CmUC05G082730 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC05G082730
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Pentatricopeptide repeat-containing protein
Location	CmU531Chr05: 2028413 .. 2036258 (+)
RNA-Seq Expression	CmUC05G082730
Synteny	CmUC05G082730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAGACTACCGGTGGAGTGCATCTGTTGCATTTTGGCCTTCACGTCGCCGAAAGATGTTTGCAAAATCGCCGGAGTCTCAACGGCGTTCAGATCCGCCGCCGATTCCGACCTTCTCTGGAGGACTTTTCTGCCGCCGGATTACCGGCAGATTATTGCTCAGTCGTCGTCCTCGCCTTTGTTTTGGTTTCTAAATTCCTTGCCGGAGAAGGCTCTCTATTTCCATCTCTCCGATCATCCACTTCTTATAGGCACTGGAAATTCGGTAATTTCACATTTATTTATCTTTATTATTATTAGTTTTATTCTTTTTACAGGGAGAATATAACTTCCGATCTCGAAATCATTAGATTCTATTGGTTCTGCAAATAAATATAATCTAAGAATTTTTTATCGATTTTAAGGTTAAAGTTTTAAATTCAAATTTTAATTTAGTCTCTATGTTTTCATCCTTCGATGATAAATTATTTGTTTTTATTAACTTTTTTTATATTATGTGTGGAAAATAGAAACTTAGTATATGCACATTCTAGCTCTGATTTCTTAGTTCTAAAGATATAGTGCACCCAAGAAAAAATACTATTCCAATCTCTTTAGGGTTTGTGGTTAGTTTTAAAAAGTTAGAAATTTGAGTTTAGTTTCACTTAACTTCTATATATTTACATATTTATTCTTGAGTGGAATTTTATATACCAACTTAAAAAAGTTGAACATCAAAATTTTCAAAATAAAAGATACTAAATAGAATCTAGAGATTTAATATAGCCCTTAAAATTAAGGTTTGTCAAAATGTAACCAAAATTTCAATGTCTAATTTTATGCAATGATCAAATATCTATAGAATGTATGTATGTAGAACAGAAATATATATATTACACTTTTTGAAAGTCTTAAAATAGGACAAAAACTTTTCCACTACATAAACTCTTGTGTTTTGTTTTGTTTTTCTTCTTTTTTAAAATTGATTCCATTAATTTGAATATGATCAGAGTATTACATTGGAAAAAGATAGTGGAAGTAAATGTTATATGATTGGTTCAAGGGACATAGATGCTACAATGAGACAACCATATTGGACCTGGAAATTTGTCCTCCAATCAAGGTGCCCCATCAACTTTTACCTTTTATCCTTCATTTTTTCTAAAATTATGTATATTAATCTCTTTTTTAATAAGTAAATTTGATAAATATATGTATTTAATATTTAGATTAAATTACAAGTTTAGTCTCATCAATTTTTGTATCTATTTAATAACTTTAAAGAAATGTGTCCATGGCGTCTTAAATTTTCAATTTAATGTGCAATTAGTCCTTGATAATCCCTAGTGCAGTAAATGTTTAAGTCTTATTTGATAATTATTTAGTTTTTTTTTAATATTTTAAAATTAAACTTGTAAACACTAGTAACTTTCATCTATGTTCCTTTTTTTTAAAAAAAATATATATATTTTTGAAAATTTACTTTCTATCAATATTTTGAAAAAACAAGTCAAGTTTTCTTTTCTTTTTTTTTTTAAAAGGTTTTTCAAAAATATTTTTCTTTTTAGAATTTGACCAATTTCTTTTTAAATTTTACTTTCTACCTACAAGTGTTTTTACAAGATCGATAGTTCAAATTTTAATTAAAAGAAAACAAACATACTTTTCAAACAGATTTTTCGAGCCCATTAGACAAATTTCAATTTTAAAATTTCCTACCATGTTAGTTACTTTTGAAAGTATTTAGGCAAATAAATGATATTTAGATTAAATTACTAAGTTTTAGTTCCCAACTTTAAATTACATGTGACGGTTTAATCTAACTTTAAGAAATTGTTAAATATGACGACTATAAAAATAAATAAATAATCTATTTAAACATTTTTTAAAGTTTTATAGATCAAATAGACAAACTTATAGTCATACTCTAACTCTAATATTTGTTATTAAGTATAGATTCTTTGAAGCGGCTGATGTACATTCAACAATAACTACACTTCGAATGAAAGGGAAGATAGAAGCCAAAAATTTGAGTCCAAAGACCTACTATGTAGTTTATTTTGTGTTCAAGTTTAAGCATGGGATACAAGAATACTCACATACTTCTTGTCCCTTCAAACCAATTCGATCATACCTTTGTCTTCAAGGGGAGGAGAAGAAGGTGAGAGTAGTAGATGCTTTTGAAGGCTTTCCTATGGAAAGAAAAGATGGATGGATGGAGATTGAAATGGGCCAATTTTTTAATCATGGAGATGATGCCTCAATTATTTTCAGTGTTTTTCCCACTTGTGTAAGTTGTATGTTAGTATTTGAAGGAATCGAGTTTAGGCCAATCTCATAACTATATATCGTTTTTAGTACAATAATGGTAGAAGTTAAGGAATTGAAACTTCGATCTCTAAGGATAGAAGTGTATGTCAATATCGCTGAGCTAAGCCCACTTTGGCAATCTCATAACTATATGGTTGGTTGATCTTTAACTTTTAATTTTGTTTCTCTATTATGGGTCTAATAGGTCTTTGATATATTCAATTCTTTTTAGAAAAATGAAGCTGATCTATTGGGCATAATTTTTAATTTTATGGCTGATAAATTTATAAAGCCCTATTTCATAACCATTCGGTTTTTTAAAGTTAAGTTTATTTTTCATCAACTTCTTACAATAGTTTGCATTTTTCTTAAGTAAAAGGGTTGATTTTTTCGCCGAATTTCAAATTCAAAAAACAAAAATTTAAAAACTTTAATTGATTTTTTAAAACATGGGTAAAAAAGTAGATAACCGAATAAGAAAGGAAAAAAATGTTTATAGACTTAATTTTCAAAAACTAAAATAAAAGAACTAAGGCCCTAACCATTTTGTTTTGAGTTTTTTATTTTTCAAAATTAAGCCTATTTTCTTACTTTTTTTTACCATGATTTGCATTTTTCGAGTAAAAGAGTTGAATTCTTAGTTAAATTCAAAAAACAAAAACAAGTTTGTAAAAACTTTTTTTTTTTTTTTTTCAAAATTTGTCTTGATTTTTTAAAACATGGGTAAATAGTAGATAAGACAACAAGAAATTTAGAGGGGCGAGGAGTTTTGTAAGCTTAATTTTAAAAAAAACTAAGGTTGCGGTTACCTTGAAAATTAAGTTTATTATCTCTATTTTGCATCTTGCTTAGGCTTAATTTACAGGTGAAAGTAGTCAAAAACAAAAACAAAAACTACAAATGGTTACCAGACGAAACTTAAATAGTTATCAAATAAGATTTACATAGCTATCAAACAAGCCCTAAATTATCAATTTTTGCCTAGTAGATACTATAACGAATGACATGTGTTAATAGACAGAAAAAAAGTTAGAAATTAAAATTTATAAATTTACTAGATACCACATTGAAAAATAAACTAAAAATAAATAAAATATAGCATAATAATAGCAACCATGCCCCATTCGTGTGCATGCTTTTTTCTTGTTTTTGCTTGTTTTTTTTATTATTAATTATTATTATTTTTTTTTGCATCTAAAATTTATGCTCTCACATCTATTTGTTTTTAAGATTTACTTTCAAATCTATAAATAACTGCAGGCAACTTTGATACACGTGATACATATTTTGAGAGTGATAGTTAAATTTCTAATTTTAGAGAAAAAAAAAAAAAAGGAAAAACAAAGTGGGGCTAATTTAAACCATGAGTGGGCAAATTTTACTTAAAAAAGGAAGGAAAAAAAAAAAAAAAAGAAGAAAATAAAATAACAAAAAGTGGGGCTAATTTTGTGGGGGGTGATTTTCATCTATCACCATTTCAACCATTCTAAAATTGAAGTTAAATGATTTCAAATATTTTCAAAATCAATTTCAATATTTCTCCAACATAATTTTAACAAATAGCTGCCGATCAGAATTAAAATATCAATGTAGATATCTATATCGAAACTTCAATTTTACAGACATATCGATAAAATATCAATATCGATGAATATTTTTGTAAATAAAAAAATTTAGAAAATTAGGTTAGATTAATAATTAAATTATTTTTACTCTCAAACTAACTATCGATATTGTTATCAATATTTCTATTCATATTAGATTAAGTAGATGATATTATTTATATTTTACGAGAATATTTAATATCGATATTGAATCTTTTGATTTACGTATATAACGGATATTTTTATCTTTGCCGCTCATACATAGTATATGCCTTAAGTAAAGATAAAACTGTAAATTGATTCGTTGCGGAAGAAAAATCCAAAAGCGAAAATGAGGATCGCAGCCCAGTTCCAGATTTTAGGCCCAATTTTACAAAGCCCATAATCCGAAAAATCCAGTTACAAAGCCCATCCGAAAATCGTTCCATTGATTTCTCTTTTCATTCAGTTCACGGATTTCTTGGAAAGTTCCATGTTAGGGATTAACATCTCCAATGTCAGTTTTCTTCTTCTTTATCCTCTTTGCTTGATCACAACTTTCCAATTTTTTCTTCAGGCTTCCGGTTTTCGTTCTTCGATTCTCTCTCCCGCTTAATCGAATTGGTGGAATTAGAACAACACTGTTTCCTTTTCTTTTGAGTTTTCTTGTTCATTATGATGCGAACCTCCACCAGTAACATTCTCCATCAACTTCATCCCAAACAGCCGCTAGTTAATGGAAATCCTGGGAGTTCGTATTCTTGTTACTGGAGAGGCTCAATTGCTCAAACATTCGGAGTCTTAAGATCTCGCCGAAGATGCTCTCAATTGGCTACTGTTGCTGCCATTGTTGAGGAATTTCACAAATTAGAGAGTGAAAGAGAGAAGCCAAGGTTTCGATGGGTCGAGGTGGGCTCTGATATTACTGAAATGCAGAAGAAAGCTATATCTCAGCTTCCTGCTAAGATGACTAAAAGATGTAAGGCTCTGATGAAACAACTTATATGTTTTTCGCCTCAGAAGGGTAATTTATCAGATATGTTGGCGGCTTGGGTGAGGATTATGAAGCCTGAAAGAGCAGATTGGCTTTCAGTTCTTAAGCATATGAGGATCTCGAATCATCCTCTTTACATCGAGGTATGTAAAATCTCATATAATTTCATAAATTTACTGAATAACAAGCTTAGTCTATCAACATTAAGTTTGTCTGTTTATTCTTCAAAGTTTGTGTGTCTAATAGATTTCATTTTTTCTATTTTGTAATTAATAAATCCATCTACTAAAATAAATTCGAGTTTCAACACTAAACTTTCAATTTTATACGGATTTTAGAAACTTTAAAGCTCTAGATTAAATTTGTAATTTCGATTATTTAGAGACTAAGTAATCACATTGCTGACTTTTTTCTTTTTTTTTTTGTTGATCTTATGTTAGATACGACCGAGTCTGCCAGCCTGGTTAGCATATTTGTTTAATTTCTCATTGTTAAGATTCTCCCGTTCCTTGAGTTCGACAGAGCCATTTATGTCAAGGATGCTTAAGAACGATTTTAAAATATAGGACATGGGTAGAAATGGATTCAATCTAGATTCAATCTAGGATGGTCACTTAGCTAAGATTTAATATCCTACGTGTTTTCTTACCACAAAAATATTATAAGATCAGGTGGGATATCTAAATGGACGCCAATTGGCCCAAATACTCACAGATTAAAAAATTAATAATTATTATTTTGTACTTTATCTAAAAAAAACTTGGGTTGAAATCAAAGGAAACTTCTTATGCATATCATATGAATTTATGACAATCAAATATTATAAGGTCAAACAATTAAAATAGTTGCATGGACTCGGATCCTGTATTTGAAAATTATATGATTTTCAATTACTGTAGAAGTTTTCAAAATTTCACTTTAAATTGTATGATGTAGTTGCAACTATCATTTAGATTCTTGGTTATGTTTAAGAGAAGTATCATTTTGCATATTCAAAGTTGATACGTAAAAGTTCCTATTTATTAAGGCTTCGTTTGATAATTTTTTTTTTTTTTTTAAAACTAAGCTTATAAACATTATTTTCACCCAAGTTTTAAATCTACATTATTTTATCTACTTTATAATCATGTTTTCACAAGTCATACGAAAATTTGAAAAAAAGAAAAAAAAAAACATAGTTATTTTTGTTTTTGAGTTATGCTAAGAATCCAAATACTTCCTTTAAGAAAAAAGATGAAAACCATTGTTAAGAAATTGTGAGAAAATAGACATAATTTTCAAAAACCAAATGGTTATCAAACGGAACCTAATCAATTGGTGATATCTCGTAGCCTAAGTTGATGAGTGTTGTTGCTCTTAGGTGGCAGAAGCTGCTCTTGTAGAGATAACATTTGAGGCCAATACTCGAGACTACACAAAGATTATTCATTACCATGGGAAGCGAAACCAACTCGAGGATGCTGAAAAAATTCTCTTAAGGATGAGAGAAAGGGGTTTTGCTTGTGATCAGATAACATTGACCACAATGATCCACATATATAGCAAGGCTGACAAACTTAATCTTGCCAAACGAACTTTTGAAGAGCTCAAACTGCTCGAGCAACCATTGGATAAAAGATCGTACGGTGCAATGATTATGGCATATGTCAGGGCCGGGATGCCCGAGGAAGGAGAAAATATTCTGAAAGAAATGGATGCGAAAGATATTAATGCAGGAAGTGAAGTTTACAAGGCTTTGTTAAGAGCATATTCCATGGCTGGCAATGCTGAAGGAGCCCAAAGGGTATTCGATGCAATTCAATTGGCTGCTATTCCTCCTGATGAAAAGTTATGTGGTCTGCTGATCAATGCGTATCTGATGGCCGGTCAAAGCCAAAAGGCGCAAATTGCTTTCGACAATATGAGGAGGGCAGGTATTGAACCTAGTGACAAATGCATAGCTTTGGTATTAAGTGCATATGAAAAGGAAAACAGGCTAAACGCAGCATTGGAACTTCTAATAGATTTAGAGAAGGATAACCTCATGGTTGGGAAGGAAGCTTCAGAAATATTAGCAGCTTGGCTTAAAAGACTTGGGGTGGTAGAAGAGGTTGAACTTGTCTTGAGGGAATACACTGTGAAAGAAGCAAGCGGATAAGGTACGAACACACGTCCTTGTTTGCAAAAGTTCTCTTTTCCTATTGAATTGATGTGTAAAAGAACACAAATTTTCTGCTTCATTTCTGTTTTCAAGGGTAGTGGTTGTATAATTTTCAAACAGAAAAAGTGACCCCCCAAACACAAACACACACACACACACAAGAAAAGAGTTTCACAAGCCTGTTATTGAAACGTTGATGTTGATCAAAACATGATACAAGTAAGCTGAAGTTTAATTTATTGATCAGCAGGAGAAACCCTGAGATTAGTAGTTCAATCACCCGTTAGGCTCCTTTAGGGACGCACGGAAATAGCGAGGCACCAATGTGTCGCATTGAGGCCAGTTGTTTTTGGACGATTTGTTGATCAATGCTGCTCATGGATGGGAAACTGTTGCTTCCAATTTGGGACAATTCCAAGGGAGATTGCAACTTCGGCCGTGAAGCTTGCTCGATGGGATCGAGAAGTCGAGAAAGATCTGATTCAGCAGGAAAAGAAGGGCAATCTGATGGAAGGTTTACAATTGAGGATAGAGTTGGCTTCTTGACTAGAGCTGGTGGCTGTGCCTGTAGATTGGGTGCGGGTCTTGGAAGCTCAGATGTTGCTAGGTGCGCTTGCAAATACGAGATCTCTACTTGCAACCTTGCAGCCTAAAAATTAATGTATATCACTCAAATTTTGGCATTTATATATTGATATACAAATTATATGTGAAACTAAAATTGAAAACTAAATAATGTATACAAGTCTGTTTCGCATATGAAGATGTATGATGATGTATGATGATGATCACAAGTCTCAAATGGATATTATAGAAGTAATTGAGGGCTCCATTTGAT

mRNA sequence

ATGGATAGACTACCGGTGGAGTGCATCTGTTGCATTTTGGCCTTCACGTCGCCGAAAGATGTTTGCAAAATCGCCGGAGTCTCAACGGCGTTCAGATCCGCCGCCGATTCCGACCTTCTCTGGAGGACTTTTCTGCCGCCGGATTACCGGCAGATTATTGCTCAGTCGTCGTCCTCGCCTTTGTTTTGGTTTCTAAATTCCTTGCCGGAGAAGGCTCTCTATTTCCATCTCTCCGATCATCCACTTCTTATAGGCACTGGAAATTCGAGTATTACATTGGAAAAAGATAGTGGAAGTAAATGTTATATGATTGGTTCAAGGGACATAGATGCTACAATGAGACAACCATATTGGACCTGGAAATTTGTCCTCCAATCAAGTAACATTCTCCATCAACTTCATCCCAAACAGCCGCTAGTTAATGGAAATCCTGGGAGTTCGTATTCTTGTTACTGGAGAGGCTCAATTGCTCAAACATTCGGAGTCTTAAGATCTCGCCGAAGATGCTCTCAATTGGCTACTGTTGCTGCCATTGTTGAGGAATTTCACAAATTAGAGAGTGAAAGAGAGAAGCCAAGGTTTCGATGGGTCGAGGTGGGCTCTGATATTACTGAAATGCAGAAGAAAGCTATATCTCAGCTTCCTGCTAAGATGACTAAAAGATGTAAGGCTCTGATGAAACAACTTATATGTTTTTCGCCTCAGAAGGGTAATTTATCAGATATGTTGGCGGCTTGGGTGAGGATTATGAAGCCTGAAAGAGCAGATTGGCTTTCAGTTCTTAAGCATATGAGGATCTCGAATCATCCTCTTTACATCGAGGTGGCAGAAGCTGCTCTTGTAGAGATAACATTTGAGGCCAATACTCGAGACTACACAAAGATTATTCATTACCATGGGAAGCGAAACCAACTCGAGGATGCTGAAAAAATTCTCTTAAGGATGAGAGAAAGGGGTTTTGCTTGTGATCAGATAACATTGACCACAATGATCCACATATATAGCAAGGCTGACAAACTTAATCTTGCCAAACGAACTTTTGAAGAGCTCAAACTGCTCGAGCAACCATTGGATAAAAGATCGTACGGTGCAATGATTATGGCATATGTCAGGGCCGGGATGCCCGAGGAAGGAGAAAATATTCTGAAAGAAATGGATGCGAAAGATATTAATGCAGGAAGTGAAGTTTACAAGGCTTTGTTAAGAGCATATTCCATGGCTGGCAATGCTGAAGGAGCCCAAAGGGTATTCGATGCAATTCAATTGGCTGCTATTCCTCCTGATGAAAAGTTATGTGGTCTGCTGATCAATGCGTATCTGATGGCCGGTCAAAGCCAAAAGGCGCAAATTGCTTTCGACAATATGAGGAGGGCAGGTATTGAACCTAGTGACAAATGCATAGCTTTGGTATTAAGTGCATATGAAAAGGAAAACAGGCTAAACGCAGCATTGGAACTTCTAATAGATTTAGAGAAGGATAACCTCATGGTTGGGAAGGAAGCTTCAGAAATATTAGCAGCTTGGCTTAAAAGACTTGGGGTGGTAGAAGAGGTTGAACTTGTCTTGAGGGAATACACTGTGAAAGAAGCAAGCGGATAAGCAGGAGAAACCCTGAGATTAGTAGTTCAATCACCCGTTAGGCTCCTTTAGGGACGCACGGAAATAGCGAGGCACCAATGTGTCGCATTGAGGCCAGTTGTTTTTGGACGATTTGTTGATCAATGCTGCTCATGGATGGGAAACTGTTGCTTCCAATTTGGGACAATTCCAAGGGAGATTGCAACTTCGGCCGTGAAGCTTGCTCGATGGGATCGAGAAGTCGAGAAAGATCTGATTCAGCAGGAAAAGAAGGGCAATCTGATGGAAGGTTTACAATTGAGGATAGAGTTGGCTTCTTGACTAGAGCTGGTGGCTGTGCCTGTAGATTGGGTGCGGGTCTTGGAAGCTCAGATGTTGCTAGGTGCGCTTGCAAATACGAGATCTCTACTTGCAACCTTGCAGCCTAAAAATTAATGTATATCACTCAAATTTTGGCATTTATATATTGATATACAAATTATATGTGAAACTAAAATTGAAAACTAAATAATGTATACAAGTCTGTTTCGCATATGAAGATGTATGATGATGTATGATGATGATCACAAGTCTCAAATGGATATTATAGAAGTAATTGAGGGCTCCATTTGAT

Coding sequence (CDS)

ATGGATAGACTACCGGTGGAGTGCATCTGTTGCATTTTGGCCTTCACGTCGCCGAAAGATGTTTGCAAAATCGCCGGAGTCTCAACGGCGTTCAGATCCGCCGCCGATTCCGACCTTCTCTGGAGGACTTTTCTGCCGCCGGATTACCGGCAGATTATTGCTCAGTCGTCGTCCTCGCCTTTGTTTTGGTTTCTAAATTCCTTGCCGGAGAAGGCTCTCTATTTCCATCTCTCCGATCATCCACTTCTTATAGGCACTGGAAATTCGAGTATTACATTGGAAAAAGATAGTGGAAGTAAATGTTATATGATTGGTTCAAGGGACATAGATGCTACAATGAGACAACCATATTGGACCTGGAAATTTGTCCTCCAATCAAGTAACATTCTCCATCAACTTCATCCCAAACAGCCGCTAGTTAATGGAAATCCTGGGAGTTCGTATTCTTGTTACTGGAGAGGCTCAATTGCTCAAACATTCGGAGTCTTAAGATCTCGCCGAAGATGCTCTCAATTGGCTACTGTTGCTGCCATTGTTGAGGAATTTCACAAATTAGAGAGTGAAAGAGAGAAGCCAAGGTTTCGATGGGTCGAGGTGGGCTCTGATATTACTGAAATGCAGAAGAAAGCTATATCTCAGCTTCCTGCTAAGATGACTAAAAGATGTAAGGCTCTGATGAAACAACTTATATGTTTTTCGCCTCAGAAGGGTAATTTATCAGATATGTTGGCGGCTTGGGTGAGGATTATGAAGCCTGAAAGAGCAGATTGGCTTTCAGTTCTTAAGCATATGAGGATCTCGAATCATCCTCTTTACATCGAGGTGGCAGAAGCTGCTCTTGTAGAGATAACATTTGAGGCCAATACTCGAGACTACACAAAGATTATTCATTACCATGGGAAGCGAAACCAACTCGAGGATGCTGAAAAAATTCTCTTAAGGATGAGAGAAAGGGGTTTTGCTTGTGATCAGATAACATTGACCACAATGATCCACATATATAGCAAGGCTGACAAACTTAATCTTGCCAAACGAACTTTTGAAGAGCTCAAACTGCTCGAGCAACCATTGGATAAAAGATCGTACGGTGCAATGATTATGGCATATGTCAGGGCCGGGATGCCCGAGGAAGGAGAAAATATTCTGAAAGAAATGGATGCGAAAGATATTAATGCAGGAAGTGAAGTTTACAAGGCTTTGTTAAGAGCATATTCCATGGCTGGCAATGCTGAAGGAGCCCAAAGGGTATTCGATGCAATTCAATTGGCTGCTATTCCTCCTGATGAAAAGTTATGTGGTCTGCTGATCAATGCGTATCTGATGGCCGGTCAAAGCCAAAAGGCGCAAATTGCTTTCGACAATATGAGGAGGGCAGGTATTGAACCTAGTGACAAATGCATAGCTTTGGTATTAAGTGCATATGAAAAGGAAAACAGGCTAAACGCAGCATTGGAACTTCTAATAGATTTAGAGAAGGATAACCTCATGGTTGGGAAGGAAGCTTCAGAAATATTAGCAGCTTGGCTTAAAAGACTTGGGGTGGTAGAAGAGGTTGAACTTGTCTTGAGGGAATACACTGTGAAAGAAGCAAGCGGATAA

Protein sequence

MDRLPVECICCILAFTSPKDVCKIAGVSTAFRSAADSDLLWRTFLPPDYRQIIAQSSSSPLFWFLNSLPEKALYFHLSDHPLLIGTGNSSITLEKDSGSKCYMIGSRDIDATMRQPYWTWKFVLQSSNILHQLHPKQPLVNGNPGSSYSCYWRGSIAQTFGVLRSRRRCSQLATVAAIVEEFHKLESEREKPRFRWVEVGSDITEMQKKAISQLPAKMTKRCKALMKQLICFSPQKGNLSDMLAAWVRIMKPERADWLSVLKHMRISNHPLYIEVAEAALVEITFEANTRDYTKIIHYHGKRNQLEDAEKILLRMRERGFACDQITLTTMIHIYSKADKLNLAKRTFEELKLLEQPLDKRSYGAMIMAYVRAGMPEEGENILKEMDAKDINAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGIEPSDKCIALVLSAYEKENRLNAALELLIDLEKDNLMVGKEASEILAAWLKRLGVVEEVELVLREYTVKEASG

Homology

[Close]

BLAST of CmUC05G082730 vs. NCBI nr
Match: XP_038903030.1 (pentatricopeptide repeat-containing protein At1g01970 [Benincasa hispida] >XP_038903038.1 pentatricopeptide repeat-containing protein At1g01970 [Benincasa hispida])

HSP 1 Score: 717.6 bits (1851), Expect = 7.8e-203
Identity = 365/409 (89.24%), Postives = 387/409 (94.62%), Query Frame = 0


Query: 124 LQSSNILHQLHPKQPLVNGNPGSSYSCYWRGSIAQTFGVLRSRRRCSQLATVAAIVEEFH 183
           + +S+I +QLHPKQPLVNG P SSY+ YWRGSI QT  VL SRRRCS+LATVAAIVEE H
Sbjct: 4   ISTSSIFYQLHPKQPLVNGTPRSSYTRYWRGSIEQTLSVLSSRRRCSRLATVAAIVEEVH 63

Query: 184 KLESEREKPRFRWVEVGSDITEMQKKAISQLPAKMTKRCKALMKQLICFSPQKGNLSDML 243
           KLE+EREKPRFRWVEVGSDITE+QK+AISQLP KMTKRCKALMKQ+ICFSPQKG+LSDML
Sbjct: 64  KLENEREKPRFRWVEVGSDITEIQKQAISQLPPKMTKRCKALMKQIICFSPQKGSLSDML 123

Query: 244 AAWVRIMKPERADWLSVLKHMRISNHPLYIEVAEAALVEITFEANTRDYTKIIHYHGKRN 303
            AWVRIMKPERADWLSVLKH+RISNHPLYIEVAEAALVEITFEANTRDYTKIIH++GKRN
Sbjct: 124 TAWVRIMKPERADWLSVLKHLRISNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGKRN 183

Query: 304 QLEDAEKILLRMRERGFACDQITLTTMIHIYSKADKLNLAKRTFEELKLLEQPLDKRSYG 363
           QLEDAEK+LL MRERG ACDQITLTTMIHIYSKAD+LNLAK+TFEELKLLE+ LD+RSYG
Sbjct: 184 QLEDAEKVLLSMRERGLACDQITLTTMIHIYSKADRLNLAKQTFEELKLLEKSLDRRSYG 243

Query: 364 AMIMAYVRAGMPEEGENILKEMDAKDINAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLA 423
           AMIMAYVRAGMPEEGENILKEMDAK I AGSEVYKALLRAYSMAGNAEGAQRVFDAIQLA
Sbjct: 244 AMIMAYVRAGMPEEGENILKEMDAKQIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLA 303

Query: 424 AIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGIEPSDKCIALVLSAYEKENRLNAA 483
            IPPDEKLCGLLINAYLMAG+S+KAQIAFDNMRRAGIEPSDKCIALVLSAYE ENRLNAA
Sbjct: 304 VIPPDEKLCGLLINAYLMAGESRKAQIAFDNMRRAGIEPSDKCIALVLSAYETENRLNAA 363

Query: 484 LELLIDLEKDNLMVGKEASEILAAWLKRLGVVEEVELVLREYTVKEASG 533
           LELLIDLEKDNL+V KEASEILAAWLKRLGVVEEVELVLREYT KE SG
Sbjct: 364 LELLIDLEKDNLVVRKEASEILAAWLKRLGVVEEVELVLREYTAKEVSG 412

[Close]

BLAST of CmUC05G082730 vs. NCBI nr
Match: XP_023526280.1 (pentatricopeptide repeat-containing protein At1g01970 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526281.1 pentatricopeptide repeat-containing protein At1g01970 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 694.5 bits (1791), Expect = 7.1e-196
Identity = 354/405 (87.41%), Postives = 378/405 (93.33%), Query Frame = 0


Query: 128 NILHQLHPKQPLVNGNPGSSYSCYWRGSIAQTFGVLRSRRRCSQLATVAAIVEEFHKLES 187
           NIL+Q+HPKQPLVNG   SSYSCY RG   +   VL  RRRC QLATVAAIVEE H LES
Sbjct: 7   NILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLATVAAIVEEVHTLES 66

Query: 188 EREKPRFRWVEVGSDITEMQKKAISQLPAKMTKRCKALMKQLICFSPQKGNLSDMLAAWV 247
            REKPRFRWVEVGSDITEMQK+AISQLP KMTKRCKA+MKQ+ICFSPQ GNLSDMLAAWV
Sbjct: 67  GREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSDMLAAWV 126

Query: 248 RIMKPERADWLSVLKHMRISNHPLYIEVAEAALVEITFEANTRDYTKIIHYHGKRNQLED 307
           RIMKP+RADWLSVLKH+RI +HPLYIEVAEAALVE TFEA+TRDYTKIIHY+GKRNQLED
Sbjct: 127 RIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGKRNQLED 186

Query: 308 AEKILLRMRERGFACDQITLTTMIHIYSKADKLNLAKRTFEELKLLEQPLDKRSYGAMIM 367
           AE+ILL MRERGFACDQITLTTMIHIYSKAD+L+LAK+TFEELKLLE+PLD+RSY AMIM
Sbjct: 187 AERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRSYDAMIM 246

Query: 368 AYVRAGMPEEGENILKEMDAKDINAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPP 427
           A++RAGMPEEGENILKEMD KDI AGSEVYKALLRAYSMA NA+GAQRVFDAIQLAAIPP
Sbjct: 247 AFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNADGAQRVFDAIQLAAIPP 306

Query: 428 DEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGIEPSDKCIALVLSAYEKENRLNAALELL 487
           D+KLCGLLINAYLMAGQSQKAQIAFDNMRRAG+EPSDKCIALVLSAYEKENRLNAALELL
Sbjct: 307 DDKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL 366

Query: 488 IDLEKDNLMVGKEASEILAAWLKRLGVVEEVELVLREYTVKEASG 533
           IDLEK+ LMVGKEASE+LAAWLKRLGVVEEVELVLREY VKEASG
Sbjct: 367 IDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEASG 411

[Close]

BLAST of CmUC05G082730 vs. NCBI nr
Match: XP_022980308.1 (pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980309.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980310.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980311.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980312.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980313.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima])

HSP 1 Score: 692.2 bits (1785), Expect = 3.5e-195
Identity = 354/405 (87.41%), Postives = 377/405 (93.09%), Query Frame = 0


Query: 128 NILHQLHPKQPLVNGNPGSSYSCYWRGSIAQTFGVLRSRRRCSQLATVAAIVEEFHKLES 187
           NIL+Q+HPKQPLVNG   SSYSCY RG   +   VL  RR C QLATVAAIVEE HKLES
Sbjct: 7   NILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRTCYQLATVAAIVEEVHKLES 66

Query: 188 EREKPRFRWVEVGSDITEMQKKAISQLPAKMTKRCKALMKQLICFSPQKGNLSDMLAAWV 247
            REKPRFRWVEVGSDITEMQK+AISQLP KMTKRCKA+MKQ+ICF PQ G+LSDMLAAWV
Sbjct: 67  GREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFLPQNGHLSDMLAAWV 126

Query: 248 RIMKPERADWLSVLKHMRISNHPLYIEVAEAALVEITFEANTRDYTKIIHYHGKRNQLED 307
           RIMKP+RADWLSVLKH+RI +HPLYIEVAEAALVE TFEA+TRDYTKIIHY+GK+NQLED
Sbjct: 127 RIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGKQNQLED 186

Query: 308 AEKILLRMRERGFACDQITLTTMIHIYSKADKLNLAKRTFEELKLLEQPLDKRSYGAMIM 367
           AE+ILL MRERGFACDQITLTTMIHIYSKAD+LNLAK+TFEELKLLE+PLD+RSY AMIM
Sbjct: 187 AERILLSMRERGFACDQITLTTMIHIYSKADELNLAKQTFEELKLLEEPLDRRSYDAMIM 246

Query: 368 AYVRAGMPEEGENILKEMDAKDINAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPP 427
           A+VRAGMPEEGENILKEMD KDI AGSEVYKALLRAYSMA NAEGAQRVFDAIQLAAIPP
Sbjct: 247 AFVRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQLAAIPP 306

Query: 428 DEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGIEPSDKCIALVLSAYEKENRLNAALELL 487
           D+KLCGLLINAYLMAGQSQKAQIAFDNMRRAG+EPSDKCIALVLSAYEKENRLNAALELL
Sbjct: 307 DDKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL 366

Query: 488 IDLEKDNLMVGKEASEILAAWLKRLGVVEEVELVLREYTVKEASG 533
           IDLEK+ LMVGKEASE+LAAWLKRLGVVEEVELVLREY VKEASG
Sbjct: 367 IDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEASG 411

[Close]

BLAST of CmUC05G082730 vs. NCBI nr
Match: KAG6582566.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018949.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 691.4 bits (1783), Expect = 6.0e-195
Identity = 352/405 (86.91%), Postives = 377/405 (93.09%), Query Frame = 0


Query: 128 NILHQLHPKQPLVNGNPGSSYSCYWRGSIAQTFGVLRSRRRCSQLATVAAIVEEFHKLES 187
           NIL+Q+HPKQPLVNG   SSYSCY RG   +   VL  RRRC QLA VAAIVEE H LES
Sbjct: 7   NILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLAIVAAIVEEVHTLES 66

Query: 188 EREKPRFRWVEVGSDITEMQKKAISQLPAKMTKRCKALMKQLICFSPQKGNLSDMLAAWV 247
            REKPRFRWVEVGSDITEMQK+AISQLP KMTKRCKA+MKQ+ICFSPQ GNLSDMLAAWV
Sbjct: 67  GREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSDMLAAWV 126

Query: 248 RIMKPERADWLSVLKHMRISNHPLYIEVAEAALVEITFEANTRDYTKIIHYHGKRNQLED 307
           RIMKP+RADWLSVLKH+RI +HPLYIEVAEAALVE TFEA+TRDYTKIIHY+GKRNQLED
Sbjct: 127 RIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGKRNQLED 186

Query: 308 AEKILLRMRERGFACDQITLTTMIHIYSKADKLNLAKRTFEELKLLEQPLDKRSYGAMIM 367
           AE+ILL M+ERGFACDQITLTTMIHIYSKAD+LNLAK+TFE++KLLE+PLD+RSY AMIM
Sbjct: 187 AERILLCMKERGFACDQITLTTMIHIYSKADELNLAKQTFEDIKLLEEPLDRRSYDAMIM 246

Query: 368 AYVRAGMPEEGENILKEMDAKDINAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPP 427
           A++RAGMPEEGENILKEMD KDI AGSEVYKALLRAYSMA NAEGAQRVFDAIQLAAIPP
Sbjct: 247 AFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQLAAIPP 306

Query: 428 DEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGIEPSDKCIALVLSAYEKENRLNAALELL 487
           D+KLCGLLINAYLMAGQSQKAQIAFDNMRRAG+EPSDKCIALVLSAYEKENRLNAALELL
Sbjct: 307 DDKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL 366

Query: 488 IDLEKDNLMVGKEASEILAAWLKRLGVVEEVELVLREYTVKEASG 533
           IDLEK+ LMVGKEASE+LAAWLKRLGVVEEVELVLREY VKEASG
Sbjct: 367 IDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEASG 411

[Close]

BLAST of CmUC05G082730 vs. NCBI nr
Match: XP_022924339.1 (pentatricopeptide repeat-containing protein At1g01970 [Cucurbita moschata] >XP_022924340.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita moschata] >XP_022924341.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita moschata])

HSP 1 Score: 689.1 bits (1777), Expect = 3.0e-194
Identity = 351/405 (86.67%), Postives = 376/405 (92.84%), Query Frame = 0


Query: 128 NILHQLHPKQPLVNGNPGSSYSCYWRGSIAQTFGVLRSRRRCSQLATVAAIVEEFHKLES 187
           NIL+Q+HPKQPLVNG   SSYSCY RG   +   VL  RRRC QL  VAAIVEE HKLES
Sbjct: 7   NILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLCAVAAIVEEVHKLES 66

Query: 188 EREKPRFRWVEVGSDITEMQKKAISQLPAKMTKRCKALMKQLICFSPQKGNLSDMLAAWV 247
            REKPRFRW+EVGSDITEMQK+AISQLP KMTKRCKA+MKQ+ICFSPQ GNLSDMLAAWV
Sbjct: 67  GREKPRFRWLEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSDMLAAWV 126

Query: 248 RIMKPERADWLSVLKHMRISNHPLYIEVAEAALVEITFEANTRDYTKIIHYHGKRNQLED 307
           RIMKP+RADWLSVLKH+RI +HPLYIEVAEAALVE TFEA+TRDYTKIIHY+GKRNQLED
Sbjct: 127 RIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGKRNQLED 186

Query: 308 AEKILLRMRERGFACDQITLTTMIHIYSKADKLNLAKRTFEELKLLEQPLDKRSYGAMIM 367
           AE+ILL MRERGFACDQITLTTMIHIYSKAD+L+LAK+TFEELKLLE+PLD+RSY AMIM
Sbjct: 187 AERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRSYDAMIM 246

Query: 368 AYVRAGMPEEGENILKEMDAKDINAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPP 427
           A++RAGMPEEGENILKEMD KDI AGSEVYKALLRAYSMA NAEGAQRVFDAIQLAAIPP
Sbjct: 247 AFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQLAAIPP 306

Query: 428 DEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGIEPSDKCIALVLSAYEKENRLNAALELL 487
           D+KLCGLLINAYLMA QSQKAQIAFDNMRRAG+EPSDKCIALVLSAYEKENRLNAALELL
Sbjct: 307 DDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL 366

Query: 488 IDLEKDNLMVGKEASEILAAWLKRLGVVEEVELVLREYTVKEASG 533
           IDLEK+ L+VGKEASE+LAAWLKRLGVVEEVELVLREY VKEASG
Sbjct: 367 IDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEASG 411

[Close]

BLAST of CmUC05G082730 vs. ExPASy Swiss-Prot
Match: Q9LPC4 (Pentatricopeptide repeat-containing protein At1g01970 OS=Arabidopsis thaliana OX=3702 GN=At1g01970 PE=2 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 5.8e-124
Identity = 216/364 (59.34%), Postives = 291/364 (79.95%), Query Frame = 0


Query: 167 RRCSQLATVAAIVEEFHKLESEREKPRFRWVEVGSDITEMQKKAISQLPAKMTKRCKALM 226
           R CS     +  + E  + E   +   F W +VG ++TE Q +AI+++P KM+KRC+ALM
Sbjct: 43  RLCSCKCNASLAIGEVVEKEDAEQSRSFNWADVGLNLTEEQDEAITRIPIKMSKRCQALM 102

Query: 227 KQLICFSPQKGNLSDMLAAWVRIMKPERADWLSVLKHMRISNHPLYIEVAEAALVEITFE 286
           +Q+ICFSP+KG+  D+L AW+R M P RADWLS+LK ++  + P YI+VAE +L++ +FE
Sbjct: 103 RQIICFSPEKGSFCDLLGAWLRRMNPIRADWLSILKELKNLDSPFYIKVAEFSLLQDSFE 162

Query: 287 ANTRDYTKIIHYHGKRNQLEDAEKILLRMRERGFACDQITLTTMIHIYSKADKLNLAKRT 346
           AN RDYTKIIHY+GK NQ+EDAE+ LL M+ RGF  DQ+TLT M+ +YSKA    LA+ T
Sbjct: 163 ANARDYTKIIHYYGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSKAGCHKLAEET 222

Query: 347 FEELKLLEQPLDKRSYGAMIMAYVRAGMPEEGENILKEMDAKDINAGSEVYKALLRAYSM 406
           F E+KLL +PLD RSYG+MIMAY+RAG+PE+GE++L+EMD+++I AG EVYKALLR YSM
Sbjct: 223 FNEIKLLGEPLDYRSYGSMIMAYIRAGVPEKGESLLREMDSQEICAGREVYKALLRDYSM 282

Query: 407 AGNAEGAQRVFDAIQLAAIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGIEPSDKC 466
            G+AEGA+RVFDA+Q+A I PD KLCGLLINAY ++GQSQ A++AF+NMR+AGI+ +DKC
Sbjct: 283 GGDAEGAKRVFDAVQIAGITPDVKLCGLLINAYSVSGQSQNARLAFENMRKAGIKATDKC 342

Query: 467 IALVLSAYEKENRLNAALELLIDLEKDNLMVGKEASEILAAWLKRLGVVEEVELVLREYT 526
           +ALVL+AYEKE +LN AL  L++LEKD++M+GKEAS +LA W K+LGVVEEVEL+LRE++
Sbjct: 343 VALVLAAYEKEEKLNEALGFLVELEKDSIMLGKEASAVLAQWFKKLGVVEEVELLLREFS 402

Query: 527 VKEA 531
             ++
Sbjct: 403 SSQS 406

[Close]

BLAST of CmUC05G082730 vs. ExPASy Swiss-Prot
Match: Q940Z1 (Pentatricopeptide repeat-containing protein At1g19525 OS=Arabidopsis thaliana OX=3702 GN=At1g19525 PE=2 SV=2)

HSP 1 Score: 162.9 bits (411), Expect = 9.8e-39
Identity = 89/209 (42.58%), Postives = 126/209 (60.29%), Query Frame = 0


Query: 315 MRERGFACDQITLTTMIHIYSKADKLNLAKRTFEELKLLEQPLDKRSYGAMIMAYVRAGM 374
           M + G   D +T T ++H+YSK+     A   FE LK      D++ Y AMI+ YV AG 
Sbjct: 1   MSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGK 60

Query: 375 PEEGENILKEMDAKDINAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPP-DEKLCG 434
           P+ GE ++KEM AK++ A  EVY ALLRAY+  G+A GA  +  ++Q A+  P   +   
Sbjct: 61  PKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYS 120

Query: 435 LLINAYLMAGQSQKAQIAFDNMRRAGIEPSDKCIALVLSAYEKENRLNAALELLIDLEKD 494
           L + AY  AGQ  KA+  FD MR+ G +P DKCIA ++ AY+ EN L+ AL LL+ LEKD
Sbjct: 121 LFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKD 180

Query: 495 NLMVGKEASEILAAWLKRLGVVEEVELVL 523
            + +G     +L  W+  LG++EE E +L
Sbjct: 181 GIEIGVITYTVLVDWMANLGLIEEAEQLL 209

[Close]

BLAST of CmUC05G082730 vs. ExPASy Swiss-Prot
Match: Q6NPT8 (F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 6.6e-19
Identity = 47/127 (37.01%), Postives = 73/127 (57.48%), Query Frame = 0


Query: 2   DRLPVECICCILAFTSPKDVCKIAGVSTAFRSAADSDLLWRTFLPPDYRQIIAQSSSSPL 61
           D LP +CI  +++ TSP+D C +A VS + +SAA SDL+W  FLP +Y  ++ QS+    
Sbjct: 33  DALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQSA---- 92

Query: 62  FWFLNSLPEKALYFHLSDHPLLIGTGNSSITLEKDSGSKCYMIGSRDIDATM--RQPYWT 121
               N L +K ++  L+D+ +L+  G  S  +EK SG KCYM+ + ++         YW 
Sbjct: 93  ----NHLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYWK 151

Query: 122 WKFVLQS 127
           W  V +S
Sbjct: 153 WITVPES 151

[Close]

BLAST of CmUC05G082730 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.1e-18
Identity = 57/161 (35.40%), Postives = 83/161 (51.55%), Query Frame = 0


Query: 2   DRLPVECICCILAFTSPKDVCKIAGVSTAFRSAADSDLLWRTFLPPDYRQIIAQSSSSPL 61
           D LP +CI  I++FTSP+D C  A VS  F SA  SD +W  FLPP+Y  ++++S     
Sbjct: 62  DVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSRV--- 121

Query: 62  FWFLNSLPEKALYFHLSDHPLLIGTGNSSITLEKDSGSKCYMIGSRDIDAT--MRQPYWT 121
                   +K LYF L  +P+LI  G  S  LEK SG +C M+ S+++  T      YW 
Sbjct: 122 -----FASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQ 181

Query: 122 WKFVLQS-----SNIL----HQLHPKQPLVNGNPGSSYSCY 152
           W  + +S     + +L     ++  K      +PG+ YS Y
Sbjct: 182 WISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAY 214

[Close]

BLAST of CmUC05G082730 vs. ExPASy Swiss-Prot
Match: Q9ZVQ8 (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.1e-18
Identity = 47/123 (38.21%), Postives = 74/123 (60.16%), Query Frame = 0


Query: 1   MDRLPVECICCILAFTSPKDVCKIAGVSTAFRSAADSDLLWRTFLPPDYRQIIAQSSSSP 60
           +D LP EC+  I++FTSP+D C +A VS  F SA  SD++W  F+PP+Y  +I+QS +  
Sbjct: 36  LDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSRA-- 95

Query: 61  LFWFLNSLPEKALYFHLSDHPLLIGTGNSSITLEKDSGSKCYMIGSRDIDATMRQPYWTW 120
            F FL+   +K LYF L D  +LI  G  S+ +EK +  +C MI + ++         +W
Sbjct: 96  -FKFLS---KKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSW 152

Query: 121 KFV 124
           +++
Sbjct: 156 RWI 152

[Close]

BLAST of CmUC05G082730 vs. ExPASy TrEMBL
Match: A0A6J1IR15 (pentatricopeptide repeat-containing protein At1g01970 OS=Cucurbita maxima OX=3661 GN=LOC111479721 PE=4 SV=1)

HSP 1 Score: 692.2 bits (1785), Expect = 1.7e-195
Identity = 354/405 (87.41%), Postives = 377/405 (93.09%), Query Frame = 0


Query: 128 NILHQLHPKQPLVNGNPGSSYSCYWRGSIAQTFGVLRSRRRCSQLATVAAIVEEFHKLES 187
           NIL+Q+HPKQPLVNG   SSYSCY RG   +   VL  RR C QLATVAAIVEE HKLES
Sbjct: 7   NILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRTCYQLATVAAIVEEVHKLES 66

Query: 188 EREKPRFRWVEVGSDITEMQKKAISQLPAKMTKRCKALMKQLICFSPQKGNLSDMLAAWV 247
            REKPRFRWVEVGSDITEMQK+AISQLP KMTKRCKA+MKQ+ICF PQ G+LSDMLAAWV
Sbjct: 67  GREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFLPQNGHLSDMLAAWV 126

Query: 248 RIMKPERADWLSVLKHMRISNHPLYIEVAEAALVEITFEANTRDYTKIIHYHGKRNQLED 307
           RIMKP+RADWLSVLKH+RI +HPLYIEVAEAALVE TFEA+TRDYTKIIHY+GK+NQLED
Sbjct: 127 RIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGKQNQLED 186

Query: 308 AEKILLRMRERGFACDQITLTTMIHIYSKADKLNLAKRTFEELKLLEQPLDKRSYGAMIM 367
           AE+ILL MRERGFACDQITLTTMIHIYSKAD+LNLAK+TFEELKLLE+PLD+RSY AMIM
Sbjct: 187 AERILLSMRERGFACDQITLTTMIHIYSKADELNLAKQTFEELKLLEEPLDRRSYDAMIM 246

Query: 368 AYVRAGMPEEGENILKEMDAKDINAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPP 427
           A+VRAGMPEEGENILKEMD KDI AGSEVYKALLRAYSMA NAEGAQRVFDAIQLAAIPP
Sbjct: 247 AFVRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQLAAIPP 306

Query: 428 DEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGIEPSDKCIALVLSAYEKENRLNAALELL 487
           D+KLCGLLINAYLMAGQSQKAQIAFDNMRRAG+EPSDKCIALVLSAYEKENRLNAALELL
Sbjct: 307 DDKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL 366

Query: 488 IDLEKDNLMVGKEASEILAAWLKRLGVVEEVELVLREYTVKEASG 533
           IDLEK+ LMVGKEASE+LAAWLKRLGVVEEVELVLREY VKEASG
Sbjct: 367 IDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEASG 411

[Close]

BLAST of CmUC05G082730 vs. ExPASy TrEMBL
Match: A0A6J1EER0 (pentatricopeptide repeat-containing protein At1g01970 OS=Cucurbita moschata OX=3662 GN=LOC111431862 PE=4 SV=1)

HSP 1 Score: 689.1 bits (1777), Expect = 1.4e-194
Identity = 351/405 (86.67%), Postives = 376/405 (92.84%), Query Frame = 0


Query: 128 NILHQLHPKQPLVNGNPGSSYSCYWRGSIAQTFGVLRSRRRCSQLATVAAIVEEFHKLES 187
           NIL+Q+HPKQPLVNG   SSYSCY RG   +   VL  RRRC QL  VAAIVEE HKLES
Sbjct: 7   NILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLCAVAAIVEEVHKLES 66

Query: 188 EREKPRFRWVEVGSDITEMQKKAISQLPAKMTKRCKALMKQLICFSPQKGNLSDMLAAWV 247
            REKPRFRW+EVGSDITEMQK+AISQLP KMTKRCKA+MKQ+ICFSPQ GNLSDMLAAWV
Sbjct: 67  GREKPRFRWLEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSDMLAAWV 126

Query: 248 RIMKPERADWLSVLKHMRISNHPLYIEVAEAALVEITFEANTRDYTKIIHYHGKRNQLED 307
           RIMKP+RADWLSVLKH+RI +HPLYIEVAEAALVE TFEA+TRDYTKIIHY+GKRNQLED
Sbjct: 127 RIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGKRNQLED 186

Query: 308 AEKILLRMRERGFACDQITLTTMIHIYSKADKLNLAKRTFEELKLLEQPLDKRSYGAMIM 367
           AE+ILL MRERGFACDQITLTTMIHIYSKAD+L+LAK+TFEELKLLE+PLD+RSY AMIM
Sbjct: 187 AERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRSYDAMIM 246

Query: 368 AYVRAGMPEEGENILKEMDAKDINAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPP 427
           A++RAGMPEEGENILKEMD KDI AGSEVYKALLRAYSMA NAEGAQRVFDAIQLAAIPP
Sbjct: 247 AFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQLAAIPP 306

Query: 428 DEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGIEPSDKCIALVLSAYEKENRLNAALELL 487
           D+KLCGLLINAYLMA QSQKAQIAFDNMRRAG+EPSDKCIALVLSAYEKENRLNAALELL
Sbjct: 307 DDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL 366

Query: 488 IDLEKDNLMVGKEASEILAAWLKRLGVVEEVELVLREYTVKEASG 533
           IDLEK+ L+VGKEASE+LAAWLKRLGVVEEVELVLREY VKEASG
Sbjct: 367 IDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEASG 411

[Close]

BLAST of CmUC05G082730 vs. ExPASy TrEMBL
Match: A0A5D3D032 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004020 PE=4 SV=1)

HSP 1 Score: 679.9 bits (1753), Expect = 8.8e-192
Identity = 350/408 (85.78%), Postives = 377/408 (92.40%), Query Frame = 0


Query: 124 LQSSNILHQLHPKQPLVNGNPGSSYSCYWRGSIAQTFGVLRSRRRCSQLATVAAIVEEFH 183
           + +SNIL+QLH   PLVNG   +S S YW+ SI     VL SRRRCSQ+ATV AIV+E H
Sbjct: 3   ISTSNILYQLH--LPLVNGTSNTSSSRYWKDSI-----VLNSRRRCSQMATVTAIVDELH 62

Query: 184 KLESEREKPRFRWVEVGSDITEMQKKAISQLPAKMTKRCKALMKQLICFSPQKGNLSDML 243
           KLESEREKPRFRWVEVG +ITE QK+AISQLP KMTK+CKA+MKQ+ICFSPQKG LSDML
Sbjct: 63  KLESEREKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDML 122

Query: 244 AAWVRIMKPERADWLSVLKHMRISNHPLYIEVAEAALVEITFEANTRDYTKIIHYHGKRN 303
           AAWVRIMKPERADWLSVLKH+RI NHPLYI+VAEAALVEITFEANTRDYTKIIH++GK+N
Sbjct: 123 AAWVRIMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQN 182

Query: 304 QLEDAEKILLRMRERGFACDQITLTTMIHIYSKADKLNLAKRTFEELKLLEQPLDKRSYG 363
           QLEDAEK+LL MRERGFACDQITLTTMIHIYSKADKL LAK+TFEELKLLEQ LDKRSYG
Sbjct: 183 QLEDAEKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYG 242

Query: 364 AMIMAYVRAGMPEEGENILKEMDAKDINAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLA 423
           AMIMAYVRAG+PEEGE ILKEMDAKDI AGSEVYKALLRAYSMAG+AEGAQRVFDAIQLA
Sbjct: 243 AMIMAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLA 302

Query: 424 AIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGIEPSDKCIALVLSAYEKENRLNAA 483
           AIPPDEKLCGLL+NAYLMAGQS+KAQIAFDNMRRAGIEPSDKCIAL LSAYEKENRLNAA
Sbjct: 303 AIPPDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAA 362

Query: 484 LELLIDLEKDNLMVGKEASEILAAWLKRLGVVEEVELVLREYTVKEAS 532
           LELLIDLEKDN+MVGKEAS+ILAAWLKRLGVVEE+E+VLREYT KE S
Sbjct: 363 LELLIDLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVS 403

[Close]

BLAST of CmUC05G082730 vs. ExPASy TrEMBL
Match: A0A1S3AWA7 (pentatricopeptide repeat-containing protein At1g01970 OS=Cucumis melo OX=3656 GN=LOC103483346 PE=4 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 2.0e-191
Identity = 349/408 (85.54%), Postives = 377/408 (92.40%), Query Frame = 0


Query: 124 LQSSNILHQLHPKQPLVNGNPGSSYSCYWRGSIAQTFGVLRSRRRCSQLATVAAIVEEFH 183
           + +SNIL+QLH   PLVNG   +S S YW+ SI     VL SRRRCSQ+ATV AIV+E H
Sbjct: 3   ISTSNILYQLH--LPLVNGTSNTSSSRYWKDSI-----VLNSRRRCSQMATVTAIVDELH 62

Query: 184 KLESEREKPRFRWVEVGSDITEMQKKAISQLPAKMTKRCKALMKQLICFSPQKGNLSDML 243
           KLESEREKPRFRWVEVG +ITE QK+AISQLP KMTK+CKA+MKQ+ICFSPQKG LSDML
Sbjct: 63  KLESEREKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDML 122

Query: 244 AAWVRIMKPERADWLSVLKHMRISNHPLYIEVAEAALVEITFEANTRDYTKIIHYHGKRN 303
           AAWVRIMKPERADWLSVLKH+RI NHPLYI+VAEAALVEITFEANTRDYTKIIH++GK+N
Sbjct: 123 AAWVRIMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQN 182

Query: 304 QLEDAEKILLRMRERGFACDQITLTTMIHIYSKADKLNLAKRTFEELKLLEQPLDKRSYG 363
           QLEDAEK+LL MRERGFACDQITLTTMIHIYSKADKL LAK+TFEELKLLEQ LDKRSYG
Sbjct: 183 QLEDAEKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYG 242

Query: 364 AMIMAYVRAGMPEEGENILKEMDAKDINAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLA 423
           AMIMAYVRAG+PEEGE ILKEMDAKDI AGSEVYKALLRAYSMAG+AEGAQRVFDAIQLA
Sbjct: 243 AMIMAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLA 302

Query: 424 AIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGIEPSDKCIALVLSAYEKENRLNAA 483
           AIPPDEKLCGLL+NAYLMAGQS+KAQIAFDNMRRAGIEPSDKCIAL LSAYEKENRLNAA
Sbjct: 303 AIPPDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAA 362

Query: 484 LELLIDLEKDNLMVGKEASEILAAWLKRLGVVEEVELVLREYTVKEAS 532
           LELLIDLEKDN+MVGKEAS+ILAAWLKRLGVVEE+E+VLREYT KE +
Sbjct: 363 LELLIDLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVN 403

[Close]

BLAST of CmUC05G082730 vs. ExPASy TrEMBL
Match: A0A5A7U612 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G002570 PE=4 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 2.0e-191
Identity = 349/408 (85.54%), Postives = 377/408 (92.40%), Query Frame = 0


Query: 124 LQSSNILHQLHPKQPLVNGNPGSSYSCYWRGSIAQTFGVLRSRRRCSQLATVAAIVEEFH 183
           + +SNIL+QLH   PLVNG   +S S YW+ SI     VL SRRRCSQ+ATV AIV+E H
Sbjct: 3   ISTSNILYQLH--LPLVNGTSNTSSSRYWKDSI-----VLNSRRRCSQMATVTAIVDELH 62

Query: 184 KLESEREKPRFRWVEVGSDITEMQKKAISQLPAKMTKRCKALMKQLICFSPQKGNLSDML 243
           KLESEREKPRFRWVEVG +ITE QK+AISQLP KMTK+CKA+MKQ+ICFSPQKG LSDML
Sbjct: 63  KLESEREKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDML 122

Query: 244 AAWVRIMKPERADWLSVLKHMRISNHPLYIEVAEAALVEITFEANTRDYTKIIHYHGKRN 303
           AAWVRIMKPERADWLSVLKH+RI NHPLYI+VAEAALVEITFEANTRDYTKIIH++GK+N
Sbjct: 123 AAWVRIMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQN 182

Query: 304 QLEDAEKILLRMRERGFACDQITLTTMIHIYSKADKLNLAKRTFEELKLLEQPLDKRSYG 363
           QLEDAEK+LL MRERGFACDQITLTTMIHIYSKADKL LAK+TFEELKLLEQ LDKRSYG
Sbjct: 183 QLEDAEKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYG 242

Query: 364 AMIMAYVRAGMPEEGENILKEMDAKDINAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLA 423
           AMIMAYVRAG+PEEGE ILKEMDAKDI AGSEVYKALLRAYSMAG+AEGAQRVFDAIQLA
Sbjct: 243 AMIMAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLA 302

Query: 424 AIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGIEPSDKCIALVLSAYEKENRLNAA 483
           AIPPDEKLCGLL+NAYLMAGQS+KAQIAFDNMRRAGIEPSDKCIAL LSAYEKENRLNAA
Sbjct: 303 AIPPDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAA 362

Query: 484 LELLIDLEKDNLMVGKEASEILAAWLKRLGVVEEVELVLREYTVKEAS 532
           LELLIDLEKDN+MVGKEAS+ILAAWLKRLGVVEE+E+VLREYT KE +
Sbjct: 363 LELLIDLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVN 403

[Close]

BLAST of CmUC05G082730 vs. TAIR 10
Match: AT1G01970.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 446.0 bits (1146), Expect = 4.1e-125
Identity = 216/364 (59.34%), Postives = 291/364 (79.95%), Query Frame = 0


Query: 167 RRCSQLATVAAIVEEFHKLESEREKPRFRWVEVGSDITEMQKKAISQLPAKMTKRCKALM 226
           R CS     +  + E  + E   +   F W +VG ++TE Q +AI+++P KM+KRC+ALM
Sbjct: 43  RLCSCKCNASLAIGEVVEKEDAEQSRSFNWADVGLNLTEEQDEAITRIPIKMSKRCQALM 102

Query: 227 KQLICFSPQKGNLSDMLAAWVRIMKPERADWLSVLKHMRISNHPLYIEVAEAALVEITFE 286
           +Q+ICFSP+KG+  D+L AW+R M P RADWLS+LK ++  + P YI+VAE +L++ +FE
Sbjct: 103 RQIICFSPEKGSFCDLLGAWLRRMNPIRADWLSILKELKNLDSPFYIKVAEFSLLQDSFE 162

Query: 287 ANTRDYTKIIHYHGKRNQLEDAEKILLRMRERGFACDQITLTTMIHIYSKADKLNLAKRT 346
           AN RDYTKIIHY+GK NQ+EDAE+ LL M+ RGF  DQ+TLT M+ +YSKA    LA+ T
Sbjct: 163 ANARDYTKIIHYYGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSKAGCHKLAEET 222

Query: 347 FEELKLLEQPLDKRSYGAMIMAYVRAGMPEEGENILKEMDAKDINAGSEVYKALLRAYSM 406
           F E+KLL +PLD RSYG+MIMAY+RAG+PE+GE++L+EMD+++I AG EVYKALLR YSM
Sbjct: 223 FNEIKLLGEPLDYRSYGSMIMAYIRAGVPEKGESLLREMDSQEICAGREVYKALLRDYSM 282

Query: 407 AGNAEGAQRVFDAIQLAAIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGIEPSDKC 466
            G+AEGA+RVFDA+Q+A I PD KLCGLLINAY ++GQSQ A++AF+NMR+AGI+ +DKC
Sbjct: 283 GGDAEGAKRVFDAVQIAGITPDVKLCGLLINAYSVSGQSQNARLAFENMRKAGIKATDKC 342

Query: 467 IALVLSAYEKENRLNAALELLIDLEKDNLMVGKEASEILAAWLKRLGVVEEVELVLREYT 526
           +ALVL+AYEKE +LN AL  L++LEKD++M+GKEAS +LA W K+LGVVEEVEL+LRE++
Sbjct: 343 VALVLAAYEKEEKLNEALGFLVELEKDSIMLGKEASAVLAQWFKKLGVVEEVELLLREFS 402

Query: 527 VKEA 531
             ++
Sbjct: 403 SSQS 406

[Close]

BLAST of CmUC05G082730 vs. TAIR 10
Match: AT1G19520.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 250.4 bits (638), Expect = 3.3e-66
Identity = 135/330 (40.91%), Postives = 203/330 (61.52%), Query Frame = 0


Query: 195 RWVEVGSDITEMQKKAISQLPAKMTKRCKALMKQLICFSPQKG-NLSDMLAAWVRIMKPE 254
           +WVE+   I E +++A  + P  +T +CK +M++L   S Q+G + S +LA W  +++P 
Sbjct: 291 KWVEMADKIHEAEEEADWREPKPVTGKCKLVMEKL--ESLQEGDDPSGLLAEWAELLEPN 350

Query: 255 RADWLSVLKHMRISNHPLYIEVAEAALVEITFEANTRDYTKIIHYHGKRNQLEDAEKILL 314
           R DW++++  +R  N   Y++VAE  L E +F A+  DY+K+IH H K N +ED E+IL 
Sbjct: 351 RVDWIALINQLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILK 410

Query: 315 RMRERGFACDQITLTTMIHIYSKADKLNLAKRTFEELKLLEQPLDKRSYGAMIMAYVRAG 374
           +M + G   D +T T ++H+YSK+     A   FE LK      D++ Y AMI+ YV AG
Sbjct: 411 KMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAG 470

Query: 375 MPEEGENILKEMDAKDINAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPP-DEKLC 434
            P+ GE ++KEM AK++ A  EVY ALLRAY+  G+A GA  +  ++Q A+  P   +  
Sbjct: 471 KPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAY 530

Query: 435 GLLINAYLMAGQSQKAQIAFDNMRRAGIEPSDKCIALVLSAYEKENRLNAALELLIDLEK 494
            L + AY  AGQ  KA+  FD MR+ G +P DKCIA ++ AY+ EN L+ AL LL+ LEK
Sbjct: 531 SLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEK 590

Query: 495 DNLMVGKEASEILAAWLKRLGVVEEVELVL 523
           D + +G     +L  W+  LG++EE E +L
Sbjct: 591 DGIEIGVITYTVLVDWMANLGLIEEAEQLL 618

[Close]

BLAST of CmUC05G082730 vs. TAIR 10
Match: AT2G02230.1 (phloem protein 2-B1 )

HSP 1 Score: 97.1 bits (240), Expect = 4.7e-20
Identity = 47/127 (37.01%), Postives = 73/127 (57.48%), Query Frame = 0


Query: 2   DRLPVECICCILAFTSPKDVCKIAGVSTAFRSAADSDLLWRTFLPPDYRQIIAQSSSSPL 61
           D LP +CI  +++ TSP+D C +A VS + +SAA SDL+W  FLP +Y  ++ QS+    
Sbjct: 33  DALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQSA---- 92

Query: 62  FWFLNSLPEKALYFHLSDHPLLIGTGNSSITLEKDSGSKCYMIGSRDIDATM--RQPYWT 121
               N L +K ++  L+D+ +L+  G  S  +EK SG KCYM+ + ++         YW 
Sbjct: 93  ----NHLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYWK 151

Query: 122 WKFVLQS 127
           W  V +S
Sbjct: 153 WITVPES 151

[Close]

BLAST of CmUC05G082730 vs. TAIR 10
Match: AT2G02340.1 (phloem protein 2-B8 )

HSP 1 Score: 96.3 bits (238), Expect = 8.0e-20
Identity = 47/123 (38.21%), Postives = 74/123 (60.16%), Query Frame = 0


Query: 1   MDRLPVECICCILAFTSPKDVCKIAGVSTAFRSAADSDLLWRTFLPPDYRQIIAQSSSSP 60
           +D LP EC+  I++FTSP+D C +A VS  F SA  SD++W  F+PP+Y  +I+QS +  
Sbjct: 36  LDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSRA-- 95

Query: 61  LFWFLNSLPEKALYFHLSDHPLLIGTGNSSITLEKDSGSKCYMIGSRDIDATMRQPYWTW 120
            F FL+   +K LYF L D  +LI  G  S+ +EK +  +C MI + ++         +W
Sbjct: 96  -FKFLS---KKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSW 152

Query: 121 KFV 124
           +++
Sbjct: 156 RWI 152

[Close]

BLAST of CmUC05G082730 vs. TAIR 10
Match: AT2G02240.1 (F-box family protein )

HSP 1 Score: 96.3 bits (238), Expect = 8.0e-20
Identity = 57/161 (35.40%), Postives = 83/161 (51.55%), Query Frame = 0


Query: 2   DRLPVECICCILAFTSPKDVCKIAGVSTAFRSAADSDLLWRTFLPPDYRQIIAQSSSSPL 61
           D LP +CI  I++FTSP+D C  A VS  F SA  SD +W  FLPP+Y  ++++S     
Sbjct: 62  DVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSRV--- 121

Query: 62  FWFLNSLPEKALYFHLSDHPLLIGTGNSSITLEKDSGSKCYMIGSRDIDAT--MRQPYWT 121
                   +K LYF L  +P+LI  G  S  LEK SG +C M+ S+++  T      YW 
Sbjct: 122 -----FASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQ 181

Query: 122 WKFVLQS-----SNIL----HQLHPKQPLVNGNPGSSYSCY 152
           W  + +S     + +L     ++  K      +PG+ YS Y
Sbjct: 182 WISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAY 214

The following BLAST results are available for this feature:

BLAST of CmUC05G082730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903030.1	7.8e-203	89.24	pentatricopeptide repeat-containing protein At1g01970 [Benincasa hispida] >XP_03...	[more]
XP_023526280.1	7.1e-196	87.41	pentatricopeptide repeat-containing protein At1g01970 isoform X1 [Cucurbita pepo...	[more]
XP_022980308.1	3.5e-195	87.41	pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022...	[more]
KAG6582566.1	6.0e-195	86.91	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022924339.1	3.0e-194	86.67	pentatricopeptide repeat-containing protein At1g01970 [Cucurbita moschata] >XP_0...	[more]

BLAST of CmUC05G082730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPC4	5.8e-124	59.34	Pentatricopeptide repeat-containing protein At1g01970 OS=Arabidopsis thaliana OX...	[more]
Q940Z1	9.8e-39	42.58	Pentatricopeptide repeat-containing protein At1g19525 OS=Arabidopsis thaliana OX...	[more]
Q6NPT8	6.6e-19	37.01	F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1	[more]
Q3E6P4	1.1e-18	35.40	F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1	[more]
Q9ZVQ8	1.1e-18	38.21	Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1	[more]

BLAST of CmUC05G082730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IR15	1.7e-195	87.41	pentatricopeptide repeat-containing protein At1g01970 OS=Cucurbita maxima OX=366...	[more]
A0A6J1EER0	1.4e-194	86.67	pentatricopeptide repeat-containing protein At1g01970 OS=Cucurbita moschata OX=3...	[more]
A0A5D3D032	8.8e-192	85.78	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3AWA7	2.0e-191	85.54	pentatricopeptide repeat-containing protein At1g01970 OS=Cucumis melo OX=3656 GN...	[more]
A0A5A7U612	2.0e-191	85.54	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of CmUC05G082730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01970.1	4.1e-125	59.34	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G19520.1	3.3e-66	40.91	pentatricopeptide (PPR) repeat-containing protein	[more]
AT2G02230.1	4.7e-20	37.01	phloem protein 2-B1	[more]
AT2G02340.1	8.0e-20	38.21	phloem protein 2-B8	[more]
AT2G02240.1	8.0e-20	35.40	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 298..318
None	No IPR available	GENE3D	1.20.1280.50		coord: 1..66 e-value: 3.1E-8 score: 35.3
None	No IPR available	PANTHER	PTHR46862:SF3	OS07G0661900 PROTEIN	coord: 174..530
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 4..44 e-value: 7.1E-6 score: 35.5
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 2..44 e-value: 9.7E-9 score: 34.9
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 1..44 score: 10.451268
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 242..423 e-value: 9.9E-29 score: 102.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 424..516 e-value: 7.8E-9 score: 37.1
IPR033443	Pentacotripeptide-repeat region of PRORP	PFAM	PF17177	PPR_long	coord: 302..415 e-value: 1.4E-6 score: 27.8
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 434..460 e-value: 0.12 score: 12.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 361..390 e-value: 3.3E-5 score: 21.8 coord: 292..323 e-value: 2.0E-5 score: 22.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 393..427 score: 8.61564
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 288..322 score: 9.196589
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 428..462 score: 9.799459
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 358..392 score: 10.347525
IPR044657	Pentatricopeptide repeat-containing protein NFD5-like	PANTHER	PTHR46862	OS07G0661900 PROTEIN	coord: 174..530
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 2..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC05G082730.1	CmUC05G082730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding