CmUC05G094060 (gene) Watermelon (USVL531) v1

Overview
NameCmUC05G094060
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr05: 16576260 .. 16576574 (+)
RNA-Seq ExpressionCmUC05G094060
SyntenyCmUC05G094060
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTACCACTGCCGTCTGCTTCTGTGTTGCCTTATCTCTGGCCACCTTTTTTGCCTTATCTCCGGTGGCCGTCTCTTCAATATCGGCTTCTCCACCCGTTTCACCTCACAGAACTTATCAAAATATGTCTTCTTTTTTCCCTTCTGTTGATGAGCATTCTTCTCCCATTTCTGCAGATCCGGCATCGGCACCAGGCTCTGGCGAGTTCATGGGGAAGAGTGGGTCAAGTGATGTGAAGCTCAATCATGGGGTCTCAGCTTTTGGTCTGAGCATTTGCAGTTTGTTTAGTTTAAGAGTTTTTCTTAGTGTTTGA

mRNA sequence

ATGGCTACCACTGCCGTCTGCTTCTGTGTTGCCTTATCTCTGGCCACCTTTTTTGCCTTATCTCCGGTGGCCGTCTCTTCAATATCGGCTTCTCCACCCGTTTCACCTCACAGAACTTATCAAAATATGTCTTCTTTTTTCCCTTCTGTTGATGAGCATTCTTCTCCCATTTCTGCAGATCCGGCATCGGCACCAGGCTCTGGCGAGTTCATGGGGAAGAGTGGGTCAAGTGATGTGAAGCTCAATCATGGGGTCTCAGCTTTTGGTCTGAGCATTTGCAGTTTGTTTAGTTTAAGAGTTTTTCTTAGTGTTTGA

Coding sequence (CDS)

ATGGCTACCACTGCCGTCTGCTTCTGTGTTGCCTTATCTCTGGCCACCTTTTTTGCCTTATCTCCGGTGGCCGTCTCTTCAATATCGGCTTCTCCACCCGTTTCACCTCACAGAACTTATCAAAATATGTCTTCTTTTTTCCCTTCTGTTGATGAGCATTCTTCTCCCATTTCTGCAGATCCGGCATCGGCACCAGGCTCTGGCGAGTTCATGGGGAAGAGTGGGTCAAGTGATGTGAAGCTCAATCATGGGGTCTCAGCTTTTGGTCTGAGCATTTGCAGTTTGTTTAGTTTAAGAGTTTTTCTTAGTGTTTGA

Protein sequence

MATTAVCFCVALSLATFFALSPVAVSSISASPPVSPHRTYQNMSSFFPSVDEHSSPISADPASAPGSGEFMGKSGSSDVKLNHGVSAFGLSICSLFSLRVFLSV
Homology
BLAST of CmUC05G094060 vs. NCBI nr
Match: XP_022934640.1 (uncharacterized protein LOC111441775 [Cucurbita moschata])

HSP 1 Score: 129.0 bits (323), Expect = 2.3e-26
Identity = 81/109 (74.31%), Postives = 89/109 (81.65%), Query Frame = 0

Query: 1   MATTAVC-FCVALSLATFFALSPVAVSSISASPPVSPHRTYQNMSSFFPS-VDEHSSPIS 60
           MAT A   FCVALSLA FFA+SP AVS+ISASPPV PHR  QNMSSFFPS VD  SSPIS
Sbjct: 1   MATAAAAFFCVALSLAAFFAVSPAAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPIS 60

Query: 61  ADPASAPG--SGEFMGK-SGSSDVKLNHGVSAFGLSICSLFSLRVFLSV 105
           A PA A    SGEF+GK SGS+ VKLNHG+SAFGLSICS+FSLR+FL+V
Sbjct: 61  AAPAPATALESGEFIGKRSGSNSVKLNHGISAFGLSICSVFSLRLFLNV 109

BLAST of CmUC05G094060 vs. NCBI nr
Match: XP_022983589.1 (uncharacterized protein LOC111482150 [Cucurbita maxima])

HSP 1 Score: 122.9 bits (307), Expect = 1.7e-24
Identity = 77/105 (73.33%), Postives = 84/105 (80.00%), Query Frame = 0

Query: 2   ATTAVCFCVALSLATFFALSPVAVSSISASPPVSPHRTYQNMSSFFPS-VDEHSSPISAD 61
           A  A  FCVALSLAT FALSP AVS+ISASPPV PHR  QNMSSFFPS VD  SSPISA 
Sbjct: 8   AAAASFFCVALSLATLFALSPSAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISAA 67

Query: 62  PASAPGSGEFMGK-SGSSDVKLNHGVSAFGLSICSLFSLRVFLSV 105
           PA    SGEF+GK SGS+ VKLNHG+SAFGLSICS+F LR+ L+V
Sbjct: 68  PALE--SGEFIGKRSGSNSVKLNHGISAFGLSICSVFGLRLVLNV 110

BLAST of CmUC05G094060 vs. NCBI nr
Match: KAE8021266.1 (hypothetical protein FH972_007173 [Carpinus fangiana])

HSP 1 Score: 67.8 bits (164), Expect = 6.4e-08
Identity = 46/102 (45.10%), Postives = 60/102 (58.82%), Query Frame = 0

Query: 4   TAVCFCVALSLATFFAL----SPVAVSSISASPPVSPHRTYQNMSSFFPSVDEHSSPISA 63
           T+  FC ALS+A FFA+    S     +ISASP V+P+ T  NMSSFFPS  +   P SA
Sbjct: 3   TSTKFCAALSMAIFFAILHGRSSTCEPTISASPAVTPYITSPNMSSFFPSPSDQRPPSSA 62

Query: 64  DP------ASAPGSGEFMGKSGSSDVKLNHGVSAFGLSICSL 96
            P      A  P SGEF+GKS S+ V+   G++  G+ + SL
Sbjct: 63  APPNSEAFAPVPSSGEFVGKSSSNSVRFRSGITICGVGLVSL 104

BLAST of CmUC05G094060 vs. NCBI nr
Match: KAF5479257.1 (hypothetical protein F2P56_000093, partial [Juglans regia])

HSP 1 Score: 63.5 bits (153), Expect = 1.2e-06
Identity = 49/111 (44.14%), Postives = 60/111 (54.05%), Query Frame = 0

Query: 4   TAVCFCVALSLATFFALS--PVAVS--SISASPPVSPHRTYQNMSSFFPSVDEHSSPISA 63
           T   FC ALS+A  FA+S  P + S  +ISASP V P+ T  NMSSFFPS      P SA
Sbjct: 9   TITNFCAALSVAIIFAISNAPSSTSEPTISASPSVLPYVTAPNMSSFFPSPSAQGPPNSA 68

Query: 64  DP------ASAPGSGEFMGKSGSSDVKLNHGVSAFGLSICSLFSLRVFLSV 105
            P      A  P SGEF+GKS S   +L+ G    G  + S+F  R+   V
Sbjct: 69  TPPNSETLAPVPSSGEFVGKSSSDSTRLDSGTFISGFGLVSMFVTRLIFVV 119

BLAST of CmUC05G094060 vs. NCBI nr
Match: KAG6621778.1 (hypothetical protein I3842_Q002500 [Carya illinoinensis])

HSP 1 Score: 62.0 bits (149), Expect = 3.5e-06
Identity = 46/111 (41.44%), Postives = 58/111 (52.25%), Query Frame = 0

Query: 4   TAVCFCVALSLATFFALSPVAVS----SISASPPVSPHRTYQNMSSFFPSVDEHSSPISA 63
           T   FC A+S+A  FA+S    S    +ISASP V P+ T  NMSSFFPS      P S 
Sbjct: 3   TITNFCAAVSVAIIFAISHATSSTSEPTISASPSVLPYVTAPNMSSFFPSPSVQGPPSST 62

Query: 64  DP------ASAPGSGEFMGKSGSSDVKLNHGVSAFGLSICSLFSLRVFLSV 105
            P      A  P SGEF+GKS S   +L+ G+   G  + S+F   + L V
Sbjct: 63  TPPNSETLAPVPSSGEFVGKSSSDSTRLDSGILISGFGLVSMFMTSLILVV 113

BLAST of CmUC05G094060 vs. ExPASy TrEMBL
Match: A0A6J1F8A3 (uncharacterized protein LOC111441775 OS=Cucurbita moschata OX=3662 GN=LOC111441775 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.1e-26
Identity = 81/109 (74.31%), Postives = 89/109 (81.65%), Query Frame = 0

Query: 1   MATTAVC-FCVALSLATFFALSPVAVSSISASPPVSPHRTYQNMSSFFPS-VDEHSSPIS 60
           MAT A   FCVALSLA FFA+SP AVS+ISASPPV PHR  QNMSSFFPS VD  SSPIS
Sbjct: 1   MATAAAAFFCVALSLAAFFAVSPAAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPIS 60

Query: 61  ADPASAPG--SGEFMGK-SGSSDVKLNHGVSAFGLSICSLFSLRVFLSV 105
           A PA A    SGEF+GK SGS+ VKLNHG+SAFGLSICS+FSLR+FL+V
Sbjct: 61  AAPAPATALESGEFIGKRSGSNSVKLNHGISAFGLSICSVFSLRLFLNV 109

BLAST of CmUC05G094060 vs. ExPASy TrEMBL
Match: A0A6J1J7U9 (uncharacterized protein LOC111482150 OS=Cucurbita maxima OX=3661 GN=LOC111482150 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 8.1e-25
Identity = 77/105 (73.33%), Postives = 84/105 (80.00%), Query Frame = 0

Query: 2   ATTAVCFCVALSLATFFALSPVAVSSISASPPVSPHRTYQNMSSFFPS-VDEHSSPISAD 61
           A  A  FCVALSLAT FALSP AVS+ISASPPV PHR  QNMSSFFPS VD  SSPISA 
Sbjct: 8   AAAASFFCVALSLATLFALSPSAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISAA 67

Query: 62  PASAPGSGEFMGK-SGSSDVKLNHGVSAFGLSICSLFSLRVFLSV 105
           PA    SGEF+GK SGS+ VKLNHG+SAFGLSICS+F LR+ L+V
Sbjct: 68  PALE--SGEFIGKRSGSNSVKLNHGISAFGLSICSVFGLRLVLNV 110

BLAST of CmUC05G094060 vs. ExPASy TrEMBL
Match: A0A5N6QUU6 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_007173 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.1e-08
Identity = 46/102 (45.10%), Postives = 60/102 (58.82%), Query Frame = 0

Query: 4   TAVCFCVALSLATFFAL----SPVAVSSISASPPVSPHRTYQNMSSFFPSVDEHSSPISA 63
           T+  FC ALS+A FFA+    S     +ISASP V+P+ T  NMSSFFPS  +   P SA
Sbjct: 3   TSTKFCAALSMAIFFAILHGRSSTCEPTISASPAVTPYITSPNMSSFFPSPSDQRPPSSA 62

Query: 64  DP------ASAPGSGEFMGKSGSSDVKLNHGVSAFGLSICSL 96
            P      A  P SGEF+GKS S+ V+   G++  G+ + SL
Sbjct: 63  APPNSEAFAPVPSSGEFVGKSSSNSVRFRSGITICGVGLVSL 104

BLAST of CmUC05G094060 vs. ExPASy TrEMBL
Match: A0A7N2KYA4 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-04
Identity = 38/98 (38.78%), Postives = 56/98 (57.14%), Query Frame = 0

Query: 9   CVALSLATFFAL----SPVAVSSISASPPVSPHRTYQNMSSFF------PSVDEHSSPIS 68
           C AL +   FA+    S  +  +ISASP VSP+ T  NMSSFF      P +   ++P S
Sbjct: 8   CAALFMVICFAILHAPSSTSEPTISASPSVSPYVTPPNMSSFFHSPSAQPPLSSAAAPHS 67

Query: 69  ADPASAPGSGEFMGKSGSSDVKLNHGVSAFGLSICSLF 97
                 P SGEF+G+S S+  +L++G++ FG+ +  LF
Sbjct: 68  KPITPVPSSGEFVGRSSSNSARLDNGITIFGVGLVCLF 105

BLAST of CmUC05G094060 vs. ExPASy TrEMBL
Match: A0A2N9I0C8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46014 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.7e-04
Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = 0

Query: 9   CVALSLATFFAL----SPVAVSSISASPPVSPHRTYQNMSSFF--PSVDEHSSPISADPA 68
           C ALS+   FA+    S  +  +ISASP VSP+ T  NMSSFF  PSV    S  +A  +
Sbjct: 8   CAALSIVICFAILYAPSSTSEPTISASPAVSPYVTAPNMSSFFNSPSVQRPLSSAAAPHS 67

Query: 69  SA----PGSGEFMGKSGSSDVKLNHGVSAFGLSICSLFSLRV 101
            A    P SGEF+G+S S+  + + G++ FG+ +  LF  R+
Sbjct: 68  EAITPVPRSGEFVGRSSSNSARSDLGITIFGVGLVCLFVTRL 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022934640.12.3e-2674.31uncharacterized protein LOC111441775 [Cucurbita moschata][more]
XP_022983589.11.7e-2473.33uncharacterized protein LOC111482150 [Cucurbita maxima][more]
KAE8021266.16.4e-0845.10hypothetical protein FH972_007173 [Carpinus fangiana][more]
KAF5479257.11.2e-0644.14hypothetical protein F2P56_000093, partial [Juglans regia][more]
KAG6621778.13.5e-0641.44hypothetical protein I3842_Q002500 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1F8A31.1e-2674.31uncharacterized protein LOC111441775 OS=Cucurbita moschata OX=3662 GN=LOC1114417... [more]
A0A6J1J7U98.1e-2573.33uncharacterized protein LOC111482150 OS=Cucurbita maxima OX=3661 GN=LOC111482150... [more]
A0A5N6QUU63.1e-0845.10Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_007173 PE=4 SV=1[more]
A0A7N2KYA41.6e-0438.78Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A2N9I0C82.7e-0441.18Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46014 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..76

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC05G094060.1CmUC05G094060.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane