CmUC05G081280 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGTCAATTAAATTGGAGTTAGTTTTCTCAATTTGCTCACCGTATTGGTTAGGTCAAACTCGAAAGCAGAAAAATCCCATTACCAACCAACTTGACAAAGAAGAACAAAATCATAGAGCACCGTAATTAGGTAAAATGGCGGACAATCAATTGTTGCAGTGACCATCTCAATCCTGTAAAGCGTAAAATCCTTTCTCTTCTTCACGCGCACACTCTCCGGAGGTACTAGAATACTGATTTTTACTCTCCCAAGTTGCAGAAGGAAACATAGCCACAATTACAAACAACCCTCCTTCTTCAACTTCTCGATCTTTTTCTCTCGACTTCCCTTTTCCCCATGCTGTTTAGCTAGTTCATCGTCCTATTGGGATTTTAGGGGGAGAACTTTTGTCTTTTCAACTTGAATTTTGCTGCTTTCGTCTCTAAATGGCCGATGTTTTTAGATTCTCGTCGCATTCTTTCTATTTCTCCTCCAGTTCTTTACCACCCTCCTTTGCCTCGTCCTACAATTCCCTTCATCCTTCTCTTCCACCCATTCAAAACCCAGATAAGAGGTCGAGTCCTCTGCCATGTTATACCACTAGCTGCGCAATGCCTCTTTCTTTCAGACCCAGAAAGAGGTTGGTATCTTTCAAGGTACATAACTTGTCTTGTGGTCGGATTTCTATTGTATCATTGTTAATTCTTGAGATTTTTGTTGGATATCGAGTAAATTTGTGCAATTGTTTAGTAAGTAGTTTTATATATGAATTTAGTTATATTAGTACACGTACCCCCAAAAGTTGTGCGCTTTCGTGCTTGCCTGATGATGCCTGGAAGTATTTGTTTGTTGGGGTTGTTTAAATTTGATTTTCAATTTGAAGTTTCATGTGTCGAATTACTATACGGGCAGATGCTATGGAACCTTAAGGAGAAGGCCCATAGAAAAAGGGTGGATTCTTTTTATGAGTTCTCCGAGAAAGGAAGTTTATTGCCATGACAATGGAGCCAGCTGCTCGTATGTCTAATCCAACCGTTCAAGTTTTTGTGGTAGTTGCTGCTTGTACTTTTATCAGTTAAAAGAATTTGGCGACATTGCTTTATCACAATTCTTTTCCATGTGCATTCAATTCTCAGTTGACAGTTGTAGTCCGTTCTACCAAGCTGTTTTATGTTTCAGTGTAGCCTGATGCTGGTTAACTCTAAAAGAAGCCATGTTTCTATTTTATGGTTGGTTAAACCAAAAGGAGCTATGTATTTTTTTCCACCGTTTGAAGTTCCTTCAGAACTGGCGATGGCTATTGGGAAAATTTTTGGTTATGAATGAGTTAACAAGGGGAGAAATTGCTTGTTATTTGGAGAATTGTTGATTCTCCTATTGAGTTAGAAAGCCTGGGGGCCGATTTGAAGTTTACTTTATGGCTGGGAACCATAGTTAAATTGGATTTTTTGTGATTGCTTCCTTTTTTTTTTTGGAATGTCAACGGGACAACTTCTTGTAATTTCACCTTCGCTTTATGAGGGCAGGAGGATGTGTGATTTGGCCCTACTATCCTTTTATACATGATTATTTGTTTAAAAATATTTTTAGTCAACCGTTTTCTCAGTTGCTCATGTTAATTGTTCTCCAATGCAACAGGTACAGGCTGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAATGCACCAAACATGATTGATATACATTCCACACAGGAATTTTTAACTGCATTAAGTGAAGCTGGTGATAGATTAGTAATTGTAGAATTTTATGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGGTAACTTTTTTCATCGATGCTTTATATTTATCGGATTGTAAAGTTGACCTGTTGTTTGCGTTTTTCATTAGATAATCAGGACATGCTTTCAGCATTTAAAACTCAATGTAGGACCAGCTTATTGAAGTAGGCATTAAATAAATTGGTGTCATCAGTGACAATGACTGCTGCATTTGTTGGCTATCTAGATGAAAAGCTTTAGAATACACTTTGCAGCACTCAAGGTTTTGTACCTATCTATGTTAATGAGGTTGAAACTTGAAACCACAGACGATTGCTCAATCCTTTAAAATATATCCAAGATAGAAGTATAGTATTTTGGAAAATTGAGTAGTTTGATTAAGGAAGATTGTATTCTTTTTATTCTTTCCCTTGTTGGTTTTCTGCTGCGGCAGCAGTTCTGTCATTATCTGTCACTGGAGTTATAATTAGAAAGCTCCGGAACACTTCTTCTTTGCACGGCTGTTTCTTGCAAATGCTGCTCTTATCAAATGATTGATATTCATTGAATTTGATATTTTTTGTCTATTATCAAAAAAATGCATCTTACAGCAAAAATTGAGCTTGCCCCTATCATTATTTTTACTTTCCCGTTTTATGTTCTGATGTTGTTATATATGTTGAAATGGAACTGTCAGCTCTGCAGAACAGCTGATGAACACCCTGAGATTTTATTCCTAAAAGTCAATTTTGATGAAAACAAGCCAATGTGCAAAAGTTTGAATGTCAAGGTCCTTCCTTATTTCCACTTTTATCGTGGTGCTGACGGGCAGTTGGAATCCTTCTCATGCTCACTCGCAAAGGTTAGCAGTCTCCTCCCATCCCCACCTCCAATGTGTCAATTCATTCGATTTTATTGGTTAGCTTATAATGAGTAGAATGTGTTTTGAGATACAAATAACTTTTTGAGTCAATTCGCTCTATTTCATTGGTTAGCTTATATTGAGCAGAATATACTTAAAAATCTGAATAACTTTTCAATTTGTGGACACATGTGATAGAAGGATTGATGAGGATCTCTAGTATGGATAGAAAACTTTCCTTATCCTCATTTTTGAATAACTATTTTAAATTGTTGATCTTATGGCAGGAAGTGATATATTTTCTTTGTATTTTCATCAAATTATCAATATAGGCAAACATTTTCTAAATTTTAACTCTAACCTTTCTCCTTCCCGCAGTTTCAGAAAATTAAAGATGCAATTGAGATGCACAACACAGCTCGTTGCAGCATTGGGCCGCCAAAGGGAGTAGGAGATCTTATACTGGAGCCCTCCTTAGCTCCCCAAGACAAACAATAAACAGAAGCTTCATCACAGATTTTCTGCCAAATCCGCGTCGGTATCATTGTGCATTCCCCTGATATTAATAACCTCTTGTTTAAAAAAGATTCTGCAGTCAGTTATTCAATCTGTAAATTTGCATTCTTGTTTTGTAAAAGAATTCAGAAGTTGAGAATACCAATCATAAAATATTTTGCTGCCTTTGCCTTCTTGTGATGTTTGTACTTTGAAACTAGTTACATTGGATCAAGTTCTAAATAGATGCCATTGATTCATTTGGTTTGGTGGGCA GCGTCAATTAAATTGGAGTTAGTTTTCTCAATTTGCTCACCGTATTGGTTAGGTCAAACTCGAAAGCAGAAAAATCCCATTACCAACCAACTTGACAAAGAAGAACAAAATCATAGAGCACCGTAATTAGGTAAAATGGCGGACAATCAATTGTTGCAGTGACCATCTCAATCCTGTAAAGCGTAAAATCCTTTCTCTTCTTCACGCGCACACTCTCCGGAGGTACTAGAATACTGATTTTTACTCTCCCAAGTTGCAGAAGGAAACATAGCCACAATTACAAACAACCCTCCTTCTTCAACTTCTCGATCTTTTTCTCTCGACTTCCCTTTTCCCCATGCTGTTTAGCTAGTTCATCGTCCTATTGGGATTTTAGGGGGAGAACTTTTGTCTTTTCAACTTGAATTTTGCTGCTTTCGTCTCTAAATGGCCGATGTTTTTAGATTCTCGTCGCATTCTTTCTATTTCTCCTCCAGTTCTTTACCACCCTCCTTTGCCTCGTCCTACAATTCCCTTCATCCTTCTCTTCCACCCATTCAAAACCCAGATAAGAGGTCGAGTCCTCTGCCATGTTATACCACTAGCTGCGCAATGCCTCTTTCTTTCAGACCCAGAAAGAGGTTGGTATCTTTCAAGGTACAGGCTGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAATGCACCAAACATGATTGATATACATTCCACACAGGAATTTTTAACTGCATTAAGTGAAGCTGGTGATAGATTAGTAATTGTAGAATTTTATGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGCTCTGCAGAACAGCTGATGAACACCCTGAGATTTTATTCCTAAAAGTCAATTTTGATGAAAACAAGCCAATGTGCAAAAGTTTGAATGTCAAGGTCCTTCCTTATTTCCACTTTTATCGTGGTGCTGACGGGCAGTTGGAATCCTTCTCATGCTCACTCGCAAAGTTTCAGAAAATTAAAGATGCAATTGAGATGCACAACACAGCTCGTTGCAGCATTGGGCCGCCAAAGGGAGTAGGAGATCTTATACTGGAGCCCTCCTTAGCTCCCCAAGACAAACAATAAACAGAAGCTTCATCACAGATTTTCTGCCAAATCCGCGTCGGTATCATTGTGCATTCCCCTGATATTAATAACCTCTTGTTTAAAAAAGATTCTGCAGTCAGTTATTCAATCTGTAAATTTGCATTCTTGTTTTGTAAAAGAATTCAGAAGTTGAGAATACCAATCATAAAATATTTTGCTGCCTTTGCCTTCTTGTGATGTTTGTACTTTGAAACTAGTTACATTGGATCAAGTTCTAAATAGATGCCATTGATTCATTTGGTTTGGTGGGCA ATGGCCGATGTTTTTAGATTCTCGTCGCATTCTTTCTATTTCTCCTCCAGTTCTTTACCACCCTCCTTTGCCTCGTCCTACAATTCCCTTCATCCTTCTCTTCCACCCATTCAAAACCCAGATAAGAGGTCGAGTCCTCTGCCATGTTATACCACTAGCTGCGCAATGCCTCTTTCTTTCAGACCCAGAAAGAGGTTGGTATCTTTCAAGGTACAGGCTGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAATGCACCAAACATGATTGATATACATTCCACACAGGAATTTTTAACTGCATTAAGTGAAGCTGGTGATAGATTAGTAATTGTAGAATTTTATGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGCTCTGCAGAACAGCTGATGAACACCCTGAGATTTTATTCCTAAAAGTCAATTTTGATGAAAACAAGCCAATGTGCAAAAGTTTGAATGTCAAGGTCCTTCCTTATTTCCACTTTTATCGTGGTGCTGACGGGCAGTTGGAATCCTTCTCATGCTCACTCGCAAAGTTTCAGAAAATTAAAGATGCAATTGAGATGCACAACACAGCTCGTTGCAGCATTGGGCCGCCAAAGGGAGTAGGAGATCTTATACTGGAGCCCTCCTTAGCTCCCCAAGACAAACAATAA MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIQNPDKRSSPLPCYTTSCAMPLSFRPRKRLVSFKVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAPQDKQ Homology
BLAST of CmUC05G081280 vs. NCBI nr
Match: XP_008437900.1 (PREDICTED: thioredoxin-like 2, chloroplastic [Cucumis melo]) HSP 1 Score: 449.1 bits (1154), Expect = 2.2e-122 Identity = 216/224 (96.43%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of CmUC05G081280 vs. NCBI nr
Match: XP_038877589.1 (thioredoxin-like 2, chloroplastic [Benincasa hispida]) HSP 1 Score: 447.6 bits (1150), Expect = 6.4e-122 Identity = 215/224 (95.98%), Postives = 220/224 (98.21%), Query Frame = 0
BLAST of CmUC05G081280 vs. NCBI nr
Match: XP_004133814.1 (thioredoxin-like 2, chloroplastic [Cucumis sativus] >KGN56427.1 hypothetical protein Csa_010811 [Cucumis sativus]) HSP 1 Score: 447.2 bits (1149), Expect = 8.3e-122 Identity = 215/224 (95.98%), Postives = 221/224 (98.66%), Query Frame = 0
BLAST of CmUC05G081280 vs. NCBI nr
Match: KAA0048892.1 (thioredoxin-like 2 [Cucumis melo var. makuwa] >TYK20842.1 thioredoxin-like 2 [Cucumis melo var. makuwa]) HSP 1 Score: 425.2 bits (1092), Expect = 3.4e-115 Identity = 211/254 (83.07%), Postives = 219/254 (86.22%), Query Frame = 0
BLAST of CmUC05G081280 vs. NCBI nr
Match: XP_022924452.1 (thioredoxin-like 2, chloroplastic [Cucurbita moschata] >XP_023526881.1 thioredoxin-like 2, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6582671.1 Thioredoxin-like 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 414.5 bits (1064), Expect = 6.0e-112 Identity = 200/214 (93.46%), Postives = 206/214 (96.26%), Query Frame = 0
BLAST of CmUC05G081280 vs. ExPASy Swiss-Prot
Match: Q5TKD8 (Thioredoxin-like 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0200100 PE=2 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 2.4e-71 Identity = 138/198 (69.70%), Postives = 152/198 (76.77%), Query Frame = 0
BLAST of CmUC05G081280 vs. ExPASy Swiss-Prot
Match: Q8LEK4 (Thioredoxin-like 2-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g26160 PE=1 SV=2) HSP 1 Score: 234.2 bits (596), Expect = 1.5e-60 Identity = 121/198 (61.11%), Postives = 139/198 (70.20%), Query Frame = 0
BLAST of CmUC05G081280 vs. ExPASy Swiss-Prot
Match: Q8LCT3 (Thioredoxin-like 2-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g29670 PE=2 SV=2) HSP 1 Score: 233.4 bits (594), Expect = 2.5e-60 Identity = 127/203 (62.56%), Postives = 148/203 (72.91%), Query Frame = 0
BLAST of CmUC05G081280 vs. ExPASy Swiss-Prot
Match: Q10M18 (Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0326500 PE=2 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 4.1e-39 Identity = 77/169 (45.56%), Postives = 111/169 (65.68%), Query Frame = 0
BLAST of CmUC05G081280 vs. ExPASy Swiss-Prot
Match: O22779 (Thioredoxin-like 1-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g33270 PE=2 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 5.6e-36 Identity = 67/162 (41.36%), Postives = 110/162 (67.90%), Query Frame = 0
BLAST of CmUC05G081280 vs. ExPASy TrEMBL
Match: A0A1S3AV76 (thioredoxin-like 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483190 PE=4 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 1.1e-122 Identity = 216/224 (96.43%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of CmUC05G081280 vs. ExPASy TrEMBL
Match: A0A0A0L760 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G119600 PE=4 SV=1) HSP 1 Score: 447.2 bits (1149), Expect = 4.0e-122 Identity = 215/224 (95.98%), Postives = 221/224 (98.66%), Query Frame = 0
BLAST of CmUC05G081280 vs. ExPASy TrEMBL
Match: A0A5D3DB74 (Thioredoxin-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G001050 PE=4 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 1.6e-115 Identity = 211/254 (83.07%), Postives = 219/254 (86.22%), Query Frame = 0
BLAST of CmUC05G081280 vs. ExPASy TrEMBL
Match: A0A6J1E8Z8 (thioredoxin-like 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431951 PE=4 SV=1) HSP 1 Score: 414.5 bits (1064), Expect = 2.9e-112 Identity = 200/214 (93.46%), Postives = 206/214 (96.26%), Query Frame = 0
BLAST of CmUC05G081280 vs. ExPASy TrEMBL
Match: A0A6J1IY90 (thioredoxin-like 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111479561 PE=4 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 8.4e-112 Identity = 199/214 (92.99%), Postives = 206/214 (96.26%), Query Frame = 0
BLAST of CmUC05G081280 vs. TAIR 10
Match: AT4G29670.1 (atypical CYS HIS rich thioredoxin 2 ) HSP 1 Score: 269.6 bits (688), Expect = 2.2e-72 Identity = 143/222 (64.41%), Postives = 166/222 (74.77%), Query Frame = 0
BLAST of CmUC05G081280 vs. TAIR 10
Match: AT4G26160.1 (atypical CYS HIS rich thioredoxin 1 ) HSP 1 Score: 234.2 bits (596), Expect = 1.0e-61 Identity = 121/198 (61.11%), Postives = 139/198 (70.20%), Query Frame = 0
BLAST of CmUC05G081280 vs. TAIR 10
Match: AT4G29670.2 (atypical CYS HIS rich thioredoxin 2 ) HSP 1 Score: 233.4 bits (594), Expect = 1.8e-61 Identity = 127/203 (62.56%), Postives = 148/203 (72.91%), Query Frame = 0
BLAST of CmUC05G081280 vs. TAIR 10
Match: AT2G33270.1 (atypical CYS HIS rich thioredoxin 3 ) HSP 1 Score: 152.5 bits (384), Expect = 3.9e-37 Identity = 67/162 (41.36%), Postives = 110/162 (67.90%), Query Frame = 0
BLAST of CmUC05G081280 vs. TAIR 10
Match: AT1G08570.1 (atypical CYS HIS rich thioredoxin 4 ) HSP 1 Score: 148.3 bits (373), Expect = 7.4e-36 Identity = 63/129 (48.84%), Postives = 93/129 (72.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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