CmUC05G080460 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC05G080460
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	60S acidic ribosomal protein P1-like
Location	CmU531Chr05: 262553 .. 263907 (+)
RNA-Seq Expression	CmUC05G080460
Synteny	CmUC05G080460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAAGCCCATATCAGAAGCTTCAATAAAAACCAAGTTTGAGGGACTTCTCAAACCCTAGAACGCTTCGTATTGTGCAGCCAAGAAGAGACATTTCATCTGGTCTAAAATCTCTCTTCCCCTCAATTTTCTGCTGTTCTTCTTGTGTTTGTATTTCTGTAGTTCCTAATACTTGTTCTTCTTCTTGTTTTTCTGGGTTTCTTTTTCCTAACTTTGCTAGCTTGTCAACGTGCAGTGAAAAATGTCGGTCGGAGAAGTTGCTTGCTCCTACGCTGCTCTCATCCTCTACGACGACAATATCCCTATTACCGTATGCTTCTCTTTAATCCTGGCACCCTCCTTCAGTATTTAATTTCTTTCTTACTCATAACTTTCGGGATCGAAGTAATTAGTAGGATATTTTTACCATGTGTTGTTCTATGCGATTGGCTGGATATTGGGACTATCTCAACGTTTTGCGTGATTTCCGTTTCGAATAGATCAATTACGAAACATGTAGTATCAAAATATTATTCGGTTTTTTGTACATTTATATTTATAAAAGTAATTCTTATAATCTAGATCTTCTTCTTCTGCTATTATTATTCCCTTGTTCGCCGCTTTATGAAATTTGTTCCAATATATGATAATTGCCTTTTCTTTTTTGTTTCTATGTTAGTGTTCGTTTGCTAATTATTTGTAAGGAAATAAGACACCAAAATTTGTTTTTTAAACAGGCGGAAAAGATTGCTGCGCTTGTAAAGGCGGCTAATGTGGACGGTGTGGAGTCTTACTGGTACAGTCTTTTTGCTAAGTTGGCCGAGAAGCGTAACATTGGTGATTTAATCCTCAATGTTGGGGCTGGTGGTGGTGCCTCAGTCGCAGCTGCTGTCCCAGCTGGTGGAGCTGCTGGTGGCGCTGCTGCCGCAGCTGCTCCTCCACCTGAAGAGAAAAAGGTAACCAATAGCCATTTCATTCCGAGGAATGACATGTTATAGTCTATTCTATTTTGGAAGCTTGGTTTTGAGGTACTAATATGTACATCATCATGACATGAGATTGGATTACTTTTGTTACTTGCAGGAAGAACCTAAGGAAGAGAGTGACGATGATATGGGATTCAGTTTGTTCGATTAGGTCGAGATATGGTTTCGCATATTTTGTTCTAGGTTGATTATCTTTTAAATGTCTGATGGGGCCCTTGTTATTTTACAGAGATGTAATTTTGGACATCCTTGACAAATTTGCCAGAAGTTTTGATTTTAATATGATCTGATTTCATCTTTTTGTTTGAGATATATTATAATTATATATATCATATGTGTCCTCTCAGTATGGTAGTTTTCTGATATGTTGGTTATTTTTCTGCGATTGCGAC

mRNA sequence

TCAAGCCCATATCAGAAGCTTCAATAAAAACCAAGTTTGAGGGACTTCTCAAACCCTAGAACGCTTCGTATTGTGCAGCCAAGAAGAGACATTTCATCTGTGAAAAATGTCGGTCGGAGAAGTTGCTTGCTCCTACGCTGCTCTCATCCTCTACGACGACAATATCCCTATTACCGCGGAAAAGATTGCTGCGCTTGTAAAGGCGGCTAATGTGGACGGTGTGGAGTCTTACTGGTACAGTCTTTTTGCTAAGTTGGCCGAGAAGCGTAACATTGGTGATTTAATCCTCAATGTTGGGGCTGGTGGTGGTGCCTCAGTCGCAGCTGCTGTCCCAGCTGGTGGAGCTGCTGGTGGCGCTGCTGCCGCAGCTGCTCCTCCACCTGAAGAGAAAAAGGTAACCAATAGCCATTTCATTCCGAGGAATGACATGGAAGAACCTAAGGAAGAGAGTGACGATGATATGGGATTCAGTTTGTTCGATTAGGTCGAGATATGGTTTCGCATATTTTGTTCTAGGTTGATTATCTTTTAAATGTCTGATGGGGCCCTTGTTATTTTACAGAGATGTAATTTTGGACATCCTTGACAAATTTGCCAGAAGTTTTGATTTTAATATGATCTGATTTCATCTTTTTGTTTGAGATATATTATAATTATATATATCATATGTGTCCTCTCAGTATGGTAGTTTTCTGATATGTTGGTTATTTTTCTGCGATTGCGAC

Coding sequence (CDS)

ATGTCGGTCGGAGAAGTTGCTTGCTCCTACGCTGCTCTCATCCTCTACGACGACAATATCCCTATTACCGCGGAAAAGATTGCTGCGCTTGTAAAGGCGGCTAATGTGGACGGTGTGGAGTCTTACTGGTACAGTCTTTTTGCTAAGTTGGCCGAGAAGCGTAACATTGGTGATTTAATCCTCAATGTTGGGGCTGGTGGTGGTGCCTCAGTCGCAGCTGCTGTCCCAGCTGGTGGAGCTGCTGGTGGCGCTGCTGCCGCAGCTGCTCCTCCACCTGAAGAGAAAAAGGTAACCAATAGCCATTTCATTCCGAGGAATGACATGGAAGAACCTAAGGAAGAGAGTGACGATGATATGGGATTCAGTTTGTTCGATTAG

Protein sequence

MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDMGFSLFD

Homology

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BLAST of CmUC05G080460 vs. NCBI nr
Match: XP_008437779.1 (PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo] >KAA0048820.1 60S acidic ribosomal protein P1-like [Cucumis melo var. makuwa] >TYK20773.1 60S acidic ribosomal protein P1-like [Cucumis melo var. makuwa])

HSP 1 Score: 185.7 bits (470), Expect = 2.5e-43
Identity = 105/125 (84.00%), Postives = 107/125 (85.60%), Query Frame = 0


Query: 1   MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLI 60
           MS GE+ACSYAALILYDDNIPITAEKIA LVKAANV  VESYWYSLFAKLAEKRNIGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAANVSDVESYWYSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDMG 120
           LNVGAGGGA+VAAAVPAGGAA G AAAAAPPPEEKK            EEPKEESDDDMG
Sbjct: 61  LNVGAGGGAAVAAAVPAGGAAAGGAAAAAPPPEEKK------------EEPKEESDDDMG 113

Query: 121 FSLFD 126
           FSLFD
Sbjct: 121 FSLFD 113

[Close]

BLAST of CmUC05G080460 vs. NCBI nr
Match: XP_022144008.1 (60S acidic ribosomal protein P1-like [Momordica charantia])

HSP 1 Score: 183.3 bits (464), Expect = 1.3e-42
Identity = 103/125 (82.40%), Postives = 108/125 (86.40%), Query Frame = 0


Query: 1   MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLI 60
           MS  E+ACSYAA+ILYDD I ITAEKIAALVKAANV GV+SYWYSLFAKLAEKRNIGDLI
Sbjct: 1   MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDMG 120
           +NVGAGGGA+VAAAVPAGGAAGGAAAAAAPPPEEKK            EEPKEESDDDMG
Sbjct: 61  MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKK------------EEPKEESDDDMG 113

Query: 121 FSLFD 126
           FSLFD
Sbjct: 121 FSLFD 113

[Close]

BLAST of CmUC05G080460 vs. NCBI nr
Match: XP_038883955.1 (60S acidic ribosomal protein P1-like [Benincasa hispida])

HSP 1 Score: 181.4 bits (459), Expect = 4.8e-42
Identity = 102/125 (81.60%), Postives = 106/125 (84.80%), Query Frame = 0


Query: 1   MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLI 60
           MS GE+ACSYAALILYDDNIPITAEKIA +VKAANV  VESYW+ LFAKLAEKRNIGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDMG 120
           LNVGAGGGA+VAAAVPA G AGGAAAAAAPPPEEKK            EEPKEESDDDMG
Sbjct: 61  LNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKK------------EEPKEESDDDMG 113

Query: 121 FSLFD 126
           FSLFD
Sbjct: 121 FSLFD 113

[Close]

BLAST of CmUC05G080460 vs. NCBI nr
Match: XP_004133766.1 (60S acidic ribosomal protein P1 [Cucumis sativus] >KGN56349.1 hypothetical protein Csa_009966 [Cucumis sativus])

HSP 1 Score: 180.6 bits (457), Expect = 8.1e-42
Identity = 102/125 (81.60%), Postives = 105/125 (84.00%), Query Frame = 0


Query: 1   MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLI 60
           MS GE+ACSYAALILYDDNIPITAEKIA LVKAA V  VESYWY LFAKLAEKR+IGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLI 60

Query: 61  LNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDMG 120
           LNVGAGGGA+VAAA PAGGAAGG AAAAAPPPEEKK            EEPKEESDDDMG
Sbjct: 61  LNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK------------EEPKEESDDDMG 113

Query: 121 FSLFD 126
           FSLFD
Sbjct: 121 FSLFD 113

[Close]

BLAST of CmUC05G080460 vs. NCBI nr
Match: XP_022974253.1 (60S acidic ribosomal protein P1-like [Cucurbita maxima] >XP_022975257.1 60S acidic ribosomal protein P1-like [Cucurbita maxima] >XP_023538866.1 60S acidic ribosomal protein P1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.0 bits (445), Expect = 2.0e-40
Identity = 102/125 (81.60%), Postives = 108/125 (86.40%), Query Frame = 0


Query: 1   MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLI 60
           MSVGE+ACSYAALILYDDNIP+TAEK+A LVKAA VD  ESYW+SLFAKLAEKRNIGDLI
Sbjct: 1   MSVGEIACSYAALILYDDNIPVTAEKLATLVKAAGVD-AESYWFSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDMG 120
           +NVGAGGGA+VAAAVPAGG AGGAAAAAAPPPEEKK            EEPKEESDDDMG
Sbjct: 61  MNVGAGGGAAVAAAVPAGG-AGGAAAAAAPPPEEKK------------EEPKEESDDDMG 111

Query: 121 FSLFD 126
           FSLFD
Sbjct: 121 FSLFD 111

[Close]

BLAST of CmUC05G080460 vs. ExPASy Swiss-Prot
Match: P52855 (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-29
Identity = 85/126 (67.46%), Postives = 94/126 (74.60%), Query Frame = 0


Query: 1   MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLI 60
           M+ GE+AC YAALIL DD I ITAEKIA +VKAAN+  VESYW +LFAKL EKRN+ DLI
Sbjct: 1   MASGELACRYAALILSDDGIAITAEKIATIVKAANIK-VESYWPALFAKLLEKRNVEDLI 60

Query: 61  LNVGAGGGAS-VAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDM 120
           L+VG+GGGA+ VAAA P    AGGAAAAAAP  EEKK            EE KEESDDDM
Sbjct: 61  LSVGSGGGAAPVAAAAP----AGGAAAAAAPAVEEKK------------EEAKEESDDDM 109

Query: 121 GFSLFD 126
           GFSLFD
Sbjct: 121 GFSLFD 109

[Close]

BLAST of CmUC05G080460 vs. ExPASy Swiss-Prot
Match: Q8LEQ0 (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 5.9e-27
Identity = 79/126 (62.70%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 2   SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLIL 61
           +VGE+ACSYA +IL D+ I ITA+KIA LVKAA V  +ESYW  LFAK+AEKRN+ DLI+
Sbjct: 3   TVGELACSYAVMILEDEGIAITADKIATLVKAAGVT-IESYWPMLFAKMAEKRNVTDLIM 62

Query: 62  NVGA--GGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDM 121
           NVGA  GGGA VAAA P   AAGG AAAAAP  EEKK            +EP EESD D+
Sbjct: 63  NVGAGGGGGAPVAAAAP---AAGGGAAAAAPAAEEKK-----------KDEPAEESDGDL 113

Query: 122 GFSLFD 126
           GF LFD
Sbjct: 123 GFGLFD 113

[Close]

BLAST of CmUC05G080460 vs. ExPASy Swiss-Prot
Match: O23095 (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-25
Identity = 73/124 (58.87%), Postives = 86/124 (69.35%), Query Frame = 0


Query: 2   SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLIL 61
           +VGE+ACSYA +IL D+ I IT++KIA LVKAA V+ +ESYW  LFAK+AEKRN+ DLI+
Sbjct: 3   TVGELACSYAVMILEDEGIAITSDKIATLVKAAGVE-IESYWPMLFAKMAEKRNVTDLIM 62

Query: 62  NVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDMGF 121
           NVGAGGG   A    A  AA G AAAAAP  EEKK            +EP EESD D+GF
Sbjct: 63  NVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKK------------DEPAEESDGDLGF 113

Query: 122 SLFD 126
            LFD
Sbjct: 123 GLFD 113

[Close]

BLAST of CmUC05G080460 vs. ExPASy Swiss-Prot
Match: Q8LCW9 (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 1.4e-25
Identity = 78/126 (61.90%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 2   SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLIL 61
           +VGE+ACSYA +IL D+ I ITA+KIA LVKAA V  +ESYW  LFAK+AEKRN+ DLI+
Sbjct: 3   TVGELACSYAVMILEDEGIAITADKIATLVKAAGV-SIESYWPMLFAKMAEKRNVTDLIM 62

Query: 62  NVGA--GGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDM 121
           NVGA  GGGA VAAA PA G  GG  AAAAP  EEKK            +EP EESD D+
Sbjct: 63  NVGAGGGGGAPVAAAAPAAG--GG--AAAAPAAEEKK-----------KDEPAEESDGDL 112

Query: 122 GFSLFD 126
           GF LFD
Sbjct: 123 GFGLFD 112

[Close]

BLAST of CmUC05G080460 vs. ExPASy Swiss-Prot
Match: P50344 (60S acidic ribosomal protein P1 OS=Davidiella tassiana OX=29918 GN=CLAH12 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 7.4e-22
Identity = 68/125 (54.40%), Postives = 81/125 (64.80%), Query Frame = 0


Query: 1   MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLI 60
           MS  E+A SYAALIL D+ + ITA+K+ AL+ AA V  +E  W SLFAK  E +++ DL+
Sbjct: 1   MSAAELASSYAALILADEGLEITADKLQALISAAKVPEIEPIWTSLFAKALEGKDVKDLL 60

Query: 61  LNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDMG 120
           LNVG+GGGA+ AA    G AAGGAAA    P EEK             EE KEESDDDMG
Sbjct: 61  LNVGSGGGAAPAA---GGAAAGGAAAVLDAPAEEK------------AEEEKEESDDDMG 110

Query: 121 FSLFD 126
           F LFD
Sbjct: 121 FGLFD 110

[Close]

BLAST of CmUC05G080460 vs. ExPASy TrEMBL
Match: A0A5D3DB57 (60S acidic ribosomal protein P1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00330 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.2e-43
Identity = 105/125 (84.00%), Postives = 107/125 (85.60%), Query Frame = 0


Query: 1   MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLI 60
           MS GE+ACSYAALILYDDNIPITAEKIA LVKAANV  VESYWYSLFAKLAEKRNIGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAANVSDVESYWYSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDMG 120
           LNVGAGGGA+VAAAVPAGGAA G AAAAAPPPEEKK            EEPKEESDDDMG
Sbjct: 61  LNVGAGGGAAVAAAVPAGGAAAGGAAAAAPPPEEKK------------EEPKEESDDDMG 113

Query: 121 FSLFD 126
           FSLFD
Sbjct: 121 FSLFD 113

[Close]

BLAST of CmUC05G080460 vs. ExPASy TrEMBL
Match: A0A1S3AUG9 (60S acidic ribosomal protein P1-like OS=Cucumis melo OX=3656 GN=LOC103483111 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.2e-43
Identity = 105/125 (84.00%), Postives = 107/125 (85.60%), Query Frame = 0


Query: 1   MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLI 60
           MS GE+ACSYAALILYDDNIPITAEKIA LVKAANV  VESYWYSLFAKLAEKRNIGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAANVSDVESYWYSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDMG 120
           LNVGAGGGA+VAAAVPAGGAA G AAAAAPPPEEKK            EEPKEESDDDMG
Sbjct: 61  LNVGAGGGAAVAAAVPAGGAAAGGAAAAAPPPEEKK------------EEPKEESDDDMG 113

Query: 121 FSLFD 126
           FSLFD
Sbjct: 121 FSLFD 113

[Close]

BLAST of CmUC05G080460 vs. ExPASy TrEMBL
Match: A0A6J1CS45 (60S acidic ribosomal protein P1-like OS=Momordica charantia OX=3673 GN=LOC111013791 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.1e-43
Identity = 103/125 (82.40%), Postives = 108/125 (86.40%), Query Frame = 0


Query: 1   MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLI 60
           MS  E+ACSYAA+ILYDD I ITAEKIAALVKAANV GV+SYWYSLFAKLAEKRNIGDLI
Sbjct: 1   MSTAEIACSYAAMILYDDGISITAEKIAALVKAANVSGVDSYWYSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDMG 120
           +NVGAGGGA+VAAAVPAGGAAGGAAAAAAPPPEEKK            EEPKEESDDDMG
Sbjct: 61  MNVGAGGGAAVAAAVPAGGAAGGAAAAAAPPPEEKK------------EEPKEESDDDMG 113

Query: 121 FSLFD 126
           FSLFD
Sbjct: 121 FSLFD 113

[Close]

BLAST of CmUC05G080460 vs. ExPASy TrEMBL
Match: A0A0A0L5M7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116860 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.9e-42
Identity = 102/125 (81.60%), Postives = 105/125 (84.00%), Query Frame = 0


Query: 1   MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLI 60
           MS GE+ACSYAALILYDDNIPITAEKIA LVKAA V  VESYWY LFAKLAEKR+IGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLI 60

Query: 61  LNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDMG 120
           LNVGAGGGA+VAAA PAGGAAGG AAAAAPPPEEKK            EEPKEESDDDMG
Sbjct: 61  LNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKK------------EEPKEESDDDMG 113

Query: 121 FSLFD 126
           FSLFD
Sbjct: 121 FSLFD 113

[Close]

BLAST of CmUC05G080460 vs. ExPASy TrEMBL
Match: A0A6J1ICK4 (60S acidic ribosomal protein P1-like OS=Cucurbita maxima OX=3661 GN=LOC111474378 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 9.7e-41
Identity = 102/125 (81.60%), Postives = 108/125 (86.40%), Query Frame = 0


Query: 1   MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLI 60
           MSVGE+ACSYAALILYDDNIP+TAEK+A LVKAA VD  ESYW+SLFAKLAEKRNIGDLI
Sbjct: 1   MSVGEIACSYAALILYDDNIPVTAEKLATLVKAAGVD-AESYWFSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDMG 120
           +NVGAGGGA+VAAAVPAGG AGGAAAAAAPPPEEKK            EEPKEESDDDMG
Sbjct: 61  MNVGAGGGAAVAAAVPAGG-AGGAAAAAAPPPEEKK------------EEPKEESDDDMG 111

Query: 121 FSLFD 126
           FSLFD
Sbjct: 121 FSLFD 111

[Close]

BLAST of CmUC05G080460 vs. TAIR 10
Match: AT5G47700.1 (60S acidic ribosomal protein family )

HSP 1 Score: 121.7 bits (304), Expect = 4.2e-28
Identity = 79/126 (62.70%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 2   SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLIL 61
           +VGE+ACSYA +IL D+ I ITA+KIA LVKAA V  +ESYW  LFAK+AEKRN+ DLI+
Sbjct: 3   TVGELACSYAVMILEDEGIAITADKIATLVKAAGVT-IESYWPMLFAKMAEKRNVTDLIM 62

Query: 62  NVGA--GGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDM 121
           NVGA  GGGA VAAA P   AAGG AAAAAP  EEKK            +EP EESD D+
Sbjct: 63  NVGAGGGGGAPVAAAAP---AAGGGAAAAAPAAEEKK-----------KDEPAEESDGDL 113

Query: 122 GFSLFD 126
           GF LFD
Sbjct: 123 GFGLFD 113

[Close]

BLAST of CmUC05G080460 vs. TAIR 10
Match: AT5G47700.2 (60S acidic ribosomal protein family )

HSP 1 Score: 121.7 bits (304), Expect = 4.2e-28
Identity = 79/126 (62.70%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 2   SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLIL 61
           +VGE+ACSYA +IL D+ I ITA+KIA LVKAA V  +ESYW  LFAK+AEKRN+ DLI+
Sbjct: 3   TVGELACSYAVMILEDEGIAITADKIATLVKAAGVT-IESYWPMLFAKMAEKRNVTDLIM 62

Query: 62  NVGA--GGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDM 121
           NVGA  GGGA VAAA P   AAGG AAAAAP  EEKK            +EP EESD D+
Sbjct: 63  NVGAGGGGGAPVAAAAP---AAGGGAAAAAPAAEEKK-----------KDEPAEESDGDL 113

Query: 122 GFSLFD 126
           GF LFD
Sbjct: 123 GFGLFD 113

[Close]

BLAST of CmUC05G080460 vs. TAIR 10
Match: AT4G00810.1 (60S acidic ribosomal protein family )

HSP 1 Score: 117.5 bits (293), Expect = 7.9e-27
Identity = 73/124 (58.87%), Postives = 86/124 (69.35%), Query Frame = 0


Query: 2   SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLIL 61
           +VGE+ACSYA +IL D+ I IT++KIA LVKAA V+ +ESYW  LFAK+AEKRN+ DLI+
Sbjct: 3   TVGELACSYAVMILEDEGIAITSDKIATLVKAAGVE-IESYWPMLFAKMAEKRNVTDLIM 62

Query: 62  NVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDMGF 121
           NVGAGGG   A    A  AA G AAAAAP  EEKK            +EP EESD D+GF
Sbjct: 63  NVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKK------------DEPAEESDGDLGF 113

Query: 122 SLFD 126
            LFD
Sbjct: 123 GLFD 113

[Close]

BLAST of CmUC05G080460 vs. TAIR 10
Match: AT4G00810.2 (60S acidic ribosomal protein family )

HSP 1 Score: 117.5 bits (293), Expect = 7.9e-27
Identity = 73/124 (58.87%), Postives = 86/124 (69.35%), Query Frame = 0


Query: 2   SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLIL 61
           +VGE+ACSYA +IL D+ I IT++KIA LVKAA V+ +ESYW  LFAK+AEKRN+ DLI+
Sbjct: 3   TVGELACSYAVMILEDEGIAITSDKIATLVKAAGVE-IESYWPMLFAKMAEKRNVTDLIM 62

Query: 62  NVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDMGF 121
           NVGAGGG   A    A  AA G AAAAAP  EEKK            +EP EESD D+GF
Sbjct: 63  NVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKK------------DEPAEESDGDLGF 113

Query: 122 SLFD 126
            LFD
Sbjct: 123 GLFD 113

[Close]

BLAST of CmUC05G080460 vs. TAIR 10
Match: AT1G01100.1 (60S acidic ribosomal protein family )

HSP 1 Score: 117.1 bits (292), Expect = 1.0e-26
Identity = 78/126 (61.90%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 2   SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLIL 61
           +VGE+ACSYA +IL D+ I ITA+KIA LVKAA V  +ESYW  LFAK+AEKRN+ DLI+
Sbjct: 3   TVGELACSYAVMILEDEGIAITADKIATLVKAAGV-SIESYWPMLFAKMAEKRNVTDLIM 62

Query: 62  NVGA--GGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPRNDMEEPKEESDDDM 121
           NVGA  GGGA VAAA PA G  GG  AAAAP  EEKK            +EP EESD D+
Sbjct: 63  NVGAGGGGGAPVAAAAPAAG--GG--AAAAPAAEEKK-----------KDEPAEESDGDL 112

Query: 122 GFSLFD 126
           GF LFD
Sbjct: 123 GFGLFD 112

The following BLAST results are available for this feature:

BLAST of CmUC05G080460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437779.1	2.5e-43	84.00	PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo] >KAA0048820.1 60S...	[more]
XP_022144008.1	1.3e-42	82.40	60S acidic ribosomal protein P1-like [Momordica charantia]	[more]
XP_038883955.1	4.8e-42	81.60	60S acidic ribosomal protein P1-like [Benincasa hispida]	[more]
XP_004133766.1	8.1e-42	81.60	60S acidic ribosomal protein P1 [Cucumis sativus] >KGN56349.1 hypothetical prote...	[more]
XP_022974253.1	2.0e-40	81.60	60S acidic ribosomal protein P1-like [Cucurbita maxima] >XP_022975257.1 60S acid...	[more]

BLAST of CmUC05G080460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P52855	2.2e-29	67.46	60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1	[more]
Q8LEQ0	5.9e-27	62.70	60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 ...	[more]
O23095	1.1e-25	58.87	60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 ...	[more]
Q8LCW9	1.4e-25	61.90	60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 ...	[more]
P50344	7.4e-22	54.40	60S acidic ribosomal protein P1 OS=Davidiella tassiana OX=29918 GN=CLAH12 PE=1 S...	[more]

BLAST of CmUC05G080460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DB57	1.2e-43	84.00	60S acidic ribosomal protein P1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3AUG9	1.2e-43	84.00	60S acidic ribosomal protein P1-like OS=Cucumis melo OX=3656 GN=LOC103483111 PE=...	[more]
A0A6J1CS45	6.1e-43	82.40	60S acidic ribosomal protein P1-like OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A0A0L5M7	3.9e-42	81.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116860 PE=3 SV=1	[more]
A0A6J1ICK4	9.7e-41	81.60	60S acidic ribosomal protein P1-like OS=Cucurbita maxima OX=3661 GN=LOC111474378...	[more]

BLAST of CmUC05G080460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47700.1	4.2e-28	62.70	60S acidic ribosomal protein family	[more]
AT5G47700.2	4.2e-28	62.70	60S acidic ribosomal protein family	[more]
AT4G00810.1	7.9e-27	58.87	60S acidic ribosomal protein family	[more]
AT4G00810.2	7.9e-27	58.87	60S acidic ribosomal protein family	[more]
AT1G01100.1	1.0e-26	61.90	60S acidic ribosomal protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038716	Ribosomal protein P1/P2, N-terminal domain	GENE3D	1.10.10.1410		coord: 1..64 e-value: 4.3E-30 score: 105.3
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 22..124 e-value: 1.8E-17 score: 63.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..125
None	No IPR available	PANTHER	PTHR45696:SF22	60S ACIDIC RIBOSOMAL PROTEIN P1-1-RELATED	coord: 1..125
None	No IPR available	PANTHER	PTHR45696	60S ACIDIC RIBOSOMAL PROTEIN P1	coord: 1..125
None	No IPR available	CDD	cd05831	Ribosomal_P1	coord: 5..124 e-value: 7.28579E-31 score: 104.326
IPR027534	Ribosomal protein L12/P1/P2 family	HAMAP	MF_01478	Ribosomal_L12_arch	coord: 6..125 score: 13.781318

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC05G080460.1	CmUC05G080460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032147	activation of protein kinase activity
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006414	translational elongation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0030295	protein kinase activator activity
molecular_function	GO:0043021	ribonucleoprotein complex binding
molecular_function	GO:0003735	structural constituent of ribosome