CmUC05G080570 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC05G080570
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Protein transport protein Sec61 subunit beta
Location	CmU531Chr05: 381564 .. 383392 (+)
RNA-Seq Expression	CmUC05G080570
Synteny	CmUC05G080570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCCGGTCGGTTCTTAATACGAGAAAACCGAAAACAAAATATCCTAGAAGGAGAAAACCAATGGAATAAGACACGTGGTAGGTAGGTATTGGTTGGGAATACGTCAAATACAAATAGTCTAAAAATCTATAAAAATAGAAAAAAAGAGAGTTAGAATTAGCATTCTCCGAACTCGCGATCCTTTGGTGGCTACCGATCCCAAACAACTCTTCAATTTGACTCAGGCAAGTTCGCCGTCCATCTCTCTCTCTTTCTTTCAATCTAAGATCTGCCTCTTCTACTTTTATGAATTATGAACCAGATCTAGATCTCCATTCCGATTCATTCTTCATACAATTAGGTAAATTAGGGTTTGCGATTTCCTACCTGCCTGTTGCGTCTCGGACTTTGGATGATCGTCAGATCTTGATTTCATATCATTATTATTATTATTATTATTATTTGCGAATTGATGTTTGAGTAAATTAGATTCTTTGCGCATCTTGAGAATGTTCGTTTCTTTACTTTTTCTCTTCGATAAGCTTTGAATTTTCTGCAAAGTTTTCTAGAACAAAATTCTCTCCTATTTTCCATTTGGATTTTCTGTTGCAAAGCAGATCTCCCTCTTGACTTAACAGAAGTTAGCATGCACATTTCTTCCTTCTTTTTCTTCCGTTTGGTGTTAATTTATGGTGGTTGTTATGATAAATTAGGACTTGTAGTTGTCTGTTCCCATGTGAATGAATATTGTATATTGGTTTCTGCAACTTATGGGTTGAGATAGGTTGCAATTTATGGACTCTGAACTTCTGTGGAGAGTTCATTTTTTCTTCAATTTGGACATTTCTGGTTTAAGGCTTTGCAGGTCTAGGATTTAAGACACTTTTTTCTTCCTGGCCATAAACGGTTAGATGAGCTTCTAATTTCATGCATTATTTGGTACATTGTAGACATGCTCTCCAATTTTCTTTTTGATCTGAATCAGTTCCGAATGAACCAGTATTTAATCTCAACTCATGCAGTATGACCTACTAATTTGTTTCACTAGTATTGCCTCGTTTTAAAAATGTTTGGTATGATACAAAAATCCAAACTCATGTCAGCGAAAATCTATACGGATGTTTGGAGTTCTGGCTAGATTTTTTTTATCTTTTTTTTTTCCCTCCCTCCAAGAACGATTGCGTGATAGGTTGTTTTGTTAGATAATGAGGTTTCGATAACTTGTGATTTGAGAAAAGTTAGGAAAAGGAAAGGAAAGGTTGCAGGTTAACATTCCTTCCTGCCTACAATGTTCTTATTTGATTCAGAAATGTTTTAACAAAGGATGTCTTCCGCGTTCTTCATTGCTGTCAATTGGTCAATGGAAGTTCCAACTTTACTTACTCTTCGTCAATACAGAATGGCACTAGGTGGAGCAAATCCCCAGAGAGGAAGTGCGGCAGCTACTGCCAGCATGCGTAGGAGAAGGACAACAAGTTCTGGTACATCTGGAGGGGCAGCTGGAACAATGCTGCAGTTCTACACGGATGATGCTCCTGGACTCAAGATATCCCCCAATGTTGTTCTCGTCATGAGCATTGGTTTCATTGCTTTTGTTGCCATTCTCCATGTTATGGGTAAGCTATACTTCGTGCGAAGAGAAGCCTAGTGGGTTTTGCCCTGATAAAGTGTGATGAATATTTAAATTCAATGTGACAAAAGTTTAATTTTGATCTGAATTCTCTGTCTTTCATTACAGTAAAACTAATTTGGATTTTGTTACTAGTTAGAATGAAAGAGTTGTTCTGTTCTGGTCTTAAATTAGTTTTTTTGTTACTAGTGAACTGTGATTTACTTAGCCGATAA

