CmUC05G089930 (gene) Watermelon (USVL531) v1

Overview
NameCmUC05G089930
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionSterol regulatory element-binding protein cleavage-activating protein, putative
LocationCmU531Chr05: 8660909 .. 8661472 (-)
RNA-Seq ExpressionCmUC05G089930
SyntenyCmUC05G089930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCCCTAGTGTGTTCCTTTCGCCAAGCTCTCCTCTTCTCGAAGCCTCAGCCATGGAATCAAAGAAACAAAATCAACGACTCAACAATCTCGAAGAATCTCAGCAATTTCACAACATCATGCAGAGGCCAAGTCCAAGTAAACGCCAAGGGCTTCACTGGTTCTCCGGCGACAGCAAAAGACAGAGAAACCACCGCGAAAAAGCGTTCCGGCCAAAACAACAACAACAACAACAACGAAGACGAGGACGATGAAATTCCAGAAGCCGTATACAGCAGGATTATAACGAGAATCTTGGCTTTCGTCGGAGTTCCGATGGCCTTCGGTGTGACATTGCTGAAGATTTTTCAGGCGATCAAGGAGCAAAACCTTTGGGATGTGCCGATTTGGCTGCCATTTTTTACTACTTTCTTGACATTCGGAGCTTCGACGGTGGGAATTGCTTACGGGACGTTATCGACGAGTTTGGATCCGGAGAAGAAAGGATCTCTGTTCGGATGGGAAGATGCGCAGAAGAATTGGGTTGAAATGTGGAAGGAGGAAGATGAAGCCAGGCGCTGA

mRNA sequence

ATGAAAGCCCTAGTGTGTTCCTTTCGCCAAGCTCTCCTCTTCTCGAAGCCTCAGCCATGGAATCAAAGAAACAAAATCAACGACTCAACAATCTCGAAGAATCTCAGCAATTTCACAACATCATGCAGAGGCCAAGTCCAAGTAAACGCCAAGGGCTTCACTGGTTCTCCGGCGACAGCAAAAGACAGAGAAACCACCGCGAAAAAGCGTTCCGGCCAAAACAACAACAACAACAACAACGAAGACGAGGACGATGAAATTCCAGAAGCCGTATACAGCAGGATTATAACGAGAATCTTGGCTTTCGTCGGAGTTCCGATGGCCTTCGGTGTGACATTGCTGAAGATTTTTCAGGCGATCAAGGAGCAAAACCTTTGGGATGTGCCGATTTGGCTGCCATTTTTTACTACTTTCTTGACATTCGGAGCTTCGACGGTGGGAATTGCTTACGGGACGTTATCGACGAGTTTGGATCCGGAGAAGAAAGGATCTCTGTTCGGATGGGAAGATGCGCAGAAGAATTGGGTTGAAATGTGGAAGGAGGAAGATGAAGCCAGGCGCTGA

Coding sequence (CDS)

ATGAAAGCCCTAGTGTGTTCCTTTCGCCAAGCTCTCCTCTTCTCGAAGCCTCAGCCATGGAATCAAAGAAACAAAATCAACGACTCAACAATCTCGAAGAATCTCAGCAATTTCACAACATCATGCAGAGGCCAAGTCCAAGTAAACGCCAAGGGCTTCACTGGTTCTCCGGCGACAGCAAAAGACAGAGAAACCACCGCGAAAAAGCGTTCCGGCCAAAACAACAACAACAACAACAACGAAGACGAGGACGATGAAATTCCAGAAGCCGTATACAGCAGGATTATAACGAGAATCTTGGCTTTCGTCGGAGTTCCGATGGCCTTCGGTGTGACATTGCTGAAGATTTTTCAGGCGATCAAGGAGCAAAACCTTTGGGATGTGCCGATTTGGCTGCCATTTTTTACTACTTTCTTGACATTCGGAGCTTCGACGGTGGGAATTGCTTACGGGACGTTATCGACGAGTTTGGATCCGGAGAAGAAAGGATCTCTGTTCGGATGGGAAGATGCGCAGAAGAATTGGGTTGAAATGTGGAAGGAGGAAGATGAAGCCAGGCGCTGA

