CmUC05G086270 (gene) Watermelon (USVL531) v1

Overview
NameCmUC05G086270
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionTransmembrane protein, putative
LocationCmU531Chr05: 5013075 .. 5013598 (-)
RNA-Seq ExpressionCmUC05G086270
SyntenyCmUC05G086270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAACAGACAAACGAAAGTCGAAATTCAAATAAGGATATTGAAAAAGATTTCAGAGTACCTTTTAGTTTTTTCGCCTCTCAACGAACGAAGAGGACGGAGAGGAAGAAGAAGATGATGATGAATTCCACGAGGAAGTGTGATGTGGCAAAAGTCAACAATTCCACGTGGAGAGGGCTTTTGACTCAGCTAGGTCGACATGTAGTCGTACGCTTGTTCCGTCGTTGTAGAAATATCGACATGTCGTTTAACTCACACTTTTAAGTACAGTGGAGTGAAATCATAGACACAACGAAATTGTCTCGGTTTTTTAGGGACGGCGGCGAAGAGAACCGATGAAGGAAACGGCGAAGTTGAATGCGGCGAGGTCCGGCTTGGTGGTGATCGGAGCTCTGGCCTTCGGATACCTGAGCTCACAGCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAAAGCTCTCTTCAACATCCCGATTCCGAACCCTCTGCAATTCCAAAAGACGCCATTTCAAACCGCGATGATTAA

mRNA sequence

ATGCAACAGACAAACGAAAGTCGAAATTCAAATAAGGATATTGAAAAAGATTTCAGAGTACCTTTTAGTTTTTTCGCCTCTCAACGAACGAAGAGGACGGAGAGGAAGAAGAAGATGATGATGAATTCCACGAGGAAGTGTGATGTGGCAAAAGTCAACAATTCCACGTGGAGAGGGCTTTTGACTCAGCTAGGTCGACATGTAGTCGGACGGCGGCGAAGAGAACCGATGAAGGAAACGGCGAAGTTGAATGCGGCGAGGTCCGGCTTGGTGGTGATCGGAGCTCTGGCCTTCGGATACCTGAGCTCACAGCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAAAGCTCTCTTCAACATCCCGATTCCGAACCCTCTGCAATTCCAAAAGACGCCATTTCAAACCGCGATGATTAA

Coding sequence (CDS)

ATGCAACAGACAAACGAAAGTCGAAATTCAAATAAGGATATTGAAAAAGATTTCAGAGTACCTTTTAGTTTTTTCGCCTCTCAACGAACGAAGAGGACGGAGAGGAAGAAGAAGATGATGATGAATTCCACGAGGAAGTGTGATGTGGCAAAAGTCAACAATTCCACGTGGAGAGGGCTTTTGACTCAGCTAGGTCGACATGTAGTCGGACGGCGGCGAAGAGAACCGATGAAGGAAACGGCGAAGTTGAATGCGGCGAGGTCCGGCTTGGTGGTGATCGGAGCTCTGGCCTTCGGATACCTGAGCTCACAGCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAAAGCTCTCTTCAACATCCCGATTCCGAACCCTCTGCAATTCCAAAAGACGCCATTTCAAACCGCGATGATTAA

Protein sequence

MQQTNESRNSNKDIEKDFRVPFSFFASQRTKRTERKKKMMMNSTRKCDVAKVNNSTWRGLLTQLGRHVVGRRRREPMKETAKLNAARSGLVVIGALAFGYLSSQLVFKPYLEKAQSSLQHPDSEPSAIPKDAISNRDD
Homology
BLAST of CmUC05G086270 vs. NCBI nr
Match: KAG7018683.1 (hypothetical protein SDJN02_20554, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 123.6 bits (309), Expect = 1.3e-24
Identity = 63/69 (91.30%), Postives = 64/69 (92.75%), Query Frame = 0

Query: 70  GRRRREPMKETAKLNAARSGLVVIGALAFGYLSSQLVFKPYLEKAQSSLQHPDSEPSAIP 129
           GRRRREPMKE AKLNA RSG+VVIGALAFGYLS  LVFKPYLEKAQSSLQHPDSEPS IP
Sbjct: 27  GRRRREPMKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIP 86

Query: 130 KDAISNRDD 139
           KDAISNRDD
Sbjct: 87  KDAISNRDD 95

BLAST of CmUC05G086270 vs. NCBI nr
Match: KAG6582279.1 (hypothetical protein SDJN03_22281, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-23
Identity = 61/69 (88.41%), Postives = 63/69 (91.30%), Query Frame = 0

Query: 70  GRRRREPMKETAKLNAARSGLVVIGALAFGYLSSQLVFKPYLEKAQSSLQHPDSEPSAIP 129
           GRRRREPMKE AKLNA RSG+VVIGALAFGYLS  LVFKPYLEKAQ SLQHP+SEPS IP
Sbjct: 4   GRRRREPMKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQGSLQHPNSEPSTIP 63

Query: 130 KDAISNRDD 139
           KDAISNRDD
Sbjct: 64  KDAISNRDD 72

BLAST of CmUC05G086270 vs. NCBI nr
Match: KGN57013.1 (hypothetical protein Csa_010432 [Cucumis sativus])

HSP 1 Score: 108.2 bits (269), Expect = 5.6e-20
Identity = 56/61 (91.80%), Postives = 57/61 (93.44%), Query Frame = 0

Query: 77  MKETAKLNAARSGLVVIGALAFGYLSSQLVFKPYLEKAQSSLQHPDSEPSAIPKDAISNR 136
           MKETAKLNAARSGLVVIGALAFGYLS QLVFKPYLEKAQSSLQHP+ EPS IPKDAISN 
Sbjct: 1   MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNL 60

Query: 137 D 138
           D
Sbjct: 61  D 61

BLAST of CmUC05G086270 vs. NCBI nr
Match: KAA0049387.1 (hypothetical protein E6C27_scaffold171G006320 [Cucumis melo var. makuwa] >TYK17172.1 hypothetical protein E5676_scaffold434G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 97.8 bits (242), Expect = 7.6e-17
Identity = 51/61 (83.61%), Postives = 54/61 (88.52%), Query Frame = 0

Query: 77  MKETAKLNAARSGLVVIGALAFGYLSSQLVFKPYLEKAQSSLQHPDSEPSAIPKDAISNR 136
           MKETAKLNAARSGLVVIGALAFGYLS Q+ FKPYLEKAQS LQHP+ EPS I KDA+SN 
Sbjct: 1   MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQSYLQHPEPEPSTILKDAVSNP 60

Query: 137 D 138
           D
Sbjct: 61  D 61

BLAST of CmUC05G086270 vs. NCBI nr
Match: KAG6428064.1 (hypothetical protein SASPL_112313 [Salvia splendens])

HSP 1 Score: 67.8 bits (164), Expect = 8.5e-08
Identity = 36/59 (61.02%), Postives = 42/59 (71.19%), Query Frame = 0

Query: 77  MKETAKLNAARSGLVVIGALAFGYLSSQLVFKPYLEKAQSSLQHPDSEPSAIPKDAISN 136
           M+ TAK NA RSGLVVIGALAFGYL+  L FKPYLEKAQ   QH  +  S+ P D  ++
Sbjct: 1   MRGTAKANAMRSGLVVIGALAFGYLTLHLGFKPYLEKAQLEQQHQSAAASSQPVDTFAD 59

BLAST of CmUC05G086270 vs. ExPASy TrEMBL
Match: A0A0A0L5N1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149930 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.7e-20
Identity = 56/61 (91.80%), Postives = 57/61 (93.44%), Query Frame = 0

Query: 77  MKETAKLNAARSGLVVIGALAFGYLSSQLVFKPYLEKAQSSLQHPDSEPSAIPKDAISNR 136
           MKETAKLNAARSGLVVIGALAFGYLS QLVFKPYLEKAQSSLQHP+ EPS IPKDAISN 
Sbjct: 1   MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNL 60

Query: 137 D 138
           D
Sbjct: 61  D 61

BLAST of CmUC05G086270 vs. ExPASy TrEMBL
Match: A0A5A7U4W2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00160 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 3.7e-17
Identity = 51/61 (83.61%), Postives = 54/61 (88.52%), Query Frame = 0

Query: 77  MKETAKLNAARSGLVVIGALAFGYLSSQLVFKPYLEKAQSSLQHPDSEPSAIPKDAISNR 136
           MKETAKLNAARSGLVVIGALAFGYLS Q+ FKPYLEKAQS LQHP+ EPS I KDA+SN 
Sbjct: 1   MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQSYLQHPEPEPSTILKDAVSNP 60

Query: 137 D 138
           D
Sbjct: 61  D 61

BLAST of CmUC05G086270 vs. ExPASy TrEMBL
Match: A0A4D9A3A6 (Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_033849 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 4.1e-08
Identity = 36/59 (61.02%), Postives = 42/59 (71.19%), Query Frame = 0

Query: 77  MKETAKLNAARSGLVVIGALAFGYLSSQLVFKPYLEKAQSSLQHPDSEPSAIPKDAISN 136
           M+ TAK NA RSGLVVIGALAFGYL+  L FKPYLEKAQ   QH  +  S+ P D  ++
Sbjct: 1   MRGTAKANAMRSGLVVIGALAFGYLTLHLGFKPYLEKAQLEQQHQSAAASSQPVDTFAD 59

BLAST of CmUC05G086270 vs. ExPASy TrEMBL
Match: W9R337 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007349 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.0e-07
Identity = 30/51 (58.82%), Postives = 42/51 (82.35%), Query Frame = 0

Query: 77  MKETAKLNAARSGLVVIGALAFGYLSSQLVFKPYLEKAQSSLQHPDSEPSA 128
           M++  K+NA RSG+VV+GA+AFGYL+  L FKP+LEKAQ S++H  S+PS+
Sbjct: 1   MRDRRKMNAMRSGVVVVGAMAFGYLTLYLGFKPFLEKAQLSVEHSQSQPSS 51

BLAST of CmUC05G086270 vs. ExPASy TrEMBL
Match: A0A2I0L8Y5 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_002446 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 7.7e-07
Identity = 32/51 (62.75%), Postives = 43/51 (84.31%), Query Frame = 0

Query: 77  MKETAKLNAARSGLVVIGALAFGYLSSQLVFKPYLEKAQSSLQHP-DSEPS 127
           M +TAK+NA RSG+VV+GALAFGYLS +L FKPYLE+A+++L+    S+PS
Sbjct: 1   MNQTAKMNAIRSGIVVVGALAFGYLSFRLGFKPYLERAEAALESAGPSQPS 51

BLAST of CmUC05G086270 vs. TAIR 10
Match: AT5G19151.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 5.8e-07
Identity = 29/55 (52.73%), Postives = 36/55 (65.45%), Query Frame = 0

Query: 77  MKETAKLNAARSGLVVIGALAFGYLSSQLVFKPYLEKA-------QSSLQHPDSE 125
           MK T   NA RS +VV+G+LAFGYLS +L +KP+LEKA       QSS QH   +
Sbjct: 1   MKRTVMDNAIRSSVVVLGSLAFGYLSLELGYKPFLEKAEQYERSLQSSQQHQQQD 55

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7018683.11.3e-2491.30hypothetical protein SDJN02_20554, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6582279.11.4e-2388.41hypothetical protein SDJN03_22281, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN57013.15.6e-2091.80hypothetical protein Csa_010432 [Cucumis sativus][more]
KAA0049387.17.6e-1783.61hypothetical protein E6C27_scaffold171G006320 [Cucumis melo var. makuwa] >TYK171... [more]
KAG6428064.18.5e-0861.02hypothetical protein SASPL_112313 [Salvia splendens][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L5N12.7e-2091.80Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149930 PE=4 SV=1[more]
A0A5A7U4W23.7e-1783.61Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A4D9A3A64.1e-0861.02Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_033849 PE=4 SV=1[more]
W9R3372.0e-0758.82Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007349 PE=4 SV=1[more]
A0A2I0L8Y57.7e-0762.75Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_002446 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G19151.15.8e-0752.73unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..138
NoneNo IPR availablePANTHERPTHR33982:SF4OS05G0532800 PROTEINcoord: 77..127
IPR038944Outer envelope membrane protein 7-likePANTHERPTHR33982OUTER ENVELOPE MEMBRANE PROTEIN 7-RELATEDcoord: 77..127

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC05G086270.1CmUC05G086270.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane