGTTTGACAGTGGTGCTCATATATCTCATTCATTTGAATTAGAAGCAAAAACAAAAGGAATGTTTCATGGTTCACCTGCTGTTATCACATTCCGTGTCCCTACGAAGTCTGCTTTGCAGGTCAAATATCCTTTCAATTATGATTATGTTCTGGTTACATAAGGTCACAGACATTTACCATTCTTCTGAATATCTGTAGGAGGCCTTATCGACCCCAATTCTACCTTTGGATGTCCTCGCTGACAGGCCACCGGAGAAGAAGTTTGAGTGGGTAAGTTTATCCCTAGAGTGTCTTTTCCGCTTCAAGCATAATGATCTAAAATCTTGTCAATTTGGTTAACTGGAGCAATCTTTTTGTCTTTGCATGGAATTTATCTTTCACCCGGGGCGTAATTTCAACAGGTTAAGGTATGTTCCATTTCATTCTCCCAATTCTTCTATAAAACTCTTTTAAGTGCATAAGAAGACAGAAGCACGTCTTTGTTGACCATTTATTCACACGAGATTTGTTTTCCTCCCTGCAGAGGCTGCTTGCAAAGTATGGGTCTCTGATCTCGGTGATCTCCATCGTCGTTCTCTTCATATATCTTGTGGCTAGCCCATCGAAATCTGCTGCAAAGGGAAGCAAGAAGAAGCGTTAA

mRNA sequence

ATGGCGAATCCGATTCAGGCTCCTCTGATCCATCTCCTCTTGGCTTTGCTCCTCGTCTCGTCAACGATCGCAACCTCCGATGTTCCATTCATTGTCGCGCACAAGAAGGCGTCGCTCACTCGCCTCAAAACCGGTGTCGAACGTGTCTCGGTCTCAATCGACATTTACAATCAGGGATCTTCGACCGCATATGATGTAAGTCTGAACGACGCAAGCTGGCCAGGAGATATGTTTGATATCGTGAGTGGTGAGACTGCCAAATCGTGGGAAAGACTTGATGCTGGTGCTCATATATCTCATTCATTTGAATTAGAAGCAAAAACAAAAGGAATGTTTCATGGTTCACCTGCTGTTATCACATTCCGTGTCCCTACGAAGTCTGCTTTGCAGGAGGCCTTATCGACCCCAATTCTACCTTTGGATGTCCTCGCTGACAGGCCACCGGAGAAGAAGTTTGAGTGGGTTAAGAGGCTGCTTGCAAAGTATGGGTCTCTGATCTCGGTGATCTCCATCGTCGTTCTCTTCATATATCTTGTGGCTAGCCCATCGAAATCTGCTGCAAAGGGAAGCAAGAAGAAGCGTTAA

Coding sequence (CDS)

ATGGCGAATCCGATTCAGGCTCCTCTGATCCATCTCCTCTTGGCTTTGCTCCTCGTCTCGTCAACGATCGCAACCTCCGATGTTCCATTCATTGTCGCGCACAAGAAGGCGTCGCTCACTCGCCTCAAAACCGGTGTCGAACGTGTCTCGGTCTCAATCGACATTTACAATCAGGGATCTTCGACCGCATATGATGTAAGTCTGAACGACGCAAGCTGGCCAGGAGATATGTTTGATATCGTGAGTGGTGAGACTGCCAAATCGTGGGAAAGACTTGATGCTGGTGCTCATATATCTCATTCATTTGAATTAGAAGCAAAAACAAAAGGAATGTTTCATGGTTCACCTGCTGTTATCACATTCCGTGTCCCTACGAAGTCTGCTTTGCAGGAGGCCTTATCGACCCCAATTCTACCTTTGGATGTCCTCGCTGACAGGCCACCGGAGAAGAAGTTTGAGTGGGTTAAGAGGCTGCTTGCAAAGTATGGGTCTCTGATCTCGGTGATCTCCATCGTCGTTCTCTTCATATATCTTGTGGCTAGCCCATCGAAATCTGCTGCAAAGGGAAGCAAGAAGAAGCGTTAA

Protein sequence

MANPIQAPLIHLLLALLLVSSTIATSDVPFIVAHKKASLTRLKTGVERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETAKSWERLDAGAHISHSFELEAKTKGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVASPSKSAAKGSKKKR
Homology
[Close]
BLAST of CmUC05G094130 vs. NCBI nr
Match: XP_038894726.1 (translocon-associated protein subunit beta [Benincasa hispida])

HSP 1 Score: 349.7 bits (896), Expect = 1.6e-92
Identity = 181/194 (93.30%), Postives = 188/194 (96.91%), Query Frame = 0 

Query: 1   MANPIQAPLIHLLLALLLVSSTIATSDVPFIVAHKKASLTRLKTGVERVSVSIDIYNQGS 60
           MANPIQ PLIHLLLALL VSSTIATSDVPFIVAHKKASLTRLK+GVERVSVSIDIYN+GS
Sbjct: 1   MANPIQPPLIHLLLALLFVSSTIATSDVPFIVAHKKASLTRLKSGVERVSVSIDIYNRGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETAKSWERLDAGAHISHSFELEAKTKGMFHGSPAVIT 120
           STAYD SLNDASWP DMFDIVSGET+KSWERLDAG HISHSFELEAKTKG+FHGSPA+IT
Sbjct: 61  STAYDASLNDASWPEDMFDIVSGETSKSWERLDAGGHISHSFELEAKTKGLFHGSPAIIT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FRVPTKSALQEALSTPILPLD+LAD+PPEKK EWVKRLLAKYGSLISVISIVVLFIYLVA
Sbjct: 121 FRVPTKSALQEALSTPILPLDILADKPPEKKLEWVKRLLAKYGSLISVISIVVLFIYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           SPSKSAAKGSKKKR
Sbjct: 181 SPSKSAAKGSKKKR 194

[Close]
BLAST of CmUC05G094130 vs. NCBI nr
Match: XP_022156478.1 (translocon-associated protein subunit beta [Momordica charantia])

HSP 1 Score: 347.8 bits (891), Expect = 6.0e-92
Identity = 180/194 (92.78%), Postives = 188/194 (96.91%), Query Frame = 0 

Query: 1   MANPIQAPLIHLLLALLLVSSTIATSDVPFIVAHKKASLTRLKTGVERVSVSIDIYNQGS 60
           MANPIQ+PLI LL ALL V+STIATSDVPFIVAHKKASLTRLK+G ERVSVSIDIYNQGS
Sbjct: 1   MANPIQSPLIRLLFALLFVASTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETAKSWERLDAGAHISHSFELEAKTKGMFHGSPAVIT 120
           STAYDVSLNDASWP D+FDI+SGET+KSWERLDAGAH+SHSFELEAKTKGMFHGSPAVIT
Sbjct: 61  STAYDVSLNDASWPVDVFDIISGETSKSWERLDAGAHLSHSFELEAKTKGMFHGSPAVIT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FRVPTKSALQEA STPILPLDVLADRPPEKKFEWVKRLLAKYGSLISV+SIVVLFIYLVA
Sbjct: 121 FRVPTKSALQEAYSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVVSIVVLFIYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           SPSKSAAKGSKKKR
Sbjct: 181 SPSKSAAKGSKKKR 194

[Close]
BLAST of CmUC05G094130 vs. NCBI nr
Match: XP_022983434.1 (translocon-associated protein subunit beta isoform X1 [Cucurbita maxima])

HSP 1 Score: 345.9 bits (886), Expect = 2.3e-91
Identity = 179/194 (92.27%), Postives = 189/194 (97.42%), Query Frame = 0 

Query: 1   MANPIQAPLIHLLLALLLVSSTIATSDVPFIVAHKKASLTRLKTGVERVSVSIDIYNQGS 60
           MAN IQA LIHLLLALL VSSTIA+SDVPFIVAHKKA+LTRLK+GVERVSVSI+IYNQGS
Sbjct: 1   MANLIQARLIHLLLALLFVSSTIASSDVPFIVAHKKATLTRLKSGVERVSVSIEIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETAKSWERLDAGAHISHSFELEAKTKGMFHGSPAVIT 120
           STAYDV+LNDASWPGD+FDIVSGET+KSWERLDAG H+SHSFELEAKTKGMFHGSPAVIT
Sbjct: 61  STAYDVTLNDASWPGDVFDIVSGETSKSWERLDAGGHLSHSFELEAKTKGMFHGSPAVIT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISV+S VVLF+YLVA
Sbjct: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVVSFVVLFVYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           SPSKSAAKGSKKKR
Sbjct: 181 SPSKSAAKGSKKKR 194

[Close]
BLAST of CmUC05G094130 vs. NCBI nr
Match: XP_022935419.1 (translocon-associated protein subunit beta isoform X1 [Cucurbita moschata] >XP_022935420.1 translocon-associated protein subunit beta isoform X2 [Cucurbita moschata])

HSP 1 Score: 344.4 bits (882), Expect = 6.6e-91
Identity = 178/194 (91.75%), Postives = 188/194 (96.91%), Query Frame = 0 

Query: 1   MANPIQAPLIHLLLALLLVSSTIATSDVPFIVAHKKASLTRLKTGVERVSVSIDIYNQGS 60
           MAN IQA LIHLLLA L VSSTIA+SDVPFIVAHKKA+LTRLK+GVERVSVSI+IYNQGS
Sbjct: 1   MANLIQARLIHLLLAFLFVSSTIASSDVPFIVAHKKATLTRLKSGVERVSVSIEIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETAKSWERLDAGAHISHSFELEAKTKGMFHGSPAVIT 120
           STAYDV+LNDASWPGD+FDIVSGET+KSWERLDAG H+SHSFELEAKTKGMFHGSPAVIT
Sbjct: 61  STAYDVTLNDASWPGDVFDIVSGETSKSWERLDAGGHLSHSFELEAKTKGMFHGSPAVIT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISV+S VVLF+YLVA
Sbjct: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVVSFVVLFVYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           SPSKSAAKGSKKKR
Sbjct: 181 SPSKSAAKGSKKKR 194

[Close]
BLAST of CmUC05G094130 vs. NCBI nr
Match: XP_022983435.1 (translocon-associated protein subunit beta isoform X2 [Cucurbita maxima])

HSP 1 Score: 344.0 bits (881), Expect = 8.6e-91
Identity = 178/194 (91.75%), Postives = 188/194 (96.91%), Query Frame = 0 

Query: 1   MANPIQAPLIHLLLALLLVSSTIATSDVPFIVAHKKASLTRLKTGVERVSVSIDIYNQGS 60
           MAN IQA LIHLLLALL VSSTIA+SDVPFIVAHKKA+LTRLK+GVERVSVSI+IYNQGS
Sbjct: 1   MANLIQARLIHLLLALLFVSSTIASSDVPFIVAHKKATLTRLKSGVERVSVSIEIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETAKSWERLDAGAHISHSFELEAKTKGMFHGSPAVIT 120
           STAYDV+LNDASWPGD+FDIVSGET+KSWERLDAG H+SHSFELEAKTKGMFHGSPAVIT
Sbjct: 61  STAYDVTLNDASWPGDVFDIVSGETSKSWERLDAGGHLSHSFELEAKTKGMFHGSPAVIT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FRVPTKSALQEALSTPILPLDVLADRPPEKKFEW KRLLAKYGSLISV+S VVLF+YLVA
Sbjct: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWFKRLLAKYGSLISVVSFVVLFVYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           SPSKSAAKGSKKKR
Sbjct: 181 SPSKSAAKGSKKKR 194

[Close]
BLAST of CmUC05G094130 vs. ExPASy Swiss-Prot
Match: Q5E9E4 (Translocon-associated protein subunit beta OS=Bos taurus OX=9913 GN=SSR2 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-07
Identity = 34/117 (29.06%), Postives = 59/117 (50.43%), Query Frame = 0 

Query: 36  KASLTRLKTGVERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETAKSWERLDAG 95
           K+ L R       +++  +IYN GSS A DV L+D S+P + F IVSG     W+R+   
Sbjct: 27  KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86

Query: 96  AHISHSFELEAKTKGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKF 153
           +++SH+  L     G F+ + A +T+       +    ++      +LA R  +++F
Sbjct: 87  SNVSHTVVLRPLKAGYFNFTSATVTYLAQEDGPVVIGFTSAPGQGGILAQREFDRRF 143

[Close]
BLAST of CmUC05G094130 vs. ExPASy Swiss-Prot
Match: Q9CPW5 (Translocon-associated protein subunit beta OS=Mus musculus OX=10090 GN=Ssr2 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.6e-07
Identity = 34/112 (30.36%), Postives = 59/112 (52.68%), Query Frame = 0 

Query: 10  IHLLLALLLVSSTIATSDVPFIVAHKKASLTRLKTGVERVSVSIDIYNQGSSTAYDVSLN 69
           + LL  ++L    ++ ++    +   K+ L R       +++  +IYN GSS A DV L+
Sbjct: 1   MRLLAVVVLALLAVSQAEEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELS 60

Query: 70  DASWPGDMFDIVSGETAKSWERLDAGAHISHSFELEAKTKGMFHGSPAVITF 122
           D S+P + F IVSG     W+R+   +++SH+  L     G F+ + A IT+
Sbjct: 61  DDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITY 112

[Close]
BLAST of CmUC05G094130 vs. ExPASy Swiss-Prot
Match: P23438 (Translocon-associated protein subunit beta OS=Canis lupus familiaris OX=9615 GN=SSR2 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.0e-06
Identity = 47/183 (25.68%), Postives = 88/183 (48.09%), Query Frame = 0 

Query: 10  IHLLLALLLVSSTIATSDVPFIVAHKKASLTRLKTGVERVSVSIDIYNQGSSTAYDVSLN 69
           + LL ++LL    ++ ++    +   K+ L R       +++  +IYN GSS A DV L+
Sbjct: 1   MRLLASVLLALFAVSHAEEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELS 60

Query: 70  DASWPGDMFDIVSGETAKSWERLDAGAHISHSFELEAKTKGMFHGSPAVITFRVPTKSAL 129
           D S+P + F IVSG     W+R+   +++SH+  L     G F+ + A +T+       +
Sbjct: 61  DDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATVTYLAQEDGPV 120

Query: 130 QEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVASPSKSAAKG 189
               ++      +LA R  +++F       A +G ++++ SI +  +   +S  K     
Sbjct: 121 VIGFTSAPGQGGILAQREFDRRFSPHFLDWAAFG-VMTLPSIGIPLLLWYSSKRKYDTPK 180

Query: 190 SKK 193
           SKK
Sbjct: 181 SKK 182

[Close]
BLAST of CmUC05G094130 vs. ExPASy Swiss-Prot
Match: P43308 (Translocon-associated protein subunit beta OS=Homo sapiens OX=9606 GN=SSR2 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.0e-06
Identity = 34/112 (30.36%), Postives = 58/112 (51.79%), Query Frame = 0 

Query: 10  IHLLLALLLVSSTIATSDVPFIVAHKKASLTRLKTGVERVSVSIDIYNQGSSTAYDVSLN 69
           + LL  ++L    +  ++    +   K+ L R       +++  +IYN GSS A DV L+
Sbjct: 1   MRLLSFVVLALFAVTQAEEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELS 60

Query: 70  DASWPGDMFDIVSGETAKSWERLDAGAHISHSFELEAKTKGMFHGSPAVITF 122
           D S+P + F IVSG     W+R+   +++SH+  L     G F+ + A IT+
Sbjct: 61  DDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITY 112

[Close]
BLAST of CmUC05G094130 vs. ExPASy TrEMBL
Match: A0A6J1DQQ5 (Translocon-associated protein subunit beta OS=Momordica charantia OX=3673 GN=LOC111023364 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.9e-92
Identity = 180/194 (92.78%), Postives = 188/194 (96.91%), Query Frame = 0 

Query: 1   MANPIQAPLIHLLLALLLVSSTIATSDVPFIVAHKKASLTRLKTGVERVSVSIDIYNQGS 60
           MANPIQ+PLI LL ALL V+STIATSDVPFIVAHKKASLTRLK+G ERVSVSIDIYNQGS
Sbjct: 1   MANPIQSPLIRLLFALLFVASTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETAKSWERLDAGAHISHSFELEAKTKGMFHGSPAVIT 120
           STAYDVSLNDASWP D+FDI+SGET+KSWERLDAGAH+SHSFELEAKTKGMFHGSPAVIT
Sbjct: 61  STAYDVSLNDASWPVDVFDIISGETSKSWERLDAGAHLSHSFELEAKTKGMFHGSPAVIT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FRVPTKSALQEA STPILPLDVLADRPPEKKFEWVKRLLAKYGSLISV+SIVVLFIYLVA
Sbjct: 121 FRVPTKSALQEAYSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVVSIVVLFIYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           SPSKSAAKGSKKKR
Sbjct: 181 SPSKSAAKGSKKKR 194

[Close]
BLAST of CmUC05G094130 vs. ExPASy TrEMBL
Match: A0A6J1J7C6 (Translocon-associated protein subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111482040 PE=3 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.1e-91
Identity = 179/194 (92.27%), Postives = 189/194 (97.42%), Query Frame = 0 

Query: 1   MANPIQAPLIHLLLALLLVSSTIATSDVPFIVAHKKASLTRLKTGVERVSVSIDIYNQGS 60
           MAN IQA LIHLLLALL VSSTIA+SDVPFIVAHKKA+LTRLK+GVERVSVSI+IYNQGS
Sbjct: 1   MANLIQARLIHLLLALLFVSSTIASSDVPFIVAHKKATLTRLKSGVERVSVSIEIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETAKSWERLDAGAHISHSFELEAKTKGMFHGSPAVIT 120
           STAYDV+LNDASWPGD+FDIVSGET+KSWERLDAG H+SHSFELEAKTKGMFHGSPAVIT
Sbjct: 61  STAYDVTLNDASWPGDVFDIVSGETSKSWERLDAGGHLSHSFELEAKTKGMFHGSPAVIT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISV+S VVLF+YLVA
Sbjct: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVVSFVVLFVYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           SPSKSAAKGSKKKR
Sbjct: 181 SPSKSAAKGSKKKR 194

[Close]
BLAST of CmUC05G094130 vs. ExPASy TrEMBL
Match: A0A6J1FAK9 (Translocon-associated protein subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111442301 PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.2e-91
Identity = 178/194 (91.75%), Postives = 188/194 (96.91%), Query Frame = 0 

Query: 1   MANPIQAPLIHLLLALLLVSSTIATSDVPFIVAHKKASLTRLKTGVERVSVSIDIYNQGS 60
           MAN IQA LIHLLLA L VSSTIA+SDVPFIVAHKKA+LTRLK+GVERVSVSI+IYNQGS
Sbjct: 1   MANLIQARLIHLLLAFLFVSSTIASSDVPFIVAHKKATLTRLKSGVERVSVSIEIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETAKSWERLDAGAHISHSFELEAKTKGMFHGSPAVIT 120
           STAYDV+LNDASWPGD+FDIVSGET+KSWERLDAG H+SHSFELEAKTKGMFHGSPAVIT
Sbjct: 61  STAYDVTLNDASWPGDVFDIVSGETSKSWERLDAGGHLSHSFELEAKTKGMFHGSPAVIT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISV+S VVLF+YLVA
Sbjct: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVVSFVVLFVYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           SPSKSAAKGSKKKR
Sbjct: 181 SPSKSAAKGSKKKR 194

[Close]
BLAST of CmUC05G094130 vs. ExPASy TrEMBL
Match: A0A6J1J5V1 (Translocon-associated protein subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111482040 PE=3 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.2e-91
Identity = 178/194 (91.75%), Postives = 188/194 (96.91%), Query Frame = 0 

Query: 1   MANPIQAPLIHLLLALLLVSSTIATSDVPFIVAHKKASLTRLKTGVERVSVSIDIYNQGS 60
           MAN IQA LIHLLLALL VSSTIA+SDVPFIVAHKKA+LTRLK+GVERVSVSI+IYNQGS
Sbjct: 1   MANLIQARLIHLLLALLFVSSTIASSDVPFIVAHKKATLTRLKSGVERVSVSIEIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETAKSWERLDAGAHISHSFELEAKTKGMFHGSPAVIT 120
           STAYDV+LNDASWPGD+FDIVSGET+KSWERLDAG H+SHSFELEAKTKGMFHGSPAVIT
Sbjct: 61  STAYDVTLNDASWPGDVFDIVSGETSKSWERLDAGGHLSHSFELEAKTKGMFHGSPAVIT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FRVPTKSALQEALSTPILPLDVLADRPPEKKFEW KRLLAKYGSLISV+S VVLF+YLVA
Sbjct: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWFKRLLAKYGSLISVVSFVVLFVYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           SPSKSAAKGSKKKR
Sbjct: 181 SPSKSAAKGSKKKR 194

[Close]
BLAST of CmUC05G094130 vs. ExPASy TrEMBL
Match: A0A6J1EL83 (Translocon-associated protein subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111435340 PE=3 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.1e-90
Identity = 175/194 (90.21%), Postives = 187/194 (96.39%), Query Frame = 0 

Query: 1   MANPIQAPLIHLLLALLLVSSTIATSDVPFIVAHKKASLTRLKTGVERVSVSIDIYNQGS 60
           MANP  APL+++LLALLLVSSTIATSDVPFIVAHKKASLTRLK+G ERVSVSIDIYNQGS
Sbjct: 1   MANPTPAPLVYVLLALLLVSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETAKSWERLDAGAHISHSFELEAKTKGMFHGSPAVIT 120
           STAYDVSLNDASWPGD+FD++SGET+KSWERLDAG H+SHSFELEAKTKGMFHGSPAV+T
Sbjct: 61  STAYDVSLNDASWPGDVFDVISGETSKSWERLDAGGHLSHSFELEAKTKGMFHGSPAVVT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FRVPTKSALQEALSTPILPLDVLADR PE KFEWVKRLLAKYGSLISV SIV+LFIYLVA
Sbjct: 121 FRVPTKSALQEALSTPILPLDVLADRLPENKFEWVKRLLAKYGSLISVNSIVILFIYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           SPSKS+AKGSKKKR
Sbjct: 181 SPSKSSAKGSKKKR 194

[Close]
BLAST of CmUC05G094130 vs. TAIR 10
Match: AT5G14030.1 (translocon-associated protein beta (TRAPB) family protein )

HSP 1 Score: 245.7 bits (626), Expect = 3.0e-65
Identity = 124/194 (63.92%), Postives = 155/194 (79.90%), Query Frame = 0 

Query: 1   MANPIQAPLIHLLLALLLVSSTIATSDVPFIVAHKKASLTRLKTGVERVSVSIDIYNQGS 60
           MA  +   LI  +   +LVS++ ATS+VPF+V HKKA+L RLK+G ERVSVS DIYNQGS
Sbjct: 1   MAVAVAKLLISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETAKSWERLDAGAHISHSFELEAKTKGMFHGSPAVIT 120
           S+AYDV+L D SW    F++V+G T+KSWERLDAG  +SHS ELEAK KG+F+G+PAV+T
Sbjct: 61  SSAYDVTLTDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FR+PTK ALQEA STP+LPLD+LAD+PP K  +  KRLLAKYGSL+SVIS+VV FIYLVA
Sbjct: 121 FRIPTKPALQEAYSTPLLPLDILADKPPTKPLDVAKRLLAKYGSLVSVISMVVCFIYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           +P  + +K S KK+
Sbjct: 181 TPKSNVSKASSKKK 194

[Close]
BLAST of CmUC05G094130 vs. TAIR 10
Match: AT5G14030.2 (translocon-associated protein beta (TRAPB) family protein )

HSP 1 Score: 245.7 bits (626), Expect = 3.0e-65
Identity = 124/194 (63.92%), Postives = 155/194 (79.90%), Query Frame = 0 

Query: 1   MANPIQAPLIHLLLALLLVSSTIATSDVPFIVAHKKASLTRLKTGVERVSVSIDIYNQGS 60
           MA  +   LI  +   +LVS++ ATS+VPF+V HKKA+L RLK+G ERVSVS DIYNQGS
Sbjct: 1   MAVAVAKLLISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETAKSWERLDAGAHISHSFELEAKTKGMFHGSPAVIT 120
           S+AYDV+L D SW    F++V+G T+KSWERLDAG  +SHS ELEAK KG+F+G+PAV+T
Sbjct: 61  SSAYDVTLTDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FR+PTK ALQEA STP+LPLD+LAD+PP K  +  KRLLAKYGSL+SVIS+VV FIYLVA
Sbjct: 121 FRIPTKPALQEAYSTPLLPLDILADKPPTKPLDVAKRLLAKYGSLVSVISMVVCFIYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           +P  + +K S KK+
Sbjct: 181 TPKSNVSKASSKKK 194

[Close]
BLAST of CmUC05G094130 vs. TAIR 10
Match: AT5G14030.3 (translocon-associated protein beta (TRAPB) family protein )

HSP 1 Score: 245.7 bits (626), Expect = 3.0e-65
Identity = 124/194 (63.92%), Postives = 155/194 (79.90%), Query Frame = 0 

Query: 1   MANPIQAPLIHLLLALLLVSSTIATSDVPFIVAHKKASLTRLKTGVERVSVSIDIYNQGS 60
           MA  +   LI  +   +LVS++ ATS+VPF+V HKKA+L RLK+G ERVSVS DIYNQGS
Sbjct: 1   MAVAVAKLLISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETAKSWERLDAGAHISHSFELEAKTKGMFHGSPAVIT 120
           S+AYDV+L D SW    F++V+G T+KSWERLDAG  +SHS ELEAK KG+F+G+PAV+T
Sbjct: 61  SSAYDVTLTDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FR+PTK ALQEA STP+LPLD+LAD+PP K  +  KRLLAKYGSL+SVIS+VV FIYLVA
Sbjct: 121 FRIPTKPALQEAYSTPLLPLDILADKPPTKPLDVAKRLLAKYGSLVSVISMVVCFIYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           +P  + +K S KK+
Sbjct: 181 TPKSNVSKASSKKK 194

[Close]
BLAST of CmUC05G094130 vs. TAIR 10
Match: AT5G14030.4 (translocon-associated protein beta (TRAPB) family protein )

HSP 1 Score: 245.7 bits (626), Expect = 3.0e-65
Identity = 124/194 (63.92%), Postives = 155/194 (79.90%), Query Frame = 0 

Query: 1   MANPIQAPLIHLLLALLLVSSTIATSDVPFIVAHKKASLTRLKTGVERVSVSIDIYNQGS 60
           MA  +   LI  +   +LVS++ ATS+VPF+V HKKA+L RLK+G ERVSVS DIYNQGS
Sbjct: 1   MAVAVAKLLISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETAKSWERLDAGAHISHSFELEAKTKGMFHGSPAVIT 120
           S+AYDV+L D SW    F++V+G T+KSWERLDAG  +SHS ELEAK KG+F+G+PAV+T
Sbjct: 61  SSAYDVTLTDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FR+PTK ALQEA STP+LPLD+LAD+PP K  +  KRLLAKYGSL+SVIS+VV FIYLVA
Sbjct: 121 FRIPTKPALQEAYSTPLLPLDILADKPPTKPLDVAKRLLAKYGSLVSVISMVVCFIYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           +P  + +K S KK+
Sbjct: 181 TPKSNVSKASSKKK 194

The following BLAST results are available for this feature:
BLAST of CmUC05G094130 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038894726.11.6e-9293.30translocon-associated protein subunit beta [Benincasa hispida][more]
XP_022156478.16.0e-9292.78translocon-associated protein subunit beta [Momordica charantia][more]
XP_022983434.12.3e-9192.27translocon-associated protein subunit beta isoform X1 [Cucurbita maxima][more]
XP_022935419.16.6e-9191.75translocon-associated protein subunit beta isoform X1 [Cucurbita moschata] >XP_0... [more]
XP_022983435.18.6e-9191.75translocon-associated protein subunit beta isoform X2 [Cucurbita maxima][more]
BLAST of CmUC05G094130 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5E9E41.6e-0729.06Translocon-associated protein subunit beta OS=Bos taurus OX=9913 GN=SSR2 PE=2 SV... [more]
Q9CPW53.6e-0730.36Translocon-associated protein subunit beta OS=Mus musculus OX=10090 GN=Ssr2 PE=1... [more]
P234381.0e-0625.68Translocon-associated protein subunit beta OS=Canis lupus familiaris OX=9615 GN=... [more]
P433081.0e-0630.36Translocon-associated protein subunit beta OS=Homo sapiens OX=9606 GN=SSR2 PE=1 ... [more]
BLAST of CmUC05G094130 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DQQ52.9e-9292.78Translocon-associated protein subunit beta OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A6J1J7C61.1e-9192.27Translocon-associated protein subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1FAK93.2e-9191.75Translocon-associated protein subunit beta OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1J5V14.2e-9191.75Translocon-associated protein subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1EL832.1e-9090.21Translocon-associated protein subunit beta OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
BLAST of CmUC05G094130 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G14030.13.0e-6563.92translocon-associated protein beta (TRAPB) family protein [more]
AT5G14030.23.0e-6563.92translocon-associated protein beta (TRAPB) family protein [more]
AT5G14030.33.0e-6563.92translocon-associated protein beta (TRAPB) family protein [more]
AT5G14030.43.0e-6563.92translocon-associated protein beta (TRAPB) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF05753TRAP_betacoord: 16..190
e-value: 6.9E-53
score: 178.7
NoneNo IPR availablePANTHERPTHR12861:SF7TRANSLOCON-ASSOCIATED PROTEIN SUBUNIT BETA-LIKEcoord: 9..193
NoneNo IPR availablePANTHERPTHR12861TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNITcoord: 9..193
IPR008856Translocon-associated protein subunit betaPIRSFPIRSF016400TRAP-betacoord: 5..194
e-value: 7.4E-60
score: 199.5

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC05G094130.1CmUC05G094130.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005783 endoplasmic reticulum