mRNA sequence

ATGAAGGCCGGTCGGTTCTTAATACGAGAAAACCGAAAACAAAATATCCTAGAAGGAGAAAACCAATGGAATAAGACACGTGGTAGATCTAGATCTCCATTCCGATTCATTCTTCATACAATTAGAATGGCACTAGGTGGAGCAAATCCCCAGAGAGGAAGTGCGGCAGCTACTGCCAGCATGCGTAGGAGAAGGACAACAAGTTCTGGTACATCTGGAGGGGCAGCTGGAACAATGCTGCAGTTCTACACGGATGATGCTCCTGGACTCAAGATATCCCCCAATGTTGTTCTCGTCATGAGCATTGGTTTCATTGCTTTTGTTGCCATTCTCCATGTTATGGTGAACTGTGATTTACTTAGCCGATAA

Coding sequence (CDS)

ATGAAGGCCGGTCGGTTCTTAATACGAGAAAACCGAAAACAAAATATCCTAGAAGGAGAAAACCAATGGAATAAGACACGTGGTAGATCTAGATCTCCATTCCGATTCATTCTTCATACAATTAGAATGGCACTAGGTGGAGCAAATCCCCAGAGAGGAAGTGCGGCAGCTACTGCCAGCATGCGTAGGAGAAGGACAACAAGTTCTGGTACATCTGGAGGGGCAGCTGGAACAATGCTGCAGTTCTACACGGATGATGCTCCTGGACTCAAGATATCCCCCAATGTTGTTCTCGTCATGAGCATTGGTTTCATTGCTTTTGTTGCCATTCTCCATGTTATGGTGAACTGTGATTTACTTAGCCGATAA

Protein sequence

MKAGRFLIRENRKQNILEGENQWNKTRGRSRSPFRFILHTIRMALGGANPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMVNCDLLSR

Homology

[Close]

BLAST of CmUC05G080570 vs. NCBI nr
Match: XP_038875187.1 (protein transport protein Sec61 subunit beta-like isoform X1 [Benincasa hispida])

HSP 1 Score: 144.4 bits (363), Expect = 6.3e-31
Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 36  FILHTIRMALGGANPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPN 95
           FILHTIRMALGGA PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPN
Sbjct: 12  FILHTIRMALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPN 71

Query: 96  VVLVMSIGFIAFVAILHVM 115
           VVLVMSIGFIAFVAILHVM
Sbjct: 72  VVLVMSIGFIAFVAILHVM 90

[Close]

BLAST of CmUC05G080570 vs. NCBI nr
Match: XP_022146520.1 (protein transport protein Sec61 subunit beta-like [Momordica charantia] >XP_022924769.1 protein transport protein Sec61 subunit beta-like [Cucurbita moschata] >XP_022924770.1 protein transport protein Sec61 subunit beta-like [Cucurbita moschata] >XP_022980768.1 protein transport protein Sec61 subunit beta-like [Cucurbita maxima] >XP_023526368.1 protein transport protein Sec61 subunit beta-like [Cucurbita pepo subsp. pepo] >XP_038875266.1 protein transport protein Sec61 subunit beta-like isoform X2 [Benincasa hispida] >KAG6582719.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020688.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 130.2 bits (326), Expect = 1.2e-26
Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 43  MALGGANPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 102
           MALGGA PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1   MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 103 GFIAFVAILHVM 115
           GFIAFVAILHVM
Sbjct: 61  GFIAFVAILHVM 72

[Close]

BLAST of CmUC05G080570 vs. NCBI nr
Match: KAE8650213.1 (hypothetical protein Csa_009973 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 1.6e-26
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 43  MALGGANPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 102
           MALGG  PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1   MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 103 GFIAFVAILHVMV 116
           GFIAFVA+LHVMV
Sbjct: 61  GFIAFVAVLHVMV 73

[Close]

BLAST of CmUC05G080570 vs. NCBI nr
Match: XP_011650635.1 (protein transport protein Sec61 subunit beta [Cucumis sativus])

HSP 1 Score: 129.0 bits (323), Expect = 2.7e-26
Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 0


Query: 43  MALGGANPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 102
           MALGG  PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1   MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 103 GFIAFVAILHVM 115
           GFIAFVA+LHVM
Sbjct: 61  GFIAFVAVLHVM 72

[Close]

BLAST of CmUC05G080570 vs. NCBI nr
Match: XP_022950482.1 (protein transport protein Sec61 subunit beta-like [Cucurbita moschata] >XP_022974254.1 protein transport protein Sec61 subunit beta-like [Cucurbita maxima] >XP_022975750.1 protein transport protein Sec61 subunit beta-like [Cucurbita maxima] >XP_023541021.1 protein transport protein Sec61 subunit beta-like [Cucurbita pepo subsp. pepo] >KAG6597025.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028503.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 128.6 bits (322), Expect = 3.6e-26
Identity = 70/72 (97.22%), Postives = 70/72 (97.22%), Query Frame = 0


Query: 43  MALGGANPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 102
           MALGG  PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1   MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 103 GFIAFVAILHVM 115
           GFIAFVAILHVM
Sbjct: 61  GFIAFVAILHVM 72

[Close]

BLAST of CmUC05G080570 vs. ExPASy Swiss-Prot
Match: P38389 (Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana OX=3702 GN=At2g45070 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.9e-22
Identity = 59/74 (79.73%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 45  LGGANPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVM 104
           +G   PQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+M
Sbjct: 2   VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 61

Query: 105 SIGFIAFVAILHVM 115
           SIGFIAFVA+LHVM
Sbjct: 62  SIGFIAFVAVLHVM 75

[Close]

BLAST of CmUC05G080570 vs. ExPASy Swiss-Prot
Match: A8I6P9 (Protein transport protein Sec61 subunit beta OS=Chlamydomonas reinhardtii OX=3055 GN=SEC61B PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-07
Identity = 35/74 (47.30%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 43  MALGGANPQRGSAAATASMRRRRTTSSGTSG--GAAGTMLQFYTDDAPGLKISPNVVLVM 102
           +A GG +       A  ++RRR    SG SG   A    + FYTDD PG K+SP VV+ M
Sbjct: 12  VARGGRSSSNAPTGAAGALRRRPVRGSGGSGTTKAQQAAMNFYTDDTPGWKMSPVVVITM 71

Query: 103 SIGFIAFVAILHVM 115
           S+ FIAFV ILHV+
Sbjct: 72  SLSFIAFVTILHVV 85

[Close]

BLAST of CmUC05G080570 vs. ExPASy Swiss-Prot
Match: Q9HFC7 (Protein transport protein Sec61 subunit beta OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=SBH1 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 9.5e-06
Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 49  NPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFV 108
           N QR  A A+   +R  +T S  +GG++ TML+ YTD++ GLK+ P VV+V+S+GFI  V
Sbjct: 20  NAQRQEAKAS---QRPTSTRSVGAGGSSSTMLKLYTDESQGLKVDPVVVMVLSLGFIFSV 79

Query: 109 AILHVM 115
             LH++
Sbjct: 80  VALHIL 82

[Close]

BLAST of CmUC05G080570 vs. ExPASy Swiss-Prot
Match: P60467 (Protein transport protein Sec61 subunit beta OS=Canis lupus familiaris OX=9615 GN=SEC61B PE=1 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 4.7e-05
Identity = 32/75 (42.67%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 47  GANPQRGSA--AATASMRRRRTTSSG------TSGGAAGTMLQFYTDDAPGLKISPNVVL 106
           G +P +  A  AA +++R+R+  S G      T+    G M +FYT+D+PGLK+ P  VL
Sbjct: 15  GRSPSKAVAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVL 74

Query: 107 VMSIGFIAFVAILHV 114
           VMS+ FIA V +LH+
Sbjct: 75  VMSLLFIASVFMLHI 89

[Close]

BLAST of CmUC05G080570 vs. ExPASy Swiss-Prot
Match: P60468 (Protein transport protein Sec61 subunit beta OS=Homo sapiens OX=9606 GN=SEC61B PE=1 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 4.7e-05
Identity = 32/75 (42.67%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 47  GANPQRGSA--AATASMRRRRTTSSG------TSGGAAGTMLQFYTDDAPGLKISPNVVL 106
           G +P +  A  AA +++R+R+  S G      T+    G M +FYT+D+PGLK+ P  VL
Sbjct: 15  GRSPSKAVAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVL 74

Query: 107 VMSIGFIAFVAILHV 114
           VMS+ FIA V +LH+
Sbjct: 75  VMSLLFIASVFMLHI 89

[Close]

BLAST of CmUC05G080570 vs. ExPASy TrEMBL
Match: A0A6J1EFZ9 (Protein transport protein Sec61 subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111432170 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.9e-27
Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 43  MALGGANPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 102
           MALGGA PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1   MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 103 GFIAFVAILHVM 115
           GFIAFVAILHVM
Sbjct: 61  GFIAFVAILHVM 72

[Close]

BLAST of CmUC05G080570 vs. ExPASy TrEMBL
Match: A0A6J1J088 (Protein transport protein Sec61 subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111480059 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.9e-27
Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 43  MALGGANPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 102
           MALGGA PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1   MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 103 GFIAFVAILHVM 115
           GFIAFVAILHVM
Sbjct: 61  GFIAFVAILHVM 72

[Close]

BLAST of CmUC05G080570 vs. ExPASy TrEMBL
Match: A0A6J1CXG1 (Protein transport protein Sec61 subunit beta OS=Momordica charantia OX=3673 GN=LOC111015719 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.9e-27
Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 43  MALGGANPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 102
           MALGGA PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1   MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 103 GFIAFVAILHVM 115
           GFIAFVAILHVM
Sbjct: 61  GFIAFVAILHVM 72

[Close]

BLAST of CmUC05G080570 vs. ExPASy TrEMBL
Match: A0A0A0L6Y8 (Protein transport protein Sec61 subunit beta OS=Cucumis sativus OX=3659 GN=Csa_3G117430 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.3e-26
Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 0


Query: 43  MALGGANPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 102
           MALGG  PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1   MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 103 GFIAFVAILHVM 115
           GFIAFVA+LHVM
Sbjct: 61  GFIAFVAVLHVM 72

[Close]

BLAST of CmUC05G080570 vs. ExPASy TrEMBL
Match: A0A6J1IH25 (Protein transport protein Sec61 subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111472887 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.7e-26
Identity = 70/72 (97.22%), Postives = 70/72 (97.22%), Query Frame = 0


Query: 43  MALGGANPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 102
           MALGG  PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1   MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 103 GFIAFVAILHVM 115
           GFIAFVAILHVM
Sbjct: 61  GFIAFVAILHVM 72

[Close]

BLAST of CmUC05G080570 vs. TAIR 10
Match: AT2G45070.1 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-23
Identity = 59/74 (79.73%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 45  LGGANPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVM 104
           +G   PQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+M
Sbjct: 2   VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 61

Query: 105 SIGFIAFVAILHVM 115
           SIGFIAFVA+LHVM
Sbjct: 62  SIGFIAFVAVLHVM 75

[Close]

BLAST of CmUC05G080570 vs. TAIR 10
Match: AT2G45070.2 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-23
Identity = 59/74 (79.73%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 45  LGGANPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVM 104
           +G   PQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+M
Sbjct: 2   VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 61

Query: 105 SIGFIAFVAILHVM 115
           SIGFIAFVA+LHVM
Sbjct: 62  SIGFIAFVAVLHVM 75

[Close]

BLAST of CmUC05G080570 vs. TAIR 10
Match: AT2G45070.3 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-23
Identity = 59/74 (79.73%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 45  LGGANPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVM 104
           +G   PQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+M
Sbjct: 2   VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 61

Query: 105 SIGFIAFVAILHVM 115
           SIGFIAFVA+LHVM
Sbjct: 62  SIGFIAFVAVLHVM 75

[Close]

BLAST of CmUC05G080570 vs. TAIR 10
Match: AT2G45070.4 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-23
Identity = 59/74 (79.73%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 45  LGGANPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVM 104
           +G   PQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+M
Sbjct: 2   VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 61

Query: 105 SIGFIAFVAILHVM 115
           SIGFIAFVA+LHVM
Sbjct: 62  SIGFIAFVAVLHVM 75

[Close]

BLAST of CmUC05G080570 vs. TAIR 10
Match: AT3G60540.1 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 105.1 bits (261), Expect = 3.9e-23
Identity = 57/71 (80.28%), Postives = 63/71 (88.73%), Query Frame = 0


Query: 45  LGGANPQRGSAAATASMRRRRTT-SSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIG 104
           +GG  PQRGSAAATASMRRR+    S ++GG AGTMLQFYTDDAPGLKISPNVVL+MSIG
Sbjct: 2   VGGGAPQRGSAAATASMRRRKPAGGSSSAGGGAGTMLQFYTDDAPGLKISPNVVLIMSIG 61

Query: 105 FIAFVAILHVM 115
           FIAFVA+LHVM
Sbjct: 62  FIAFVAVLHVM 72

The following BLAST results are available for this feature:

BLAST of CmUC05G080570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875187.1	6.3e-31	98.73	protein transport protein Sec61 subunit beta-like isoform X1 [Benincasa hispida]	[more]
XP_022146520.1	1.2e-26	98.61	protein transport protein Sec61 subunit beta-like [Momordica charantia] >XP_0229...	[more]
KAE8650213.1	1.6e-26	95.89	hypothetical protein Csa_009973 [Cucumis sativus]	[more]
XP_011650635.1	2.7e-26	95.83	protein transport protein Sec61 subunit beta [Cucumis sativus]	[more]
XP_022950482.1	3.6e-26	97.22	protein transport protein Sec61 subunit beta-like [Cucurbita moschata] >XP_02297...	[more]

BLAST of CmUC05G080570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P38389	1.9e-22	79.73	Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana OX=3702 GN=...	[more]
A8I6P9	1.3e-07	47.30	Protein transport protein Sec61 subunit beta OS=Chlamydomonas reinhardtii OX=305...	[more]
Q9HFC7	9.5e-06	45.45	Protein transport protein Sec61 subunit beta OS=Yarrowia lipolytica (strain CLIB...	[more]
P60467	4.7e-05	42.67	Protein transport protein Sec61 subunit beta OS=Canis lupus familiaris OX=9615 G...	[more]
P60468	4.7e-05	42.67	Protein transport protein Sec61 subunit beta OS=Homo sapiens OX=9606 GN=SEC61B P...	[more]

BLAST of CmUC05G080570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EFZ9	5.9e-27	98.61	Protein transport protein Sec61 subunit beta OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1J088	5.9e-27	98.61	Protein transport protein Sec61 subunit beta OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1CXG1	5.9e-27	98.61	Protein transport protein Sec61 subunit beta OS=Momordica charantia OX=3673 GN=L...	[more]
A0A0A0L6Y8	1.3e-26	95.83	Protein transport protein Sec61 subunit beta OS=Cucumis sativus OX=3659 GN=Csa_3...	[more]
A0A6J1IH25	1.7e-26	97.22	Protein transport protein Sec61 subunit beta OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of CmUC05G080570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45070.1	1.4e-23	79.73	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT2G45070.2	1.4e-23	79.73	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT2G45070.3	1.4e-23	79.73	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT2G45070.4	1.4e-23	79.73	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT3G60540.1	3.9e-23	80.28	Preprotein translocase Sec, Sec61-beta subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016482	Protein transport protein SecG/Sec61-beta/Sbh	PFAM	PF03911	Sec61_beta	coord: 76..114 e-value: 8.0E-18 score: 64.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..74
None	No IPR available	PANTHER	PTHR13509:SF2	PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA	coord: 43..116
IPR030671	Protein transport Sec61-beta/Sbh	PANTHER	PTHR13509	SEC61 SUBUNIT BETA	coord: 43..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC05G080570.1	CmUC05G080570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031204	posttranslational protein targeting to membrane, translocation
biological_process	GO:0006616	SRP-dependent cotranslational protein targeting to membrane, translocation
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005784	Sec61 translocon complex