CmUC05G082070 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGTGCTTTTCGAGATGTGGACGCAACCTGTTTGTCATAAGTCCCAAAAGAAAAATTTATACGATAGGTCCCACGATCGATGCTACTTCAACCACAAAACCAGTGTACTACGAAGACCCAGTTGAATTTTATGCTCAACGAGAGGGTGTAATATCTTGGAAGTTTAAAATCACCAATTTCAACCAGACTCTGCTTTTGGCTTCTTCAAGATGATGTTCTCAAAATGGGCACAGGCCAGATCATGTGACAATGCACAACGTAATAAGAGCCATTGACTCATTCAGCAGGGATTCAATGATTTAGGTGATGCATGGAGGAGTGATCAAAAAGGGTTTTGAGTCAGAAGTGGCAGTTTCAACAGCCCTTCTTGGATTTTATTAA ATGTTGTGCTTTTCGAGATGTGGACGCAACCTGTTTGTCATAAGTCCCAAAAGAAAAATTTATACGATAGGTCCCACGATCGATGCTACTTCAACCACAAAACCAGTGTACTACGAAGACCCAGTTGAATTTTATGCTCAACGAGAGGACTCTGCTTTTGGCTTCTTCAAGATGATGTTCTCAAAATGGGCACAGGCCAGATCATGTGACAATGCACAACGAGTGATCAAAAAGGGTTTTGAGTCAGAAGTGGCAGTTTCAACAGCCCTTCTTGGATTTTATTAA ATGTTGTGCTTTTCGAGATGTGGACGCAACCTGTTTGTCATAAGTCCCAAAAGAAAAATTTATACGATAGGTCCCACGATCGATGCTACTTCAACCACAAAACCAGTGTACTACGAAGACCCAGTTGAATTTTATGCTCAACGAGAGGACTCTGCTTTTGGCTTCTTCAAGATGATGTTCTCAAAATGGGCACAGGCCAGATCATGTGACAATGCACAACGAGTGATCAAAAAGGGTTTTGAGTCAGAAGTGGCAGTTTCAACAGCCCTTCTTGGATTTTATTAA MLCFSRCGRNLFVISPKRKIYTIGPTIDATSTTKPVYYEDPVEFYAQREDSAFGFFKMMFSKWAQARSCDNAQRVIKKGFESEVAVSTALLGFY Homology
BLAST of CmUC05G082070 vs. NCBI nr
Match: XP_038885271.1 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g01580 [Benincasa hispida]) HSP 1 Score: 121.3 bits (303), Expect = 4.4e-24 Identity = 74/131 (56.49%), Postives = 78/131 (59.54%), Query Frame = 0
BLAST of CmUC05G082070 vs. NCBI nr
Match: XP_016898949.1 (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g56570 [Cucumis melo]) HSP 1 Score: 113.2 bits (282), Expect = 1.2e-21 Identity = 72/131 (54.96%), Postives = 76/131 (58.02%), Query Frame = 0
BLAST of CmUC05G082070 vs. NCBI nr
Match: XP_022974593.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita maxima] >XP_022974594.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 110.5 bits (275), Expect = 7.8e-21 Identity = 68/131 (51.91%), Postives = 75/131 (57.25%), Query Frame = 0
BLAST of CmUC05G082070 vs. NCBI nr
Match: KAG7028589.1 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 104.8 bits (260), Expect = 4.3e-19 Identity = 66/131 (50.38%), Postives = 73/131 (55.73%), Query Frame = 0
BLAST of CmUC05G082070 vs. NCBI nr
Match: KAG6597124.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 104.8 bits (260), Expect = 4.3e-19 Identity = 66/131 (50.38%), Postives = 73/131 (55.73%), Query Frame = 0
BLAST of CmUC05G082070 vs. ExPASy TrEMBL
Match: A0A0A0L489 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122420 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.5e-22 Identity = 72/131 (54.96%), Postives = 77/131 (58.78%), Query Frame = 0
BLAST of CmUC05G082070 vs. ExPASy TrEMBL
Match: A0A1S4DSI8 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g56570 OS=Cucumis melo OX=3656 GN=LOC103484166 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 5.8e-22 Identity = 72/131 (54.96%), Postives = 76/131 (58.02%), Query Frame = 0
BLAST of CmUC05G082070 vs. ExPASy TrEMBL
Match: A0A6J1IGR3 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111473280 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.8e-21 Identity = 68/131 (51.91%), Postives = 75/131 (57.25%), Query Frame = 0
BLAST of CmUC05G082070 vs. ExPASy TrEMBL
Match: A0A6J1F1Z2 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111441423 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 2.1e-19 Identity = 66/131 (50.38%), Postives = 73/131 (55.73%), Query Frame = 0
BLAST of CmUC05G082070 vs. ExPASy TrEMBL
Match: A0A6J1D2H4 (pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016401 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 3.0e-18 Identity = 65/132 (49.24%), Postives = 74/132 (56.06%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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