Protein sequence

MKALVCSFRQALLFSKPQPWNQRNKINDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRILAFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR
Homology
BLAST of CmUC05G089930 vs. NCBI nr
Match: XP_038877436.1 (uncharacterized protein PAM68-like [Benincasa hispida])

HSP 1 Score: 312.4 bits (799), Expect = 2.7e-81
Identity = 159/187 (85.03%), Postives = 169/187 (90.37%), Query Frame = 0

Query: 1   MKALVCSFRQALLFSKPQPWNQRNKINDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATA 60
           MKALVCSF QALL SKP PWNQR++INDSTI+K LSNFT   RGQVQVNAKGF+GSP+TA
Sbjct: 1   MKALVCSFCQALLLSKPPPWNQRSRINDSTITKKLSNFTRISRGQVQVNAKGFSGSPSTA 60

Query: 61  KDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRILAFVGVPMAFGVTLLKIFQAI 120
           KDRE  AKK SGQ   NN  ED+DDEIPEAVYSRIITRILAFVGVPMAFGVTLLKIFQAI
Sbjct: 61  KDREIEAKKLSGQ---NNKKEDDDDEIPEAVYSRIITRILAFVGVPMAFGVTLLKIFQAI 120

Query: 121 KEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWK 180
           KEQN+WDVPIWLPF TTFLTFGAST+GIAYGTLSTSLDPEKKGS+FGWE+AQKNWVEMWK
Sbjct: 121 KEQNVWDVPIWLPFLTTFLTFGASTMGIAYGTLSTSLDPEKKGSVFGWEEAQKNWVEMWK 180

Query: 181 EEDEARR 188
           EEDE  R
Sbjct: 181 EEDEEAR 184

BLAST of CmUC05G089930 vs. NCBI nr
Match: XP_008439311.1 (PREDICTED: uncharacterized protein PAM68-like [Cucumis melo] >KAA0033723.1 putative Sterol regulatory element-binding protein cleavage-activating protein [Cucumis melo var. makuwa])

HSP 1 Score: 305.8 bits (782), Expect = 2.5e-79
Identity = 158/188 (84.04%), Postives = 168/188 (89.36%), Query Frame = 0

Query: 1   MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFTTSCRGQVQVNAKGFTGSPAT 60
           MK+  CSFRQALL  KP P NQR   INDSTI+KNLSNFTT+ RGQVQVNAKGFTGSPAT
Sbjct: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPAT 60

Query: 61  AKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRILAFVGVPMAFGVTLLKIFQA 120
           AK+RET AK  SGQ    NNNED+DDEIPEAVYSRIITRILAFVG+PMAFGVTLLKIFQA
Sbjct: 61  AKNRETAAKNLSGQ----NNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQA 120

Query: 121 IKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMW 180
           IKEQNLWDVPIW+PFFTTFLTFGAST+GIAYGTLSTSLDPEKKGS+ GWE+AQKNWVEMW
Sbjct: 121 IKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMW 180

Query: 181 KEEDEARR 188
           KEEDE  R
Sbjct: 181 KEEDEVSR 184

BLAST of CmUC05G089930 vs. NCBI nr
Match: TYK23016.1 (putative Sterol regulatory element-binding protein cleavage-activating protein [Cucumis melo var. makuwa])

HSP 1 Score: 303.1 bits (775), Expect = 1.6e-78
Identity = 157/188 (83.51%), Postives = 167/188 (88.83%), Query Frame = 0

Query: 1   MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFTTSCRGQVQVNAKGFTGSPAT 60
           MK+  CSFRQALL  KP P NQR   INDSTI+KN SNFTT+ RGQVQVNAKGFTGSPAT
Sbjct: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQVNAKGFTGSPAT 60

Query: 61  AKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRILAFVGVPMAFGVTLLKIFQA 120
           AK+RET AK  SGQ    NNNED+DDEIPEAVYSRIITRILAFVG+PMAFGVTLLKIFQA
Sbjct: 61  AKNRETAAKNLSGQ----NNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQA 120

Query: 121 IKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMW 180
           IKEQNLWDVPIW+PFFTTFLTFGAST+GIAYGTLSTSLDPEKKGS+ GWE+AQKNWVEMW
Sbjct: 121 IKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVVGWEEAQKNWVEMW 180

Query: 181 KEEDEARR 188
           KEEDE  R
Sbjct: 181 KEEDEVSR 184

BLAST of CmUC05G089930 vs. NCBI nr
Match: XP_004150568.1 (uncharacterized protein PAM68-like [Cucumis sativus] >KGN61652.1 hypothetical protein Csa_006286 [Cucumis sativus])

HSP 1 Score: 292.0 bits (746), Expect = 3.7e-75
Identity = 152/189 (80.42%), Postives = 163/189 (86.24%), Query Frame = 0

Query: 1   MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFT-TSCRGQVQVNAKGFTGSPA 60
           MK+L CSF QALL S P PWNQR   IN STI+ NL+NFT T  RGQVQVNAKGFT SP 
Sbjct: 1   MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPR 60

Query: 61  TAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRILAFVGVPMAFGVTLLKIFQ 120
           TAK+RETTA+         NNNED+DDEIPEAVYSRIITRILAFVG+PMAFGVTLLKIFQ
Sbjct: 61  TAKNRETTAQ---------NNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQ 120

Query: 121 AIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEM 180
           AIKEQNLWDVPIW+PFFTTFLTFGAST+GIAYGTLSTSLDPEKKGS+ GWE+AQKNWVEM
Sbjct: 121 AIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEM 180

Query: 181 WKEEDEARR 188
           WKEEDE RR
Sbjct: 181 WKEEDEGRR 180

BLAST of CmUC05G089930 vs. NCBI nr
Match: XP_023541387.1 (uncharacterized protein PAM68-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 284.6 bits (727), Expect = 6.0e-73
Identity = 142/187 (75.94%), Postives = 159/187 (85.03%), Query Frame = 0

Query: 1   MKALVCSFRQALLFSKPQPWNQRNKINDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATA 60
           MKALVCSFR AL  SKP PW QR++I+DST +KNL  FT + RGQ+Q+NAKGFTGSPATA
Sbjct: 1   MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATA 60

Query: 61  KDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRILAFVGVPMAFGVTLLKIFQAI 120
           KDRET  KK SGQNN+      +DDEIPEAV  RIITRILAFVGVPMAFGVTL+KI +A+
Sbjct: 61  KDRETAVKKPSGQNNSRGGGGGDDDEIPEAVAKRIITRILAFVGVPMAFGVTLVKILEAV 120

Query: 121 KEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWK 180
            EQ LW VPIWLPF T FLTFGAST+GIAYGTLSTSLDPEK+G+LFGW++AQKNWVEMWK
Sbjct: 121 HEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWK 180

Query: 181 EEDEARR 188
           EEDEA R
Sbjct: 181 EEDEANR 187

BLAST of CmUC05G089930 vs. ExPASy Swiss-Prot
Match: Q9LTD9 (Uncharacterized protein PAM68-like OS=Arabidopsis thaliana OX=3702 GN=At5g52780 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.4e-29
Identity = 69/182 (37.91%), Postives = 108/182 (59.34%), Query Frame = 0

Query: 1   MKALVCSFRQALLFSKPQPWNQRNKINDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATA 60
           M+AL+CS R   L S  +   +    N  T+     N       ++    KGF  S    
Sbjct: 1   MRALLCSHRLLPLSSLSRTTVKTKSHNPKTL---YPNNKPRWESKLHAGPKGFQSS---- 60

Query: 61  KDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRILAFVGVPMAFGVTLLKIFQAI 120
                   + S +    + + ++D  IP+ V+ R++ RI+  VG P+  GV +LK+ + +
Sbjct: 61  --------RTSEKPGRPDPDPEDDPPIPQEVFERMMGRIVVSVGTPLGLGVAILKVLEVL 120

Query: 121 KEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWK 180
           K++N+WDVP+W+P+ TT +TFG+S +GIAYG+LST+LDP K  SLFG ++A++NWVEMWK
Sbjct: 121 KDRNVWDVPLWVPYLTTLVTFGSSALGIAYGSLSTNLDPAKTNSLFGLKEAKENWVEMWK 167

Query: 181 EE 183
           E+
Sbjct: 181 ED 167

BLAST of CmUC05G089930 vs. ExPASy Swiss-Prot
Match: O49668 (Protein PAM68, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM68 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.6e-18
Identity = 51/140 (36.43%), Postives = 82/140 (58.57%), Query Frame = 0

Query: 51  KGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDE----------IPEAVYSRIITRIL 110
           KGF   P   K +++   K   Q++ ++++EDEDD+          IPE V +R+I+R+ 
Sbjct: 68  KGF--GPPPKKTKKSKKPKPGNQSDEDDDDEDEDDDDEEDERERGVIPEIVTNRMISRMG 127

Query: 111 AFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPE 170
             VG+P+  G+     F  +K     DVP W+PF  +F+ FG +  G++YG +S+S DP 
Sbjct: 128 FTVGLPLFIGLLFFPFFYYLKVGLKVDVPTWVPFIVSFVFFGTALAGVSYGIVSSSWDPL 187

Query: 171 KKGSLFGWEDAQKNWVEMWK 181
           ++GSL GW +A+KNW   W+
Sbjct: 188 REGSLLGWNEAKKNWPVFWQ 205

BLAST of CmUC05G089930 vs. ExPASy TrEMBL
Match: A0A5A7STB5 (Putative Sterol regulatory element-binding protein cleavage-activating protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G001970 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.2e-79
Identity = 158/188 (84.04%), Postives = 168/188 (89.36%), Query Frame = 0

Query: 1   MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFTTSCRGQVQVNAKGFTGSPAT 60
           MK+  CSFRQALL  KP P NQR   INDSTI+KNLSNFTT+ RGQVQVNAKGFTGSPAT
Sbjct: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPAT 60

Query: 61  AKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRILAFVGVPMAFGVTLLKIFQA 120
           AK+RET AK  SGQ    NNNED+DDEIPEAVYSRIITRILAFVG+PMAFGVTLLKIFQA
Sbjct: 61  AKNRETAAKNLSGQ----NNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQA 120

Query: 121 IKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMW 180
           IKEQNLWDVPIW+PFFTTFLTFGAST+GIAYGTLSTSLDPEKKGS+ GWE+AQKNWVEMW
Sbjct: 121 IKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMW 180

Query: 181 KEEDEARR 188
           KEEDE  R
Sbjct: 181 KEEDEVSR 184

BLAST of CmUC05G089930 vs. ExPASy TrEMBL
Match: A0A1S3AZ57 (uncharacterized protein PAM68-like OS=Cucumis melo OX=3656 GN=LOC103484134 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.2e-79
Identity = 158/188 (84.04%), Postives = 168/188 (89.36%), Query Frame = 0

Query: 1   MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFTTSCRGQVQVNAKGFTGSPAT 60
           MK+  CSFRQALL  KP P NQR   INDSTI+KNLSNFTT+ RGQVQVNAKGFTGSPAT
Sbjct: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPAT 60

Query: 61  AKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRILAFVGVPMAFGVTLLKIFQA 120
           AK+RET AK  SGQ    NNNED+DDEIPEAVYSRIITRILAFVG+PMAFGVTLLKIFQA
Sbjct: 61  AKNRETAAKNLSGQ----NNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQA 120

Query: 121 IKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMW 180
           IKEQNLWDVPIW+PFFTTFLTFGAST+GIAYGTLSTSLDPEKKGS+ GWE+AQKNWVEMW
Sbjct: 121 IKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMW 180

Query: 181 KEEDEARR 188
           KEEDE  R
Sbjct: 181 KEEDEVSR 184

BLAST of CmUC05G089930 vs. ExPASy TrEMBL
Match: A0A5D3DHC5 (Putative Sterol regulatory element-binding protein cleavage-activating protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G001260 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.8e-79
Identity = 157/188 (83.51%), Postives = 167/188 (88.83%), Query Frame = 0

Query: 1   MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFTTSCRGQVQVNAKGFTGSPAT 60
           MK+  CSFRQALL  KP P NQR   INDSTI+KN SNFTT+ RGQVQVNAKGFTGSPAT
Sbjct: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNRSNFTTTSRGQVQVNAKGFTGSPAT 60

Query: 61  AKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRILAFVGVPMAFGVTLLKIFQA 120
           AK+RET AK  SGQ    NNNED+DDEIPEAVYSRIITRILAFVG+PMAFGVTLLKIFQA
Sbjct: 61  AKNRETAAKNLSGQ----NNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQA 120

Query: 121 IKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMW 180
           IKEQNLWDVPIW+PFFTTFLTFGAST+GIAYGTLSTSLDPEKKGS+ GWE+AQKNWVEMW
Sbjct: 121 IKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVVGWEEAQKNWVEMW 180

Query: 181 KEEDEARR 188
           KEEDE  R
Sbjct: 181 KEEDEVSR 184

BLAST of CmUC05G089930 vs. ExPASy TrEMBL
Match: A0A0A0LLM4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G213970 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.8e-75
Identity = 152/189 (80.42%), Postives = 163/189 (86.24%), Query Frame = 0

Query: 1   MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFT-TSCRGQVQVNAKGFTGSPA 60
           MK+L CSF QALL S P PWNQR   IN STI+ NL+NFT T  RGQVQVNAKGFT SP 
Sbjct: 1   MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPR 60

Query: 61  TAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRILAFVGVPMAFGVTLLKIFQ 120
           TAK+RETTA+         NNNED+DDEIPEAVYSRIITRILAFVG+PMAFGVTLLKIFQ
Sbjct: 61  TAKNRETTAQ---------NNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQ 120

Query: 121 AIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEM 180
           AIKEQNLWDVPIW+PFFTTFLTFGAST+GIAYGTLSTSLDPEKKGS+ GWE+AQKNWVEM
Sbjct: 121 AIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEM 180

Query: 181 WKEEDEARR 188
           WKEEDE RR
Sbjct: 181 WKEEDEGRR 180

BLAST of CmUC05G089930 vs. ExPASy TrEMBL
Match: A0A6J1CGP3 (uncharacterized protein PAM68-like OS=Momordica charantia OX=3673 GN=LOC111011500 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.8e-73
Identity = 142/187 (75.94%), Postives = 163/187 (87.17%), Query Frame = 0

Query: 1   MKALVCSFRQALLFSKPQPWNQRNKINDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATA 60
           MKAL+CS+RQAL  S+P PW  R++INDSTI+KNL+N +   RG V+VNAKGFTG+PATA
Sbjct: 1   MKALLCSYRQALHLSEPPPWKPRSRINDSTITKNLTNLSRIARGDVRVNAKGFTGTPATA 60

Query: 61  KDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRILAFVGVPMAFGVTLLKIFQAI 120
           K+RE  A+K SGQNN++N   D+DDEI EAV +RIITRILAFVGVPMAFGV LLKIF+ I
Sbjct: 61  KEREAAARKISGQNNSSN---DDDDEISEAVSNRIITRILAFVGVPMAFGVALLKIFETI 120

Query: 121 KEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWK 180
           KEQ +WDVPIWLPF TTFLTFGAST+GIAYGTLS SLDPEK+GSLFGWE+AQKNWVEMWK
Sbjct: 121 KEQKVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWK 180

Query: 181 EEDEARR 188
           EEDEA R
Sbjct: 181 EEDEASR 184

BLAST of CmUC05G089930 vs. TAIR 10
Match: AT5G52780.1 (Protein of unknown function (DUF3464) )

HSP 1 Score: 128.3 bits (321), Expect = 6.7e-30
Identity = 69/182 (37.91%), Postives = 108/182 (59.34%), Query Frame = 0

Query: 1   MKALVCSFRQALLFSKPQPWNQRNKINDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATA 60
           M+AL+CS R   L S  +   +    N  T+     N       ++    KGF  S    
Sbjct: 1   MRALLCSHRLLPLSSLSRTTVKTKSHNPKTL---YPNNKPRWESKLHAGPKGFQSS---- 60

Query: 61  KDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRILAFVGVPMAFGVTLLKIFQAI 120
                   + S +    + + ++D  IP+ V+ R++ RI+  VG P+  GV +LK+ + +
Sbjct: 61  --------RTSEKPGRPDPDPEDDPPIPQEVFERMMGRIVVSVGTPLGLGVAILKVLEVL 120

Query: 121 KEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWK 180
           K++N+WDVP+W+P+ TT +TFG+S +GIAYG+LST+LDP K  SLFG ++A++NWVEMWK
Sbjct: 121 KDRNVWDVPLWVPYLTTLVTFGSSALGIAYGSLSTNLDPAKTNSLFGLKEAKENWVEMWK 167

Query: 181 EE 183
           E+
Sbjct: 181 ED 167

BLAST of CmUC05G089930 vs. TAIR 10
Match: AT4G19100.1 (Protein of unknown function (DUF3464) )

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-19
Identity = 51/140 (36.43%), Postives = 82/140 (58.57%), Query Frame = 0

Query: 51  KGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDE----------IPEAVYSRIITRIL 110
           KGF   P   K +++   K   Q++ ++++EDEDD+          IPE V +R+I+R+ 
Sbjct: 68  KGF--GPPPKKTKKSKKPKPGNQSDEDDDDEDEDDDDEEDERERGVIPEIVTNRMISRMG 127

Query: 111 AFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPE 170
             VG+P+  G+     F  +K     DVP W+PF  +F+ FG +  G++YG +S+S DP 
Sbjct: 128 FTVGLPLFIGLLFFPFFYYLKVGLKVDVPTWVPFIVSFVFFGTALAGVSYGIVSSSWDPL 187

Query: 171 KKGSLFGWEDAQKNWVEMWK 181
           ++GSL GW +A+KNW   W+
Sbjct: 188 REGSLLGWNEAKKNWPVFWQ 205

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038877436.12.7e-8185.03uncharacterized protein PAM68-like [Benincasa hispida][more]
XP_008439311.12.5e-7984.04PREDICTED: uncharacterized protein PAM68-like [Cucumis melo] >KAA0033723.1 putat... [more]
TYK23016.11.6e-7883.51putative Sterol regulatory element-binding protein cleavage-activating protein [... [more]
XP_004150568.13.7e-7580.42uncharacterized protein PAM68-like [Cucumis sativus] >KGN61652.1 hypothetical pr... [more]
XP_023541387.16.0e-7375.94uncharacterized protein PAM68-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q9LTD99.4e-2937.91Uncharacterized protein PAM68-like OS=Arabidopsis thaliana OX=3702 GN=At5g52780 ... [more]
O496682.6e-1836.43Protein PAM68, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM68 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A5A7STB51.2e-7984.04Putative Sterol regulatory element-binding protein cleavage-activating protein O... [more]
A0A1S3AZ571.2e-7984.04uncharacterized protein PAM68-like OS=Cucumis melo OX=3656 GN=LOC103484134 PE=4 ... [more]
A0A5D3DHC57.8e-7983.51Putative Sterol regulatory element-binding protein cleavage-activating protein O... [more]
A0A0A0LLM41.8e-7580.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G213970 PE=4 SV=1[more]
A0A6J1CGP33.8e-7375.94uncharacterized protein PAM68-like OS=Momordica charantia OX=3673 GN=LOC11101150... [more]
Match NameE-valueIdentityDescription
AT5G52780.16.7e-3037.91Protein of unknown function (DUF3464) [more]
AT4G19100.11.8e-1936.43Protein of unknown function (DUF3464) [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021855PAM68-likePFAMPF11947DUF3464coord: 57..181
e-value: 4.3E-41
score: 140.2
IPR021855PAM68-likePANTHERPTHR34575PROTEIN PAM68, CHLOROPLASTICcoord: 1..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..85
NoneNo IPR availablePANTHERPTHR34575:SF6EXPRESSED PROTEINcoord: 1..185

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC05G089930.1CmUC05G089930.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane