CmUC05G087990 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC05G087990
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	50S ribosomal protein l3
Location	CmU531Chr05: 6674012 .. 6682747 (-)
RNA-Seq Expression	CmUC05G087990
Synteny	CmUC05G087990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTCCAGAGTCTCCAAGGTCGAAATCGGCCCTAAAATCTGAATCAAATCCCTCGTCTTCCTCGCTGATCTTTCCCCATTTCGTGTCGTAATCGTTGTGATTTGTCCTCACCATGTCAGCTTTATCCAGAGGTCTCATTTCTCGTCTTCGTCTTCTCTCGATCAATTCCGGCACTTCTCATACAAGTATTTCTTCTTCTTCTTCAAGGACAAATGCGTCTTGTTACTATTTCGCCCGTGCTTTCAGTACCCAGGATTTGATCCAGGCCAGCGATGGGTCTTTGTCATCTTCTTCGATTATTGAAGCTAAACCTGGTGTTATGGCCCCTAACTCGAAGCGGACGGGTGTTATTGCCGTCAAGTGTGGAATGTCGGCGCTGTGGGATAAATGGGGAGCTAGGATACCCGTCACTGTGCTCTGGGTTGATGATAATATTGTTTCACAGGTCAAGACCATTGAGAAAGAAGGTATCACAGCTCTCCAGGTACTGTTCAAATCTCTTCTTCTCATTTTTATTCCGTTAGTGGAGTATTTATTATTATTTTTAGTTGTCGTTGCTACTTAGATGAAATTAGGAGCATGACTGAAAACTAGAAAACCGACATTTCTTGCCTTGGCATTGTTAGTTTCTATCTCGCAGCCGTAGAACCAAAGAAAGCAGGAATGAAATGGGATTTTGGCTTAATGATGTTGAGGAGTCTATTTTTGGCCTAATGATATTCTTTTGGACTGGGGTCCTTGTCTGTAGTTAGTGTCGAACTCTCTGTTTTTGTTGGACCTTTTTTTTTTTTTTGAGCTCTTGTATATTCTTTCACTTGTCTCAATGTAGGTGTGGTTCCTTACTGATATATATTCTCTTACGTGAGAGGGATTTGAAGCTGTTGTTTTGGCTTCCCACACTTTCAATTCCATGGGTTTTGTTATTATACTGAACAGAACTGTTGCACATTGTTGTTTTGGACCAGAATTTCACCAGCTCCTATCATCTCATCACTTCCATCCATACACTTAGCTAGACATAACCATTTGTGGCTTTTTAAATTACAATAACTGTGTATTGAGGTTGATGGTTGTACTCCTTGCATCATGTTCATGGCCAATCCCACTAATCTTCGGAAGATTTTCACCCACCCAATACTAACTTTGAAAGACAACTAGAGTTTTAGATATTGGTAAAATTTATACCTGGTGTTGATTTCACTCTTTCTAAAGAAAATACCAATTGTCTCCTCCATTAAACCATATGTTTAGGGTTCTTTTTTCTTTTTCAGTTCTTACATATTTTATTTCCTACAACTTGAATTTATTGACCAAAGGTGCTATGGTATGGTGCTAGTTAGATTGGCTGTGGACAGAAGAAGGCGAAGCATTTGACAAAACCTGAGTTAGGCCATTTTAGGGCTCAAGGTGTTCCATTAAAAAGGAAATTGAAGGAGTTCCCGGTGTCAGAAGATGCACTTCTTCCAGTTGGTACAGCAATTGGCGTTCGTCATTTTGTTCCTGGACAGTATGTTGATGTGACAGGAATAACTACAGGGAAAGGTTTTCAGGTGAATCCATTGAACCATTTTTTTTTTTGATAAGAAACAATTTCATTGATGAATGAAATATCCAAAGATTCATTCAATTCCTTATATTTGGCATTATGGTTAAGTCAGTTATGTATCAAAATTACTCAAACAGTAAAATGTTATCGTGGGAACATTGACTCATATAAATGTGTCTCTCTCTGAGTTTAGGTCAAAGTACCAATTAAAAGCTGTTTAATCATCAATGACAACTGAATGAACAGATCTATGAAATTGAACTGCAATAAGTGATAACTGTAAACTGGGCGCGTTTAAAAAACATTGTTGGTTCCTTTTCTCTTTCTTCCTTGGCATTGACATTTCTAGTCAATTATGTTCATCAACAGTATTCTGTATGTACTGATATTTCTTCCAGGGATTCTCAAATATGCTATTTTTAATCGTGGTAGCACTGCATAATGTGATATCAAGGACATGGACTATTGGCCTTTGCATCAACTTCAAGCAATACTGATGATGTCAGCCTTGTTATGTTTAACTACCCACAACTTTCTTTGATGTGCAACTTACAACTCAAACTTTAACTTATAGAGCAAGTCCAATCCAATTAAAGTATCAAGTTACATCAAATGAACATATAGGTGTAAGCGATCATATCTTTTAAAACAAAAACCACCCAAATAACAAAGAATGCGAAAACCACAATAGTAGAGATCTGTAGTTCAAAACTCAAGTGAACAACCTCATGGTATCCTACTAATAACTAAACTCCAAAATCTAAAATGTCCATTGAAGAGTCAAAATGAGAGTTTTAGCAGAAACAATTATTGGACAAGTTATGTATCTTGTTTGTCATTGTCAGATTCCAATTTGTATCATTGCAATCCTTACTTTGGGTTATGGGCATTATAATAGATTTAGTAAGCAGTAAGCAAATATTTACATGATTCTCAAACATAAGCATGCTTAATTACCTGACTTGCTGCATGGTCTGCAAGATACAATTTAACCATCAAAGTTACACCGAGATATACGTGTTTATCATAAGATAACACGAACAATTTCTCGATTAGATTATGTGCATCCTGGAGACAAAAATAATAAAAAAAACACAATTCATATATATAAGCATACAGAAAAAAAAATATATAAGGGAGCTAACCCCTTTGAAAGCTGTGATCTTTGCTTTGTCTTCTTTCATGTTTGTGCTAATTTGGCTAATATCAAGTTGTATATTTGTGTCCTGAAAATTTTTCATGAGATCTTGAATAATCATAACAAAATTGTTTCCTTACCTTGTGTAAATGGTATAAAATATTTTCCATGAAAACAATGTCTCTCATTGCTAATCCTTTTTCTAATTGTGCTCAGGGAGTGATGAAAAGGCATGGTTTTTCAGGAATGCCGGCATCCCACGGAGCATCACTATCCCATAGAAGTGGTGGTTCTACGGGTCAGAGGGATGCTCCTGGAAAGGTGCGTTTATCTTTCCTTGGTGGTATTCATTTTTATGATTGAGTGGTATCTTGGTTCTTCATTGTACTTTAGAGCTGCCTGAAACTCACAATTGAGATAGTAGAGAAGTTGTAGTAGTATATACCGGTAGCCTACTAGGTCGCTTCTGATTCTCAGAGTATTGCAAGGCTCCTGAATGAATGGTAATTTCATAGAAGAGAAATAAGAATTGACTGGGAGCATATAGTTACAAAACAAGTATGAATAACTTGCATGGTGAAAGTTTATTCACATAATTCCACCCTGGACAGTTTACGGATGTCACTCTGCTTGTGGAATGAATTAGTATCGAGTAACATGTGGAAATTTTCATTGGTTACAATCTTGAAAATAATATTCTTTCTGTTGGTCTATTCCTGGTGAAGCTTTAATATTTACGAAGTTTGAATAGCCTTATACTCTTGAACCCTCTTTCAAATACTGACCTGTTATTCTACAGTTCCGTGATTCAATAGAATATACTTGGAGTTCTGTCAGATTTGCTTTGCATAGGGAACCGTGGAAACTTTTATATCGAATCTTAGAAGCTTGTCCCTGTTTCTAAATAACAGAAAAAAGAAAATCCAAAGTGTGGAATAATTTTTTATGATCTGTTAATAGTGAGTTCTAGTCCGTTTTCATTGTATTCCATGTAATTTATGATAGTGAGAAACATGCGGTTATTTTGCAGGTCTTCAAAGGTAGAAAGATGGCTGGGCGCATGGGTGGGAAGCAGAGAACTGTGAAAAATGTGTGGATATACAAAATTGATCCTGCAAGAAACTTGATATGGGTGAGAGGACAAGTAAGTTTCTTCTAAAACCAAATTTCAAACTCTTGATCTGATCCTTATACTTGAGTCCTTGTTATATACATCAATATCATATACTCTTGGGACATCATGGTCTGAGGCTTTTGCTGCCCATAACTCCACCTTTTCTTTAGGTCCCTGGCACCGAAGGAAACTTTGTATTTATAAAGGATGCTGTCTACAAGAAACTCAATAAGTCGGTTCTTCCATTTCCTACGTACTTTGCAGCTGACAACGAGGACACAGAGAAGTTGGAACCTCTTGTTGCTGATCTTGGAGAAGTAGATCCATTTATGGTTGGAGATTGATTAGGAGTTGCCCTTCAAAGCAAGTTGTGGAATATGCTCTGCTTTTTTCTTCTATTGATGGTGTATGCAGGTTTGCTTATTGACAACCCTTATGAGTAGTCAATTTCATTATAGAAATGCAGTCGGAGGATCTGTACAAGGCGATCCAATCTCTGATCCAATCCCCGGTCCAATCTCCTAATGAGATGGGAATCTATTGTTACATTTTTCTTTTTAAAAATTTTCTCACCATCTCAAACCTGTACCGGAAAATACCATTTTGAAATAAAGATTAAGGGAAAAAAAAGCTATGGTGATTGAGAATTTTTTGTTGAGTGATCTTATAATTTCTTTTGGGTTGGACTTAATGTTTATGTGAACTTAGAGGAAGAGATTATTCATGGCTGCCAATAGTGTTAGCAATTTCTTTACTGATCCGAACAGTCTCCTCTCTTGAGCTGAAGTGTCTAACGTCCTTTTTCTTTTATTATTTGTAATGCATTCCCTTTGCATTTGGAATTTGGAAATGTCATTCGTTCATGTTTGACCCCGTCAAGTTGAATCAAAATGATACATTTCATGAAAGATTATACACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTGTATTTGTTTTTTGGTCGTTGATTGAGAGATTTGAACCGTTTCATGAAAGTGAAGATAAATTTTTGTTTTTTTTGTATTTGTTTTTTTTTTGTTGATTGAGAGATTTGAATTTCTGACCAGGGTCGAGGGTATATGACTAAATTAATTTTGCCATGCTTAGGTTGCCATAATGTTTCAGTTTGCTTTTTAAGTTTTGAATGGTTTAGTTGGGCTTGATTTGCAGAAATATTTATCATTAGCCTAAACTTTGAACTTTTGCAAAGATATTGCTTTTGAATTGAGTGCTAAAAAATATTTCTCTCTAAAACTGAAGGATGGAAATTGAGATGGTTGTAAAAATTATAGATCATATTATATACAATTATATAGAATATTCATATTGTTTTTATGATTTATTTTGTTCTAAAAGACTCTTGTTGAACTTATTTACATAATCAATTTTAATTTAGTTGAGATCGTTCTCTTTAAAAAAATTATATAAAATTTACATAAAAAGTATACATATATTTTCTTGAAGTCGTGGATGAAAAATCTGGCAAAAACGTATTTAGATGATTAGACATTTCACGTATTTAGAAAATTGGCCGTAATTGCATTAACTTTTATATATTATTTAATTTCAATGTTTTGATTGGGTCGTGATTTGATTTTGTTTTTTTTTTTTAAATTAAGTTAATTTTCTTTTACATATTTCTTAAATACAAAAGTTAAGGCTCTATTTGATAATTATTTGGTTTTGAATTTTTGTTTTTGAAAATTAAATTTATAGACATGGTTTCTACTGCCAAATTTCTTCATTTGTTATCTATTTCTTACCAATGGTTTAAAAAACTAAGCTAAATCTTAAAAACTAAAAAAAAAAAGTACTTTTAAAAATTTGTTTTGTTTTTGTTATTTGGTTAAGAATTCAACTATTGTACTCAACAAATATGCAAATCATTATAAGAAATCGATAAAAAATAGACTTATTCTTCAAAAATAAAAAACAAAAAACAAAATGGTTATTGGACGAAGCAAGTTTTTAGTCCAATTTTAAAAACATAAACAAGATTTTCCAAAACTATTTTGTTTTATTGTCTCTAAAACTTGTTTTAGAGACGAAATTAATGTTTATAATCTTTGATTTTAAAAAAATTAAAAACTAAAAGTTGAACGAGGCTAAAAAAAGTTTGAGTGAAGTGAGCATACTCACCTACCTTTAAAGTTGGAGATGTGAAGCTTACAATAAGTTCTTATAAAATCGTTCACCCTTTGTCAAAATGGACTTTAAGATCAAGTTCATTTTTTTAAAAATAAAATACTACTTGATAATTGAGATACACAAATCTTAATTTCTTTCTTTCAAACACATGAGTCACAAATTAAGTGACCATAATCCCAATCCCTCACACTACTTTTAGGAATGAATTTCACGAAATATCCAACCCAAACTTCTTAAATACATGTTTGAAAGTAATTTTGAAATTGTTAGAATAAATTTTTGCATGAGTCACAAATTAAGTGACCATAATCCCAATCCCTCACACTACTTTTAGGAATGAATTTCACGAAATATCCAACCCAAACTTCTTAAATACATGTTTGAGAGTAATTTTGAAATTGTTAGAATAAATTTTTGTCATGTTTAAAATCATTATGAAATATACCAAATTAATTTTGTGTTCAAATTTATAATTTTAAATTAATTTCCATAAAATCGATTTTGAATGATTAAAAATAAAAACGGTCTGGATTGGTTTTTAAAAAATTCAAAATCACTCTAAATATTCACTCCTTCCAAATCCACGTGGGGGAACATTCCCCAACTAAAAATAAATAAATAAATACATAAATATGGTTGATTGAAGGACAAATTGCAAAAATCACCCCTAAACCATGGTGGTACCTGCAATTATACCCTTTAACTTTTAATTATAAAAATTTGGGCTTTAAACTTCTACAAGTGTTAAAATTAAATCCTCAAGCTTATAATAGTAGTAGAAATTAAACCCACAAATGATAAAAATTGAAGCCTAAAAAACTTATACAAATGTTACCAATTATAGAATAATGTAAATTTGAAAGTTCAATTTGATCCAATTTTAACATTTATAAATGTTTGAGTGCTCAATTGTTTAAATTGAAAGTTTTAAAGGTGGTTTTTGCAATTTAGGGTAAAAAAAAATACTAATTTATGAGAAAATTAATATAAATTGATAGAAGACGTTATTCTTCTGCAGATTTGAGTTCAAAATTCAAAGAAAGAGAGCCAAATCGGCATACGAATTCTTCTTCTTCTTCTTCTTCTTCTTCAGGCGGTCAGCCCAATCTTCCATTCCTCCATTTTTCTTCTTCTTAAACATCCTTTCAAGGTTTTTCTCTCTCTCTTCTTTAAGCTTCAGAGCCCCACCTTCCCTTCCATCGGATTCTCTCTCTCCGCCTCTCATTCTAGGGTTTCTGTTCCGGCGAATGCTGCTGCTGTTGCTGTTGCTGTTGCTGTTCCTCCGATGAATCGCTCACACTGCAACCAACTTCAATCCAATTCCATTTCTCACTGCCAAGAATGCGGCATCTCCCAATCCGCCTGTTGGATCCTCCACAATGTCCGTCTCAAAGCCTCCTTCCGTCGTCTCTGCACCAATTGCGTCCTCAAGCACAATCTCCCCCGTTTCTGTCCTCTTTGCTTCGACGTTTACGACGATTCGACTCCTCCACCATCTCATCAGCGAGTTATGTGCTTCAGATGCCCTTCAATCTCTCATCTCTCTTGCGCTTCCTTTCGTTTTTCGTCTAACTTCCTATGCCCTCTCTGCTCCGATCCTTGTTTTTCATTCTTCGATGGTTTTAACTCCGGCGGCCTTTGTCAATCTGAGTCCAACGTCGCCTTTTTGGCCGGGAGAAGCGTTGATGGTAAATCAGCGAAAGCGATTGTCGCTGCGGCTCGTGTCTCAGCTCAATCCATGCGGAGAGCAGCTCTCGATGCTAGGGCTGTAGCGGAGATGAAGATCAAGAATGCTGCCTTTGCTAAGAAACAAGCTACTCTCGCATTGGAACGGCTTGCTTATCTTGTGCTTCAGGAGAAGGACAAAAATGGATATGCTAAAACTAATGGAGATGCTGTTGCTGGTGAGAGGACGGTTGAAGAAGAAGATTCCAAGCTACCGGATAAAGGGGTAACAACCATTTTCGATCGTATGAAGGGGAATCAAACTACGTAGCGGACCAATCGATTTTGACGAAGGTAACTGATTATGGAAACTAACTGTAGAGAGTAATCTTGTTCGACTGTCTCATTCAATTGAGTACCTCAAAGATTCAGTAGAATACAGGGCATTGAGGTACTATTAACCATCCATGGAAGCTTCTGAATCAATGTAGTAATGATTTTTCTTTCTCCATGGATGCCAAGAACAATCAATTGAGGGAAGTTTGAATGAATTGCCATGTACATTTCAAATTTTCAACATTGTTTGCTTAACCCTTTTGGGAGATTTTCTCCTTATTGAAGTTCTATCGAGAATGTTGCAGCAGCCTGTTCTACTTCTCTATTGATTCCAATTCTTTATTTTATCACTCGTGTTTCTGTTTTGTCTCTTTTGAGTTGCTTAACATATGGTTCTCAGCTTCTTTTTCATTCTGCTCTCTTCGATGGACCATTTTTGTCAGAATCTCATAGCTTTTATGGGCGTGGACGCCATTGTTGCCACCTTTGAGCTACTAGAATCGCCAATTGGCCCATTGCAGAATGGAGCCACGGCGGGCATTTTTGATATTCAAATGCCAGTTTCGGCGGCGATCGCGGCGGCGGCGGAGGTAGATTGTGATGTATATTTTCTCGTAAAATTGACTATTTCCGCTTCTTCGTTGTCTCTTCAAAACTGCCATTTTCAATTTCTCGAGCATTCAACCAGTAAAGTTCGGTTCTGCTGCGACTTCTCTGAGTTGCCATTTCCCTTCGTTTGGTTCAGATGA

mRNA sequence

ATGAAATTCCAGAGTCTCCAAGCTTTATCCAGAGGTCTCATTTCTCGTCTTCGTCTTCTCTCGATCAATTCCGGCACTTCTCATACAAGTATTTCTTCTTCTTCTTCAAGGACAAATGCGTCTTGTTACTATTTCGCCCGTGCTTTCAGTACCCAGGATTTGATCCAGGCCAGCGATGGGTCTTTGTCATCTTCTTCGATTATTGAAGCTAAACCTGGTGTTATGGCCCCTAACTCGAAGCGGACGGGTGTTATTGCCGTCAAGTGTGGAATGTCGGCGCTGTGGGATAAATGGGGAGCTAGGATACCCGTCACTGTGCTCTGGGTTGATGATAATATTGTTTCACAGGTCAAGACCATTGAGAAAGAAGGTATCACAGCTCTCCAGATTGGCTGTGGACAGAAGAAGGCGAAGCATTTGACAAAACCTGAGTTAGGCCATTTTAGGGCTCAAGGTGTTCCATTAAAAAGGAAATTGAAGGAGTTCCCGGTGTCAGAAGATGCACTTCTTCCAGTTGGTACAGCAATTGGCGTTCGTCATTTTGTTCCTGGACAGTATGTTGATGTGACAGGAATAACTACAGGGAAAGGTTTTCAGGGAGTGATGAAAAGGCATGGTTTTTCAGGAATGCCGGCATCCCACGGAGCATCACTATCCCATAGAAGTGGTGGTTCTACGGGTCAGAGGGATGCTCCTGGAAAGGTCTTCAAAGGTAGAAAGATGGCTGGGCGCATGGGTGGGAAGCAGAGAACTGTGAAAAATGTGTGGATATACAAAATTGATCCTGCAAGAAACTTGATATGGGTGAGAGGACAAGTCCCTGGCACCGAAGGAAACTTTGTATTTATAAAGGATGCTGTCTACAAGAAACTCAATAAGTCGGTTCTTCCATTTCCTACGTACTTTGCAGCTGACAACGAGGACACAGAGAAGTTGGAACCTCTTGTTGCTGATCTTGGAGAAGTAGATCCATTTATGGCGGTCAGCCCAATCTTCCATTCCTCCATTTTTCTTCTTCTTAAACATCCTTTCAAGGTTTTTCTCTCTCTCTTCTTTAAGCTTCAGAGCCCCACCTTCCCTTCCATCGGATTCTCTCTCTCCGCCTCTCATTCTAGGGTTTCTGTTCCGGCGAATGCTGCTGCTGTTGCTGTTGCTGTTGCTGTTCCTCCGATGAATCGCTCACACTGCAACCAACTTCAATCCAATTCCATTTCTCACTGCCAAGAATGCGGCATCTCCCAATCCGCCTGTTGGATCCTCCACAATGTCCGTCTCAAAGCCTCCTTCCGTCGTCTCTGCACCAATTGCGTCCTCAAGCACAATCTCCCCCGTTTCTGTCCTCTTTGCTTCGACGTTTACGACGATTCGACTCCTCCACCATCTCATCAGCGAGTTATGTGCTTCAGATGCCCTTCAATCTCTCATCTCTCTTGCGCTTCCTTTCGTTTTTCGTCTAACTTCCTATGCCCTCTCTGCTCCGATCCTTGTTTTTCATTCTTCGATGGTTTTAACTCCGGCGGCCTTTGTCAATCTGAGTCCAACGTCGCCTTTTTGGCCGGGAGAAGCGTTGATGGTAAATCAGCGAAAGCGATTGTCGCTGCGGCTCGTGTCTCAGCTCAATCCATGCGGAGAGCAGCTCTCGATGCTAGGGCTGTAGCGGAGATGAAGATCAAGAATGCTGCCTTTGCTAAGAAACAAGCTACTCTCGCATTGGAACGGCTTGCTTATCTTGTGCTTCAGGAGAAGGACAAAAATGGATATGCTAAAACTAATGGAGATGCTGTTGCTGGGGAATCAAACTACGTAGCGGACCAATCGATTTTGACGAAGAATCTCATAGCTTTTATGGGCGTGGACGCCATTGTTGCCACCTTTGAGCTACTAGAATCGCCAATTGGCCCATTGCAGAATGGAGCCACGGCGGGCATTTTTGATATTCAAATGCCAGTTTCGGCGGCGATCGCGGCGGCGGCGGAGGTAGATTGTGATGTATATTTTCTCGTAAAATTGACTATTTCCGCTTCTTCGTTGTCTCTTCAAAACTGCCATTTTCAATTTCTCGAGCATTCAACCAGTAAAGTTCGGTTCTGCTGCGACTTCTCTGAGTTGCCATTTCCCTTCGTTTGGTTCAGATGA

Coding sequence (CDS)

ATGAAATTCCAGAGTCTCCAAGCTTTATCCAGAGGTCTCATTTCTCGTCTTCGTCTTCTCTCGATCAATTCCGGCACTTCTCATACAAGTATTTCTTCTTCTTCTTCAAGGACAAATGCGTCTTGTTACTATTTCGCCCGTGCTTTCAGTACCCAGGATTTGATCCAGGCCAGCGATGGGTCTTTGTCATCTTCTTCGATTATTGAAGCTAAACCTGGTGTTATGGCCCCTAACTCGAAGCGGACGGGTGTTATTGCCGTCAAGTGTGGAATGTCGGCGCTGTGGGATAAATGGGGAGCTAGGATACCCGTCACTGTGCTCTGGGTTGATGATAATATTGTTTCACAGGTCAAGACCATTGAGAAAGAAGGTATCACAGCTCTCCAGATTGGCTGTGGACAGAAGAAGGCGAAGCATTTGACAAAACCTGAGTTAGGCCATTTTAGGGCTCAAGGTGTTCCATTAAAAAGGAAATTGAAGGAGTTCCCGGTGTCAGAAGATGCACTTCTTCCAGTTGGTACAGCAATTGGCGTTCGTCATTTTGTTCCTGGACAGTATGTTGATGTGACAGGAATAACTACAGGGAAAGGTTTTCAGGGAGTGATGAAAAGGCATGGTTTTTCAGGAATGCCGGCATCCCACGGAGCATCACTATCCCATAGAAGTGGTGGTTCTACGGGTCAGAGGGATGCTCCTGGAAAGGTCTTCAAAGGTAGAAAGATGGCTGGGCGCATGGGTGGGAAGCAGAGAACTGTGAAAAATGTGTGGATATACAAAATTGATCCTGCAAGAAACTTGATATGGGTGAGAGGACAAGTCCCTGGCACCGAAGGAAACTTTGTATTTATAAAGGATGCTGTCTACAAGAAACTCAATAAGTCGGTTCTTCCATTTCCTACGTACTTTGCAGCTGACAACGAGGACACAGAGAAGTTGGAACCTCTTGTTGCTGATCTTGGAGAAGTAGATCCATTTATGGCGGTCAGCCCAATCTTCCATTCCTCCATTTTTCTTCTTCTTAAACATCCTTTCAAGGTTTTTCTCTCTCTCTTCTTTAAGCTTCAGAGCCCCACCTTCCCTTCCATCGGATTCTCTCTCTCCGCCTCTCATTCTAGGGTTTCTGTTCCGGCGAATGCTGCTGCTGTTGCTGTTGCTGTTGCTGTTCCTCCGATGAATCGCTCACACTGCAACCAACTTCAATCCAATTCCATTTCTCACTGCCAAGAATGCGGCATCTCCCAATCCGCCTGTTGGATCCTCCACAATGTCCGTCTCAAAGCCTCCTTCCGTCGTCTCTGCACCAATTGCGTCCTCAAGCACAATCTCCCCCGTTTCTGTCCTCTTTGCTTCGACGTTTACGACGATTCGACTCCTCCACCATCTCATCAGCGAGTTATGTGCTTCAGATGCCCTTCAATCTCTCATCTCTCTTGCGCTTCCTTTCGTTTTTCGTCTAACTTCCTATGCCCTCTCTGCTCCGATCCTTGTTTTTCATTCTTCGATGGTTTTAACTCCGGCGGCCTTTGTCAATCTGAGTCCAACGTCGCCTTTTTGGCCGGGAGAAGCGTTGATGGTAAATCAGCGAAAGCGATTGTCGCTGCGGCTCGTGTCTCAGCTCAATCCATGCGGAGAGCAGCTCTCGATGCTAGGGCTGTAGCGGAGATGAAGATCAAGAATGCTGCCTTTGCTAAGAAACAAGCTACTCTCGCATTGGAACGGCTTGCTTATCTTGTGCTTCAGGAGAAGGACAAAAATGGATATGCTAAAACTAATGGAGATGCTGTTGCTGGGGAATCAAACTACGTAGCGGACCAATCGATTTTGACGAAGAATCTCATAGCTTTTATGGGCGTGGACGCCATTGTTGCCACCTTTGAGCTACTAGAATCGCCAATTGGCCCATTGCAGAATGGAGCCACGGCGGGCATTTTTGATATTCAAATGCCAGTTTCGGCGGCGATCGCGGCGGCGGCGGAGGTAGATTGTGATGTATATTTTCTCGTAAAATTGACTATTTCCGCTTCTTCGTTGTCTCTTCAAAACTGCCATTTTCAATTTCTCGAGCATTCAACCAGTAAAGTTCGGTTCTGCTGCGACTTCTCTGAGTTGCCATTTCCCTTCGTTTGGTTCAGATGA

Protein sequence

MKFQSLQALSRGLISRLRLLSINSGTSHTSISSSSSRTNASCYYFARAFSTQDLIQASDGSLSSSSIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFVPGQYVDVTGITTGKGFQGVMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFPTYFAADNEDTEKLEPLVADLGEVDPFMAVSPIFHSSIFLLLKHPFKVFLSLFFKLQSPTFPSIGFSLSASHSRVSVPANAAAVAVAVAVPPMNRSHCNQLQSNSISHCQECGISQSACWILHNVRLKASFRRLCTNCVLKHNLPRFCPLCFDVYDDSTPPPSHQRVMCFRCPSISHLSCASFRFSSNFLCPLCSDPCFSFFDGFNSGGLCQSESNVAFLAGRSVDGKSAKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYAKTNGDAVAGESNYVADQSILTKNLIAFMGVDAIVATFELLESPIGPLQNGATAGIFDIQMPVSAAIAAAAEVDCDVYFLVKLTISASSLSLQNCHFQFLEHSTSKVRFCCDFSELPFPFVWFR

Homology

[Close]

BLAST of CmUC05G087990 vs. NCBI nr
Match: XP_038881747.1 (50S ribosomal protein L3-2, mitochondrial [Benincasa hispida])

HSP 1 Score: 592.4 bits (1526), Expect = 5.1e-165
Identity = 296/321 (92.21%), Postives = 304/321 (94.70%), Query Frame = 0


Query: 6   LQALSRGLISRLRLLSINSGTSHTSISSSSSRTNASCYYFARAFSTQDLIQASDGSLSSS 65
           + ALSRGLISR RLLSINSG SHT  SSSSSRTNASCYYF RAFSTQDLIQASDGSL SS
Sbjct: 1   MSALSRGLISRFRLLSINSGASHTITSSSSSRTNASCYYFFRAFSTQDLIQASDGSLPSS 60

Query: 66  SIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEKEGI 125
           SIIEAKP VM PNSKRTGVIAVKCGM+ALWDKWGARIP+TVLWVDDNIVSQVKTIEKEGI
Sbjct: 61  SIIEAKPRVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIEKEGI 120

Query: 126 TALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFVPGQ 185
           TALQIGCGQKKAKHLTKPE+GHFRAQGVPLKRKL+EFPVSEDALLPVGTAIGVRHFVPGQ
Sbjct: 121 TALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHFVPGQ 180

Query: 186 YVDVTGITTGKGFQGVMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRM 245
           YVDVTGI+ GKGFQGVMKRH F GMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRM
Sbjct: 181 YVDVTGISRGKGFQGVMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRM 240

Query: 246 GGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFPTYFAAD 305
           GGKQRTVKNVWIYKIDPARNLIWVRGQVPG EGNFVFIKDA YKKLNKS+LPFPTYFA D
Sbjct: 241 GGKQRTVKNVWIYKIDPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKSILPFPTYFATD 300

Query: 306 NEDTEKLEPLVADLGEVDPFM 327
           +ED E LEPLVADLGEVDPFM
Sbjct: 301 DEDMENLEPLVADLGEVDPFM 321

[Close]

BLAST of CmUC05G087990 vs. NCBI nr
Match: XP_004147630.1 (50S ribosomal protein L3-2, mitochondrial [Cucumis sativus] >KGN57206.1 hypothetical protein Csa_010606 [Cucumis sativus])

HSP 1 Score: 573.2 bits (1476), Expect = 3.2e-159
Identity = 289/325 (88.92%), Postives = 301/325 (92.62%), Query Frame = 0


Query: 6   LQALSRGLISRLRLLSINSGTSH---TSISSSSSRTNASCYYFARAFSTQDLIQASDGSL 65
           + ALSRGLISR RLLSINS  SH   TS SSSSSRTNASCYYF RAFSTQDL QASDGSL
Sbjct: 1   MSALSRGLISRFRLLSINSSASHSITTSSSSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 66  SSSSIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEK 125
           S+SSI EAKPG M  NS RTGVIAVKCGMSALWDKWGARIP+TVLWVDDNIVSQVKTIEK
Sbjct: 61  SASSIFEAKPGTMGSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 126 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFV 185
           EGITALQIGCGQKK KHL+KPELGHFRAQGVPLKRKL+EFPVS+DALLPVGT IGVRHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGVRHFV 180

Query: 186 PGQYVDVTGITTGKGFQGVMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 245
           PGQYVDVTGI+ GKGFQGVMKRHGF GMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 246 GRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKS-VLPFPTY 305
           GRMGGKQRTVKNVWIYKIDPARNL+WV+G +PG EGNFVFIKDAVYKKLNKS +LPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLMWVKGPIPGAEGNFVFIKDAVYKKLNKSAILPFPTY 300

Query: 306 FAADNEDTEKLEPLVADLGEVDPFM 327
           FA D EDT+KLEPLVADLGEVDPFM
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFM 325

[Close]

BLAST of CmUC05G087990 vs. NCBI nr
Match: XP_008438999.1 (PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Cucumis melo] >ADN34039.1 50S ribosomal protein l3 [Cucumis melo subsp. melo])

HSP 1 Score: 571.2 bits (1471), Expect = 1.2e-158
Identity = 287/325 (88.31%), Postives = 303/325 (93.23%), Query Frame = 0


Query: 6   LQALSRGLISRLRLLSINSGTSHTSIS---SSSSRTNASCYYFARAFSTQDLIQASDGSL 65
           + ALSRGLISRLRLLSINSG SH+  S   SSSSRTNASCYYF RAFSTQDL QASDGSL
Sbjct: 1   MSALSRGLISRLRLLSINSGASHSVTSSSYSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 66  SSSSIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEK 125
            +SSIIEAKPG M+ NS+RTGVIAVKCGMSALWDKWGARIP+TVLWVDDNIVSQVKTIEK
Sbjct: 61  PASSIIEAKPGTMSSNSRRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 126 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFV 185
           EGITALQIGCGQKK KHL+KPELGHFRAQGVPLKRKLKEFPVS+DALLPVGT IG RHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLKEFPVSQDALLPVGTEIGARHFV 180

Query: 186 PGQYVDVTGITTGKGFQGVMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 245
           PGQYVDVTGI+ GKGFQGVMKRHGF GMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 246 GRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKS-VLPFPTY 305
           GRMGGKQRTVKNVWIYKIDPARNLIWV+G +PG EG+FVFIKDA+YK+LNKS +LPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVKGPIPGAEGSFVFIKDAMYKRLNKSAILPFPTY 300

Query: 306 FAADNEDTEKLEPLVADLGEVDPFM 327
           FA D EDT+KLEPLVADLGEVDPFM
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFM 325

[Close]

BLAST of CmUC05G087990 vs. NCBI nr
Match: XP_022138212.1 (50S ribosomal protein L3-2, chloroplastic [Momordica charantia])

HSP 1 Score: 563.9 bits (1452), Expect = 1.9e-156
Identity = 282/321 (87.85%), Postives = 298/321 (92.83%), Query Frame = 0


Query: 6   LQALSRGLISRLRLLSINSGTSHTSISSSSSRTNASCYYFARAFSTQDLIQASDGSLSSS 65
           + ALSRGL+SR RLLSINSG S T IS SSSRT+ SCYYF R+FS++DLIQA D S  SS
Sbjct: 1   MSALSRGLVSRFRLLSINSGASST-ISPSSSRTHPSCYYFFRSFSSEDLIQAGDVSSPSS 60

Query: 66  SIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEKEGI 125
            IIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIP+TVLWVDDNIVSQVKTIEKEGI
Sbjct: 61  PIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGI 120

Query: 126 TALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFVPGQ 185
           TALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKL+EFPVS DALLPVGT IGVRHFVPGQ
Sbjct: 121 TALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFVPGQ 180

Query: 186 YVDVTGITTGKGFQGVMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRM 245
           YVDVTGIT GKGFQGVMKRHGF GMPASHGASLSHRS GSTGQRDAPGKVFKG+KM GRM
Sbjct: 181 YVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMPGRM 240

Query: 246 GGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFPTYFAAD 305
           GGKQRTVKNVW+YKIDPARNLIWV+GQVPG EGNFVFIKDA YKK +KS+LPFPTYFA +
Sbjct: 241 GGKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFATE 300

Query: 306 NEDTEKLEPLVADLGEVDPFM 327
           +ED+EKLEPLVADLGEVDPFM
Sbjct: 301 DEDSEKLEPLVADLGEVDPFM 320

[Close]

BLAST of CmUC05G087990 vs. NCBI nr
Match: KAA0052153.1 (50S ribosomal protein L3-2 [Cucumis melo var. makuwa] >TYK05118.1 50S ribosomal protein L3-2 [Cucumis melo var. makuwa])

HSP 1 Score: 562.0 bits (1447), Expect = 7.4e-156
Identity = 283/321 (88.16%), Postives = 299/321 (93.15%), Query Frame = 0


Query: 6   LQALSRGLISRLRLLSINSGTSHTSIS---SSSSRTNASCYYFARAFSTQDLIQASDGSL 65
           + ALSRGLISRLRLLSINSG SH+  S   SSSSRTNASCYYF RAFSTQDL QASDGSL
Sbjct: 1   MSALSRGLISRLRLLSINSGASHSVTSSSYSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 66  SSSSIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEK 125
            +SSIIEAKPG M+ NS+RTGVIAVKCGMSALWDKWGARIP+TVLWVDDNIVSQVKTIEK
Sbjct: 61  PASSIIEAKPGTMSSNSRRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 126 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFV 185
           EGITALQIGCGQKK KHL+KPELGHFRAQGVPLKRKLKEFPVS+DALLPVGT IG RHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLKEFPVSQDALLPVGTEIGARHFV 180

Query: 186 PGQYVDVTGITTGKGFQGVMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 245
           PGQYVDVTGI+ GKGFQGVMKRHGF GMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 246 GRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKS-VLPFPTY 305
           GRMGGKQRTVKNVWIYKIDPARNLIWV+G +PG EG+FVFIKDA+YK+LNKS +LPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVKGPIPGAEGSFVFIKDAMYKRLNKSAILPFPTY 300

Query: 306 FAADNEDTEKLEPLVADLGEV 323
           FA D EDT+KLEPLVADLGEV
Sbjct: 301 FATDGEDTDKLEPLVADLGEV 321

[Close]

BLAST of CmUC05G087990 vs. ExPASy Swiss-Prot
Match: Q9LRN8 (50S ribosomal protein L3-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL3B PE=1 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 1.6e-129
Identity = 239/325 (73.54%), Postives = 270/325 (83.08%), Query Frame = 0


Query: 6   LQALSRGLISRL-RLLSINSGTSHTSISSSSSRTNASCYYFARAFSTQDLIQASDGS--- 65
           + A+ RGL+SR+ + LSI S T     SSS S  + S ++  R FS+   +    GS   
Sbjct: 1   MAAVPRGLLSRINQFLSIRSITP----SSSESLPHCSSFFLIRRFSSDTGLMDGGGSDII 60

Query: 66  LSSSSIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIE 125
            + + IIEAK G M+  SKRTG+IAVKCGM+ALWDKWG RIP+++LWVDDNIVSQVKT+E
Sbjct: 61  GAQTRIIEAKQGEMSSRSKRTGIIAVKCGMTALWDKWGKRIPISILWVDDNIVSQVKTVE 120

Query: 126 KEGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHF 185
           KEGI ALQIGCGQKK KHL+K  +GHFRAQGVPLKRKL+EFPV+EDALLPVGT++GVRHF
Sbjct: 121 KEGIFALQIGCGQKKPKHLSKAVVGHFRAQGVPLKRKLREFPVTEDALLPVGTSLGVRHF 180

Query: 186 VPGQYVDVTGITTGKGFQGVMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKM 245
           VPGQYVDVTGIT GKGFQG MKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKM
Sbjct: 181 VPGQYVDVTGITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKM 240

Query: 246 AGRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFPTY 305
           AGRMG  QRTVKNVW+YKIDPARNL+WVRGQVPG EGNFVFIKDA  KK + S LPFPTY
Sbjct: 241 AGRMGADQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAWCKKPDISKLPFPTY 300

Query: 306 FAADNEDTEKLEPLVADLGEVDPFM 327
            A ++ED  +LEPLVADLGEVDPFM
Sbjct: 301 LAPEDEDPSELEPLVADLGEVDPFM 321

[Close]

BLAST of CmUC05G087990 vs. ExPASy Swiss-Prot
Match: Q5NQ64 (50S ribosomal protein L3 OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) OX=264203 GN=rplC PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 7.9e-60
Identity = 122/238 (51.26%), Postives = 160/238 (67.23%), Query Frame = 0


Query: 81  RTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHL 140
           RTGVIA K GM+ L+ + G  +PVTVL ++D  V  VK  +++G  A+Q+G G  KAK++
Sbjct: 2   RTGVIAKKVGMTRLFQEDGRHVPVTVLKLEDVQVVAVKNKDQDGYVAVQLGAGSAKAKNV 61

Query: 141 TKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFVPGQYVDVTGITTGKGFQG 200
           TKP  GHF    V LK KL EFPVSEDA+L VGT+I   HF+ GQ VD++G T GKGF G
Sbjct: 62  TKPVRGHFAKAEVELKAKLVEFPVSEDAVLEVGTSISADHFIAGQLVDISGQTQGKGFAG 121

Query: 201 VMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKI 260
            MKR GF G+ A+HG SLSHRS GSTG R  PG+VFK +KMAG MG +QRT +N+ +   
Sbjct: 122 AMKRWGFGGLRATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGARQRTQQNLEVIST 181

Query: 261 DPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFPTYFAADNEDTEKLEPLVAD 319
           D  R+LI+VRG VPG++G ++ I+DAV K    +  P+P    A N +     P+ A+
Sbjct: 182 DAERDLIFVRGSVPGSKGAWLIIRDAV-KVARPTDAPYPAAIKAANGNEAPAAPVAAE 238

[Close]

BLAST of CmUC05G087990 vs. ExPASy Swiss-Prot
Match: Q2G8Y0 (50S ribosomal protein L3 OS=Novosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CCUG 56034 / CIP 105152 / NBRC 16084 / F199) OX=279238 GN=rplC PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 5.6e-58
Identity = 116/231 (50.22%), Postives = 160/231 (69.26%), Query Frame = 0


Query: 81  RTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHL 140
           RTGVIA K GM+ L+ + G  +PVTVL +++  V  V+T E++G  ALQ+G G+ K K++
Sbjct: 2   RTGVIAKKVGMTRLFQEDGRHVPVTVLSLENCQVVSVRTAERDGYVALQLGAGEAKQKNV 61

Query: 141 TKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFVPGQYVDVTGITTGKGFQG 200
            KP+  HF    VPLK ++ EF V++DALL VG+ I   HFVPGQYVD+TG T GKGFQG
Sbjct: 62  AKPQREHFAKAEVPLKMEVAEFRVADDALLDVGSTIAASHFVPGQYVDITGQTQGKGFQG 121

Query: 201 VMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKI 260
            MKR GF GM A+HG S+SHR+ GSTG R  PG+VFK +KMAG MG +QRT +N+ + + 
Sbjct: 122 AMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEVVRT 181

Query: 261 DPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFPTYF--AADNEDT 310
           D  R LI+V+G VPG++  ++ ++DAV K    +  P+P     AA++ D+
Sbjct: 182 DDERGLIFVKGSVPGSKNAWLLVRDAV-KVSRHAEAPYPAGLKQAANSNDS 231

[Close]

BLAST of CmUC05G087990 vs. ExPASy Swiss-Prot
Match: Q5FTY3 (50S ribosomal protein L3 OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rplC PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 2.1e-57
Identity = 118/219 (53.88%), Postives = 148/219 (67.58%), Query Frame = 0


Query: 81  RTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHL 140
           RTG+IA K GM+ L+ + G  +PVTVL +D+  V   +T E++G TA+Q+G G  K K++
Sbjct: 2   RTGLIAKKLGMTRLFKEDGTHVPVTVLHLDNVEVVDARTNERDGYTAIQLGLGNAKVKNV 61

Query: 141 TKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFVPGQYVDVTGITTGKGFQG 200
           TK   GHF    V  KR L EF VSEDALL  GT +   HFV GQ VDVTG + GKGF G
Sbjct: 62  TKANRGHFARTKVEPKRHLAEFRVSEDALLEAGTKLSAAHFVVGQKVDVTGQSKGKGFAG 121

Query: 201 VMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKI 260
           VMKRH F+G+ ASHG S+SHRS GSTGQR  PGKVFKG+KMAG MG ++ T  N+ I  +
Sbjct: 122 VMKRHNFAGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGDERVTTLNLEIAAV 181

Query: 261 DPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFP 300
           D  RNLI VRG +PG +   V I+DA+ KK   +  P+P
Sbjct: 182 DEERNLIMVRGAIPGAKNGLVLIRDAI-KKARHADAPYP 219

[Close]

BLAST of CmUC05G087990 vs. ExPASy Swiss-Prot
Match: Q2N9B1 (50S ribosomal protein L3 OS=Erythrobacter litoralis (strain HTCC2594) OX=314225 GN=rplC PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.1e-56
Identity = 120/244 (49.18%), Postives = 159/244 (65.16%), Query Frame = 0


Query: 81  RTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHL 140
           RTGVIA K GM+ L+ + G  +PVTVL ++D  V   +T E++G  ALQ+G G  K K++
Sbjct: 2   RTGVIAKKVGMTRLFQEDGRHVPVTVLALEDCQVVSQRTQERDGYFALQVGSGVAKQKNV 61

Query: 141 TKPELGHFRAQGVPLKRKLKEFPV-SEDALLPVGTAIGVRHFVPGQYVDVTGITTGKGFQ 200
            KP+   F    V LK K+ EF V  ED LLPVG AI   HF+ GQ VD+TG T GKGF 
Sbjct: 62  AKPQREAFAKAEVGLKMKVAEFRVEGEDGLLPVGAAISAEHFIAGQKVDITGYTQGKGFA 121

Query: 201 GVMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYK 260
           G MKR GF G+ A+HG S+SHRS GSTG R  PG+VFKG+KMAG MG +QRT +N+ + +
Sbjct: 122 GAMKRWGFGGLRATHGVSISHRSHGSTGNRQDPGRVFKGKKMAGHMGDRQRTQQNLEVVR 181

Query: 261 IDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFPTYFAADNEDTEKLEPLVADL 320
            DP R LI+V+G VPGT+ +++ I+DAV   L + V PFP      N   ++ +   AD 
Sbjct: 182 TDPERGLIFVKGSVPGTKNSWMLIRDAVKLPLPEGV-PFPGAVVEKNAPAKEADAPAADE 241

Query: 321 GEVD 324
            ++D
Sbjct: 242 QKLD 244

[Close]

BLAST of CmUC05G087990 vs. ExPASy TrEMBL
Match: A0A0A0LAV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171140 PE=3 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 1.5e-159
Identity = 289/325 (88.92%), Postives = 301/325 (92.62%), Query Frame = 0


Query: 6   LQALSRGLISRLRLLSINSGTSH---TSISSSSSRTNASCYYFARAFSTQDLIQASDGSL 65
           + ALSRGLISR RLLSINS  SH   TS SSSSSRTNASCYYF RAFSTQDL QASDGSL
Sbjct: 1   MSALSRGLISRFRLLSINSSASHSITTSSSSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 66  SSSSIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEK 125
           S+SSI EAKPG M  NS RTGVIAVKCGMSALWDKWGARIP+TVLWVDDNIVSQVKTIEK
Sbjct: 61  SASSIFEAKPGTMGSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 126 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFV 185
           EGITALQIGCGQKK KHL+KPELGHFRAQGVPLKRKL+EFPVS+DALLPVGT IGVRHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGVRHFV 180

Query: 186 PGQYVDVTGITTGKGFQGVMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 245
           PGQYVDVTGI+ GKGFQGVMKRHGF GMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 246 GRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKS-VLPFPTY 305
           GRMGGKQRTVKNVWIYKIDPARNL+WV+G +PG EGNFVFIKDAVYKKLNKS +LPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLMWVKGPIPGAEGNFVFIKDAVYKKLNKSAILPFPTY 300

Query: 306 FAADNEDTEKLEPLVADLGEVDPFM 327
           FA D EDT+KLEPLVADLGEVDPFM
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFM 325

[Close]

BLAST of CmUC05G087990 vs. ExPASy TrEMBL
Match: E5GC40 (50S ribosomal protein l3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 5.9e-159
Identity = 287/325 (88.31%), Postives = 303/325 (93.23%), Query Frame = 0


Query: 6   LQALSRGLISRLRLLSINSGTSHTSIS---SSSSRTNASCYYFARAFSTQDLIQASDGSL 65
           + ALSRGLISRLRLLSINSG SH+  S   SSSSRTNASCYYF RAFSTQDL QASDGSL
Sbjct: 1   MSALSRGLISRLRLLSINSGASHSVTSSSYSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 66  SSSSIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEK 125
            +SSIIEAKPG M+ NS+RTGVIAVKCGMSALWDKWGARIP+TVLWVDDNIVSQVKTIEK
Sbjct: 61  PASSIIEAKPGTMSSNSRRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 126 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFV 185
           EGITALQIGCGQKK KHL+KPELGHFRAQGVPLKRKLKEFPVS+DALLPVGT IG RHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLKEFPVSQDALLPVGTEIGARHFV 180

Query: 186 PGQYVDVTGITTGKGFQGVMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 245
           PGQYVDVTGI+ GKGFQGVMKRHGF GMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 246 GRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKS-VLPFPTY 305
           GRMGGKQRTVKNVWIYKIDPARNLIWV+G +PG EG+FVFIKDA+YK+LNKS +LPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVKGPIPGAEGSFVFIKDAMYKRLNKSAILPFPTY 300

Query: 306 FAADNEDTEKLEPLVADLGEVDPFM 327
           FA D EDT+KLEPLVADLGEVDPFM
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFM 325

[Close]

BLAST of CmUC05G087990 vs. ExPASy TrEMBL
Match: A0A1S3AYD1 (50S ribosomal protein L3-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483925 PE=3 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 5.9e-159
Identity = 287/325 (88.31%), Postives = 303/325 (93.23%), Query Frame = 0


Query: 6   LQALSRGLISRLRLLSINSGTSHTSIS---SSSSRTNASCYYFARAFSTQDLIQASDGSL 65
           + ALSRGLISRLRLLSINSG SH+  S   SSSSRTNASCYYF RAFSTQDL QASDGSL
Sbjct: 1   MSALSRGLISRLRLLSINSGASHSVTSSSYSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 66  SSSSIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEK 125
            +SSIIEAKPG M+ NS+RTGVIAVKCGMSALWDKWGARIP+TVLWVDDNIVSQVKTIEK
Sbjct: 61  PASSIIEAKPGTMSSNSRRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 126 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFV 185
           EGITALQIGCGQKK KHL+KPELGHFRAQGVPLKRKLKEFPVS+DALLPVGT IG RHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLKEFPVSQDALLPVGTEIGARHFV 180

Query: 186 PGQYVDVTGITTGKGFQGVMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 245
           PGQYVDVTGI+ GKGFQGVMKRHGF GMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 246 GRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKS-VLPFPTY 305
           GRMGGKQRTVKNVWIYKIDPARNLIWV+G +PG EG+FVFIKDA+YK+LNKS +LPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVKGPIPGAEGSFVFIKDAMYKRLNKSAILPFPTY 300

Query: 306 FAADNEDTEKLEPLVADLGEVDPFM 327
           FA D EDT+KLEPLVADLGEVDPFM
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFM 325

[Close]

BLAST of CmUC05G087990 vs. ExPASy TrEMBL
Match: A0A6J1CAF7 (50S ribosomal protein L3-2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111009440 PE=3 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 9.4e-157
Identity = 282/321 (87.85%), Postives = 298/321 (92.83%), Query Frame = 0


Query: 6   LQALSRGLISRLRLLSINSGTSHTSISSSSSRTNASCYYFARAFSTQDLIQASDGSLSSS 65
           + ALSRGL+SR RLLSINSG S T IS SSSRT+ SCYYF R+FS++DLIQA D S  SS
Sbjct: 1   MSALSRGLVSRFRLLSINSGASST-ISPSSSRTHPSCYYFFRSFSSEDLIQAGDVSSPSS 60

Query: 66  SIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEKEGI 125
            IIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIP+TVLWVDDNIVSQVKTIEKEGI
Sbjct: 61  PIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGI 120

Query: 126 TALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFVPGQ 185
           TALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKL+EFPVS DALLPVGT IGVRHFVPGQ
Sbjct: 121 TALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFVPGQ 180

Query: 186 YVDVTGITTGKGFQGVMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRM 245
           YVDVTGIT GKGFQGVMKRHGF GMPASHGASLSHRS GSTGQRDAPGKVFKG+KM GRM
Sbjct: 181 YVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMPGRM 240

Query: 246 GGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFPTYFAAD 305
           GGKQRTVKNVW+YKIDPARNLIWV+GQVPG EGNFVFIKDA YKK +KS+LPFPTYFA +
Sbjct: 241 GGKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFATE 300

Query: 306 NEDTEKLEPLVADLGEVDPFM 327
           +ED+EKLEPLVADLGEVDPFM
Sbjct: 301 DEDSEKLEPLVADLGEVDPFM 320

[Close]

BLAST of CmUC05G087990 vs. ExPASy TrEMBL
Match: A0A5A7U8A2 (50S ribosomal protein L3-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00220 PE=3 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 3.6e-156
Identity = 283/321 (88.16%), Postives = 299/321 (93.15%), Query Frame = 0


Query: 6   LQALSRGLISRLRLLSINSGTSHTSIS---SSSSRTNASCYYFARAFSTQDLIQASDGSL 65
           + ALSRGLISRLRLLSINSG SH+  S   SSSSRTNASCYYF RAFSTQDL QASDGSL
Sbjct: 1   MSALSRGLISRLRLLSINSGASHSVTSSSYSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 66  SSSSIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIEK 125
            +SSIIEAKPG M+ NS+RTGVIAVKCGMSALWDKWGARIP+TVLWVDDNIVSQVKTIEK
Sbjct: 61  PASSIIEAKPGTMSSNSRRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 126 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHFV 185
           EGITALQIGCGQKK KHL+KPELGHFRAQGVPLKRKLKEFPVS+DALLPVGT IG RHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLKEFPVSQDALLPVGTEIGARHFV 180

Query: 186 PGQYVDVTGITTGKGFQGVMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 245
           PGQYVDVTGI+ GKGFQGVMKRHGF GMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 246 GRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKS-VLPFPTY 305
           GRMGGKQRTVKNVWIYKIDPARNLIWV+G +PG EG+FVFIKDA+YK+LNKS +LPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVKGPIPGAEGSFVFIKDAMYKRLNKSAILPFPTY 300

Query: 306 FAADNEDTEKLEPLVADLGEV 323
           FA D EDT+KLEPLVADLGEV
Sbjct: 301 FATDGEDTDKLEPLVADLGEV 321

[Close]

BLAST of CmUC05G087990 vs. TAIR 10
Match: AT3G17465.1 (ribosomal protein L3 plastid )

HSP 1 Score: 464.9 bits (1195), Expect = 1.1e-130
Identity = 239/325 (73.54%), Postives = 270/325 (83.08%), Query Frame = 0


Query: 6   LQALSRGLISRL-RLLSINSGTSHTSISSSSSRTNASCYYFARAFSTQDLIQASDGS--- 65
           + A+ RGL+SR+ + LSI S T     SSS S  + S ++  R FS+   +    GS   
Sbjct: 1   MAAVPRGLLSRINQFLSIRSITP----SSSESLPHCSSFFLIRRFSSDTGLMDGGGSDII 60

Query: 66  LSSSSIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPVTVLWVDDNIVSQVKTIE 125
            + + IIEAK G M+  SKRTG+IAVKCGM+ALWDKWG RIP+++LWVDDNIVSQVKT+E
Sbjct: 61  GAQTRIIEAKQGEMSSRSKRTGIIAVKCGMTALWDKWGKRIPISILWVDDNIVSQVKTVE 120

Query: 126 KEGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLKEFPVSEDALLPVGTAIGVRHF 185
           KEGI ALQIGCGQKK KHL+K  +GHFRAQGVPLKRKL+EFPV+EDALLPVGT++GVRHF
Sbjct: 121 KEGIFALQIGCGQKKPKHLSKAVVGHFRAQGVPLKRKLREFPVTEDALLPVGTSLGVRHF 180

Query: 186 VPGQYVDVTGITTGKGFQGVMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKM 245
           VPGQYVDVTGIT GKGFQG MKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKM
Sbjct: 181 VPGQYVDVTGITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKM 240

Query: 246 AGRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGTEGNFVFIKDAVYKKLNKSVLPFPTY 305
           AGRMG  QRTVKNVW+YKIDPARNL+WVRGQVPG EGNFVFIKDA  KK + S LPFPTY
Sbjct: 241 AGRMGADQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAWCKKPDISKLPFPTY 300

Query: 306 FAADNEDTEKLEPLVADLGEVDPFM 327
            A ++ED  +LEPLVADLGEVDPFM
Sbjct: 301 LAPEDEDPSELEPLVADLGEVDPFM 321

[Close]

BLAST of CmUC05G087990 vs. TAIR 10
Match: AT2G43030.1 (Ribosomal protein L3 family protein )

HSP 1 Score: 144.8 bits (364), Expect = 2.6e-34
Identity = 95/259 (36.68%), Postives = 140/259 (54.05%), Query Frame = 0


Query: 30  SISSSSSRTNASCYYFARAFSTQDLIQASDGSLSSSSIIEAKPGVMAPNSKRTGVIAVKC 89
           S  S  ++T  S   F   F     + A   SL   S  + +  V +      GV+  K 
Sbjct: 9   SFPSLLNKTTLSSSLFTPTF-----LPAKSSSLLIKSSPKTRFVVSSSMEAGIGVMGSKL 68

Query: 90  GMSALWDKWGARIPVTVL-WVDDNIVSQVKTIEKEGITALQIGCGQKKAKHLTKPELGHF 149
           GM + +++ G  +PVTV+ + + NIV+Q+KT+  +G  A+QIG  + + K LTKPE GH 
Sbjct: 69  GMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKLTKPETGHL 128

Query: 150 RAQGVPLKRKLKEFPVSE-DALLPVGTAIGVRHFVPGQYVDVTGITTGKGFQGVMKRHGF 209
           +  G    R L+EF ++  +   P    +    F  G  VDV G T GKGFQG +KRH F
Sbjct: 129 QKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQGGIKRHHF 188

Query: 210 SGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKIDPARNLI 269
                +HG S SHR+ GS G    PG+V+KG+KM GRMGG +  ++ + I K+D   N++
Sbjct: 189 KRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVKVDKELNVV 248

Query: 270 WVRGQVPGTEGNFVFIKDA 287
            ++G +PG  GN + I  A
Sbjct: 249 MIKGALPGKPGNLLRITPA 261

[Close]

BLAST of CmUC05G087990 vs. TAIR 10
Match: AT1G09520.1 (LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: PHD finger family protein (TAIR:AT3G17460.1); Has 56 Blast hits to 56 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 112.5 bits (280), Expect = 1.4e-24
Identity = 72/188 (38.30%), Postives = 107/188 (56.91%), Query Frame = 0


Query: 401 SNSISHCQECGISQSACWILHNVRLKASFRRLCTNCVLKHNLPRFCPLCFDVYDDSTPPP 460
           +NS   C +CG S +  W++H VRL+AS R  CT+C+L+++   FCP CF +YD S  PP
Sbjct: 20  ANSTERCDDCGSSDA--WVIHTVRLRASLRFFCTHCLLRNHPASFCPGCFALYDSS--PP 79

Query: 461 SHQRVMCF--RCPSISHLSCASFRFSSNFLCPLCSDP-CFSFFDGFNSGGLCQSESNVAF 520
           S +RV C    C S++H+ CA      ++LCP C DP  FSFF              V  
Sbjct: 80  SFRRVSCSIKGCHSLTHIHCAGDESHLSYLCPPCRDPNSFSFF-----------RPIVDE 139

Query: 521 LAGRSVDGKSAKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALERLAYL 580
              R VD   ++A + AA+++A SM +A + A+   + + K AA AKK+A  ALE++  L
Sbjct: 140 NGSRFVDKALSEAFLCAAKIAASSMNKAVMTAKCETDRRGKEAALAKKRAREALEQVVML 192

Query: 581 VLQEKDKN 586
             +EK ++
Sbjct: 200 DAKEKARS 192

[Close]

BLAST of CmUC05G087990 vs. TAIR 10
Match: AT3G17460.1 (PHD finger family protein )

HSP 1 Score: 83.6 bits (205), Expect = 7.2e-16
Identity = 62/184 (33.70%), Postives = 93/184 (50.54%), Query Frame = 0


Query: 420 LHNVRLKASFRRLCTNCVLKHNLPRFCPLCFDVYDDSTPPPSHQRVMCFRCPSISHLSCA 479
           +H V    +FRRLCT+C+LK     FC +CF+++D++ PP +  R++C  CPS +HLSC+
Sbjct: 21  IHTVIKTGAFRRLCTDCLLKEYREHFCSVCFNLFDNAVPPQA--RIICVNCPSSTHLSCS 80

Query: 480 SFRFS--------------SNFLCPLCSDPCFSFFDGFNSGGLCQSESNVAFLAGRSVDG 539
           +   S              S+F C  CS+P F+FF         +S  N        +  
Sbjct: 81  TQPPSSSAASSSSSAPPPASSFTCQPCSNPNFTFFP--------KSRVNEDVPDETPLTP 140

Query: 540 KSAKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKN 590
           KSA A+VAA  +S  +M +A    +  A  KI  A  AK +A  AL  L  +V+++    
Sbjct: 141 KSAMALVAAGNISVANMNKAVALLKEEALKKIIAAKTAKLRAKGALTNLQDIVIRQSKVT 194

The following BLAST results are available for this feature:

BLAST of CmUC05G087990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881747.1	5.1e-165	92.21	50S ribosomal protein L3-2, mitochondrial [Benincasa hispida]	[more]
XP_004147630.1	3.2e-159	88.92	50S ribosomal protein L3-2, mitochondrial [Cucumis sativus] >KGN57206.1 hypothet...	[more]
XP_008438999.1	1.2e-158	88.31	PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Cucumis melo] >ADN34039.1 ...	[more]
XP_022138212.1	1.9e-156	87.85	50S ribosomal protein L3-2, chloroplastic [Momordica charantia]	[more]
KAA0052153.1	7.4e-156	88.16	50S ribosomal protein L3-2 [Cucumis melo var. makuwa] >TYK05118.1 50S ribosomal ...	[more]

BLAST of CmUC05G087990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRN8	1.6e-129	73.54	50S ribosomal protein L3-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL...	[more]
Q5NQ64	7.9e-60	51.26	50S ribosomal protein L3 OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 ...	[more]
Q2G8Y0	5.6e-58	50.22	50S ribosomal protein L3 OS=Novosphingobium aromaticivorans (strain ATCC 700278 ...	[more]
Q5FTY3	2.1e-57	53.88	50S ribosomal protein L3 OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rpl...	[more]
Q2N9B1	1.1e-56	49.18	50S ribosomal protein L3 OS=Erythrobacter litoralis (strain HTCC2594) OX=314225 ...	[more]

BLAST of CmUC05G087990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAV0	1.5e-159	88.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171140 PE=3 SV=1	[more]
E5GC40	5.9e-159	88.31	50S ribosomal protein l3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3AYD1	5.9e-159	88.31	50S ribosomal protein L3-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10348392...	[more]
A0A6J1CAF7	9.4e-157	87.85	50S ribosomal protein L3-2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A5A7U8A2	3.6e-156	88.16	50S ribosomal protein L3-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]

BLAST of CmUC05G087990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17465.1	1.1e-130	73.54	ribosomal protein L3 plastid	[more]
AT2G43030.1	2.6e-34	36.68	Ribosomal protein L3 family protein	[more]
AT1G09520.1	1.4e-24	38.30	LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12...	[more]
AT3G17460.1	7.2e-16	33.70	PHD finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019927	Ribosomal protein L3, bacterial/organelle-type	TIGRFAM	TIGR03625	TIGR03625	coord: 83..284 e-value: 5.8E-75 score: 249.5
IPR019927	Ribosomal protein L3, bacterial/organelle-type	PANTHER	PTHR11229	50S RIBOSOMAL PROTEIN L3	coord: 7..327
IPR019927	Ribosomal protein L3, bacterial/organelle-type	HAMAP	MF_01325_B	Ribosomal_L3_B	coord: 81..287 score: 34.008072
IPR000597	Ribosomal protein L3	PFAM	PF00297	Ribosomal_L3	coord: 179..262 e-value: 1.3E-16 score: 60.6
None	No IPR available	GENE3D	3.30.160.810		coord: 113..176 e-value: 2.3E-22 score: 81.2
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 208..290 e-value: 1.1E-23 score: 85.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..234
None	No IPR available	PANTHER	PTHR11229:SF15	BNAA01G27990D PROTEIN	coord: 7..327
IPR019926	Ribosomal protein L3, conserved site	PROSITE	PS00474	RIBOSOMAL_L3	coord: 181..204
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 76..301

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC05G087990.1	CmUC05G087990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome