CmUC05G084160 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAAGCTTTTTGTAATGCTTTTGTTGGTCGTCGTTGCCGCGGCGCGTAACGTTCCGGGCGGGGATCAGGTGGAGTTCGTGAACGCGGTTGAAGTGAAGGCGGCGGAGCTGCCGAGGGATGGTGGCCGTGGTGATGCTGTTCGTGACGAGAAGAATTTTGTCTATGGCGGAATTGGCGGCTTTGCTGGCATGGGCGGGTACGTACACTTAAAACCACTTTTAACCGTTTACAAACACTTCTTATCGCTCCATTAA ATGGAGAAGCTTTTTGTAATGCTTTTGTTGGTCGTCGTTGCCGCGGCGCGTAACGTTCCGGGCGGGGATCAGGTGGAGTTCGTGAACGCGGTTGAAGTGAAGGCGGCGGAGCTGCCGAGGGATGGTGGCCGTGGTGATGCTGTTCGTGACGAGAAGAATTTTGTCTATGGCGGAATTGGCGGCTTTGCTGGCATGGGCGGGTACGTACACTTAAAACCACTTTTAACCGTTTACAAACACTTCTTATCGCTCCATTAA ATGGAGAAGCTTTTTGTAATGCTTTTGTTGGTCGTCGTTGCCGCGGCGCGTAACGTTCCGGGCGGGGATCAGGTGGAGTTCGTGAACGCGGTTGAAGTGAAGGCGGCGGAGCTGCCGAGGGATGGTGGCCGTGGTGATGCTGTTCGTGACGAGAAGAATTTTGTCTATGGCGGAATTGGCGGCTTTGCTGGCATGGGCGGGTACGTACACTTAAAACCACTTTTAACCGTTTACAAACACTTCTTATCGCTCCATTAA MEKLFVMLLLVVVAAARNVPGGDQVEFVNAVEVKAAELPRDGGRGDAVRDEKNFVYGGIGGFAGMGGYVHLKPLLTVYKHFLSLH Homology
BLAST of CmUC05G084160 vs. NCBI nr
Match: XP_011652752.1 (glycine-rich protein 23 [Cucumis sativus]) HSP 1 Score: 120.9 bits (302), Expect = 5.2e-24 Identity = 60/71 (84.51%), Postives = 63/71 (88.73%), Query Frame = 0
BLAST of CmUC05G084160 vs. NCBI nr
Match: XP_038876527.1 (glycine-rich protein 23-like [Benincasa hispida]) HSP 1 Score: 117.5 bits (293), Expect = 5.7e-23 Identity = 58/71 (81.69%), Postives = 64/71 (90.14%), Query Frame = 0
BLAST of CmUC05G084160 vs. NCBI nr
Match: KAA0049179.1 (putative PE-PGRS family protein PE_PGRS46 [Cucumis melo var. makuwa] >TYK17381.1 putative PE-PGRS family protein PE_PGRS46 [Cucumis melo var. makuwa]) HSP 1 Score: 117.1 bits (292), Expect = 7.5e-23 Identity = 57/71 (80.28%), Postives = 62/71 (87.32%), Query Frame = 0
BLAST of CmUC05G084160 vs. NCBI nr
Match: XP_008439361.1 (PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS46 [Cucumis melo]) HSP 1 Score: 115.5 bits (288), Expect = 2.2e-22 Identity = 56/71 (78.87%), Postives = 61/71 (85.92%), Query Frame = 0
BLAST of CmUC05G084160 vs. NCBI nr
Match: KAE8650313.1 (hypothetical protein Csa_010764 [Cucumis sativus]) HSP 1 Score: 109.8 bits (273), Expect = 1.2e-20 Identity = 54/65 (83.08%), Postives = 57/65 (87.69%), Query Frame = 0
BLAST of CmUC05G084160 vs. ExPASy TrEMBL
Match: A0A5D3CZJ9 (Putative PE-PGRS family protein PE_PGRS46 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002410 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 3.6e-23 Identity = 57/71 (80.28%), Postives = 62/71 (87.32%), Query Frame = 0
BLAST of CmUC05G084160 vs. ExPASy TrEMBL
Match: A0A1S3AYL0 (uncharacterized PE-PGRS family protein PE_PGRS46 OS=Cucumis melo OX=3656 GN=LOC103484176 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.1e-22 Identity = 56/71 (78.87%), Postives = 61/71 (85.92%), Query Frame = 0
BLAST of CmUC05G084160 vs. ExPASy TrEMBL
Match: A0A6J1IHK9 (glycine-rich cell wall structural protein OS=Cucurbita maxima OX=3661 GN=LOC111473638 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 3.8e-20 Identity = 56/71 (78.87%), Postives = 61/71 (85.92%), Query Frame = 0
BLAST of CmUC05G084160 vs. ExPASy TrEMBL
Match: A0A0A0L460 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133210 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 4.1e-19 Identity = 54/69 (78.26%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of CmUC05G084160 vs. ExPASy TrEMBL
Match: A0A6J1G005 (glycine-rich cell wall structural protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449466 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 7.3e-16 Identity = 52/74 (70.27%), Postives = 59/74 (79.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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