CmUC05G080310 (gene) Watermelon (USVL531) v1

Overview
NameCmUC05G080310
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionWRKY domain-containing protein
LocationCmU531Chr05: 135646 .. 137777 (+)
RNA-Seq ExpressionCmUC05G080310
SyntenyCmUC05G080310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTAATTTAAGGGAAGAATATAATAAGTTTGAAAACATTCCTTTTCTCATTTACTCGTACGTTGACCCAAACAGCACACCCAGAGCAAAGGTAAAAATTAGAAAAATAGAAAAGTAGAGGAGGGAAGGGGAAGACTGAAGAGGATCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTATTTGTTTGGGGTTTGGGTTTGCTTTTGCTTTGCTTTGTTGCGCTCACTTTCCTTGTTATAATCATATTGTGAAAGACGAATAATGGAAACTGGATCCCAAAGATCATCAGGGCGAGGGCAGGTTGTTCCCAATATCAATTATCAAGTTCAAGTGTCGTTCCATCTCTCAAATGCACCGCATGATCCCCAGCCCATCCAGGAAATGGGATTCGTGCAATTGGAAGAGCAGAGCCAGGTTTTGAGCTTCTTGGCACCAAATAACGCCGCCATGCCACCTGCCTTTACTAACCCTACTACTTCTGCTCACACCTCACACCTCCTGCCTCGACCTTCTTGGAGTTCACAACAGCAGGTACGCTGCTGTATTATTATTTACTTTACTTATATATGTTTCTTAATTATATTAATTAGTAAGGGTTAGTAATTCCGATCCCATCAGGTGGGCGGAACAGTGGATCCGAAGGCCGGGAACGAGGAAAACTGCACGGGTAGTGCTAGTGACGGCAGCAATTCATGGTATACAAATAGAATACAACAACCCTAATTAATTAATTCCCTAGCTACGTACACAACTTTCATATTGTAATATTGTTTAATTTGCATAGGTAGCTAGGAATATGAATATGAATATGAATGATGATCCTGTGTGCACTGCGCAGGTGGAGAAACACAAACCCAGATAAGAGTAAGGTGAAGGTGAGGAGAAAGCTGAGAGAGCCGCGTTTCTGTTTCCAGACCAGAAGCGATGTAGATGTCCTCGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTCGTCAAGAACAGCCTTCATCCTAGGTACCATATGCACCAACTGCTACTTCTACTTCTACTGCCGCCCAAACCCTATCCAATTTCATCCTAACTTTTACTTCTTTCTACTTCACGATTACATATTACAAATGTTCATACTAAATTAATTAAAGGCATGCGGATTCTCATAACTTGCATTGCATTGCATTGTATGATAGAGTTGTTCATTCATTAGTCGATAAGGGGAAGTAGATCAGACAAATAATGCACCAATCGGAATGAAAACAATCGATTAGTTAGTATAGAAAATAGGAATATACACATATACATATACATAGAAAGAGAGAGAGAGAGAAAGAGGGTAATTAATTAATAATTATGAGAAAGAGAGAAATAATAATGGAAGTGAGGGGGGGGGGGGGGGGGGTTTGGGGTAGTTCACAGTTCAGTTTCAGTAGTAGGCAGATTGGGAATGATTATGTTATATTCTCTCGCCAGGGCCATCATTATTGGTTTGGGTTTATGGTTAGAACTACCAGTCATCCATATATTCTCTTCTGTTTATAATTTTGACTACTACTCATCCATCTGCACAACACAACATATATATATATATATATATATATATATATATACACATTTATTTTTTTTTGTTTGTTTGGTTCCCTTTATCCACCTTTCATCTTCAGTCTAATCTCAGTAATGTAATGTTGATTAATTTTGAATTAATTAAATTTGCAGAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGAGTGGAGAGACTGTCGGAGGATTGCCGGATGGTGATAACCACCTACGAAGGTAGACACAACCACTCTCCTTGCGACGACTCCAATTCTTCAGAGCACGAACCCTTTACATCCTTCTGACTTCCATTTTTATTTTTATATTTCTTTTCTTATATCCTGCTGCCATCCTAATTTCATTTCCCCCTTCCCTTTCCTTTCCTTTAATTTCCTTTGCTTGTATAATAATAATAATTATTATTATTATTATTTCTTTAACTTTCTAAGCAAAATATCTGCTAGCTTCTCTGTATTTATTTGTTTAGAGATAAGACGCACATGAGAATATGAGATGGATTCCACTCCATTCCAATTTCTACCTATCCTATTAGTTCC

mRNA sequence

GTTAATTTAAGGGAAGAATATAATAAGTTTGAAAACATTCCTTTTCTCATTTACTCGTACGTTGACCCAAACAGCACACCCAGAGCAAAGGTAAAAATTAGAAAAATAGAAAAGTAGAGGAGGGAAGGGGAAGACTGAAGAGGATCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTATTTGTTTGGGGTTTGGGTTTGCTTTTGCTTTGCTTTGTTGCGCTCACTTTCCTTGTTATAATCATATTGTGAAAGACGAATAATGGAAACTGGATCCCAAAGATCATCAGGGCGAGGGCAGGTTGTTCCCAATATCAATTATCAAGTTCAAGTGTCGTTCCATCTCTCAAATGCACCGCATGATCCCCAGCCCATCCAGGAAATGGGATTCGTGCAATTGGAAGAGCAGAGCCAGGTTTTGAGCTTCTTGGCACCAAATAACGCCGCCATGCCACCTGCCTTTACTAACCCTACTACTTCTGCTCACACCTCACACCTCCTGCCTCGACCTTCTTGGAGTTCACAACAGCAGGTGGGCGGAACAGTGGATCCGAAGGCCGGGAACGAGGAAAACTGCACGGGTAGTGCTAGTGACGGCAGCAATTCATGGTGGAGAAACACAAACCCAGATAAGAGTAAGGTGAAGGTGAGGAGAAAGCTGAGAGAGCCGCGTTTCTGTTTCCAGACCAGAAGCGATGTAGATGTCCTCGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTCGTCAAGAACAGCCTTCATCCTAGGCATGCGGATTCTCATAACTTGCATTGCATTGCATTAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGAGTGGAGAGACTGTCGGAGGATTGCCGGATGGTGATAACCACCTACGAAGGTAGACACAACCACTCTCCTTGCGACGACTCCAATTCTTCAGAGCACGAACCCTTTACATCCTTCTGACTTCCATTTTTATTTTTATATTTCTTTTCTTATATCCTGCTGCCATCCTAATTTCATTTCCCCCTTCCCTTTCCTTTCCTTTAATTTCCTTTGCTTGTATAATAATAATAATTATTATTATTATTATTTCTTTAACTTTCTAAGCAAAATATCTGCTAGCTTCTCTGTATTTATTTGTTTAGAGATAAGACGCACATGAGAATATGAGATGGATTCCACTCCATTCCAATTTCTACCTATCCTATTAGTTCC

Coding sequence (CDS)

ATGGAAACTGGATCCCAAAGATCATCAGGGCGAGGGCAGGTTGTTCCCAATATCAATTATCAAGTTCAAGTGTCGTTCCATCTCTCAAATGCACCGCATGATCCCCAGCCCATCCAGGAAATGGGATTCGTGCAATTGGAAGAGCAGAGCCAGGTTTTGAGCTTCTTGGCACCAAATAACGCCGCCATGCCACCTGCCTTTACTAACCCTACTACTTCTGCTCACACCTCACACCTCCTGCCTCGACCTTCTTGGAGTTCACAACAGCAGGTGGGCGGAACAGTGGATCCGAAGGCCGGGAACGAGGAAAACTGCACGGGTAGTGCTAGTGACGGCAGCAATTCATGGTGGAGAAACACAAACCCAGATAAGAGTAAGGTGAAGGTGAGGAGAAAGCTGAGAGAGCCGCGTTTCTGTTTCCAGACCAGAAGCGATGTAGATGTCCTCGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTCGTCAAGAACAGCCTTCATCCTAGGCATGCGGATTCTCATAACTTGCATTGCATTGCATTAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGAGTGGAGAGACTGTCGGAGGATTGCCGGATGGTGATAACCACCTACGAAGGTAGACACAACCACTCTCCTTGCGACGACTCCAATTCTTCAGAGCACGAACCCTTTACATCCTTCTGA

Protein sequence

METGSQRSSGRGQVVPNINYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAPNNAAMPPAFTNPTTSAHTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGSNSWWRNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRHADSHNLHCIALSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF
Homology
BLAST of CmUC05G080310 vs. NCBI nr
Match: XP_038902624.1 (probable WRKY transcription factor 12 [Benincasa hispida])

HSP 1 Score: 360.9 bits (925), Expect = 8.2e-96
Identity = 191/243 (78.60%), Postives = 201/243 (82.72%), Query Frame = 0

Query: 1   METGSQ--RSSGRGQVVPNINYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAP 60
           METGSQ   SSGRGQ   N NYQ+QVSFHLSN   DPQ I EMGFVQLEE+SQVLSFLAP
Sbjct: 1   METGSQTLTSSGRGQAPNNTNYQLQVSFHLSN---DPQHIHEMGFVQLEEESQVLSFLAP 60

Query: 61  --NNAAMPPA---FTNPTTSAHT-SHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDG 120
             NNA MPPA    T  TTSAH+ SH++ RPSWS+ Q   GT+DPK GNE+NCTGSA +G
Sbjct: 61  NNNNATMPPAAPFTTTTTTSAHSHSHIVARPSWSNHQV--GTMDPKGGNEDNCTGSAGEG 120

Query: 121 SNSWWRNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRHA 180
           +NSWWRNTN DKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR  
Sbjct: 121 TNSWWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR-- 180

Query: 181 DSHNLHCIALSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPF 236
                     SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPF
Sbjct: 181 ----------SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPF 226

BLAST of CmUC05G080310 vs. NCBI nr
Match: KAG6582732.1 (putative WRKY transcription factor 12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020675.1 putative WRKY transcription factor 12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 344.4 bits (882), Expect = 8.0e-91
Identity = 181/238 (76.05%), Postives = 196/238 (82.35%), Query Frame = 0

Query: 1   METGSQRSSGRGQVVPNINYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAPNN 60
           METGSQ S      +P  +YQ+Q+SFHLSNAP  PQPI +MGFV +++ +QVLSFL+PN 
Sbjct: 1   METGSQISG-----LP--SYQLQLSFHLSNAPPLPQPIHQMGFVHVQDHTQVLSFLSPNT 60

Query: 61  AA---MPPAFTNPTTSAHTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGSNSWW 120
           AA   MPPAF   TTSAH +HL+ RPSWS++Q   GT DPK GN+ENC GSASDGSNSWW
Sbjct: 61  AATATMPPAF---TTSAH-AHLVSRPSWSNEQV--GTQDPKPGNDENCNGSASDGSNSWW 120

Query: 121 RNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRHADSHNL 180
           RNTN DKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR       
Sbjct: 121 RNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR------- 180

Query: 181 HCIALSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 236
                SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF
Sbjct: 181 -----SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 213

BLAST of CmUC05G080310 vs. NCBI nr
Match: XP_022924619.1 (probable WRKY transcription factor 12 [Cucurbita moschata])

HSP 1 Score: 344.0 bits (881), Expect = 1.0e-90
Identity = 181/238 (76.05%), Postives = 195/238 (81.93%), Query Frame = 0

Query: 1   METGSQRSSGRGQVVPNINYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAPNN 60
           METGSQ S      +P  +YQ+Q+SFHLSNAP  PQPI +MGFV  ++ +QVLSFL+PN 
Sbjct: 1   METGSQISG-----LP--SYQLQLSFHLSNAPPLPQPIHQMGFVHFQDHTQVLSFLSPNT 60

Query: 61  AA---MPPAFTNPTTSAHTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGSNSWW 120
           AA   MPPAF   TTSAH +HL+ RPSWS++Q   GT DPK GN+ENC GSASDGSNSWW
Sbjct: 61  AATATMPPAF---TTSAH-AHLVSRPSWSNEQV--GTQDPKPGNDENCNGSASDGSNSWW 120

Query: 121 RNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRHADSHNL 180
           RNTN DKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR       
Sbjct: 121 RNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR------- 180

Query: 181 HCIALSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 236
                SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF
Sbjct: 181 -----SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 213

BLAST of CmUC05G080310 vs. NCBI nr
Match: XP_022979595.1 (probable WRKY transcription factor 12 [Cucurbita maxima])

HSP 1 Score: 342.8 bits (878), Expect = 2.3e-90
Identity = 180/238 (75.63%), Postives = 196/238 (82.35%), Query Frame = 0

Query: 1   METGSQRSSGRGQVVPNINYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAPNN 60
           METGSQ S      +P  +YQ+Q+SFHLSNAP  PQPI +MGFV  ++ +QVLSFL+PN+
Sbjct: 1   METGSQISG-----LP--SYQLQLSFHLSNAPPLPQPIHQMGFVHFQDHTQVLSFLSPNS 60

Query: 61  AA---MPPAFTNPTTSAHTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGSNSWW 120
           AA   MPPAF   TTSAH +HL+ RPSWS++Q   GT DPK GN+ENC GSASDGSNSWW
Sbjct: 61  AATATMPPAF---TTSAH-AHLISRPSWSNEQV--GTQDPKPGNDENCNGSASDGSNSWW 120

Query: 121 RNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRHADSHNL 180
           R+TN DKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR       
Sbjct: 121 RSTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR------- 180

Query: 181 HCIALSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 236
                SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF
Sbjct: 181 -----SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 213

BLAST of CmUC05G080310 vs. NCBI nr
Match: XP_023527795.1 (probable WRKY transcription factor 12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 341.7 bits (875), Expect = 5.2e-90
Identity = 179/238 (75.21%), Postives = 195/238 (81.93%), Query Frame = 0

Query: 1   METGSQRSSGRGQVVPNINYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAPNN 60
           METGSQ S      +P  +YQ+Q+SFHLSNAP  PQPI +MGFV  ++ +QVLSFL+PN 
Sbjct: 1   METGSQISG-----LP--SYQLQLSFHLSNAPPLPQPIHQMGFVHFQDHTQVLSFLSPNT 60

Query: 61  AA---MPPAFTNPTTSAHTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGSNSWW 120
           AA   MPPAF   TTSAH +HL+ RPSWS++Q   GT DPK GN+ENC GSASDG+NSWW
Sbjct: 61  AATATMPPAF---TTSAH-AHLVSRPSWSNEQV--GTQDPKPGNDENCNGSASDGNNSWW 120

Query: 121 RNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRHADSHNL 180
           RNTN DKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR       
Sbjct: 121 RNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR------- 180

Query: 181 HCIALSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 236
                SYYRCTH+NCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF
Sbjct: 181 -----SYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 213

BLAST of CmUC05G080310 vs. ExPASy Swiss-Prot
Match: Q93WY4 (Probable WRKY transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=WRKY12 PE=1 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 8.4e-51
Identity = 117/221 (52.94%), Postives = 147/221 (66.52%), Query Frame = 0

Query: 25  SFHLSNAPHDPQPIQE-MGFVQLEEQSQVLSFLAPNNAA--MPPAFTNPTTSAHTSHLLP 84
           ++ L         IQE M F+   E++ VL+F + ++++    P+F    +S+ T+   P
Sbjct: 11  NYDLQQVTSSSTTIQENMNFLVPFEETNVLTFFSSSSSSSLSSPSFPIHNSSSTTTTHAP 70

Query: 85  RPSWSSQQQVGGTVDPKAGN--EENCTGSASDG--SNSWWRNTNPD---KSKVKVRRKLR 144
              +S+  Q GG +  K  N  +EN  G  ++   SNSWWR+ +     K+KVK+RRKLR
Sbjct: 71  L-GFSNNLQGGGPLGSKVVNDDQENFGGGTNNDAHSNSWWRSNSGSGDMKNKVKIRRKLR 130

Query: 145 EPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRHADSHNLHCIALSYYRCTHSNCRV 204
           EPRFCFQT+SDVDVLDDGYKWRKYGQKVVKNSLHPR            SYYRCTH+NCRV
Sbjct: 131 EPRFCFQTKSDVDVLDDGYKWRKYGQKVVKNSLHPR------------SYYRCTHNNCRV 190

Query: 205 KKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 236
           KKRVERLSEDCRMVITTYEGRHNH P DDS S +H+  +SF
Sbjct: 191 KKRVERLSEDCRMVITTYEGRHNHIPSDDSTSPDHDCLSSF 218

BLAST of CmUC05G080310 vs. ExPASy Swiss-Prot
Match: Q9SVB7 (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=WRKY13 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.5e-33
Identity = 74/116 (63.79%), Postives = 85/116 (73.28%), Query Frame = 0

Query: 126 KVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRHADSHNLHCIALSYY 185
           K+K RRK+REPRFCF+T S+VDVLDDGY+WRKYGQKVVKN+ HPR            SYY
Sbjct: 199 KLKTRRKVREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPR------------SYY 258

Query: 186 RCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPC----DDSNSSE--HEPFTSF 236
           RCT   CRVKKRVERL++D RMVITTYEGRH HSP     DDS S+   H P ++F
Sbjct: 259 RCTQDKCRVKKRVERLADDPRMVITTYEGRHLHSPSNHLDDDSLSTSHLHPPLSNF 302

BLAST of CmUC05G080310 vs. ExPASy Swiss-Prot
Match: Q9C983 (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana OX=3702 GN=WRKY57 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.3e-24
Identity = 68/151 (45.03%), Postives = 84/151 (55.63%), Query Frame = 0

Query: 68  TNPTTSAHTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGSNSWWRNTNPDKSKV 127
           T  T+S  +S  +     S+      T        EN T SA            P K K 
Sbjct: 69  TTVTSSCSSSAAVSVAVTSTNNNPSATSSSSEDPAENSTASAEKTPPP----ETPVKEKK 128

Query: 128 KVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRHADSHNLHCIALSYYRC 187
           K ++++R+PRF F T+SDVD L+DGY+WRKYGQK VKNS  PR            SYYRC
Sbjct: 129 KAQKRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPR------------SYYRC 188

Query: 188 THSNCRVKKRVERLSEDCRMVITTYEGRHNH 219
           T+S C VKKRVER S+D  +VITTYEG+H H
Sbjct: 189 TNSRCTVKKRVERSSDDPSIVITTYEGQHCH 203

BLAST of CmUC05G080310 vs. ExPASy Swiss-Prot
Match: Q8VWQ4 (Probable WRKY transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=WRKY56 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.3e-24
Identity = 62/116 (53.45%), Postives = 75/116 (64.66%), Query Frame = 0

Query: 107 GSASDGSNSWWRNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNS 166
           G  S+ SN+   N N +K K K  R L   R  F TRSD DVLDDGY+WRKYGQK VKN+
Sbjct: 73  GLVSNNSNNSDHNKNCNKGKGK--RTLAMQRIAFHTRSDDDVLDDGYRWRKYGQKSVKNN 132

Query: 167 LHPRHADSHNLHCIALSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCD 223
            HPR            SYYRCT+  C VKK+V+RL++D  +V+TTYEG HNH PC+
Sbjct: 133 AHPR------------SYYRCTYHTCNVKKQVQRLAKDPNVVVTTYEGVHNH-PCE 173

BLAST of CmUC05G080310 vs. ExPASy Swiss-Prot
Match: Q8GY11 (Probable WRKY transcription factor 43 OS=Arabidopsis thaliana OX=3702 GN=WRKY43 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.9e-24
Identity = 53/93 (56.99%), Postives = 68/93 (73.12%), Query Frame = 0

Query: 131 RKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRHADSHNLHCIALSYYRCTHS 190
           +K++ PRF F+T+SD D+LDDGY+WRKYGQK VKNSL+PR            SYYRCT  
Sbjct: 11  KKMKNPRFSFRTKSDADILDDGYRWRKYGQKSVKNSLYPR------------SYYRCTQH 70

Query: 191 NCRVKKRVERLSEDCRMVITTYEGRHNHSPCDD 224
            C VKK+V+RLS++  +V TTYEG HNH PC++
Sbjct: 71  MCNVKKQVQRLSKETSIVETTYEGIHNH-PCEE 90

BLAST of CmUC05G080310 vs. ExPASy TrEMBL
Match: A0A6J1E9P8 (probable WRKY transcription factor 12 OS=Cucurbita moschata OX=3662 GN=LOC111432053 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 5.0e-91
Identity = 181/238 (76.05%), Postives = 195/238 (81.93%), Query Frame = 0

Query: 1   METGSQRSSGRGQVVPNINYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAPNN 60
           METGSQ S      +P  +YQ+Q+SFHLSNAP  PQPI +MGFV  ++ +QVLSFL+PN 
Sbjct: 1   METGSQISG-----LP--SYQLQLSFHLSNAPPLPQPIHQMGFVHFQDHTQVLSFLSPNT 60

Query: 61  AA---MPPAFTNPTTSAHTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGSNSWW 120
           AA   MPPAF   TTSAH +HL+ RPSWS++Q   GT DPK GN+ENC GSASDGSNSWW
Sbjct: 61  AATATMPPAF---TTSAH-AHLVSRPSWSNEQV--GTQDPKPGNDENCNGSASDGSNSWW 120

Query: 121 RNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRHADSHNL 180
           RNTN DKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR       
Sbjct: 121 RNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR------- 180

Query: 181 HCIALSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 236
                SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF
Sbjct: 181 -----SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 213

BLAST of CmUC05G080310 vs. ExPASy TrEMBL
Match: A0A6J1ITQ6 (probable WRKY transcription factor 12 OS=Cucurbita maxima OX=3661 GN=LOC111479277 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 1.1e-90
Identity = 180/238 (75.63%), Postives = 196/238 (82.35%), Query Frame = 0

Query: 1   METGSQRSSGRGQVVPNINYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAPNN 60
           METGSQ S      +P  +YQ+Q+SFHLSNAP  PQPI +MGFV  ++ +QVLSFL+PN+
Sbjct: 1   METGSQISG-----LP--SYQLQLSFHLSNAPPLPQPIHQMGFVHFQDHTQVLSFLSPNS 60

Query: 61  AA---MPPAFTNPTTSAHTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGSNSWW 120
           AA   MPPAF   TTSAH +HL+ RPSWS++Q   GT DPK GN+ENC GSASDGSNSWW
Sbjct: 61  AATATMPPAF---TTSAH-AHLISRPSWSNEQV--GTQDPKPGNDENCNGSASDGSNSWW 120

Query: 121 RNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRHADSHNL 180
           R+TN DKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR       
Sbjct: 121 RSTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR------- 180

Query: 181 HCIALSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 236
                SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF
Sbjct: 181 -----SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 213

BLAST of CmUC05G080310 vs. ExPASy TrEMBL
Match: A0A5D3DB42 (Putative WRKY transcription factor 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00120 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.4e-88
Identity = 180/243 (74.07%), Postives = 193/243 (79.42%), Query Frame = 0

Query: 1   METG--SQRSSGRGQVVPNINYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAP 60
           METG  +QRSSGRG+     +Y+VQVSFHLSN PH    I EMGFVQLEE SQVLSFLAP
Sbjct: 1   METGTQTQRSSGRGE-----DYEVQVSFHLSNDPHH---IHEMGFVQLEEHSQVLSFLAP 60

Query: 61  NN------AAMPPAFTNPTTSAHTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDG 120
           NN         PP FT  TTS H S++LPRP   +  Q+ GT+DPK GN+ENCT +A+D 
Sbjct: 61  NNNNNNATNMPPPPFT--TTSPH-SNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDA 120

Query: 121 SNSWWRNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRHA 180
           +NSWWRNTN DKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR  
Sbjct: 121 TNSWWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR-- 180

Query: 181 DSHNLHCIALSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPF 236
                     SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPF
Sbjct: 181 ----------SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPF 220

BLAST of CmUC05G080310 vs. ExPASy TrEMBL
Match: A0A1S3AVD7 (probable WRKY transcription factor 12 OS=Cucumis melo OX=3656 GN=LOC103483097 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.4e-88
Identity = 180/243 (74.07%), Postives = 193/243 (79.42%), Query Frame = 0

Query: 1   METG--SQRSSGRGQVVPNINYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAP 60
           METG  +QRSSGRG+     +Y+VQVSFHLSN PH    I EMGFVQLEE SQVLSFLAP
Sbjct: 1   METGTQTQRSSGRGE-----DYEVQVSFHLSNDPHH---IHEMGFVQLEEHSQVLSFLAP 60

Query: 61  NN------AAMPPAFTNPTTSAHTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDG 120
           NN         PP FT  TTS H S++LPRP   +  Q+ GT+DPK GN+ENCT +A+D 
Sbjct: 61  NNNNNNATNMPPPPFT--TTSPH-SNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDA 120

Query: 121 SNSWWRNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRHA 180
           +NSWWRNTN DKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR  
Sbjct: 121 TNSWWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR-- 180

Query: 181 DSHNLHCIALSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPF 236
                     SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPF
Sbjct: 181 ----------SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPF 220

BLAST of CmUC05G080310 vs. ExPASy TrEMBL
Match: A0A0A0L3J0 (WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116700 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 2.3e-88
Identity = 179/242 (73.97%), Postives = 193/242 (79.75%), Query Frame = 0

Query: 1   METG--SQRSSGRGQVVPNINYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAP 60
           METG  +QRSSGRG+     +Y+VQVSFHLSN PH    I EMGFVQLEE SQVLSFLAP
Sbjct: 1   METGTQTQRSSGRGE-----DYEVQVSFHLSNDPHH---IHEMGFVQLEEHSQVLSFLAP 60

Query: 61  NN-----AAMPPAFTNPTTSAHTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGS 120
           NN        PP FT  TTS H S++LPRP   +  Q+ GT+DPK GN+ENCT +A+D +
Sbjct: 61  NNNNNTTNMPPPPFT--TTSPH-SNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDAT 120

Query: 121 NSWWRNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRHAD 180
           NSWWRNTN DKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR   
Sbjct: 121 NSWWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR--- 180

Query: 181 SHNLHCIALSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFT 236
                    SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNH+PCDDSNSSEHEPFT
Sbjct: 181 ---------SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFT 219

BLAST of CmUC05G080310 vs. TAIR 10
Match: AT2G44745.1 (WRKY family transcription factor )

HSP 1 Score: 201.8 bits (512), Expect = 6.0e-52
Identity = 117/221 (52.94%), Postives = 147/221 (66.52%), Query Frame = 0

Query: 25  SFHLSNAPHDPQPIQE-MGFVQLEEQSQVLSFLAPNNAA--MPPAFTNPTTSAHTSHLLP 84
           ++ L         IQE M F+   E++ VL+F + ++++    P+F    +S+ T+   P
Sbjct: 11  NYDLQQVTSSSTTIQENMNFLVPFEETNVLTFFSSSSSSSLSSPSFPIHNSSSTTTTHAP 70

Query: 85  RPSWSSQQQVGGTVDPKAGN--EENCTGSASDG--SNSWWRNTNPD---KSKVKVRRKLR 144
              +S+  Q GG +  K  N  +EN  G  ++   SNSWWR+ +     K+KVK+RRKLR
Sbjct: 71  L-GFSNNLQGGGPLGSKVVNDDQENFGGGTNNDAHSNSWWRSNSGSGDMKNKVKIRRKLR 130

Query: 145 EPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRHADSHNLHCIALSYYRCTHSNCRV 204
           EPRFCFQT+SDVDVLDDGYKWRKYGQKVVKNSLHPR            SYYRCTH+NCRV
Sbjct: 131 EPRFCFQTKSDVDVLDDGYKWRKYGQKVVKNSLHPR------------SYYRCTHNNCRV 190

Query: 205 KKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 236
           KKRVERLSEDCRMVITTYEGRHNH P DDS S +H+  +SF
Sbjct: 191 KKRVERLSEDCRMVITTYEGRHNHIPSDDSTSPDHDCLSSF 218

BLAST of CmUC05G080310 vs. TAIR 10
Match: AT4G39410.1 (WRKY DNA-binding protein 13 )

HSP 1 Score: 143.3 bits (360), Expect = 2.5e-34
Identity = 74/116 (63.79%), Postives = 85/116 (73.28%), Query Frame = 0

Query: 126 KVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRHADSHNLHCIALSYY 185
           K+K RRK+REPRFCF+T S+VDVLDDGY+WRKYGQKVVKN+ HPR            SYY
Sbjct: 199 KLKTRRKVREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPR------------SYY 258

Query: 186 RCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPC----DDSNSSE--HEPFTSF 236
           RCT   CRVKKRVERL++D RMVITTYEGRH HSP     DDS S+   H P ++F
Sbjct: 259 RCTQDKCRVKKRVERLADDPRMVITTYEGRHLHSPSNHLDDDSLSTSHLHPPLSNF 302

BLAST of CmUC05G080310 vs. TAIR 10
Match: AT1G69310.1 (WRKY DNA-binding protein 57 )

HSP 1 Score: 114.8 bits (286), Expect = 9.6e-26
Identity = 68/151 (45.03%), Postives = 84/151 (55.63%), Query Frame = 0

Query: 68  TNPTTSAHTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGSNSWWRNTNPDKSKV 127
           T  T+S  +S  +     S+      T        EN T SA            P K K 
Sbjct: 69  TTVTSSCSSSAAVSVAVTSTNNNPSATSSSSEDPAENSTASAEKTPPP----ETPVKEKK 128

Query: 128 KVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRHADSHNLHCIALSYYRC 187
           K ++++R+PRF F T+SDVD L+DGY+WRKYGQK VKNS  PR            SYYRC
Sbjct: 129 KAQKRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPR------------SYYRC 188

Query: 188 THSNCRVKKRVERLSEDCRMVITTYEGRHNH 219
           T+S C VKKRVER S+D  +VITTYEG+H H
Sbjct: 189 TNSRCTVKKRVERSSDDPSIVITTYEGQHCH 203

BLAST of CmUC05G080310 vs. TAIR 10
Match: AT1G69310.2 (WRKY DNA-binding protein 57 )

HSP 1 Score: 114.8 bits (286), Expect = 9.6e-26
Identity = 68/151 (45.03%), Postives = 84/151 (55.63%), Query Frame = 0

Query: 68  TNPTTSAHTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGSNSWWRNTNPDKSKV 127
           T  T+S  +S  +     S+      T        EN T SA            P K K 
Sbjct: 69  TTVTSSCSSSAAVSVAVTSTNNNPSATSSSSEDPAENSTASAEKTPPP----ETPVKEKK 128

Query: 128 KVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRHADSHNLHCIALSYYRC 187
           K ++++R+PRF F T+SDVD L+DGY+WRKYGQK VKNS  PR            SYYRC
Sbjct: 129 KAQKRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPR------------SYYRC 188

Query: 188 THSNCRVKKRVERLSEDCRMVITTYEGRHNH 219
           T+S C VKKRVER S+D  +VITTYEG+H H
Sbjct: 189 TNSRCTVKKRVERSSDDPSIVITTYEGQHCH 203

BLAST of CmUC05G080310 vs. TAIR 10
Match: AT1G64000.1 (WRKY DNA-binding protein 56 )

HSP 1 Score: 114.0 bits (284), Expect = 1.6e-25
Identity = 62/116 (53.45%), Postives = 75/116 (64.66%), Query Frame = 0

Query: 107 GSASDGSNSWWRNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNS 166
           G  S+ SN+   N N +K K K  R L   R  F TRSD DVLDDGY+WRKYGQK VKN+
Sbjct: 73  GLVSNNSNNSDHNKNCNKGKGK--RTLAMQRIAFHTRSDDDVLDDGYRWRKYGQKSVKNN 132

Query: 167 LHPRHADSHNLHCIALSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCD 223
            HPR            SYYRCT+  C VKK+V+RL++D  +V+TTYEG HNH PC+
Sbjct: 133 AHPR------------SYYRCTYHTCNVKKQVQRLAKDPNVVVTTYEGVHNH-PCE 173

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038902624.18.2e-9678.60probable WRKY transcription factor 12 [Benincasa hispida][more]
KAG6582732.18.0e-9176.05putative WRKY transcription factor 12, partial [Cucurbita argyrosperma subsp. so... [more]
XP_022924619.11.0e-9076.05probable WRKY transcription factor 12 [Cucurbita moschata][more]
XP_022979595.12.3e-9075.63probable WRKY transcription factor 12 [Cucurbita maxima][more]
XP_023527795.15.2e-9075.21probable WRKY transcription factor 12 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q93WY48.4e-5152.94Probable WRKY transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=WRKY12 ... [more]
Q9SVB73.5e-3363.79Probable WRKY transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=WRKY13 ... [more]
Q9C9831.3e-2445.03Probable WRKY transcription factor 57 OS=Arabidopsis thaliana OX=3702 GN=WRKY57 ... [more]
Q8VWQ42.3e-2453.45Probable WRKY transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=WRKY56 ... [more]
Q8GY113.9e-2456.99Probable WRKY transcription factor 43 OS=Arabidopsis thaliana OX=3702 GN=WRKY43 ... [more]
Match NameE-valueIdentityDescription
A0A6J1E9P85.0e-9176.05probable WRKY transcription factor 12 OS=Cucurbita moschata OX=3662 GN=LOC111432... [more]
A0A6J1ITQ61.1e-9075.63probable WRKY transcription factor 12 OS=Cucurbita maxima OX=3661 GN=LOC11147927... [more]
A0A5D3DB421.4e-8874.07Putative WRKY transcription factor 12 OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S3AVD71.4e-8874.07probable WRKY transcription factor 12 OS=Cucumis melo OX=3656 GN=LOC103483097 PE... [more]
A0A0A0L3J02.3e-8873.97WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116700 PE=4 S... [more]
Match NameE-valueIdentityDescription
AT2G44745.16.0e-5252.94WRKY family transcription factor [more]
AT4G39410.12.5e-3463.79WRKY DNA-binding protein 13 [more]
AT1G69310.19.6e-2645.03WRKY DNA-binding protein 57 [more]
AT1G69310.29.6e-2645.03WRKY DNA-binding protein 57 [more]
AT1G64000.11.6e-2553.45WRKY DNA-binding protein 56 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003657WRKY domainSMARTSM00774WRKY_clscoord: 149..220
e-value: 1.3E-34
score: 131.0
IPR003657WRKY domainPFAMPF03106WRKYcoord: 150..218
e-value: 2.9E-17
score: 62.7
IPR003657WRKY domainPROSITEPS50811WRKYcoord: 144..218
score: 24.44348
IPR036576WRKY domain superfamilyGENE3D2.20.25.80WRKY domaincoord: 136..214
e-value: 8.0E-30
score: 104.4
IPR036576WRKY domain superfamilySUPERFAMILY118290WRKY DNA-binding domaincoord: 141..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..122
NoneNo IPR availablePANTHERPTHR31221:SF137WRKY TRANSCRIPTION FACTOR 12-RELATEDcoord: 32..231
IPR044810WRKY transcription factor, plantPANTHERPTHR31221WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATEDcoord: 32..231

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC05G080310.1CmUC05G080310.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009832 plant-type cell wall biogenesis
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0043565 sequence-specific DNA binding