CmUC05G091810 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCAATGTTTGTTGAATTTTTTGGCTGTTAGTATTCTCCGTTTCCTCCCTTCACTTCTTCAATCTTCAATCTTCATCTTTCTCTCTGCTTTCAATTCCCTCTATTTCTCTTTCTCTCAAACCCTAATCACATTTCCATGGGAGGATCTAATTCTTCTCGTCGCATTTGTGTTCATCAAGTGCTCGGCGGTGGTCATGGTACTTCCTTCCCCCCTTCTGCTGTGTTTCCTGATCTTTCTATATTCGAATTGGCACTTACATTCATGCTTTAGTATCCCCTCCTCGATCAGAATTTGTCTTTTTGTTTTCTGCATAGGAATTATTTTGGGTCTAATGCCATTTGATCGCAATCCATGTTTGAATTATGTGTTTCATTAAGTTGATTTTTTAAGAAATGCTCCGATCTTCTTTTTTCTTTAATTTGCTGACTTTATTATATTCTATTAAATGTATTGTTGGGTTGCTAATTTTCCTATTGATGATAGTGGCTGATGTGCTGTTATGGAAGAAATGGTGTGGTGGGGTTGTGATCCTAACGTCTGCAACTGCTTTGTGGTACCTGTTTGAAAGAGCCGGTTACAACTTCTTGTCATTTGTTGCCAATGTTCTATTGCTTCTTGTCGTCATTCTTTTTTTCTGGGCCAAATCTGCTACCCTTCTCAATAGGTACTTCGACTCCTTCCTTCTGCCTGCTTTCAGTGCTTAGCAGAGTTTCATTTTATAACCTCCATTTCTTGGGTCGAAGTTTGTGGAGAGCTTATGGGTTTTTTTTATGGATGATGAATCAAAAGTAAATACCATACATTGTAAGAGAGGACTCATTTCATCGTAACCAACCTTCGCATAGGCCGTCAAGCTAAGGAATTACAACCTTGGCATCCATCTCATTCTGTGAGATGGTAGTTCTTAGGATTTCAAATAAATACTACCGTACCAACTTGAACTTCTTTTCGAAGAGAGGAACGTTTTTCTAATTTGTTGTTGGAAAAAAATAACCACGTACATTTTCTGAGGTAATAATTAATATGACTTAGATTTATTTGTTTTAGGCTAGTTCTGATCAAATGTTCACGTTCTCAAGGTTTGAATTGAAATGGACGTAGAGTAAAAGTTACCTTCCTTTGTGATTCAGACCTCTACCTCCGCTTCCTGATCTGGAAATTTCTGAGGAATCTGTTTCTATGGTTGCTGATGAACTGCGATTGTGGATCAATTTTGCACTTTCAATAGCACGTGATATTGCAATAGGCAGAAACCTTAAGCTCTTTCTTCAGGTTAGGGATCATCATTTGTCTTTTTACCCGTGTGATGGCTGGAGCTTGTGTGTTAATTGTTCATGATCTCAGGTTGCTCTTGGACTATGGATTGTGTCATTCATTGGCAGTTTCTTCAACTTTCTTACACTGGTTTATATTGGTGAGTTTTGTGGGGCCTTCTTTTCTTTGTAATCAGAAGTTCAAATATGATAGCTGTTGTTTTCTCAACAGTTTATGCATTTTATCAATATATTTTTGCAGGGGTTCTTCTCAGTCTTTCAGCTCCTATAGTGTATGATAAGTACCAGGATCAGATCAATGAAAAGTTATATGTAACATATAGACATGCACAGATGCAATACAGGAAGCTTGACGAGAATGTTTTAAGGAAGATACCATTACCCTTAAACAAGGAGAAGAAGATGCAATAGGCATAGTACCTCACTTGATGATCAGTAACTACTTCAAAAGAAGTGAGCTGGATTACCTTTTTCATAATGTTCCACTCCATTTTTGTATTTTGATGCGAACCATAGATATTATTTCCGATTAACATAGTGATTATTATGTACTAATATTCTAATGTCTTGTTAAGATCTCTTATTTACTCCTTTTTTTGTATTTTCTTTCCTTTAATTTGAGCATTGATTGATTTCTTTCTTTTGTAATCTAAATGCCACCTACTTCTTGATGAAGGATTGTTAGATCTTGAAATTCGTGAATAAGTTCTGGTATCTATAGCTTCTGAGATTAGTATATTACTTCCTAAGTTTAAATGTTCTACATATTAACATCTCATAAGATTTCACAAATTTCTGATCACTTAGTTTTCAACTTTTTAGAAATATAACAGCTGATGAATCAGTATTAGTATCTTTTTCTTTTACTAAAAAAAAATTGTTTTGGTTGATTAGATACATGCATTAACTAATTACAAAATTCGTTCTATCCCCTCTTGTCCTTGTTTATTGGATAAATAGATTTGCCTCAATTGTTCATCCCCTGCCTTAGCTTTAATCAAGTTAGCTTCCACTATTTAAGAGTTTGTTGATCTTCTTATGGCTCGATGTTACTACTTACCAGTATTTGCCACATCATTTACTGAAATGGTGATCTCATTATAAACCCATTCTAGCAAAACCACCCATCATAGTCATCCTTCCTTAACTATTGATCATTAAGACGTTTTCTTAAAATATCTATATCTAGAAGGAATAATCAGTTATTTGAAGATGAGTGTTCTTCTTTCGAGTCTTTTTGGCTTTAAGTGCAGCATGATGCTTCTTGGTGGTGCACCGTCCACACAAAATTCTTTTGTAGTTAGTTACAATTAGAAGATTCTTCTTTGGTAGATCTTTGTGAAGTGGTTCTCTCTACCCTTGGCTCCTAGGTTGTTCTTTAGTTCTTATAATGAATATACATCTCTATTTCTTGTGAAACTACACACACACACACACATGACATGAATATACATCTCTATTTCTTTAGCTCTTATAATGAATATACATCTTTATTATTATTACTATTATTTTTTCCTAAAATTGTGCTTGTCTATAAAGTTGACTTCTAGCTTTTTGTTCTTGGCCGAAGTAACCAATCTGTCAAATGTGCTTATCTTGTGGTAAAAGATTTAAGATGTGGGTAAATATTATACTGTTCATATAATTCTTAGATGGGCTGCCCTTATCCTTGAGGATGTGCTATACTTCAATGGTTAATCCAATGTAGTTCAACTAATTAATGCTTCATTGGATGTAGGATGATAAGTTTTTGTGTATGGTAAGAAACTTTGCAAATAGAGGTTTATTTATAGGGAATTGAATCTTGCTATACAATGATTTTTTGTTTTTAAAAGACTTAGTTACTGTCTTCTCAATTGAAGAACTTTTGCTTAGTTTCTTTTTCTTTTCCCTCCTGGCCATAACTTCTTCTAGTTTTTTCTTTGTTTCCCCTCTTTAACTTTTATTCTTACTATTGGAGATCCTTATTTTGTTTGTTTTACTTTTCAAGTTTTAGGATTTCAAATTTTTCATCTATTTATCTGATTTGCTTTGGTTTTACTTGTTGCTACTTTGAAGTATGCAGAGGCACATTGGCTGGCTTTCAACAGGATGATCAGTAGATCTGAAGATTTTGATCAGAGGCATTAAGATTGCTTTTAAAAGCGATGTACTTCAGAATTCTAGATCTTTTAGAAAGCTGTGGTATATAGTTTAACATAAATGTATTCTGACTTTGACTTTGGGGTGAAAACTGAAATCAATAGTGTTTGATTTTGGATTGAAATAGTGTGTTGTCTAGCCCGGCTTCCTACTCTGGGTTCTGTAATTTTATTTTTGGCAATTATCCTCTGTTATTTCAACTAAATGAAAATAAAATTTTCGTAG TTTCAATGTTTGTTGAATTTTTTGGCTGTTAGTATTCTCCGTTTCCTCCCTTCACTTCTTCAATCTTCAATCTTCATCTTTCTCTCTGCTTTCAATTCCCTCTATTTCTCTTTCTCTCAAACCCTAATCACATTTCCATGGGAGGATCTAATTCTTCTCGTCGCATTTGTGTTCATCAAGTGCTCGGCGGTGGTCATGTGGCTGATGTGCTGTTATGGAAGAAATGGTGTGGTGGGGTTGTGATCCTAACGTCTGCAACTGCTTTGTGGTACCTGTTTGAAAGAGCCGGTTACAACTTCTTGTCATTTGTTGCCAATGTTCTATTGCTTCTTGTCGTCATTCTTTTTTTCTGGGCCAAATCTGCTACCCTTCTCAATAGACCTCTACCTCCGCTTCCTGATCTGGAAATTTCTGAGGAATCTGTTTCTATGGTTGCTGATGAACTGCGATTGTGGATCAATTTTGCACTTTCAATAGCACGTGATATTGCAATAGGCAGAAACCTTAAGCTCTTTCTTCAGGTTGCTCTTGGACTATGGATTGTGTCATTCATTGGCAGTTTCTTCAACTTTCTTACACTGGTTTATATTGGGGTTCTTCTCAGTCTTTCAGCTCCTATAGTGTATGATAAGTACCAGGATCAGATCAATGAAAAGTTATATGTAACATATAGACATGCACAGATGCAATACAGGAAGCTTGACGAGAATGTTTTAAGGAAGATACCATTACCCTTAAACAAGGAGAAGAAGATGCAATAGGCATAGTACCTCACTTGATGATCAGTAACTACTTCAAAAGAATATGCAGAGGCACATTGGCTGGCTTTCAACAGGATGATCAGTAGATCTGAAGATTTTGATCAGAGGCATTAAGATTGCTTTTAAAAGCGATGTACTTCAGAATTCTAGATCTTTTAGAAAGCTGTGGTATATAGTTTAACATAAATGTATTCTGACTTTGACTTTGGGGTGAAAACTGAAATCAATAGTGTTTGATTTTGGATTGAAATAGTGTGTTGTCTAGCCCGGCTTCCTACTCTGGGTTCTGTAATTTTATTTTTGGCAATTATCCTCTGTTATTTCAACTAAATGAAAATAAAATTTTCGTAG ATGGGAGGATCTAATTCTTCTCGTCGCATTTGTGTTCATCAAGTGCTCGGCGGTGGTCATGTGGCTGATGTGCTGTTATGGAAGAAATGGTGTGGTGGGGTTGTGATCCTAACGTCTGCAACTGCTTTGTGGTACCTGTTTGAAAGAGCCGGTTACAACTTCTTGTCATTTGTTGCCAATGTTCTATTGCTTCTTGTCGTCATTCTTTTTTTCTGGGCCAAATCTGCTACCCTTCTCAATAGACCTCTACCTCCGCTTCCTGATCTGGAAATTTCTGAGGAATCTGTTTCTATGGTTGCTGATGAACTGCGATTGTGGATCAATTTTGCACTTTCAATAGCACGTGATATTGCAATAGGCAGAAACCTTAAGCTCTTTCTTCAGGTTGCTCTTGGACTATGGATTGTGTCATTCATTGGCAGTTTCTTCAACTTTCTTACACTGGTTTATATTGGGGTTCTTCTCAGTCTTTCAGCTCCTATAGTGTATGATAAGTACCAGGATCAGATCAATGAAAAGTTATATGTAACATATAGACATGCACAGATGCAATACAGGAAGCTTGACGAGAATGTTTTAAGGAAGATACCATTACCCTTAAACAAGGAGAAGAAGATGCAATAG MGGSNSSRRICVHQVLGGGHVADVLLWKKWCGGVVILTSATALWYLFERAGYNFLSFVANVLLLLVVILFFWAKSATLLNRPLPPLPDLEISEESVSMVADELRLWINFALSIARDIAIGRNLKLFLQVALGLWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDQINEKLYVTYRHAQMQYRKLDENVLRKIPLPLNKEKKMQ Homology
BLAST of CmUC05G091810 vs. NCBI nr
Match: XP_038906138.1 (reticulon-like protein B11 [Benincasa hispida]) HSP 1 Score: 374.4 bits (960), Expect = 6.3e-100 Identity = 194/207 (93.72%), Postives = 199/207 (96.14%), Query Frame = 0
BLAST of CmUC05G091810 vs. NCBI nr
Match: XP_008456165.1 (PREDICTED: reticulon-like protein B11 [Cucumis melo] >XP_008456167.1 PREDICTED: reticulon-like protein B11 [Cucumis melo] >TYK13890.1 reticulon-like protein B11 [Cucumis melo var. makuwa]) HSP 1 Score: 371.3 bits (952), Expect = 5.4e-99 Identity = 193/207 (93.24%), Postives = 200/207 (96.62%), Query Frame = 0
BLAST of CmUC05G091810 vs. NCBI nr
Match: XP_004140714.2 (reticulon-like protein B11 [Cucumis sativus] >KGN57499.1 hypothetical protein Csa_011153 [Cucumis sativus]) HSP 1 Score: 366.3 bits (939), Expect = 1.7e-97 Identity = 192/207 (92.75%), Postives = 199/207 (96.14%), Query Frame = 0
BLAST of CmUC05G091810 vs. NCBI nr
Match: XP_022941946.1 (reticulon-like protein B11 [Cucurbita moschata] >XP_022941947.1 reticulon-like protein B11 [Cucurbita moschata]) HSP 1 Score: 355.1 bits (910), Expect = 4.0e-94 Identity = 183/205 (89.27%), Postives = 194/205 (94.63%), Query Frame = 0
BLAST of CmUC05G091810 vs. NCBI nr
Match: XP_022982758.1 (reticulon-like protein B11 [Cucurbita maxima] >XP_022982772.1 reticulon-like protein B11 [Cucurbita maxima]) HSP 1 Score: 353.6 bits (906), Expect = 1.2e-93 Identity = 182/205 (88.78%), Postives = 194/205 (94.63%), Query Frame = 0
BLAST of CmUC05G091810 vs. ExPASy Swiss-Prot
Match: Q9LT71 (Reticulon-like protein B11 OS=Arabidopsis thaliana OX=3702 GN=RTNLB11 PE=2 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 5.1e-60 Identity = 126/208 (60.58%), Postives = 153/208 (73.56%), Query Frame = 0
BLAST of CmUC05G091810 vs. ExPASy Swiss-Prot
Match: Q6NPD8 (Reticulon-like protein B10 OS=Arabidopsis thaliana OX=3702 GN=RTNLB10 PE=2 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 3.8e-55 Identity = 112/197 (56.85%), Postives = 148/197 (75.13%), Query Frame = 0
BLAST of CmUC05G091810 vs. ExPASy Swiss-Prot
Match: O82352 (Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 2.5e-35 Identity = 82/193 (42.49%), Postives = 123/193 (63.73%), Query Frame = 0
BLAST of CmUC05G091810 vs. ExPASy Swiss-Prot
Match: Q9SUR3 (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 4.3e-35 Identity = 84/197 (42.64%), Postives = 123/197 (62.44%), Query Frame = 0
BLAST of CmUC05G091810 vs. ExPASy Swiss-Prot
Match: Q6DBN4 (Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.8e-33 Identity = 79/193 (40.93%), Postives = 118/193 (61.14%), Query Frame = 0
BLAST of CmUC05G091810 vs. ExPASy TrEMBL
Match: A0A1S3C273 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103496185 PE=4 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 2.6e-99 Identity = 193/207 (93.24%), Postives = 200/207 (96.62%), Query Frame = 0
BLAST of CmUC05G091810 vs. ExPASy TrEMBL
Match: A0A5D3CR52 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00790 PE=4 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 2.6e-99 Identity = 193/207 (93.24%), Postives = 200/207 (96.62%), Query Frame = 0
BLAST of CmUC05G091810 vs. ExPASy TrEMBL
Match: A0A0A0L980 (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G199610 PE=4 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 8.4e-98 Identity = 192/207 (92.75%), Postives = 199/207 (96.14%), Query Frame = 0
BLAST of CmUC05G091810 vs. ExPASy TrEMBL
Match: A0A6J1FMI0 (Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111447157 PE=4 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 1.9e-94 Identity = 183/205 (89.27%), Postives = 194/205 (94.63%), Query Frame = 0
BLAST of CmUC05G091810 vs. ExPASy TrEMBL
Match: A0A6J1J5P8 (Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111481527 PE=4 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 5.6e-94 Identity = 182/205 (88.78%), Postives = 194/205 (94.63%), Query Frame = 0
BLAST of CmUC05G091810 vs. TAIR 10
Match: AT3G19460.1 (Reticulon family protein ) HSP 1 Score: 232.3 bits (591), Expect = 3.6e-61 Identity = 126/208 (60.58%), Postives = 153/208 (73.56%), Query Frame = 0
BLAST of CmUC05G091810 vs. TAIR 10
Match: AT2G15280.1 (Reticulon family protein ) HSP 1 Score: 216.1 bits (549), Expect = 2.7e-56 Identity = 112/197 (56.85%), Postives = 148/197 (75.13%), Query Frame = 0
BLAST of CmUC05G091810 vs. TAIR 10
Match: AT3G19460.2 (Reticulon family protein ) HSP 1 Score: 199.1 bits (505), Expect = 3.4e-51 Identity = 116/221 (52.49%), Postives = 142/221 (64.25%), Query Frame = 0
BLAST of CmUC05G091810 vs. TAIR 10
Match: AT2G46170.1 (Reticulon family protein ) HSP 1 Score: 150.2 bits (378), Expect = 1.8e-36 Identity = 82/193 (42.49%), Postives = 123/193 (63.73%), Query Frame = 0
BLAST of CmUC05G091810 vs. TAIR 10
Match: AT4G23630.1 (VIRB2-interacting protein 1 ) HSP 1 Score: 149.4 bits (376), Expect = 3.1e-36 Identity = 84/197 (42.64%), Postives = 123/197 (62.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|