CmUC05G093180 (gene) Watermelon (USVL531) v1

Overview
NameCmUC05G093180
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionReverse transcriptase domain-containing protein
LocationCmU531Chr05: 13572374 .. 13575054 (-)
RNA-Seq ExpressionCmUC05G093180
SyntenyCmUC05G093180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATCAAGCTTACCAGTTCGTGGAGTGAGGAAAGAATTGAGTAGAAGGGTGAAGCTTTCTGCTTGCTAGGGTGGGAGGTTTAATTGAAAATTAAGGAGATTTTATGATTTACGAAGGAGGAGATGAATGTAGAAAGAGAGTGCAATTGAGAGGGAGGGGAGATAAGTACAAAGAGATGCTTGAAATTTCAGCATACTCAGATTTATTTTTTTGGATATTTGTAAAAGATAGCAAAATAAGGGTTTAGGGTTACTGAATCTACCTTCGTTTTCGGGAGAATGATTACTAATAATGCTATTTTGGGTTTTGAATGTTTACATGCTATTAGTAGCAAATGAGTTGGGAAAGACGAGTGGGTGGCTCTTAAACTGGACATGAGCAAAGCCTATGATAAGGTCGAATGGCTGTTTTTGCGAGCTATGCTCTTTATTGGCCTTGACAGGGCGTGGGTCAGGATGCTCATGAGGTGTGTGGAAACGGTCAAATTTTCTGTCCTCATCAATGGTAAGCCCCATCACGAGTTTGTTCCTCAAAGAGGTCTTCGCCAAGGGGACCCTCTATCTCCCTATTTGTTCCTCATTTGCACGGAAGGTTTGTCGGCTCTTCTGCACAGAAAAGAAGCTGTATCTCTTATTCATGGTATTCGTTTAAATAGACATTGCCTGTCCCTTTCTCACCTTTTTTTTTTGCAGATGACAACTTGATTTTCTTTAAAGCGTCGATTTTCGAGAGCAGGAATATTCGCAAAATTTTGCAAGAGTATGAAGAAGTGTCGGGCCAAATGATCAACATGGATAAGTCTAAATGTCTCTTTAGTAAGAATGTTAGGCAACAGTTGGTGTTTGAAATCAGTAATGTCCTAGGAGTGCGAAAACTAACTCTTTAGGGATCTATTTGGTCGGTTCATAATCGTAAGAACAAATCTCGTCTGTTTAACAGGCTGAAGGAAAGAGTCTTGAAGGTTTTGCAAGGTTGGAAAGAGAAGCTCTTCTCCTTTAGTGGCAAAGAGACTTTGATTAAGGCTATAGCCCAAGCAATCCCCACCTATACAATGAGCTGTTTCAAGCTTCCCCGAACAGTTTGTGATGATTTGAATAGGGCATGTGCTCGTTTCTGGTGGGGGTCTTTTGGGGATAAAAAGAAAATGCACTGGATGAGCTGGAATAAGCTTTGTGTCAGCAAGGATGCTGGGGGTCTTGGTTTTCGAGATATCTAGTTATTCAACCAGGTTATGCTTGCTAAATAAAGTCGGAGAATAGTTAAAAATCCTAACAGCCTGCTTGCGCGTGTTCTCAAAGGCCGATATTTTAAGGATGATGATTTTGGTAATGCCTTGTTGGGGAGCAATCCCTCCCTCACTTGGAGGGGTATTCTGTGGGGGAGGGAGTTGTTCCTCAAAGGCTATAGATGGAAGGTGGAAAAAGGGAATTATGTGAGTGTTTTTCATGACCCGTGATTTCCGGAGGTTGGCCATATGACCCCTATTTGCACAAATGGGAATTTGGCCTCGATGAGGGTTCGAGATATTATTAACAGTGATGGAAGTTGGAATTCTGAGTTGATTCATAACATTTTCCTCCCCGATGATGCAAAGTCCATTCTTAGTGTGCCTTACGGGGTACCGGGGGAGCGGATGAGATCATTTGGGGTCTCGACCCAAATGGCTATTTCTCTGTTAAAAGTGCGTACAAGTTAGCGGTGAACTTAAAAGCGTCGCTTGGAGATTCTAGTTCTGAGCTTCTGAAAAATAAGCCCTTCTGGAAATCTGCATGGAGGCTTTGGCTTCCCCCAAGGGTGAAAATGTTGGTGTGGAAGTCCATTACCGATTCCCTGCCCGCTCTAAGTAACATAACAAAGAAAGGAATTGCTATTAACCCTGTTTGTTCTTTTTGCAGGAAATTTGTGGAATCGTTGAGCCATGTGTTGTGAGGGTGTAAATTTACTAAAAGCATTTGGCCTTCTATTTTTCCGTCCTTAGCTAGTTTTCTTTCTGAGTTTAGGGACTGTTGGAGCCCAACAGACTGTTGGGATAGAGTGTTGATGAAGTTGTCTAGTACGGATCGAGATAATGCCGCTATCCTTCTTTGGGATGTCTGGAACTACAGGAACTGTTTGCTGCATACTGGCAACTCCCCGGTGCACAATGTTTTGGTTGGCAAGATCTCTGTGCATGTCGAGGAGTTTTGTGGGGAAATGGCGCTAAGTAGGTGTCTCTTTGGAGAGAGTTGCTGGGGGGCCAGGAGGTGTGGGTGCCGCCTGTTTTGGGCTCTTGGAAGATCAACACCGATGCCTCGTGGTCTGAGCTTGAAGAGGCGGGTGGGATTAGTTGGGTAGTTCGTGACTCGTTTGGCTCGGTCATCCTAGCTAGGTGTGAGAATGTGGCCCTCTTCTGGTCCATTAAGTTCCTTGAGGCCTTGGCGATGATTAGAGGTTTGAAACCTCTCGTTAACTATTTCGCTCAAGGTCTCCTTCCCTTTGTTTCGGTGGAGTCTGATTGTGTGAACCTTATCAATGCTATTAATCATAAAACTCCGGACCTGTCGGAATTGGAGAGTTTTGTTGAGGAGATTGGGTCTTTGGCTGCTTCTGCTCATGTGGTTTTCTTTCGTTGGTGTATGCGGTCGGCAAATGGGTTGGCTCATCGCTTGGCTAGTGCGGCGGTGCTGAGTGGTGACTAG

mRNA sequence

ATGAGATCAAGCTTACCAGTTCGTGGAGTGAGGAAAGAATTGAGTAGAAGGTGTGCCTTACGGGGTACCGGGGGAGCGGATGAGATCATTTGGGGTCTCGACCCAAATGGCTATTTCTCTGTTAAAAGTGCGTACAAGTTAGCGGTGAACTTAAAAGCGTCGCTTGGAGATTCTAGTTCTGAGCTTCTGAAAAATAAGCCCTTCTGGAAATCTGCATGGAGGCTTTGGCTTCCCCCAAGGGTGAAAATGTTGGTGTGGAAGTCCATTACCGATTCCCTGCCCGCTCTAAGTAACATAACAAAGAAAGGAATTGCTATTAACCCTGAAATTTGTGGAATCGTTGAGCCATGTGTTGTGAGGGTGGACTGTTGGAGCCCAACAGACTGTTGGGATAGAGTGTTGATGAAGTTGTCTAGTACGGATCGAGATAATGCCGCTATCCTTCTTTGGGATGTCTGGAACTACAGGAACTGTTTGCTGCATACTGGCAACTCCCCGGTGCACAATGTTTTGGTTGGCAAGATCTCTGTGCATGTCGAGGAGTTTTGTGGGGAAATGGCGCTAAGTAGAGAGTTGCTGGGGGGCCAGGAGGTGTGGGTGCCGCCTGTTTTGGGCTCTTGGAAGATCAACACCGATGCCTCGTGGTCTGAGCTTGAAGAGGCGGGTGGGATTAGTTGGGTAGTTCGTGACTCGTTTGGCTCGGTCATCCTAGCTAGGTGTGAGAATGTGGCCCTCTTCTGGTCCATTAAGTTCCTTGAGGCCTTGGCGATGATTAGAGGTTTGAAACCTCTCGTTAACTATTTCGCTCAAGGTCTCCTTCCCTTTGTTTCGGTGGAGTCTGATTGTGTGAACCTTATCAATGCTATTAATCATAAAACTCCGGACCTGTCGGAATTGGAGAGTTTTGTTGAGGAGATTGGGTCTTTGGCTGCTTCTGCTCATGTGGTTTTCTTTCGTTGGTGTATGCGGTCGGCAAATGGGTTGGCTCATCGCTTGGCTAGTGCGGCGGTGCTGAGTGGTGACTAG

Coding sequence (CDS)

ATGAGATCAAGCTTACCAGTTCGTGGAGTGAGGAAAGAATTGAGTAGAAGGTGTGCCTTACGGGGTACCGGGGGAGCGGATGAGATCATTTGGGGTCTCGACCCAAATGGCTATTTCTCTGTTAAAAGTGCGTACAAGTTAGCGGTGAACTTAAAAGCGTCGCTTGGAGATTCTAGTTCTGAGCTTCTGAAAAATAAGCCCTTCTGGAAATCTGCATGGAGGCTTTGGCTTCCCCCAAGGGTGAAAATGTTGGTGTGGAAGTCCATTACCGATTCCCTGCCCGCTCTAAGTAACATAACAAAGAAAGGAATTGCTATTAACCCTGAAATTTGTGGAATCGTTGAGCCATGTGTTGTGAGGGTGGACTGTTGGAGCCCAACAGACTGTTGGGATAGAGTGTTGATGAAGTTGTCTAGTACGGATCGAGATAATGCCGCTATCCTTCTTTGGGATGTCTGGAACTACAGGAACTGTTTGCTGCATACTGGCAACTCCCCGGTGCACAATGTTTTGGTTGGCAAGATCTCTGTGCATGTCGAGGAGTTTTGTGGGGAAATGGCGCTAAGTAGAGAGTTGCTGGGGGGCCAGGAGGTGTGGGTGCCGCCTGTTTTGGGCTCTTGGAAGATCAACACCGATGCCTCGTGGTCTGAGCTTGAAGAGGCGGGTGGGATTAGTTGGGTAGTTCGTGACTCGTTTGGCTCGGTCATCCTAGCTAGGTGTGAGAATGTGGCCCTCTTCTGGTCCATTAAGTTCCTTGAGGCCTTGGCGATGATTAGAGGTTTGAAACCTCTCGTTAACTATTTCGCTCAAGGTCTCCTTCCCTTTGTTTCGGTGGAGTCTGATTGTGTGAACCTTATCAATGCTATTAATCATAAAACTCCGGACCTGTCGGAATTGGAGAGTTTTGTTGAGGAGATTGGGTCTTTGGCTGCTTCTGCTCATGTGGTTTTCTTTCGTTGGTGTATGCGGTCGGCAAATGGGTTGGCTCATCGCTTGGCTAGTGCGGCGGTGCTGAGTGGTGACTAG

Protein sequence

MRSSLPVRGVRKELSRRCALRGTGGADEIIWGLDPNGYFSVKSAYKLAVNLKASLGDSSSELLKNKPFWKSAWRLWLPPRVKMLVWKSITDSLPALSNITKKGIAINPEICGIVEPCVVRVDCWSPTDCWDRVLMKLSSTDRDNAAILLWDVWNYRNCLLHTGNSPVHNVLVGKISVHVEEFCGEMALSRELLGGQEVWVPPVLGSWKINTDASWSELEEAGGISWVVRDSFGSVILARCENVALFWSIKFLEALAMIRGLKPLVNYFAQGLLPFVSVESDCVNLINAINHKTPDLSELESFVEEIGSLAASAHVVFFRWCMRSANGLAHRLASAAVLSGD
Homology
BLAST of CmUC05G093180 vs. NCBI nr
Match: TXG50387.1 (hypothetical protein EZV62_022911 [Acer yangbiense])

HSP 1 Score: 134.8 bits (338), Expect = 1.4e-27
Identity = 87/337 (25.82%), Postives = 158/337 (46.88%), Query Frame = 0

Query: 27  DEIIWGLDPNGYFSVKSAYKLAVNLKASLGDSSSELLKNKPFWKSAWRLWLPPRVKMLVW 86
           D + W  D  G+++V+S YK+A++LK  +G SS +L    P+W+  W+  +P + K+  W
Sbjct: 78  DSLCWHFDKRGFYTVRSGYKVALDLKKGIGSSSMQL---SPWWRFLWKCNIPNKCKIFFW 137

Query: 87  KSITDSLPALSNITKKGIAINP--EICGIVEPCVVRV--DCWSPTDCW-----DRVLMKL 146
           K+    LP  + + ++ + +    ++C      +  +   C S  + W     D V+ ++
Sbjct: 138 KAFNGWLPTFATLARRRVDVVDYCQVCNDDSESITHILWSCNSAVEVWRQLLGDDVIQRI 197

Query: 147 SSTDRDNAAILL----------------WDVWNYRNCLLHTGNSPVHNVLVGKISVHVEE 206
             +D  +  + L                W +W  RN ++H         +V  I     E
Sbjct: 198 VVSDFPSIILSLWRSVDSVVFNLLIIGYWRLWTNRNSVVHGSAGWAAADMVTWIDNFANE 257

Query: 207 FCGEMALS-RELLGGQEVWVPPVLGSWKINTDASWSELEEAGGISWVVRDSFGSVILARC 266
           F     L+ +E+L  Q  W  P  G +KIN DAS+       G+  ++RD  GS I AR 
Sbjct: 258 FRLANELNHKEVLSHQPSWKTPKRGEFKINCDASFQLRSGKAGVGVIIRDYKGSAIAARS 317

Query: 267 ENVALFWSIKFLEALAMIRGLKPLVNYFAQGLLPFVSVESDCVNLINAINHKTPDLSELE 326
             V    S++ LEA A + G+   ++    G++    +ESD  ++I  ++ +T   +EL 
Sbjct: 318 SPVLCCSSVEMLEAQACLEGIHLAIDIGVSGVI----IESDAASVIQLLSDQTVPRTELG 377

Query: 327 SFVEEIGSLAASAHVVFFRWCMRSANGLAHRLASAAV 338
           + +    +L AS +++ +    R AN +AH +A  A+
Sbjct: 378 AIIHTSLALGASVNLLSYVAVRREANSVAHCIAQHAL 407

BLAST of CmUC05G093180 vs. NCBI nr
Match: XP_030926547.1 (uncharacterized protein LOC115953156 [Quercus lobata])

HSP 1 Score: 132.5 bits (332), Expect = 6.9e-27
Identity = 107/345 (31.01%), Postives = 166/345 (48.12%), Query Frame = 0

Query: 28  EIIWGLDPNGYFSVKSAYKLAVNLKAS--LGDSSSELLKNKPFWKSAWRLWLPPRVKMLV 87
           +IIW  +  G FSVKSAY +A  L  +   G+SS+     KP WK  W L LP ++K+  
Sbjct: 198 KIIWIGNRRGEFSVKSAYHVAHGLMGANDCGESSNG-DPCKPLWKRLWHLHLPTKIKVFA 257

Query: 88  WKSITDSLPALSNITKKGIAINP--EICG----IVEPCVVRVDCWSPT-DCW-------- 147
           W++  + LP +  I ++GI+ N    +CG     V+  ++R D  S   D W        
Sbjct: 258 WRACVNGLPTMEAIYRRGISQNMACPVCGNDAESVDHALLRCDFSSLVWDFWLENPLHTQ 317

Query: 148 -------DRVLMKLSSTDRDNAAILL---WDVWNYRNCLLHT--GNSPVHNVLVGKISVH 207
                  D  L  LS +   +  I     W +W+ RN +LH   G SP+H  +  +    
Sbjct: 318 GFKNSFLDSALFILSHSTLQDLEIFFATAWAIWSNRNNILHKDGGLSPLH--VWHRARNV 377

Query: 208 VEEFCGEMALSRELL-GGQEVWVPPVLGSWKINTDASWSELEEAGGISWVVRDSFGSVIL 267
           VEEF    +   +L+      W PP  G++K+N D + SE E +  +  V+RDS G V+ 
Sbjct: 378 VEEFTCSASWDFDLVRPASSSWSPPPPGAFKVNVDGASSEQEGSSSMGVVIRDSNGQVVA 437

Query: 268 ARCENVALFWSIKFLEALAMIRGLKPLVNYFAQGL-LPFVSVESDCVNLINAINHKTPDL 327
           A C  +  ++S +  E  A+ +G+      FAQ L LP + VESD + +I A+N K    
Sbjct: 438 ALCLPLQSYFSAELSEVFALEQGV-----LFAQELQLPRIIVESDALTVIQAVNDKATG- 497

Query: 328 SELESFVEEIGSLAASAHVVFFRWCMRSANGLAHRLASAAVLSGD 342
           S     ++ I  +  S     F++  R  N +A+ LA  A  +G+
Sbjct: 498 SIFGHLIQGIHQVCESFESCHFKYLSRRYNSVAYELAQHARRTGN 533

BLAST of CmUC05G093180 vs. NCBI nr
Match: GAY61101.1 (hypothetical protein CUMW_207140, partial [Citrus unshiu])

HSP 1 Score: 129.0 bits (323), Expect = 7.6e-26
Identity = 97/336 (28.87%), Postives = 151/336 (44.94%), Query Frame = 0

Query: 27  DEIIWGLDPNGYFSVKSAYKLAVNLKASLGDSSSELLKNKPFWKSAWRLWLPPRVKMLVW 86
           DE+IW    +G ++VKS Y+ A+N++     SSSE  KN+  W   W L LP ++++ VW
Sbjct: 110 DELIWHFGKSGQYTVKSGYQTALNIRFPAMPSSSEFSKNE--WNIIWSLALPKKIRIFVW 169

Query: 87  KSITDSLPALSNITKKGIAINP--EIC--GIVEPCVVRVDCWSPTDCW------------ 146
           ++  + LP+  N+ K+ I   P  ++C  GI       VDC +    W            
Sbjct: 170 RAAKNLLPSDENLWKRKIVQEPTCQLCKMGIENVFHALVDCKAAKKVWRLSLFDNDIQAA 229

Query: 147 ---------DRVLMKLSSTDRDNAAILLWDVWNYRNCLLHTGNSPVHNVLVGKISVHVEE 206
                      V    S+ D D  A +LW  WN RN  L  G       +V K    +E 
Sbjct: 230 PGQDILSLLHGVKRMRSNADVDLFAAMLWAKWNARNQWLFKGKRENPQSVVAKAEAVMEA 289

Query: 207 FCGEMALSRELLGGQEVWVPPVLGSWKINTDASWSELEEAGGISWVVRDSFGSVILARCE 266
           +      + ++   Q  W PP  G  KINTDA+ +  +   G+  V+RD  G V     +
Sbjct: 290 YKRVQPSADKV--AQLGWNPPQEGFVKINTDAATNSEKNLAGLGAVIRDENGQVTATAIK 349

Query: 267 NVALFWSIKFLEALAMIRGLKPLVNYFAQGLLPFVSVESDCVNLINAINHKTPDLSELES 326
                 S+ + EA AM  GL+   +   + ++    +ESD   +++ +N++    SE+  
Sbjct: 350 VSKFHGSVAYAEAEAMEWGLQVAKDAHVKDVI----MESDSQEVVSLVNNRQGSRSEIYW 409

Query: 327 FVEEIGSLAASAHVVFFRWCMRSANGLAHRLASAAV 338
            V EI  L  S   V   +  RS N +AH LA  A+
Sbjct: 410 VVLEIQKLKESFDHVSCVYTHRSCNAIAHSLAKLAL 437

BLAST of CmUC05G093180 vs. NCBI nr
Match: XP_024956542.1 (uncharacterized protein LOC112498908 [Citrus sinensis])

HSP 1 Score: 129.0 bits (323), Expect = 7.6e-26
Identity = 95/341 (27.86%), Postives = 153/341 (44.87%), Query Frame = 0

Query: 27   DEIIWGLDPNGYFSVKSAYKLAVNLKASLGDSSSELLKNKPFWKSAWRLWLPPRVKMLVW 86
            DE+IW    +G ++VKS Y+ A+ ++     SSSE  KN+  W   W L LP ++++ VW
Sbjct: 769  DELIWHFGKSGQYTVKSGYQRALKIRFPAMPSSSESSKNE--WNIIWSLALPKKIRIFVW 828

Query: 87   KSITDSLPALSNITKKGIAINP--EIC--GIVEPCVVRVDCWSPTDCWDRVLMKL----- 146
            ++  + LP+  N+ K+ I   P  ++C  GI       VDC +    W   L  +     
Sbjct: 829  RAAKNLLPSAENLWKRKIVQEPTCQLCKMGIENVFHALVDCKAAKKVWRLSLFYIDIQAA 888

Query: 147  ----------------SSTDRDNAAILLWDVWNYRNCLLHTGNSPVHNVLVGKISVHVEE 206
                            S+ D D  A++LW  WN RN  L  G       +V K    +E 
Sbjct: 889  PGQDILSLLHGVKRMRSNADVDLFAVMLWAKWNARNQWLFKGKRENPQSVVAKAEAVMEA 948

Query: 207  F-----CGEMALSRELLGGQEVWVPPVLGSWKINTDASWSELEEAGGISWVVRDSFGSVI 266
            +       +++  ++    Q  W PP  G  KINTDA+ +  +   G+  V+RD  G V 
Sbjct: 949  YKRVQPSADVSHGKQQKVAQLGWNPPQEGFVKINTDAATNSEKNLAGLGAVIRDENGQVT 1008

Query: 267  LARCENVALFWSIKFLEALAMIRGLKPLVNYFAQGLLPFVSVESDCVNLINAINHKTPDL 326
                +      S+ + EA AM  GL+   +   + ++    +ESD   +++ +N++    
Sbjct: 1009 ATAIKVSKFHGSVAYAEAEAMEWGLQVAKDAHVKDVI----MESDSQEVVSLVNNRQGSR 1068

Query: 327  SELESFVEEIGSLAASAHVVFFRWCMRSANGLAHRLASAAV 338
            SE+   V EI  L  S   V   +  RS N +AH L   A+
Sbjct: 1069 SEIYWVVLEIQKLKESFDHVSCVYTHRSCNAIAHSLVKIAL 1103

BLAST of CmUC05G093180 vs. NCBI nr
Match: XP_030924745.1 (uncharacterized protein LOC115951731 [Quercus lobata])

HSP 1 Score: 127.9 bits (320), Expect = 1.7e-25
Identity = 99/344 (28.78%), Postives = 154/344 (44.77%), Query Frame = 0

Query: 27   DEIIWGLDPNGYFSVKSAYKLAVNLKASLGDSSSELLKNKPFWKSAWRLWLPPRVKMLVW 86
            D IIW L P+G F+ KSAYKL V   A+    +S  +  + FW+  W+L +P ++K   W
Sbjct: 950  DRIIWSLTPSGMFTTKSAYKLLVTRNATNHAGTSSPVNQRQFWRKLWQLRVPNKLKHFAW 1009

Query: 87   KSITDSLPALSNITKKGIAINPEICGIVE-----------PCVVRVDCWSP--------- 146
            ++  D+LP LSN+ ++ IA N EIC   +            C      WSP         
Sbjct: 1010 RACNDALPTLSNLVRRHIATN-EICSACQAQPEDTLHALWSCSTLESVWSPLSWSQPYAN 1069

Query: 147  --TDCWDRVLMKLSSTDRDNAA----ILLWDVWNYRNCL-LHTGNSPVHNV--LVGKISV 206
              T  +  +L K      D  +     + W +WN RN L L+    P++++  L G    
Sbjct: 1070 SHTSSFQGLLDKFMQVKEDYRSEIFITIAWMLWNRRNALRLNLTVQPINHISSLAGS--- 1129

Query: 207  HVEEFCGEMALSRELLG--GQEVWVPPVLGSWKINTDASWSELEEAGGISWVVRDSFGSV 266
            +++EF   +     ++     + W PP   S+K N DA+  +     GI  ++RD  G  
Sbjct: 1130 YLQEFLDTLDQIPVVMDHPSPQQWQPPDESSFKANFDAAVFKNSNHAGIGVIIRDWRGEA 1189

Query: 267  ILARCENVALFWSIKFLEALAMIRGLKPLVNYFAQGLLPFVSVESDCVNLINAINHKTPD 326
            + A   +V    S+  LEALA  R ++  V    Q     V  E D + +I AI+ +T D
Sbjct: 1190 VGALSMSVPATQSVMELEALACRRAVQFAVELGLQD----VVFEGDSLQVIQAISQETLD 1249

Query: 327  LSELESFVEEIGSLAASAHVVFFRWCMRSANGLAHRLASAAVLS 340
                   +E+I + AA+     F +  R  N +   LA  A  S
Sbjct: 1250 YLSYGHIIEDIRTQAAAISSHDFIFNTRHCNVVVDALAKKAKFS 1285

BLAST of CmUC05G093180 vs. ExPASy TrEMBL
Match: A0A5B7BI33 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_037968 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.7e-29
Identity = 100/345 (28.99%), Postives = 154/345 (44.64%), Query Frame = 0

Query: 27  DEIIWGLDPNGYFSVKSAYKLAVNLKASLGD----SSSELLKNKPFWKSAWRLWLPPRVK 86
           D +IW    NG +SVKS Y LA NL AS  +     SS ++     WK  W L LP ++K
Sbjct: 9   DRLIWHFSKNGQYSVKSGYHLAANLMASRKNGQQAESSGMISVNKSWKILWSLSLPNKIK 68

Query: 87  MLVWKSITDSLPALSNITKKGIAINPEICGIVE-----PCVVRVDCWSPTDCWDR----- 146
            L+W++  + LP  S +  + + ++P +C + E     P  + + C      WD      
Sbjct: 69  NLIWRAAMNILPTGSRLVDRHVPVDP-LCRLCENGPETPLHLFLHCSWVKLVWDSAKGSF 128

Query: 147 ---------------VLMKLSSTDRDNAAILLWDVWNYRNCLLH--TGNSPVHNVLVGK- 206
                          +  KL S+  +   +++W VW +RN + H   G  P+  V   + 
Sbjct: 129 PDALVHLDFRQFFEYICNKLDSSFIELWCVIIWIVWGHRNAIYHDRQGKDPLRVVFDAQQ 188

Query: 207 --ISVHVEEFCGEMALSRELLGGQEVWVPPVLGSWKINTDASWSELEEAGGISWVVRDSF 266
                H  +    +  S     G  VW PP    +K+N D SW     +GGI  V+RDS 
Sbjct: 189 YLNEYHEAQHRLHIPPSVSSRAGSSVWSPPPEDLFKLNVDGSWVPGSFSGGIGGVIRDSR 248

Query: 267 GSVILARCENVALFWSIKFLEALAMIRGLKPLVNYFAQGL-LPFVSVESDCVNLINAINH 326
           G VI    + +    S  + EA AM  G+      FA+ + +  V +ESDC++L+N++  
Sbjct: 249 GLVIAGFAKPLKWCGSADYAEACAMFFGVA-----FAKEIGIVDVLIESDCLSLVNSVGC 308

Query: 327 KTPDLSELESFVEEIGSLAASAHVVFFRWCMRSANGLAHRLASAA 337
            +PD S +    ++I            R   RSAN  AH +AS A
Sbjct: 309 SSPDFSHIGHITDDIRRGMVGLRSFQVRHVRRSANQTAHEIASFA 347

BLAST of CmUC05G093180 vs. ExPASy TrEMBL
Match: A0A803P3J1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.4e-28
Identity = 103/367 (28.07%), Postives = 169/367 (46.05%), Query Frame = 0

Query: 12   KELSRRCALRGTGGADEIIWGLDPNGYFSVKSAYKLAVNLKASLGDSSSELLKNKPFWKS 71
            + L R+  L     +D + W  +PNG +SV+SAY L   LK    D ++       FWKS
Sbjct: 1343 QRLIRQIPLNINHNSDSLCWFNEPNGMYSVRSAYTLQQKLKGLGNDVAA-----SEFWKS 1402

Query: 72   AWRLWLPPRVKMLVWKSITDSLPALSNITKKGIAINP--EICGIVEPCVVRV--DCWSPT 131
             W L LPP++K L+W++ ++ LP LS +  K + ++    +C  ++  +  V   C   T
Sbjct: 1403 LWALQLPPKIKNLMWRAGSNCLPTLSQLASKHVPVSTLCPLCEEMDETIAHVLLTCRVVT 1462

Query: 132  DCWDR--------------------VLMKLSSTDRDNAAILLWDVWNYRNCLLHTGNSPV 191
              W+R                    V   LS+  +  AA L W VW  RN ++  G S  
Sbjct: 1463 KVWERVGIGTTVTAAGGIFLDWCVSVFTHLSAEKQGLAAALCWAVWGARNDVVWQGKSFN 1522

Query: 192  HNVLVGKISVHVEEFCGEMALSRELL-------GGQEVWVPPVLGSWKINTDASWSELEE 251
             + +V     +++++        E L        G E W+ P + S KIN DA+  E + 
Sbjct: 1523 FSSIVASAKSYLDQWKHAQKTQIESLWSDLQDYDGMERWIKPQINSIKINVDAAIFEGQN 1582

Query: 252  AGGISWVVRDSFGSVILARCE----NVA--LFWSIKFLEALAMIRGLKPLVNYFAQGLLP 311
              G + VVRD  G +I  R +    N+A  +  ++ F EAL+ I+               
Sbjct: 1583 RFGSALVVRDHHGMLIECRTKLHVGNIAPSIAEALSFREALSWIK----------DQTYN 1642

Query: 312  FVSVESDCVNLINAINHKTPDLSELESFVEEIGSLAASAHVVFFRWCMRSANGLAHRLAS 342
               VE+DC+ ++ A+ + T   S     +++  ++ AS + V+F +  RSAN +AH  A 
Sbjct: 1643 EAWVETDCLVVVQALRNSTILSSHFGCVIQDCKAMLASLNNVYFCFVKRSANRVAHEFAR 1694

BLAST of CmUC05G093180 vs. ExPASy TrEMBL
Match: A0A5C7H0P0 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022911 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 6.7e-28
Identity = 87/337 (25.82%), Postives = 158/337 (46.88%), Query Frame = 0

Query: 27  DEIIWGLDPNGYFSVKSAYKLAVNLKASLGDSSSELLKNKPFWKSAWRLWLPPRVKMLVW 86
           D + W  D  G+++V+S YK+A++LK  +G SS +L    P+W+  W+  +P + K+  W
Sbjct: 78  DSLCWHFDKRGFYTVRSGYKVALDLKKGIGSSSMQL---SPWWRFLWKCNIPNKCKIFFW 137

Query: 87  KSITDSLPALSNITKKGIAINP--EICGIVEPCVVRV--DCWSPTDCW-----DRVLMKL 146
           K+    LP  + + ++ + +    ++C      +  +   C S  + W     D V+ ++
Sbjct: 138 KAFNGWLPTFATLARRRVDVVDYCQVCNDDSESITHILWSCNSAVEVWRQLLGDDVIQRI 197

Query: 147 SSTDRDNAAILL----------------WDVWNYRNCLLHTGNSPVHNVLVGKISVHVEE 206
             +D  +  + L                W +W  RN ++H         +V  I     E
Sbjct: 198 VVSDFPSIILSLWRSVDSVVFNLLIIGYWRLWTNRNSVVHGSAGWAAADMVTWIDNFANE 257

Query: 207 FCGEMALS-RELLGGQEVWVPPVLGSWKINTDASWSELEEAGGISWVVRDSFGSVILARC 266
           F     L+ +E+L  Q  W  P  G +KIN DAS+       G+  ++RD  GS I AR 
Sbjct: 258 FRLANELNHKEVLSHQPSWKTPKRGEFKINCDASFQLRSGKAGVGVIIRDYKGSAIAARS 317

Query: 267 ENVALFWSIKFLEALAMIRGLKPLVNYFAQGLLPFVSVESDCVNLINAINHKTPDLSELE 326
             V    S++ LEA A + G+   ++    G++    +ESD  ++I  ++ +T   +EL 
Sbjct: 318 SPVLCCSSVEMLEAQACLEGIHLAIDIGVSGVI----IESDAASVIQLLSDQTVPRTELG 377

Query: 327 SFVEEIGSLAASAHVVFFRWCMRSANGLAHRLASAAV 338
           + +    +L AS +++ +    R AN +AH +A  A+
Sbjct: 378 AIIHTSLALGASVNLLSYVAVRREANSVAHCIAQHAL 407

BLAST of CmUC05G093180 vs. ExPASy TrEMBL
Match: A0A803QFA9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 7.5e-27
Identity = 96/353 (27.20%), Postives = 168/353 (47.59%), Query Frame = 0

Query: 26   ADEIIWGLDPNGYFSVKSAYKLAVNLKASLGDSSSELLKNKPFWKSAWRLWLPPRVKMLV 85
            +D + W  + NG +SVKSAY L  NLK +  +S +       FWK+ W L LPP++K L+
Sbjct: 705  SDVLCWSKEVNGMYSVKSAYALQQNLKGTGSESEA-----SDFWKALWSLKLPPKIKNLM 764

Query: 86   WKSITDSLPALSNITKKGIAINPE--ICGIVEPCV--VRVDCWSPTDCWDR--------- 145
            W++ ++ LP LS +  K + +N    +C  ++  +  + + C      W+R         
Sbjct: 765  WRAGSNCLPTLSQLASKRVPVNTRCPLCEEMDETISHILLTCRVVKLAWERVGIGTMVVA 824

Query: 146  -----------VLMKLSSTDRDNAAILLWDVWNYRNCLLHTGNSPVHNVLVGKISVHVEE 205
                       V   L++  +  AA L W +W  RN ++  G   + + ++     ++++
Sbjct: 825  AGSVFMDWCRLVFTPLTAEKQALAAALCWAIWGARNDVVWQGKPFIISTIIVSAKGYLDQ 884

Query: 206  FCGEMALSRELL-------GGQEVWVPPVLGSWKINTDASWSELEEAGGISWVVRDSFGS 265
            +        E L        G E W+ P   S KIN DA+  E +   G + VVRD+ G 
Sbjct: 885  WKFAQKTQIESLWSNLQDCDGMERWIKPQGNSIKINVDAAIFERQNRFGSAMVVRDNNGL 944

Query: 266  VILARCE----NVA--LFWSIKFLEALAMIRGLKPLVNYFAQGLLPFVSVESDCVNLINA 325
            +I  R +    N+A     ++ F EAL+ ++      NY +        VE+DC+ ++ A
Sbjct: 945  LIEGRTKLHNGNIAPTTAEALSFREALSWLKD----QNYTS------AWVETDCLLVVQA 1004

Query: 326  INHKTPDLSELESFVEEIGSLAASAHVVFFRWCMRSANGLAHRLASAAVLSGD 342
            + + T   S+    ++E  ++ A+ + V+F +  RSAN +AH  A A++L  D
Sbjct: 1005 LRNSTTLSSQFGCVIQECKAMLANLNDVYFCFVKRSANRVAHEFARASLLYPD 1042

BLAST of CmUC05G093180 vs. ExPASy TrEMBL
Match: A0A5B7A5C8 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_021401 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 9.7e-27
Identity = 97/346 (28.03%), Postives = 161/346 (46.53%), Query Frame = 0

Query: 27  DEIIWGLDPNGYFSVKSAYKLAVNLKASLGDSSSELLKNK----PFWKSAWRLWLPPRVK 86
           D ++W    +G FSV+SAY +AV++             N+      WK+ W L +P ++K
Sbjct: 226 DCVVWHFSKHGVFSVRSAYPVAVDILKKRNSFEESECSNREIMDKLWKTLWSLSIPNKIK 285

Query: 87  MLVWKSITDSLPALSNITKKGIAIN--PEICG--IVEPCVVRVDCWSPTDCWDRVLMKL- 146
           + +W++I D LP  + + ++ I ++   ++CG     P  +   C      W+  +  L 
Sbjct: 286 IFLWRAIVDILPTGTKLAQRHIPVDFRCKLCGDQAETPVHLFTQCAWVRIVWENFVFHLP 345

Query: 147 ----------------SSTDR---DNAAILLWDVWNYRNCLLHTGNSPVHNVLVGKISVH 206
                           SS D    +   I+LW VW +RN ++H+G       +      +
Sbjct: 346 KDKCFLDFCQLFEFLCSSLDMAEVEVCCIMLWLVWGHRNAIVHSGRGRFPVGVFSDALQY 405

Query: 207 VEEF------CGEMALSRELLGGQEVWVPPVLGSWKINTDASWSELEEAGGISWVVRDSF 266
           ++EF       G + L R +  G   W+PPV G +K+N D SW   E  GG+  V+RD  
Sbjct: 406 LKEFQDAQHKMGVVPL-RPVGVGSASWMPPVDGVYKLNIDGSWLPGENTGGVGGVIRDWK 465

Query: 267 GSVILARCENVALFWSIKFLEALAMIRGLKPLVNYFAQGL-LPFVSVESDCVNLINAINH 326
           G VI    + +    S    +A+A++ G+      FA+ + +  + VE DC+ +I+AI  
Sbjct: 466 GEVIGGFAKPLIQCVSADHAKAMAILHGI-----LFARDIGIQKLVVEGDCLGVISAIRC 525

Query: 327 KTPDLSELESFVEEIGSLAASAHVVFFRW----CMRSANGLAHRLA 334
            + DLS+L   +++I    A     F  W      RSANG+AH LA
Sbjct: 526 ASKDLSDLGHILDDIKDCLA----CFCSWEVAHVRRSANGVAHALA 561

BLAST of CmUC05G093180 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 8.7e-12
Identity = 81/348 (23.28%), Postives = 139/348 (39.94%), Query Frame = 0

Query: 27  DEIIWGLDPNGYFSVKSAYKL---AVNLKASLGDSSSELLKNKPFWKSAWRLWLPPRVKM 86
           D   W    +G ++VKS Y +    +N ++S  + S   L   P ++  W+    P+++ 
Sbjct: 211 DSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSL--NPIYQKIWKSQTSPKIQH 270

Query: 87  LVWKSITDSLP-----ALSNITKKGIAINPEIC-----GIVEPCVVRVDCWSPTDC---- 146
            +WK +++SLP     A  +++K+   I    C      ++  C      W+ +      
Sbjct: 271 FLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWAISSIPIPL 330

Query: 147 ---W-DRVLMKL--------SSTDRDNAA----ILLWDVWNYRNCLLHTGNSPVHNVLVG 206
              W D + + L         +   + A+     LLW +W  RN L+  G       ++ 
Sbjct: 331 GGEWADSIYVNLYWVFNLGNGNPQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLR 390

Query: 207 KISVHVEEF--------CGEMALSRELLGGQEVWVPPVLGSWKINTDASWSELEEAGGIS 266
           +    +EE+        CG          G+  W PP     K NTDA+W+   E  GI 
Sbjct: 391 RAEDDLEEWRIRTEAESCGTKPQVNRSSCGR--WRPPPHQWVKCNTDATWNRDNERCGIG 450

Query: 267 WVVRDSFGSVILARCENVALFWSIKFLEALAMIRGLKPLVNYFAQGLLPFVSVESDCVNL 326
           WV+R+  G V       +    S+   E  AM   +  L  +       +V  ESD   L
Sbjct: 451 WVLRNEKGEVKWMGARALPKLKSVLEAELEAMRWAVLSLSRF----QYNYVIFESDSQVL 510

Query: 327 INAINHKTPDLSELESFVEEIGSLAASAHVVFFRWCMRSANGLAHRLA 334
           I  +N+       L+  ++++  L +    V F +  R  N LA R+A
Sbjct: 511 IEILNN-DEIWPSLKPTIQDLQRLLSQFTEVKFVFIPREGNTLAERVA 549

BLAST of CmUC05G093180 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 49.3 bits (116), Expect = 7.2e-06
Identity = 44/197 (22.34%), Postives = 75/197 (38.07%), Query Frame = 0

Query: 148 LLWDVWNYRNCLLHTGNSPVHNVLVGKISVHVEEFCGEMALSRELLGGQEV-------WV 207
           L+W +W   N L+           V       +E+      + +  G +         W 
Sbjct: 47  LMWRIWKSGNDLVFNHTRTKFQTTVEMALNDTKEWLDNTMTNEQQNGNRNADPSRNTKWS 106

Query: 208 PPVLGSWKINTDASWSELEEAGGISWVVRDSFGSVILARCENVALFWSIKFLEALAMIRG 267
           PP     K N DAS  E     G+ W++R+S G+VI           + +  E   +I  
Sbjct: 107 PPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTLIWA 166

Query: 268 LKPLVNYFAQGLLPFVSVESDCVNLINAINHKTPDLSELESFVEEIGSLAASAHVVFFRW 327
           ++    +  + ++     E D   +   IN K+ +   L+ F++ I S   S   + F +
Sbjct: 167 IQASYGFGHKKVI----FEGDNQTITRMINTKSSN-PRLQHFLDTIQSWIPSFESIEFSF 226

Query: 328 CMRSANGLAHRLASAAV 338
             R  NG A  LA  A+
Sbjct: 227 KHREQNGCADFLAKQAI 238

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TXG50387.11.4e-2725.82hypothetical protein EZV62_022911 [Acer yangbiense][more]
XP_030926547.16.9e-2731.01uncharacterized protein LOC115953156 [Quercus lobata][more]
GAY61101.17.6e-2628.87hypothetical protein CUMW_207140, partial [Citrus unshiu][more]
XP_024956542.17.6e-2627.86uncharacterized protein LOC112498908 [Citrus sinensis][more]
XP_030924745.11.7e-2528.78uncharacterized protein LOC115951731 [Quercus lobata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5B7BI334.7e-2928.99Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_037968... [more]
A0A803P3J11.4e-2828.07Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A5C7H0P06.7e-2825.82Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022911 PE=4 SV=1[more]
A0A803QFA97.5e-2727.20Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A5B7A5C89.7e-2728.03Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_021401 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G29090.18.7e-1223.28Ribonuclease H-like superfamily protein [more]
AT5G65005.17.2e-0622.34Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 206..339
e-value: 2.8E-9
score: 39.0
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 39..112
e-value: 8.2E-8
score: 32.9
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 210..336
e-value: 1.3E-16
score: 60.5
NoneNo IPR availablePANTHERPTHR33033POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 196..336
NoneNo IPR availablePANTHERPTHR33033:SF67SUBFAMILY NOT NAMEDcoord: 196..336
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 209..333
e-value: 7.25816E-15
score: 68.1096
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 206..337

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC05G093180.1CmUC05G093180.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity